Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= F45E4_10
(615 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17541094|ref|NP_501245.1| high Mobility Group protein (23.4 k... 354 6e-97
gi|39593641|emb|CAE61933.1| Hypothetical protein CBG05930 [Caeno... 207 1e-52
gi|4507401|ref|NP_003192.1| transcription factor A, mitochondria... 72 6e-12
gi|47115243|emb|CAG28581.1| TFAM [Homo sapiens] 72 8e-12
gi|17221614|dbj|BAB78468.1| mitochondrial transcription factor A... 61 1e-08
gi|45383910|ref|NP_989431.1| transcription factor A, mitochondri... 61 2e-08
gi|50427099|ref|XP_462157.1| unnamed protein product [Debaryomyc... 55 8e-07
gi|23394916|gb|AAN31640.1| high mobility group protein 1; HMG1 [... 55 8e-07
gi|7488917|pir||T14286 embryogenic callus protein 98b - carrot >... 55 1e-06
gi|31220610|ref|XP_316944.1| ENSANGP00000019929 [Anopheles gambi... 52 7e-06
gi|45935025|gb|AAS79547.1| At4g11080 [Arabidopsis thaliana] >gnl... 51 2e-05
gi|34881724|ref|XP_223440.2| similar to high mobility group prot... 50 3e-05
gi|15237042|ref|NP_192846.1| high mobility group (HMG1/2) family... 50 4e-05
gi|13786148|ref|NP_112616.1| transcription factor A, mitochondr... 50 4e-05
gi|27882654|gb|AAH44009.1| Hmgb3-prov protein [Xenopus laevis] 50 4e-05
gi|9963946|gb|AAG09777.1| transcription factor A [Rattus norvegi... 50 4e-05
gi|11275990|gb|AAG33853.1| transcription factor A [Sus scrofa] 50 4e-05
gi|1016758|gb|AAA91456.1| transcription factor A 49 8e-05
gi|47124341|gb|AAH70482.1| Unknown (protein for MGC:90319) [Homo... 49 8e-05
gi|45360483|ref|NP_988904.1| hypothetical protein MGC75666 [Xeno... 49 8e-05
gi|24648444|ref|NP_732527.1| CG4217-PB [Drosophila melanogaster]... 48 2e-04
gi|4885421|ref|NP_005333.1| high-mobility group box 3; high-mobi... 48 2e-04
gi|17738065|ref|NP_524415.1| CG4217-PA [Drosophila melanogaster]... 47 3e-04
gi|6678303|ref|NP_033386.1| transcription factor A, mitochondria... 47 4e-04
gi|22654148|sp|Q91ZW1|TFAM_RAT Transcription factor A, mitochond... 47 4e-04
gi|47211316|emb|CAF92109.1| unnamed protein product [Tetraodon n... 47 4e-04
gi|1575501|gb|AAC52816.1| mitochondrial transcription factor A 47 4e-04
gi|18420676|ref|NP_568431.1| high mobility group (HMG1/2) family... 46 5e-04
gi|9759080|dbj|BAB09558.1| unnamed protein product [Arabidopsis ... 46 5e-04
gi|2137383|pir||I49745 HMG box protein - mouse >gnl|BL_ORD_ID|95... 46 5e-04
gi|47497872|dbj|BAD20056.1| putative embryogenic callus protein ... 46 6e-04
gi|29841393|gb|AAP06425.1| similar to HMG1-like protein - fruit ... 46 6e-04
gi|47227840|emb|CAG09003.1| unnamed protein product [Tetraodon n... 45 8e-04
gi|41147234|ref|XP_371791.1| similar to High mobility group prot... 45 0.001
gi|32419058|ref|XP_330007.1| hypothetical protein [Neurospora cr... 44 0.002
gi|15236607|ref|NP_194111.1| high mobility group (HMG1/2) family... 44 0.002
gi|6755740|ref|NP_035681.1| upstream binding transcription facto... 44 0.002
gi|37547219|ref|XP_065445.2| similar to autoantigen NOR-90 [Homo... 44 0.002
gi|16033552|gb|AAL13284.1| high mobility group protein [Naegleri... 44 0.002
gi|41149025|ref|XP_373290.1| similar to high mobility group prot... 44 0.003
gi|45198302|ref|NP_985331.1| AFL219Wp [Eremothecium gossypii] >g... 44 0.003
gi|50256205|gb|EAL18932.1| hypothetical protein CNBI1930 [Crypto... 43 0.004
gi|50418158|gb|AAH78230.1| Unknown (protein for IMAGE:7155913) [... 43 0.005
gi|7657671|ref|NP_055048.1| upstream binding transcription facto... 43 0.005
gi|34873894|ref|XP_340914.1| transcription factor UBF [Rattus no... 43 0.005
gi|12836542|dbj|BAB23701.1| unnamed protein product [Mus musculus] 43 0.005
gi|112465|pir||B40439 UBF transcription factor, short form - rat 43 0.005
gi|105397|pir||S18193 autoantigen NOR-90 - human >gnl|BL_ORD_ID|... 43 0.005
gi|1916615|gb|AAC51239.1| ribosomal RNA upstream binding transcr... 43 0.005
gi|27370889|gb|AAH41262.1| MGC52825 protein [Xenopus laevis] 42 0.007
gi|23619511|ref|NP_705473.1| high mobility group protein 4, puta... 42 0.009
gi|1045008|gb|AAB38418.1| putative [Cricetulus griseus] 42 0.009
gi|2137073|pir||JC5112 ribosomal transcription factor UBF1 - Chi... 42 0.009
gi|2137074|pir||JC5113 ribosomal transcription factor UBF2 - Chi... 42 0.009
gi|1045010|gb|AAB38419.1| putative [Cricetulus griseus] 42 0.009
gi|46326208|gb|AAS88235.1| high mobility group B1 protein [Schis... 42 0.012
gi|41055925|ref|NP_957297.1| similar to transcription factor UBF... 42 0.012
gi|37779034|gb|AAP20177.1| high mobility group protein [Pagrus m... 41 0.016
gi|22204249|emb|CAD43431.1| SI:dZ180G5.3 (novel protein similar ... 41 0.016
gi|37539781|ref|XP_092553.2| similar to autoantigen NOR-90 [Homo... 41 0.016
gi|40365359|gb|AAR85353.1| high mobility group B1 protein [Schis... 41 0.016
gi|541968|pir||S40122 high mobility group protein HMG-1 - garden... 41 0.016
gi|38637289|dbj|BAD03552.1| putative HMG type nucleosome/chromat... 41 0.021
gi|123379|sp|P26585|HMGL_SOYBN HMG1/2-like protein (SB11 protein... 41 0.021
gi|7446226|pir||T03372 high mobility group protein HMGc1 - maize... 41 0.021
gi|49068268|ref|XP_398423.1| hypothetical protein UM00808.1 [Ust... 40 0.027
gi|6322820|ref|NP_012893.1| intrastrand crosslink recognition pr... 40 0.035
gi|37541473|ref|XP_061888.2| similar to autoantigen NOR-90 [Homo... 40 0.035
gi|729737|sp|P40620|HMGL_VICFA HMG1/2-like protein >gnl|BL_ORD_I... 40 0.035
gi|311109|gb|AAA02859.1| intrastrand crosslink recognition protein 40 0.035
gi|17017394|gb|AAL33651.1| HMG-like nucleosome/chromatin assembl... 40 0.035
gi|47212472|emb|CAF90268.1| unnamed protein product [Tetraodon n... 40 0.046
gi|50256654|gb|EAL19377.1| hypothetical protein CNBH0700 [Crypto... 40 0.046
gi|50309549|ref|XP_454785.1| unnamed protein product [Kluyveromy... 39 0.060
gi|136655|sp|P25979|UBF1_XENLA Nucleolar transcription factor 1 ... 39 0.060
gi|18700443|dbj|BAB85204.1| high mobility group box protein 2 [O... 39 0.060
gi|47217456|emb|CAG10225.1| unnamed protein product [Tetraodon n... 39 0.060
gi|1085210|pir||S48708 high-mobility-group-1 protein - trout 39 0.060
gi|50310255|ref|XP_455147.1| unnamed protein product [Kluyveromy... 39 0.060
gi|50251344|dbj|BAD28320.1| putative high mobility group protein... 39 0.078
gi|609551|gb|AAA58771.1| HMG-1 39 0.078
gi|4468042|emb|CAB37859.1| unnamed protein product [Vicia faba] 39 0.078
gi|25402921|pir||F86339 protein F2D10.18 [imported] - Arabidopsi... 39 0.078
gi|27503844|gb|AAH42232.1| MGC52607 protein [Xenopus laevis] 39 0.078
gi|104205|pir||S17196 transcription factor UBF2 - African clawed... 39 0.078
gi|65265|emb|CAA42523.1| a xenopus upstream binding factor [Xeno... 39 0.078
gi|136657|sp|P25980|UBF2_XENLA Nucleolar transcription factor 2 ... 39 0.078
gi|7446227|pir||T03374 high mobility group protein HMGc2 - maize... 39 0.078
gi|37541465|ref|XP_061880.2| similar to autoantigen NOR-90 [Homo... 39 0.10
gi|47214494|emb|CAG12499.1| unnamed protein product [Tetraodon n... 39 0.10
gi|31237627|ref|XP_319644.1| ENSANGP00000013973 [Anopheles gambi... 38 0.13
gi|37541779|ref|XP_115100.2| similar to autoantigen NOR-90 [Homo... 38 0.13
gi|49259494|pdb|1V64|A Chain A, Solution Structure Of The 3rd Hm... 38 0.13
gi|49259493|pdb|1V63|A Chain A, Solution Structure Of The 6th Hm... 38 0.13
gi|50292849|ref|XP_448857.1| unnamed protein product [Candida gl... 38 0.17
gi|50307729|ref|XP_453858.1| unnamed protein product [Kluyveromy... 38 0.17
gi|548990|sp|P36395|SRY_SMIMA Sex-determining region Y protein (... 38 0.17
gi|39594141|emb|CAE70251.1| Hypothetical protein CBG16744 [Caeno... 37 0.23
gi|33415924|gb|AAQ18499.1| transcription factor Sox14b [Takifugu... 37 0.30
gi|4100557|gb|AAD04778.1| SOX14 protein [Monopterus albus] 37 0.30
gi|32330846|gb|AAP79918.1| HMG box protein Sox 14-2 [Dicentrarch... 37 0.30
gi|49080538|ref|XP_403775.1| hypothetical protein UM06160.1 [Ust... 37 0.30
gi|1052956|gb|AAC50019.1| high mobility group protein 2 HMG2 [Ip... 37 0.30
gi|32563594|ref|NP_491053.2| pop-1 protein, POsterior Pharynx de... 37 0.39
gi|50257799|gb|EAL20500.1| hypothetical protein CNBE4210 [Crypto... 37 0.39
gi|17017392|gb|AAL33650.1| HMG-like nucleosome/chromatin assembl... 37 0.39
gi|7446228|pir||T03375 high mobility group protein HMGd1 - maize... 37 0.39
gi|85591|pir||A24019 nonhistone chromosomal protein HMG-T - trou... 37 0.39
gi|6323717|ref|NP_013788.1| Mitochondrial DNA-binding protein in... 37 0.39
gi|7508893|pir||T32931 hypothetical protein W03D8.4 - Caenorhabd... 36 0.51
gi|46433232|gb|EAK92680.1| hypothetical protein CaO19.400 [Candi... 36 0.51
gi|31197513|ref|XP_307704.1| ENSANGP00000018088 [Anopheles gambi... 36 0.51
gi|31198279|ref|XP_308087.1| ENSANGP00000019758 [Anopheles gambi... 36 0.51
gi|13384579|gb|AAK21504.1| Posterior pharynx defect protein 1 [C... 36 0.51
gi|45200956|ref|NP_986526.1| AGL141Wp [Eremothecium gossypii] >g... 36 0.51
gi|39596280|emb|CAE69918.1| Hypothetical protein CBG16279 [Caeno... 36 0.51
gi|39586800|emb|CAE65843.1| Hypothetical protein CBG10974 [Caeno... 36 0.51
gi|23486495|gb|EAA20805.1| cytoplasmic dynein 1-related [Plasmod... 36 0.66
gi|2133473|pir||A57667 pop-1 protein - Caenorhabditis elegans 36 0.66
gi|23482816|gb|EAA18688.1| hypothetical protein [Plasmodium yoel... 36 0.66
gi|33415922|gb|AAQ18498.1| transcription factor Sox14a [Takifugu... 35 0.86
gi|627349|pir||A53143 testis-determining gene/SRY homolog - dunn... 35 0.86
gi|7579912|gb|AAB30154.2| testis-determining protein [Sminthopsi... 35 0.86
gi|34881805|ref|XP_346368.1| similar to SOX3 [Rattus norvegicus] 35 0.86
gi|30061556|ref|NP_005625.2| SRY (sex determining region Y)-box ... 35 0.86
gi|30024610|dbj|BAC75669.1| transcriptional factor SOX3 [Mus mus... 35 0.86
gi|38969719|gb|AAH63061.1| Sox3 protein [Mus musculus] 35 0.86
gi|6678071|ref|NP_033263.1| SRY-box containing gene 3 [Mus muscu... 35 0.86
gi|31077311|gb|EAA46437.1| GLP_93_31193_31807 [Giardia lamblia A... 35 0.86
gi|3982581|gb|AAC94969.1| SOX-25 protein [Homo sapiens] 35 0.86
gi|110951|pir||S10948 sex-determining protein - mouse (fragment)... 35 0.86
gi|34855120|ref|XP_345186.1| similar to High mobility group prot... 35 0.86
gi|2136186|pir||I38239 transcription factor SOX3 - human >gnl|BL... 35 0.86
gi|38079507|ref|XP_357446.1| similar to Ac2-008 [Mus musculus] 35 0.86
gi|39580503|emb|CAE66504.1| Hypothetical protein CBG11789 [Caeno... 35 1.1
gi|50726318|dbj|BAD33893.1| putative HMGd1 [Oryza sativa (japoni... 35 1.1
gi|24371266|ref|NP_570983.1| SRY-box containing gene 19; Zf-Sox ... 35 1.1
gi|19570868|dbj|BAB86364.1| histone-like protein [Physarum polyc... 35 1.1
gi|2447043|dbj|BAA22513.1| xSox7 protein [Xenopus laevis] 35 1.1
gi|34881606|ref|XP_346355.1| similar to RIKEN cDNA 1700001F22 [R... 35 1.1
gi|7446231|pir||T09581 probable high mobility group protein HMG1... 35 1.1
gi|729736|sp|P40619|HMGL_PHANI HMG1/2-like protein >gnl|BL_ORD_I... 35 1.1
gi|34869245|ref|XP_223847.2| similar to High mobility group prot... 35 1.1
gi|6942186|gb|AAF32348.1| Sox19 protein [Monopterus albus] >gnl|... 35 1.1
gi|21436497|gb|AAM51630.1| SOX2 [Ornithorhynchus anatinus] 35 1.1
gi|107712|pir||S22942 sex-determining protein SOX-9 - human (fra... 35 1.1
gi|7446213|pir||T02252 high mobility group protein HMG-1 - commo... 35 1.1
gi|32330844|gb|AAP79917.1| HMG box protein Sox 31-2 [Dicentrarch... 35 1.1
gi|47215961|emb|CAF96363.1| unnamed protein product [Tetraodon n... 35 1.1
gi|50418474|gb|AAH78221.1| Sox19 protein [Danio rerio] 35 1.1
gi|44829157|gb|AAS47833.1| Sox21b [Danio rerio] 35 1.5
gi|34862259|ref|XP_343154.1| similar to PDZ-domain protein Gipc3... 35 1.5
gi|33415926|gb|AAQ18500.1| transcription factor Sox21 [Takifugu ... 35 1.5
gi|47227024|emb|CAG05916.1| unnamed protein product [Tetraodon n... 35 1.5
gi|15231065|ref|NP_190756.1| high mobility group protein alpha (... 35 1.5
gi|42572635|ref|NP_974413.1| high mobility group protein alpha (... 35 1.5
gi|34876002|ref|XP_224521.2| similar to HMG-box protein SOX21 [R... 35 1.5
gi|11528488|ref|NP_034570.1| high mobility group 20 B; high mobi... 35 1.5
gi|7799120|emb|CAB90813.1| Hmg20B [Mus musculus] 35 1.5
gi|38649222|gb|AAH63054.1| Sox21 protein [Mus musculus] 35 1.5
gi|4102805|gb|AAD05377.1| Sox-10 protein [Ailuropoda melanoleuca] 35 1.5
gi|729346|sp|P40659|DM17_DROME SRY-related protein DM17 >gnl|BL_... 35 1.5
gi|107701|pir||S22937 sex-determining protein SOX-10 - human (fr... 35 1.5
gi|47228066|emb|CAF97695.1| unnamed protein product [Tetraodon n... 35 1.5
gi|7544638|gb|AAA73079.2| unknown [Saccharomyces cerevisiae] 35 1.5
gi|729738|sp|P40621|HMGL_WHEAT HMG1/2-like protein >gnl|BL_ORD_I... 35 1.5
gi|21703920|ref|NP_663439.1| SRY-box 21; DNA-binding protein SOX... 35 1.5
gi|29244252|ref|NP_808421.1| SRY-box 21; DNA-binding protein SOX... 35 1.5
gi|5902108|ref|NP_009015.1| SRY-box 21 [Homo sapiens] >gnl|BL_OR... 35 1.5
gi|950053|emb|CAA90679.1| HMG1/2-like protein [Hordeum vulgare s... 34 1.9
gi|39588150|emb|CAE68074.1| Hypothetical protein CBG13704 [Caeno... 34 1.9
gi|38090019|ref|XP_284529.2| SRY-box 14 [Mus musculus] 34 1.9
gi|3885888|gb|AAC78104.1| high mobility group protein [Oryza sat... 34 1.9
gi|31239599|ref|XP_320213.1| ENSANGP00000009009 [Anopheles gambi... 34 1.9
gi|33415918|gb|AAQ18496.1| transcription factor Sox3 [Takifugu r... 34 1.9
gi|6688924|emb|CAB65318.1| SOX3 protein [Oryzias latipes] 34 1.9
gi|32331001|gb|AAP79985.1| Sox3 [Danio rerio] 34 1.9
gi|42779929|ref|NP_977176.1| stage V sporulation protein R [Baci... 34 1.9
gi|4759162|ref|NP_004180.1| SRY-box 14; HMG box transcription fa... 34 1.9
gi|27721277|ref|XP_236605.1| similar to Transcription factor SOX... 34 1.9
gi|45382127|ref|NP_990092.1| HMG box transcription factor SOX14 ... 34 1.9
gi|21357779|ref|NP_648694.1| CG7345-PA [Drosophila melanogaster]... 34 1.9
gi|7416985|gb|AAF62396.1| HMG box transcription factor [Mus musc... 34 1.9
gi|6624099|gb|AAF19244.1|AC007277_1 similar to nonhistone chromo... 34 1.9
gi|49227215|ref|NP_001001811.1| SRY-box containing gene 3 [Danio... 34 1.9
gi|28386001|gb|AAH44735.1| Sox14 protein [Mus musculus] 34 1.9
gi|47124871|gb|AAH69948.1| Sox14 protein [Mus musculus] 34 1.9
gi|48097476|ref|XP_393793.1| similar to CG5893-PA [Apis mellifera] 34 1.9
gi|31201647|ref|XP_309771.1| ENSANGP00000012491 [Anopheles gambi... 34 1.9
gi|4102811|gb|AAD05380.1| Sox-14 protein [Ailuropoda melanoleuca] 34 1.9
gi|3982585|gb|AAC94971.1| SOX-14 protein [Homo sapiens] 34 1.9
gi|24657271|ref|NP_726106.1| CG17921-PA [Drosophila melanogaster... 34 1.9
gi|468792|emb|CAA50466.1| soxA [Homo sapiens] 34 1.9
gi|32330836|gb|AAP79913.1| HMG box protein Sox 3 [Dicentrarchus ... 34 1.9
gi|729124|sp|P40672|CH60_CHICK SRY-related protein CH60 >gnl|BL_... 34 1.9
gi|33867634|gb|AAQ55172.1| Sox1 protein [Alligator sinensis] 34 1.9
gi|468794|emb|CAA50467.1| soxB [Homo sapiens] 34 1.9
gi|33416987|gb|AAH55767.1| Sox14 protein [Mus musculus] 34 1.9
gi|729345|sp|P40658|DM10_DROME SRY-related protein DM10 >gnl|BL_... 34 1.9
gi|32481085|gb|AAP83939.1| HMG-box transcription factor Sox21a [... 34 1.9
gi|32481087|gb|AAP83940.1| HMG-box transcription factor Sox21b [... 34 1.9
gi|38047781|gb|AAR09793.1| similar to Drosophila melanogaster Hm... 34 1.9
gi|423575|pir||S30244 Sry-type HMG box protein Sox14 - mouse (fr... 34 1.9
gi|38197450|gb|AAH61722.1| Unknown (protein for MGC:72584) [Ratt... 34 1.9
gi|47225311|emb|CAG09811.1| unnamed protein product [Tetraodon n... 34 1.9
gi|40642793|emb|CAD58840.1| SoxB1 protein [Ciona intestinalis] 34 1.9
gi|21435810|gb|AAM51629.1| SOX14 [Ornithorhynchus anatinus] 34 1.9
gi|6625692|gb|AAF19353.1| SOX14 protein [Mus musculus] 34 1.9
gi|4099267|gb|AAD00563.1| transcriptional regulator Sox-21 [Dani... 34 1.9
gi|27801587|emb|CAD60660.1| SI:dZ202L16.4 (SRY-box containing ge... 34 1.9
gi|18859405|ref|NP_571361.1| SRY-box 21; SRY-box containing gene... 34 1.9
gi|33604114|gb|AAH56274.1| SRY-box 21 [Danio rerio] >gnl|BL_ORD_... 34 1.9
gi|23612663|ref|NP_704224.1| dynein heavy chain, putative [Plasm... 34 1.9
gi|37526823|ref|NP_930167.1| hypothetical protein [Photorhabdus ... 34 2.5
gi|6320379|ref|NP_010459.1| Chromatin associated high mobility g... 34 2.5
gi|34881667|ref|XP_228669.2| similar to RIKEN cDNA 1700001F22 [R... 34 2.5
gi|6634123|emb|CAB64386.1| SoxNeuro [Drosophila melanogaster] 34 2.5
gi|18394898|ref|NP_564123.1| high mobility group protein beta1 (... 34 2.5
gi|18394900|ref|NP_564124.1| high mobility group protein beta2 (... 34 2.5
gi|10443169|emb|CAC10492.1| Sox31 protein [Danio rerio] >gnl|BL_... 34 2.5
gi|50591402|ref|ZP_00332715.1| COG1074: ATP-dependent exoDNAse (... 34 2.5
gi|1255641|dbj|BAA07519.1| Sry-related HMG box sequence [Oryzias... 34 2.5
gi|104256|pir||S22946 SOX-11 protein - African clawed frog (frag... 34 2.5
gi|3982587|gb|AAC94972.1| SOX-27 protein [Homo sapiens] 34 2.5
gi|32330832|gb|AAP79911.1| HMG box protein Sox 1-2 [Dicentrarchu... 34 2.5
gi|1255639|dbj|BAA07518.1| Sry-related HMG box sequence [Oryzias... 34 2.5
gi|4100553|gb|AAD04776.1| SOX1 protein [Monopterus albus] 34 2.5
gi|33415914|gb|AAQ18494.1| transcription factor Sox1b [Takifugu ... 34 2.5
gi|39586799|emb|CAE65842.1| Hypothetical protein CBG10973 [Caeno... 34 2.5
gi|39579923|emb|CAE56241.1| Hypothetical protein CBG23879 [Caeno... 34 2.5
gi|17975569|ref|NP_524735.1| CG18024-PA [Drosophila melanogaster... 34 2.5
gi|21264355|ref|NP_003070.3| SWI/SNF-related matrix-associated a... 33 3.3
gi|10181166|ref|NP_065643.1| SWI/SNF related, matrix associated,... 33 3.3
gi|13937941|gb|AAH07082.1| SWI/SNF-related matrix-associated act... 33 3.3
gi|29838380|gb|AAO92434.1| sex determining factor [Cervus albiro... 33 3.3
gi|29838376|gb|AAO92432.1| sex determining factor [Axis porcinus] 33 3.3
gi|29838386|gb|AAO92437.1| sex determining factor [Elaphurus dav... 33 3.3
gi|25067624|gb|AAN65339.1| sex-determining region Y protein [Alc... 33 3.3
gi|12657595|dbj|BAB21566.1| sex-determining region Y [Cervus nip... 33 3.3
gi|29838382|gb|AAO92435.1| sex determining factor [Cervus elaphu... 33 3.3
gi|9988954|gb|AAG09618.1| sex-determining region Y [Muntiacus mu... 33 3.3
gi|37777684|gb|AAR02416.1| SRY [Bubalus bubalis] 33 3.3
gi|29838378|gb|AAO92433.1| sex determining factor [Cervus elaphu... 33 3.3
gi|39587038|emb|CAE62973.1| Hypothetical protein CBG07191 [Caeno... 33 3.3
gi|34881785|ref|XP_229189.2| similar to RIKEN cDNA 1700001F22 [R... 33 3.3
gi|34881604|ref|XP_229111.2| similar to RIKEN cDNA 1700001F22 [R... 33 3.3
gi|39593526|emb|CAE61818.1| Hypothetical protein CBG05788 [Caeno... 33 3.3
gi|39587833|emb|CAE67851.1| Hypothetical protein CBG13439 [Caeno... 33 3.3
gi|30585419|gb|AAP36982.1| Homo sapiens SWI/SNF related, matrix ... 33 3.3
gi|50760871|ref|XP_418170.1| PREDICTED: similar to SWI/SNF-relat... 33 3.3
gi|39587037|emb|CAE62972.1| Hypothetical protein CBG07189 [Caeno... 33 3.3
gi|34881789|ref|XP_229183.2| similar to RIKEN cDNA 1700001F22 [R... 33 3.3
gi|34881628|ref|XP_229139.2| similar to RIKEN cDNA 1700001F22 [R... 33 3.3
gi|34932819|ref|XP_233094.2| similar to RIKEN cDNA 1700001F22 [R... 33 3.3
gi|34881793|ref|XP_229179.2| similar to RIKEN cDNA 1700001F22 [R... 33 3.3
gi|34881655|ref|XP_228675.2| similar to RIKEN cDNA 1700001F22 [R... 33 3.3
gi|34881803|ref|XP_229168.2| similar to RIKEN cDNA 1700001F22 [R... 33 3.3
gi|37805209|gb|AAH60350.1| MGC68799 protein [Xenopus laevis] 33 3.3
gi|14422418|dbj|BAB60828.1| xSox17alpha2 [Xenopus laevis] 33 3.3
gi|26345166|dbj|BAC36233.1| unnamed protein product [Mus musculus] 33 3.3
gi|50800980|ref|XP_424154.1| PREDICTED: similar to HMG domain pr... 33 3.3
gi|19114151|ref|NP_593239.1| pre-mrna splicing factor [Schizosac... 33 3.3
gi|38089236|ref|XP_134161.2| similar to BAF57 [Mus musculus] 33 3.3
gi|18378623|gb|AAL68649.1| sex-determining region Y [Muntiacus c... 33 3.3
gi|1255643|dbj|BAA07520.1| Sry-related HMG box sequence [Oryzias... 33 3.3
gi|2997749|gb|AAC08591.1| sex determining region Y protein [Isoo... 33 3.3
gi|729119|sp|P40669|CH07_CHICK SRY-related protein CH7 >gnl|BL_O... 33 3.3
gi|586015|sp|P37839|SOX1_PLEWA SOX-1 protein 33 3.3
gi|1255647|dbj|BAA07522.1| Sry-related HMG box sequence [Oryzias... 33 3.3
gi|18378621|gb|AAL68648.1| sex-determining region Y [Elaphodus c... 33 3.3
gi|1255645|dbj|BAA07521.1| Sry-related HMG box sequence [Oryzias... 33 3.3
gi|18378625|gb|AAL68650.1| sex-determining region Y [Muntiacus r... 33 3.3
gi|49257937|gb|AAH74534.1| Unknown (protein for MGC:69429) [Xeno... 33 3.3
gi|422301|pir||S32565 actin-binding protein - slime mold (Physar... 33 3.3
gi|31201651|ref|XP_309773.1| ENSANGP00000012626 [Anopheles gambi... 33 3.3
gi|50552520|ref|XP_503670.1| hypothetical protein [Yarrowia lipo... 33 3.3
gi|38074748|ref|XP_127390.2| similar to BAF57 [Mus musculus] 33 3.3
gi|15239023|ref|NP_199671.1| structural maintenance of chromosom... 33 3.3
gi|47226818|emb|CAG06660.1| unnamed protein product [Tetraodon n... 33 3.3
gi|123378|sp|P27347|MNBB_MAIZE DNA-binding protein MNB1B (HMG1-l... 33 4.3
gi|23272859|gb|AAH35655.1| FLJ35725 protein [Homo sapiens] 33 4.3
gi|7446229|pir||T03640 high mobility group protein MNB1b - maize... 33 4.3
gi|3687326|emb|CAA07254.1| calreticulin [Necator americanus] 33 4.3
gi|49069432|ref|XP_399005.1| hypothetical protein UM01390.1 [Ust... 33 4.3
gi|2495258|sp|P55863|SOX3_XENLA Transcription factor SOX-3 (SOX-... 33 4.3
gi|1806648|gb|AAB41544.1| structure-specific recognition protein... 33 4.3
gi|48140414|ref|XP_397106.1| similar to SoxB2 protein [Apis mell... 33 4.3
gi|21357781|ref|NP_648695.1| CG32139-PA [Drosophila melanogaster... 33 4.3
gi|34881632|ref|XP_229141.2| similar to RIKEN cDNA 1700001F22 [R... 33 4.3
gi|34881622|ref|XP_228684.2| similar to RIKEN cDNA 1700001F22 [R... 33 4.3
gi|50290305|ref|XP_447584.1| unnamed protein product [Candida gl... 33 4.3
gi|33622331|ref|NP_891872.1| pe-38 [Cryptophlebia leucotreta gra... 33 4.3
gi|19115757|ref|NP_594845.1| hypothetical Myb family DNA-binding... 33 4.3
gi|729351|sp|P40664|DM64_DROME SRY-related protein DM64 >gnl|BL_... 33 4.3
gi|34784528|gb|AAH56743.1| Sox2 protein [Danio rerio] >gnl|BL_OR... 33 4.3
gi|729123|sp|P40671|CH32_CHICK SRY-related protein CH32 >gnl|BL_... 33 4.3
gi|32330834|gb|AAP79912.1| HMG box protein Sox 2 [Dicentrarchus ... 33 4.3
gi|729350|sp|P40663|DM63_DROME SRY-related protein DM63 >gnl|BL_... 33 4.3
gi|34858031|ref|XP_227472.2| similar to Cgn-pending protein [Rat... 33 4.3
gi|3123302|sp|Q10369|YDBJ_SCHPO Hypothetical protein C22E12.19 i... 33 4.3
gi|50747274|ref|XP_420816.1| PREDICTED: similar to RIKEN cDNA 23... 33 4.3
gi|31201649|ref|XP_309772.1| ENSANGP00000012436 [Anopheles gambi... 33 4.3
gi|18859407|ref|NP_571926.1| SRY-box containing gene 32 [Danio r... 33 4.3
gi|14549154|gb|AAK14780.1| casanova [Danio rerio] 33 4.3
gi|15721898|dbj|BAB68398.1| sox transcription factor 226D7 [Dani... 33 4.3
gi|49523198|gb|AAH75166.1| Unknown (protein for MGC:82070) [Xeno... 33 5.6
gi|50257366|gb|EAL20075.1| hypothetical protein CNBF4010 [Crypto... 33 5.6
gi|31234639|ref|XP_319093.1| ENSANGP00000022331 [Anopheles gambi... 33 5.6
gi|11497245|ref|NP_051372.1| ErpL [Borrelia burgdorferi B31] >gn... 33 5.6
gi|1351093|sp|P48433|SOX3_CHICK Transcription factor SOX-3 >gnl|... 33 5.6
gi|45360537|ref|NP_988941.1| hypothetical protein MGC75938 [Xeno... 33 5.6
gi|5851951|emb|CAB55437.1| MST33A protein [Drosophila melanogaster] 33 5.6
gi|47213489|emb|CAF91146.1| unnamed protein product [Tetraodon n... 33 5.6
gi|48097474|ref|XP_393792.1| similar to CG32139-PA [Apis mellifera] 33 5.6
gi|17316365|ref|NP_477465.1| CG6541-PA [Drosophila melanogaster]... 33 5.6
gi|47565872|ref|ZP_00236911.1| hypothetical protein exported pro... 33 5.6
gi|38566778|emb|CAE76089.1| related to DNA damage checkpoint pro... 33 5.6
gi|6755612|ref|NP_035576.1| SRY-box 7 [Mus musculus] >gnl|BL_ORD... 33 5.6
gi|13899269|ref|NP_113627.1| SRY-box 7; SOX7 transcription facto... 33 5.6
gi|34881797|ref|XP_229176.2| similar to RIKEN cDNA 1700001F22 [R... 33 5.6
gi|27700957|ref|XP_224283.1| similar to mSox7 [Rattus norvegicus] 33 5.6
gi|21429704|gb|AAM50530.1| AT02631p [Drosophila melanogaster] 33 5.6
gi|33415934|gb|AAQ18504.1| transcription factor Sox7 [Takifugu r... 33 5.6
gi|7446212|pir||T07377 high mobility group protein - potato >gnl... 33 5.6
gi|17975536|ref|NP_524066.1| CG5893-PA [Drosophila melanogaster]... 33 5.6
gi|422657|pir||S33894 sox protein - lesser black-backed gull (fr... 33 5.6
gi|479918|pir||S35645 homeotic protein SOX-1 - Iberian ribbed ne... 33 5.6
gi|7512200|pir||S33898 sex-determining protein sox-S1 (clone Lf-... 33 5.6
gi|729347|sp|P40660|DM23_DROME SRY-related protein DM23 >gnl|BL_... 33 5.6
gi|22947806|gb|AAN07890.1| sex determining region Y [Clethrionom... 33 5.6
gi|312573|emb|CAA80646.1| sox [Larus fuscus] 33 5.6
gi|3982589|gb|AAC94973.1| SOX-28 protein [Homo sapiens] 33 5.6
gi|729117|sp|P40667|CH03_CHICK SRY-related protein CH3 >gnl|BL_O... 33 5.6
gi|38374217|gb|AAR19300.1| transcription factor Sox3 [Dinodon ru... 33 5.6
gi|729116|sp|P40666|CH02_CHICK SRY-related protein CH2 >gnl|BL_O... 33 5.6
gi|23956336|ref|NP_705784.1| postmeiotic segregation increased 1... 33 5.6
gi|27371255|gb|AAH41216.1| MGC52696 protein [Xenopus laevis] 33 5.6
gi|39645609|gb|AAH63718.1| MGC68625 protein [Xenopus laevis] 33 5.6
gi|47682826|gb|AAH70618.1| MGC81378 protein [Xenopus laevis] 33 5.6
gi|32421655|ref|XP_331271.1| hypothetical protein [Neurospora cr... 33 5.6
gi|45383726|ref|NP_989526.1| SRY (sex determining region Y)-box ... 33 5.6
gi|19698568|gb|AAL93211.1| Baf57 [Xenopus laevis] 33 5.6
gi|30584881|gb|AAP36695.1| Homo sapiens SRY (sex determining reg... 33 5.6
gi|34881649|ref|XP_228678.2| similar to RIKEN cDNA 1700001F22 [R... 33 5.6
gi|31241269|ref|XP_321065.1| ENSANGP00000007859 [Anopheles gambi... 33 5.6
gi|37682127|gb|AAQ97990.1| SRY-box 7 [Danio rerio] >gnl|BL_ORD_I... 32 7.3
gi|50758613|ref|XP_417340.1| PREDICTED: similar to chromosome 20... 32 7.3
gi|23482444|gb|EAA18427.1| related to CG16984 PROTEIN [Plasmodiu... 32 7.3
gi|7486349|pir||T01926 hypothetical protein F2P3.3 - Arabidopsis... 32 7.3
gi|46125477|ref|XP_387292.1| hypothetical protein FG07116.1 [Gib... 32 7.3
gi|42568646|ref|NP_200713.2| expressed protein [Arabidopsis thal... 32 7.3
gi|47215698|emb|CAG04782.1| unnamed protein product [Tetraodon n... 32 7.3
gi|30179900|ref|NP_005977.2| SRY (sex determining region Y)-box ... 32 7.3
gi|6678069|ref|NP_033259.1| SRY (sex determining region Y)-box 1... 32 7.3
gi|34871641|ref|XP_343922.1| similar to SOX15 [Rattus norvegicus] 32 7.3
gi|30024606|dbj|BAC75667.1| transcriptional factor SOX1 [Mus mus... 32 7.3
gi|45383488|ref|NP_989664.1| SRY (sex determining region Y)-box ... 32 7.3
gi|50540036|ref|NP_001002483.1| zgc:92865 [Danio rerio] >gnl|BL_... 32 7.3
gi|9858863|gb|AAG01174.1| smarce1-related protein [Homo sapiens] 32 7.3
gi|47216269|emb|CAG05965.1| unnamed protein product [Tetraodon n... 32 7.3
gi|7673027|gb|AAF66707.1| HMG domain protein HMGX2 [Homo sapiens... 32 7.3
gi|26353080|dbj|BAC40170.1| unnamed protein product [Mus musculus] 32 7.3
gi|2811002|sp|O00570|SOX1_HUMAN SOX-1 protein >gnl|BL_ORD_ID|128... 32 7.3
gi|24649035|ref|NP_651056.1| CG7046-PA [Drosophila melanogaster]... 32 7.3
gi|47223974|emb|CAG06151.1| unnamed protein product [Tetraodon n... 32 7.3
gi|46136071|ref|XP_389727.1| hypothetical protein FG09551.1 [Gib... 32 7.3
gi|32330830|gb|AAP79910.1| HMG box protein Sox 1-1 [Dicentrarchu... 32 7.3
gi|110046|pir||S10950 sex-determining protein - mouse (fragment)... 32 7.3
gi|3183176|sp|Q62247|SX16_MOUSE SOX-16 protein >gnl|BL_ORD_ID|72... 32 7.3
gi|1168423|sp|P40642|AMA2_ALLMI SRY-related protein AMA2 >gnl|BL... 32 7.3
gi|4100526|gb|AAD00888.1| Sox1 [Ictalurus punctatus] 32 7.3
gi|14192682|gb|AAK54465.1| cold-induced glucosyl transferase [So... 32 7.3
gi|3915056|sp|Q91731|SX11_XENLA Transcription factor SOX-11 (XSO... 32 7.3
gi|728843|sp|P40643|AMA3_ALLMI SRY-related protein AMA3 >gnl|BL_... 32 7.3
gi|42542933|gb|AAH66435.1| Smarce1 protein [Danio rerio] 32 7.3
gi|41152030|ref|NP_958455.1| SWI/SNF related, matrix associated,... 32 7.3
gi|10177633|dbj|BAB10781.1| unnamed protein product [Arabidopsis... 32 7.3
gi|17944766|gb|AAL48450.1| AT28425p [Drosophila melanogaster] 32 7.3
gi|38018014|gb|AAR08136.1| high mobility group box protein HMGB2... 32 7.3
gi|50603766|gb|AAH78062.1| Unknown (protein for MGC:82871) [Xeno... 32 7.3
gi|26987956|ref|NP_743381.1| biopolymer transport protein TolA [... 32 7.3
gi|28829071|gb|AAO51637.1| similar to Dictyostelium discoideum (... 32 7.3
gi|17017396|gb|AAL33652.1| HMG type nucleosome/chromatin assembl... 32 7.3
gi|39584610|emb|CAE72363.1| Hypothetical protein CBG19513 [Caeno... 32 9.5
gi|47206548|emb|CAF91617.1| unnamed protein product [Tetraodon n... 32 9.5
gi|33415916|gb|AAQ18495.1| transcription factor Sox2 [Takifugu r... 32 9.5
gi|31543759|ref|NP_035573.2| sex-determining region Y-box 2 [Mus... 32 9.5
gi|1209430|emb|CAA63847.1| SOX2 protein [Mus musculus] >gnl|BL_O... 32 9.5
gi|25091342|sp|Q9W7R5|SX21_CHICK Transcription factor SOX-21 >gn... 32 9.5
gi|11497151|ref|NP_051288.1| ErpY; outer surface protein F [Borr... 32 9.5
gi|3064136|gb|AAC14215.1| Sry-related HMG factor [Xenopus laevis] 32 9.5
gi|15823192|dbj|BAB68747.1| HMG-box transcription factor [Mus sp... 32 9.5
gi|47497984|ref|NP_998869.1| hypothetical protein MGC69326 [Xeno... 32 9.5
gi|15823174|dbj|BAB68738.1| HMG-box transcription factor [Mus mu... 32 9.5
gi|49899011|gb|AAH76717.1| Unknown (protein for MGC:79935) [Xeno... 32 9.5
gi|15823176|dbj|BAB68739.1| HMG-box transcription factor [Mus mu... 32 9.5
gi|6175039|sp|O42569|SOX2_XENLA Transcription factor SOX-2 (XLSO... 32 9.5
gi|15823178|dbj|BAB68740.1| HMG-box transcription factor [Mus mu... 32 9.5
gi|849044|dbj|BAA09168.1| SOX-2 [Gallus gallus] 32 9.5
gi|47226895|emb|CAG05787.1| unnamed protein product [Tetraodon n... 32 9.5
gi|33415912|gb|AAQ18493.1| transcription factor Sox1a [Takifugu ... 32 9.5
gi|730841|sp|Q08943|SSRP_MOUSE Structure-specific recognition pr... 32 9.5
gi|45551469|ref|NP_727959.2| CG12223-PD [Drosophila melanogaster... 32 9.5
gi|24642472|ref|NP_727960.1| CG12223-PA [Drosophila melanogaster... 32 9.5
gi|27734194|ref|NP_775560.1| SRY-box containing gene 30 [Mus mus... 32 9.5
gi|50286583|ref|XP_445720.1| unnamed protein product [Candida gl... 32 9.5
gi|37572253|gb|AAH33492.2| SRY (sex determining region Y)-box 30... 32 9.5
gi|18148993|dbj|BAB83531.1| SOX30 protein [Macaca fascicularis] 32 9.5
gi|30581117|ref|NP_848511.1| SRY (sex determining region Y)-box ... 32 9.5
gi|184240|gb|AAA35997.1| putative 32 9.5
gi|22094091|ref|NP_033261.1| SRY-box 15 [Mus musculus] >gnl|BL_O... 32 9.5
gi|28195386|ref|NP_003097.1| sex-determining region Y-box 2; tra... 32 9.5
gi|3165381|dbj|BAA28604.1| This gene is presumed to be mouse hom... 32 9.5
gi|1079089|pir||S50068 nonhistone chromosomal protein HMG1-like ... 32 9.5
gi|45555716|ref|NP_996485.1| CG12223-PE [Drosophila melanogaster... 32 9.5
gi|46437223|gb|EAK96573.1| hypothetical protein CaO19.10399 [Can... 32 9.5
gi|5902112|ref|NP_008948.1| SRY (sex determining region Y)-box 3... 32 9.5
gi|46437163|gb|EAK96514.1| hypothetical protein CaO19.2881 [Cand... 32 9.5
gi|2136184|pir||I38238 transcription factor SOX2 - human (fragme... 32 9.5
gi|45383968|ref|NP_990519.1| Sox2 transcription factor [Gallus g... 32 9.5
gi|587104|emb|CAA57212.1| unnamed protein product [Drosophila me... 32 9.5
gi|422656|pir||S33893 sox protein - lesser black-backed gull (fr... 32 9.5
gi|34979294|gb|AAQ83765.1| Sox14 [Alligator sinensis] 32 9.5
gi|110952|pir||S10949 sex-determining protein - mouse (fragment)... 32 9.5
gi|729122|sp|P40670|CH31_CHICK SRY-related protein CH31 >gnl|BL_... 32 9.5
gi|42543139|pdb|1O4X|B Chain B, Ternary Complex Of The Dna Bindi... 32 9.5
gi|1575721|gb|AAC52861.1| Sox15 [Mus musculus] 32 9.5
gi|544551|gb|AAB28973.1| SOX2=SRY DNA-binding domain [human, hea... 32 9.5
gi|7981366|emb|CAB91988.1| SRY HMG-box [Miniopterus schreibersii] 32 9.5
gi|48097855|ref|XP_391958.1| similar to CG18024-PA [Apis mellifera] 32 9.5
gi|28373291|pdb|1GT0|D Chain D, Crystal Structure Of A PouHMGDNA... 32 9.5
gi|7512043|pir||T13829 Tpr homolog - fruit fly (Drosophila melan... 32 9.5
gi|24652825|ref|NP_477067.2| CG8274-PA [Drosophila melanogaster]... 32 9.5
gi|32307765|gb|AAP79279.1| sox1/2/3 [Saccoglossus kowalevskii] 32 9.5
gi|33695134|ref|NP_892035.1| structure specific recognition prot... 32 9.5
gi|1711465|sp|P54231|SOX2_SHEEP Transcription factor SOX-2 >gnl|... 32 9.5
gi|34871238|ref|XP_220328.2| similar to Sox-30 [Rattus norvegicus] 32 9.5
gi|34856502|ref|XP_342458.1| Structure specific recognition prot... 32 9.5
gi|23619169|ref|NP_705131.1| hypothetical protein [Plasmodium fa... 32 9.5
gi|32410019|ref|XP_325490.1| predicted protein [Neurospora crass... 32 9.5
gi|49204505|dbj|BAD24665.1| SOX1 [Cynops pyrrhogaster] 32 9.5
>gi|17541094|ref|NP_501245.1| high Mobility Group protein (23.4 kD)
(hmg-5) [Caenorhabditis elegans]
gi|7503470|pir||T25760 hypothetical protein F45E4.9 -
Caenorhabditis elegans
gi|13559607|gb|AAK29819.1| Hmg protein 5 [Caenorhabditis elegans]
Length = 204
Score = 354 bits (909), Expect = 6e-97
Identities = 183/204 (89%), Positives = 183/204 (89%)
Frame = -1
Query: 615 MLGTISMRFFATKVVAPRASVAASTPQVPLGMNINPYAMFIKENFKANTSDMKRTDLMKE 436
MLGTISMRFFATKVVAPRASVAASTPQVPLGMNINPYAMFIKENFKANTSDMKRTDLMKE
Sbjct: 1 MLGTISMRFFATKVVAPRASVAASTPQVPLGMNINPYAMFIKENFKANTSDMKRTDLMKE 60
Query: 435 LSGKWKALSISEKDKYTELSKNYNAQKLDDFMKLSTEEQKKLVDSXXXXXXXXXXXXXXX 256
LSGKWKALSISEKDKYTELSKNYNAQKLDDFMKLSTEEQKKLVDS
Sbjct: 61 LSGKWKALSISEKDKYTELSKNYNAQKLDDFMKLSTEEQKKLVDSAKEKKAERASRRHAK 120
Query: 255 XXXXXXKQSGRPSVPPSAYALFIKEKLSGAGMESKEKMKEAVAQWKAFTDSQKKKYTDEA 76
KQSGRPSVPPSAYALFIKEKLSGAGMESKEKMKEAVAQWKAFTDSQKKKYTDEA
Sbjct: 121 ERREKRKQSGRPSVPPSAYALFIKEKLSGAGMESKEKMKEAVAQWKAFTDSQKKKYTDEA 180
Query: 75 KKLKDEYHVVLQKWEAEQKENADQ 4
KKLKDEYHVVLQKWEAEQKENADQ
Sbjct: 181 KKLKDEYHVVLQKWEAEQKENADQ 204