BLASTX 2.2.4 [Aug-26-2002]
Query= F53A3_1
         (882 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|25395668|pir||D88395 protein F53A3.6 [imported] - Caenorhabdi...   221   2e-56
gi|25151461|ref|NP_497477.2| prion-like Q/N-rich domain protein ...   221   2e-56
gi|32033668|ref|ZP_00133979.1| COG0210: Superfamily I DNA and RN...    34   4.9


>gi|25395668|pir||D88395 protein F53A3.6 [imported] - Caenorhabditis
            elegans
          Length = 451

 Score =  221 bits (562), Expect = 2e-56
 Identities = 125/293 (42%), Positives = 125/293 (42%)
 Frame = +1

Query: 1    MKSPGSSAMENXXXXXXXXXXXXXXTIPTPTVNLPDVVXXXXXXXXXXXXXXXXXXXXSE 180
            MKSPGSSAMEN              TIPTPTVNLPDVV                    SE
Sbjct: 159  MKSPGSSAMENAAAAAQAAQAQAQATIPTPTVNLPDVVAIAAAAATAQPSAAAAKRPASE 218

Query: 181  TPPNGLPKVPRHDEQQQQQNNAHSIVMGAREGFLAMNPSLAGHVFPXXXXXXXXXXXXXX 360
            TPPNGLPKVPRHDEQQQQQNNAHSIVMGAREGFLAMNPSLAGHVFP
Sbjct: 219  TPPNGLPKVPRHDEQQQQQNNAHSIVMGAREGFLAMNPSLAGHVFPASSASTSGAPGAHS 278

Query: 361  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLYINTXXXXXXXXXXXX 540
                                                      SLYINT
Sbjct: 279  ATTSGGAGLIGISAATQAQLQAQQAAQAAAAAAAAAAAQATQSLYINTSVAPGAQAASAQ 338

Query: 541  XXXXXXXXXXXXXXXXXXXXXIRLLQGLPPFLTAGSGSAGIPYFSALSXXXXXXXXXXXX 720
                                 IRLLQGLPPFLTAGSGSAGIPYFSALS
Sbjct: 339  GGGGGQVVAAQQSNQAATAEAIRLLQGLPPFLTAGSGSAGIPYFSALSQQLNQLGAAAPG 398

Query: 721  XXXXXXXXQFXXXXXXXXXXXXXXXXXXXXXXXXXIKVVFLKAKIEVFWNFQQ 879
                    QF                         IKVVFLKAKIEVFWNFQQ
Sbjct: 399  APGTLNGLQFPANAALGPQLAGAALLAAVPGAQQQIKVVFLKAKIEVFWNFQQ 451


>gi|25151461|ref|NP_497477.2| prion-like Q/N-rich domain protein
           PQN-41, Prion-like Q/N-rich domain protein (pqn-41)
           [Caenorhabditis elegans]
 gi|21328352|gb|AAB70991.2| Hypothetical protein F53A3.6
           [Caenorhabditis elegans]
          Length = 293

 Score =  221 bits (562), Expect = 2e-56
 Identities = 125/293 (42%), Positives = 125/293 (42%)
 Frame = +1

Query: 1   MKSPGSSAMENXXXXXXXXXXXXXXTIPTPTVNLPDVVXXXXXXXXXXXXXXXXXXXXSE 180
           MKSPGSSAMEN              TIPTPTVNLPDVV                    SE
Sbjct: 1   MKSPGSSAMENAAAAAQAAQAQAQATIPTPTVNLPDVVAIAAAAATAQPSAAAAKRPASE 60

Query: 181 TPPNGLPKVPRHDEQQQQQNNAHSIVMGAREGFLAMNPSLAGHVFPXXXXXXXXXXXXXX 360
           TPPNGLPKVPRHDEQQQQQNNAHSIVMGAREGFLAMNPSLAGHVFP
Sbjct: 61  TPPNGLPKVPRHDEQQQQQNNAHSIVMGAREGFLAMNPSLAGHVFPASSASTSGAPGAHS 120

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLYINTXXXXXXXXXXXX 540
                                                     SLYINT
Sbjct: 121 ATTSGGAGLIGISAATQAQLQAQQAAQAAAAAAAAAAAQATQSLYINTSVAPGAQAASAQ 180

Query: 541 XXXXXXXXXXXXXXXXXXXXXIRLLQGLPPFLTAGSGSAGIPYFSALSXXXXXXXXXXXX 720
                                IRLLQGLPPFLTAGSGSAGIPYFSALS
Sbjct: 181 GGGGGQVVAAQQSNQAATAEAIRLLQGLPPFLTAGSGSAGIPYFSALSQQLNQLGAAAPG 240

Query: 721 XXXXXXXXQFXXXXXXXXXXXXXXXXXXXXXXXXXIKVVFLKAKIEVFWNFQQ 879
                   QF                         IKVVFLKAKIEVFWNFQQ
Sbjct: 241 APGTLNGLQFPANAALGPQLAGAALLAAVPGAQQQIKVVFLKAKIEVFWNFQQ 293

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