Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= F52G3_1
         (2424 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17568025|ref|NP_510742.1| ubiquitin thiolesterase, family 2 (...  1522   0.0
gi|37535038|ref|NP_921821.1| putative helicase [Oryza sativa (ja...   120   2e-25
gi|42568948|ref|NP_178583.2| hypothetical protein [Arabidopsis t...   119   4e-25
gi|15228453|ref|NP_189796.1| AT hook motif-containing protein-re...   114   8e-24
gi|20197614|gb|AAM15154.1| unknown protein [Arabidopsis thaliana...   114   1e-23
gi|17534623|ref|NP_494149.1| predicted CDS, putative protein of ...   113   2e-23
gi|15231996|ref|NP_189741.1| hypothetical protein [Arabidopsis t...   112   3e-23
gi|15219133|ref|NP_175704.1| hypothetical protein [Arabidopsis t...   112   5e-23
gi|34910280|ref|NP_916487.1| helicase-like protein [Oryza sativa...   110   2e-22
gi|15231181|ref|NP_187933.1| hypothetical protein [Arabidopsis t...   107   1e-21
gi|17533663|ref|NP_494302.1| predicted CDS, putative protein of ...   107   1e-21
gi|10177991|dbj|BAB11364.1| helicase [Arabidopsis thaliana]           107   2e-21
gi|25353661|pir||H84464 probable helicase [imported] - Arabidops...   106   2e-21
gi|9294530|dbj|BAB02793.1| helicase-like protein [Arabidopsis th...   106   2e-21
gi|17537113|ref|NP_493834.1| putative endoplasmic reticulum prot...   104   1e-20
gi|17536913|ref|NP_494143.1| predicted CDS, putative protein of ...   102   6e-20
gi|17537853|ref|NP_494142.1| predicted CDS, putative endoplasmic...   102   6e-20
gi|34912980|ref|NP_917837.1| B1158C05.18 [Oryza sativa (japonica...   101   7e-20
gi|21741343|emb|CAD40616.1| OSJNBb0066J23.21 [Oryza sativa (japo...    99   5e-19
gi|15220267|ref|NP_174828.1| AT hook motif-containing protein-re...    98   1e-18
gi|37531978|ref|NP_920291.1| putative helicase [Oryza sativa (ja...    97   1e-18
gi|37531806|ref|NP_920205.1| putative DNA helicase homolog [Oryz...    97   1e-18
gi|22857576|gb|AAN09850.1| putative helicase, 3'-partial [Oryza ...    97   1e-18
gi|28201555|gb|AAO34493.1| putative helicase [Oryza sativa (japo...    95   7e-18
gi|37535030|ref|NP_921817.1| hypothetical protein [Oryza sativa ...    94   2e-17
gi|34906276|ref|NP_914485.1| P0489A01.23 [Oryza sativa (japonica...    93   3e-17
gi|15221815|ref|NP_175845.1| hypothetical protein [Arabidopsis t...    93   3e-17
gi|31229703|ref|XP_318271.1| ENSANGP00000001497 [Anopheles gambi...    93   3e-17
gi|34015367|gb|AAQ56555.1| hypothetical protein OSJNBa0070J19.12...    91   1e-16
gi|34394334|dbj|BAC84865.1| helicase-like protein [Oryza sativa ...    91   1e-16
gi|38424032|dbj|BAD01692.1| helicase-like protein [Oryza sativa ...    89   5e-16
gi|15230800|ref|NP_189677.1| hypothetical protein [Arabidopsis t...    86   4e-15
gi|12324712|gb|AAG52315.1| hypothetical protein, 5' partial; 938...    84   2e-14
gi|9279565|dbj|BAB01023.1| helicase-like protein [Arabidopsis th...    84   2e-14
gi|38567769|emb|CAE76056.1| B1248C03.15 [Oryza sativa (japonica ...    83   3e-14
gi|17551706|ref|NP_508746.1| predicted CDS, putative protein fam...    82   8e-14
gi|34903106|ref|NP_912900.1| unnamed protein product [Oryza sati...    81   1e-13
gi|25404482|pir||C96668 unknown protein F15H21.18 [imported] - A...    79   4e-13
gi|34904560|ref|NP_913627.1| putative helicase [Oryza sativa (ja...    79   5e-13
gi|25353659|pir||A96586 hypothetical protein F20D21.24 [imported...    78   9e-13
gi|25353665|pir||H84515 probable helicase [imported] - Arabidops...    75   7e-12
gi|49095908|ref|XP_409415.1| hypothetical protein AN5278.2 [Aspe...    74   1e-11
gi|37533896|ref|NP_921250.1| Helicase-like protein [Oryza sativa...    74   1e-11
gi|15240111|ref|NP_198527.1| hypothetical protein [Arabidopsis t...    73   4e-11
gi|25353663|pir||H84486 probable helicase [imported] - Arabidops...    73   4e-11
gi|38346787|emb|CAE02205.2| OSJNBa0095H06.12 [Oryza sativa (japo...    70   2e-10
gi|27817864|dbj|BAC55632.1| helicase-like protein [Oryza sativa ...    70   3e-10
gi|50838977|gb|AAT81738.1| hypothetical protein [Oryza sativa (j...    69   4e-10
gi|38346357|emb|CAE04194.2| OSJNBa0011E07.3 [Oryza sativa (japon...    67   3e-09
gi|14140286|gb|AAK54292.1| putative helicase [Oryza sativa (japo...    65   6e-09
gi|15230775|ref|NP_189662.1| hypothetical protein [Arabidopsis t...    64   1e-08
gi|37530420|ref|NP_919512.1| putative helicase [Oryza sativa (ja...    64   2e-08
gi|34902784|ref|NP_912739.1| unnamed protein product [Oryza sati...    64   2e-08
gi|17533195|ref|NP_494509.1| putative mitochondrial protein fami...    63   3e-08
gi|17536989|ref|NP_494464.1| 7TM chemoreceptor, subfamily 2 (2D4...    63   4e-08
gi|34914948|ref|NP_918821.1| helicase-like protein [Oryza sativa...    62   6e-08
gi|34911738|ref|NP_917216.1| P0707D10.33 [Oryza sativa (japonica...    62   8e-08
gi|37532120|ref|NP_920362.1| hypothetical protein [Oryza sativa ...    61   1e-07
gi|15229268|ref|NP_189921.1| helicase-related [Arabidopsis thali...    60   2e-07
gi|37533690|ref|NP_921147.1| hypothetical protein [Oryza sativa ...    60   2e-07
gi|24960752|gb|AAN65446.1| Putative helicase [Oryza sativa (japo...    57   2e-06
gi|38346906|emb|CAE03875.2| OSJNBb0015N08.3 [Oryza sativa (japon...    57   2e-06
gi|50878398|gb|AAT85173.1| hypothetical protein [Oryza sativa (j...    56   4e-06
gi|38567777|emb|CAE76063.1| B1340F09.1 [Oryza sativa (japonica c...    55   1e-05
gi|9294330|dbj|BAB02227.1| unnamed protein product [Arabidopsis ...    55   1e-05
gi|42562935|ref|NP_176623.2| hypothetical protein [Arabidopsis t...    52   5e-05
gi|10176813|dbj|BAB10021.1| unnamed protein product [Arabidopsis...    51   1e-04
gi|15235833|ref|NP_192522.1| hypothetical protein [Arabidopsis t...    50   2e-04
gi|31207429|ref|XP_312681.1| ENSANGP00000000228 [Anopheles gambi...    50   3e-04
gi|50878458|gb|AAT85232.1| hypothetical protein [Oryza sativa (j...    47   0.002
gi|11358014|pir||T47300 hypothetical protein T14K23.130 - Arabid...    47   0.003
gi|37533506|ref|NP_921055.1| hypothetical protein [Oryza sativa ...    45   0.011
gi|31197075|ref|XP_307485.1| ENSANGP00000002164 [Anopheles gambi...    44   0.018
gi|34905464|ref|NP_914079.1| P0487H02.26 [Oryza sativa (japonica...    44   0.024
gi|23481150|gb|EAA17514.1| hypothetical protein [Plasmodium yoel...    42   0.052
gi|15228514|ref|NP_189818.1| hypothetical protein [Arabidopsis t...    42   0.090
gi|39581887|emb|CAE72849.1| Hypothetical protein CBG20144 [Caeno...    41   0.12
gi|39581995|emb|CAE64426.1| Hypothetical protein CBG09120 [Caeno...    41   0.12
gi|39593524|emb|CAE61816.1| Hypothetical protein CBG05784 [Caeno...    41   0.15
gi|22138470|gb|AAM93454.1| hypothetical protein, 5'-partial [Ory...    41   0.15
gi|15219165|ref|NP_175710.1| ubiquitin-conjugating enzyme family...    39   0.44
gi|31212315|ref|XP_315142.1| ENSANGP00000000840 [Anopheles gambi...    39   0.58
gi|16805045|ref|NP_473074.1| DNA helicase, putative [Plasmodium ...    38   1.3
gi|21743013|emb|CAD40308.1| OSJNBb0013O03.3 [Oryza sativa (japon...    38   1.3
gi|46105222|ref|XP_380415.1| hypothetical protein FG00239.1 [Gib...    37   2.9
gi|17559870|ref|NP_507884.1| predicted CDS, putative protein fam...    36   3.8
gi|50427765|ref|XP_462495.1| unnamed protein product [Debaryomyc...    36   4.9
gi|40074465|gb|AAR39440.1| kinesin family member 11 [Dictyosteli...    36   4.9
gi|50549521|ref|XP_502231.1| hypothetical protein [Yarrowia lipo...    35   6.4
gi|31200647|ref|XP_309271.1| ENSANGP00000011991 [Anopheles gambi...    35   6.4
gi|50758374|ref|XP_415892.1| PREDICTED: similar to ubiquitin spe...    35   6.4
gi|15605867|ref|NP_213244.1| ATP-dependent helicase (DinG family...    35   6.4
gi|24667051|ref|NP_649153.1| CG8334-PA [Drosophila melanogaster]...    35   6.4
gi|30230651|gb|AAP20874.1| sombrero SmbA [Dictyostelium discoideum]    35   8.4
gi|14133665|gb|AAK54095.1| histidine kinase DhkK [Dictyostelium ...    35   8.4
gi|23488745|gb|EAA21389.1| hypothetical protein [Plasmodium yoel...    35   8.4
gi|23510022|ref|NP_702688.1| ubiquitin-specific protease, putati...    35   8.4


>gi|17568025|ref|NP_510742.1| ubiquitin thiolesterase, family 2
            (XR558) [Caenorhabditis elegans]
 gi|7503973|pir||T32463 hypothetical protein F52G3.3 - Caenorhabditis
            elegans
 gi|9802963|gb|AAF99971.1| Hypothetical protein F52G3.3
            [Caenorhabditis elegans]
          Length = 807

 Score = 1522 bits (3940), Expect = 0.0
 Identities = 756/807 (93%), Positives = 756/807 (93%)
 Frame = -1

Query: 2424 MDKAGGPVEQGKRRVMLNEAHYHLDFQVMGPFEACWNMSRFLMHGSSHIGQVLYVDAENK 2245
            MDKAGGPVEQGKRRVMLNEAHYHLDFQVMGPFEACWNMSRFLMHGSSHIGQVLYVDAENK
Sbjct: 1    MDKAGGPVEQGKRRVMLNEAHYHLDFQVMGPFEACWNMSRFLMHGSSHIGQVLYVDAENK 60

Query: 2244 STVFLDEDGIDAEKAEHILSEEEDSQVIAWFRINKKPIDLGDGRRTTDLTFLEVPKYYRF 2065
            STVFLDEDGIDAEKAEHILSEEEDSQVIAWFRINKKPIDLGDGRRTTDLTFLEVPKYYRF
Sbjct: 61   STVFLDEDGIDAEKAEHILSEEEDSQVIAWFRINKKPIDLGDGRRTTDLTFLEVPKYYRF 120

Query: 2064 DTASKSFIFRQQDLSHMILPRIHTPPARNLQAIATRLLAMNMCGPTSFDELKTYKGKVYK 1885
            DTASKSFIFRQQDLSHMILPRIHTPPARNLQAIATRLLAMNMCGPTSFDELKTYKGKVYK
Sbjct: 121  DTASKSFIFRQQDLSHMILPRIHTPPARNLQAIATRLLAMNMCGPTSFDELKTYKGKVYK 180

Query: 1884 TCLEAAEARGLMNGIDEWVNVINEIFELDGPTASRRAFAQILLYTCPGKPKLLFDLCYEK 1705
            TCLEAAEARGLMNGIDEWVNVINEIFELDGPTASRRAFAQILLYTCPGKPKLLFDLCYEK
Sbjct: 181  TCLEAAEARGLMNGIDEWVNVINEIFELDGPTASRRAFAQILLYTCPGKPKLLFDLCYEK 240

Query: 1704 LVNQKSTKRSDDEKRAHALRHINFILNNGGMSLADFELDELDVSGNVPDGLTAEEEEDNP 1525
            LVNQKSTKRSDDEKRAHALRHINFILNNGGMSLADFELDELDVSGNVPDGLTAEEEEDNP
Sbjct: 241  LVNQKSTKRSDDEKRAHALRHINFILNNGGMSLADFELDELDVSGNVPDGLTAEEEEDNP 300

Query: 1524 NIDLITKTDYELRSNSQYKKLNANQKKFVDRALELGPIGRNTTRLLFVDGPGGTGKTFCY 1345
            NIDLITKTDYELRSNSQYKKLNANQKKFVDRALELGPIGRNTTRLLFVDGPGGTGKTFCY
Sbjct: 301  NIDLITKTDYELRSNSQYKKLNANQKKFVDRALELGPIGRNTTRLLFVDGPGGTGKTFCY 360

Query: 1344 TTIYFAFKAKSIVTICVSHHHLSLNLXXXXXXXXXXXXXXFHPLLFVFQHSXXXXXXXXX 1165
            TTIYFAFKAKSIVTICVSHHHLSLNL              FHPLLFVFQHS
Sbjct: 361  TTIYFAFKAKSIVTICVSHHHLSLNLKFFFFYKIFFPNSKFHPLLFVFQHSILHFKFILK 420

Query: 1164 XXXXFRSISRNCGVQFFQKMHQSDLPFGGVLMIMGGDWRQILPIVPEAHSQGAVNYTLKK 985
                FRSISRNCGVQFFQKMHQSDLPFGGVLMIMGGDWRQILPIVPEAHSQGAVNYTLKK
Sbjct: 421  IIFVFRSISRNCGVQFFQKMHQSDLPFGGVLMIMGGDWRQILPIVPEAHSQGAVNYTLKK 480

Query: 984  DTYLVLPCLEYREPLISVCGTQDDLTTQIPMPEEDEFDGMCXXXXXXXXXXXXXXXXXXX 805
            DTYLVLPCLEYREPLISVCGTQDDLTTQIPMPEEDEFDGMC
Sbjct: 481  DTYLVLPCLEYREPLISVCGTQDDLTTQIPMPEEDEFDGMCSRPRSPPAPVQVPVQASVQ 540

Query: 804  XXXXXVEEIQFDEPIEEQTLMPFLFLDNSFGQQNCFMNALLNMLFVSATIREKFVEFHQQ 625
                 VEEIQFDEPIEEQTLMPFLFLDNSFGQQNCFMNALLNMLFVSATIREKFVEFHQQ
Sbjct: 541  VPAEPVEEIQFDEPIEEQTLMPFLFLDNSFGQQNCFMNALLNMLFVSATIREKFVEFHQQ 600

Query: 624  RKEKLSAEVGRIFRGNVKSVKRLRHLLPNRGYHAGQQNVSEAFNVLREKYLGLVMHQSGT 445
            RKEKLSAEVGRIFRGNVKSVKRLRHLLPNRGYHAGQQNVSEAFNVLREKYLGLVMHQSGT
Sbjct: 601  RKEKLSAEVGRIFRGNVKSVKRLRHLLPNRGYHAGQQNVSEAFNVLREKYLGLVMHQSGT 660

Query: 444  LQETVDFTHGLGTTLTKYTICGKGNLVKSMSMESAHYLFVPVFHDNKSEFKDFNSNEAVE 265
            LQETVDFTHGLGTTLTKYTICGKGNLVKSMSMESAHYLFVPVFHDNKSEFKDFNSNEAVE
Sbjct: 661  LQETVDFTHGLGTTLTKYTICGKGNLVKSMSMESAHYLFVPVFHDNKSEFKDFNSNEAVE 720

Query: 264  LLSSKYYLKAFTEFTGTDGNGHYVSWIKQSDNSWKCINVNGTDCGSRENGRNHPHGHIRS 85
            LLSSKYYLKAFTEFTGTDGNGHYVSWIKQSDNSWKCINVNGTDCGSRENGRNHPHGHIRS
Sbjct: 721  LLSSKYYLKAFTEFTGTDGNGHYVSWIKQSDNSWKCINVNGTDCGSRENGRNHPHGHIRS 780

Query: 84   NRCPSRSTKRAKSQRSTKDQSIRKEHR 4
            NRCPSRSTKRAKSQRSTKDQSIRKEHR
Sbjct: 781  NRCPSRSTKRAKSQRSTKDQSIRKEHR 807




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