Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= F53C11_4
         (1584 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17561274|ref|NP_506414.1| putative nuclear protein (59.1 kD) ...  1009   0.0
gi|39590499|emb|CAE66239.1| Hypothetical protein CBG11483 [Caeno...   783   0.0
gi|50254574|gb|EAL17323.1| hypothetical protein CNBN1500 [Crypto...    37   1.0
gi|48096023|ref|XP_392380.1| similar to CG1646-PA [Apis mellifera]     37   1.0
gi|3298516|dbj|BAA31538.1| stage III sporulation protein AH [Bac...    37   1.7
gi|32422149|ref|XP_331518.1| predicted protein [Neurospora crass...    36   3.0
gi|34540367|ref|NP_904846.1| hypothetical protein PG0556 [Porphy...    36   3.0
gi|50731087|ref|XP_417159.1| PREDICTED: similar to hypothetical ...    36   3.0
gi|46309515|ref|NP_996955.1| hypothetical protein zgc:77279 [Dan...    35   3.9
gi|11291644|pir||T51018 hypothetical protein B7J19.170 [imported...    35   3.9
gi|32409705|ref|XP_325333.1| hypothetical protein ( hypothetical...    35   3.9
gi|17933552|ref|NP_525064.1| CG6450-PC [Drosophila melanogaster]...    35   6.6
gi|19921116|ref|NP_609448.1| CG12299-PA [Drosophila melanogaster...    34   8.6


>gi|17561274|ref|NP_506414.1| putative nuclear protein (59.1 kD)
            (5O266) [Caenorhabditis elegans]
 gi|7504036|pir||T22559 hypothetical protein F53C11.4 - Caenorhabditis
            elegans
 gi|3877483|emb|CAB02121.1| Hypothetical protein F53C11.4
            [Caenorhabditis elegans]
          Length = 527

 Score = 1009 bits (2609), Expect = 0.0
 Identities = 504/527 (95%), Positives = 504/527 (95%)
 Frame = -1

Query: 1584 MSFNIENESVVCQLYHRTKHNNSVNVVCELSEKIGSPQLENGEWVVPNDVTGLNAKKSKV 1405
            MSFNIENESVVCQLYHRTKHNNSVNVVCELSEKIGSPQLENGEWVVPNDVTGLNAKKSKV
Sbjct: 1    MSFNIENESVVCQLYHRTKHNNSVNVVCELSEKIGSPQLENGEWVVPNDVTGLNAKKSKV 60

Query: 1404 VKIRFHPSVSKLSSEGSALHQAACESALKYXXXXXXXXDWTRKTNHDDDLFGKQIDKIIE 1225
            VKIRFHPSVSKLSSEGSALHQAACESALKY        DWTRKTNHDDDLFGKQIDKIIE
Sbjct: 61   VKIRFHPSVSKLSSEGSALHQAACESALKYLDLLLDDSDWTRKTNHDDDLFGKQIDKIIE 120

Query: 1224 YLSEMDKIIEIDTSKIGLTLLHDEFFDEFVKLISCKSISSHLHTIISDDDDAHQSAQIVF 1045
            YLSEMDKIIEIDTSKIGLTLLHDEFFDEFVKLISCKSISSHLHTIISDDDDAHQSAQIVF
Sbjct: 121  YLSEMDKIIEIDTSKIGLTLLHDEFFDEFVKLISCKSISSHLHTIISDDDDAHQSAQIVF 180

Query: 1044 EKDGRSRQIISIDVDAGYLKSSESGQECVFDVSKTCFTWVLPRHEDDFENSPPTVSHKLD 865
            EKDGRSRQIISIDVDAGYLKSSESGQECVFDVSKTCFTWVLPRHEDDFENSPPTVSHKLD
Sbjct: 181  EKDGRSRQIISIDVDAGYLKSSESGQECVFDVSKTCFTWVLPRHEDDFENSPPTVSHKLD 240

Query: 864  CYMWIDEEKQEMPVYSPCASVFHHLDKLTASLSACGSPTFNGVLQRVPQVLAVDAIIGLD 685
            CYMWIDEEKQEMPVYSPCASVFHHLDKLTASLSACGSPTFNGVLQRVPQVLAVDAIIGLD
Sbjct: 241  CYMWIDEEKQEMPVYSPCASVFHHLDKLTASLSACGSPTFNGVLQRVPQVLAVDAIIGLD 300

Query: 684  KSEAPHLHKFIQNITQAPLMVHTDFDNESLDCYSDSECKLTISPTDSIDSGVSLTSPTRQ 505
            KSEAPHLHKFIQNITQAPLMVHTDFDNESLDCYSDSECKLTISPTDSIDSGVSLTSPTRQ
Sbjct: 301  KSEAPHLHKFIQNITQAPLMVHTDFDNESLDCYSDSECKLTISPTDSIDSGVSLTSPTRQ 360

Query: 504  GSFDEDDGDDELTATSPGMRTRSRSESCSSLKGILKWPRRPNTMSRLAAKPYLIRSYSEC 325
            GSFDEDDGDDELTATSPGMRTRSRSESCSSLKGILKWPRRPNTMSRLAAKPYLIRSYSEC
Sbjct: 361  GSFDEDDGDDELTATSPGMRTRSRSESCSSLKGILKWPRRPNTMSRLAAKPYLIRSYSEC 420

Query: 324  HHDESSFPPLIPLRFSEDDEDAFHETDDSSSDCCVLPAAPRKKSVSFSERIEQTRLFNSN 145
            HHDESSFPPLIPLRFSEDDEDAFHETDDSSSDCCVLPAAPRKKSVSFSERIEQTRLFNSN
Sbjct: 421  HHDESSFPPLIPLRFSEDDEDAFHETDDSSSDCCVLPAAPRKKSVSFSERIEQTRLFNSN 480

Query: 144  TSINAQXXXXXXXXXXXXXXXNSLASSIESIHEETGRISPAARHQTV 4
            TSINAQ               NSLASSIESIHEETGRISPAARHQTV
Sbjct: 481  TSINAQKRKNLKKNEKKKKRENSLASSIESIHEETGRISPAARHQTV 527


>gi|39590499|emb|CAE66239.1| Hypothetical protein CBG11483
            [Caenorhabditis briggsae]
          Length = 533

 Score =  783 bits (2023), Expect = 0.0
 Identities = 390/534 (73%), Positives = 450/534 (84%), Gaps = 7/534 (1%)
 Frame = -1

Query: 1584 MSFNIENESVVCQLYHRTKHNNSVNVVCELSEKIGSPQLENGEWVVPNDVTGLNAKKSKV 1405
            MSFNI+NES VCQL+HR+KHNN+VNVVCELSEKIGSPQ ENGEW+VP+DV GLN KK KV
Sbjct: 1    MSFNIKNESKVCQLHHRSKHNNNVNVVCELSEKIGSPQFENGEWMVPSDVVGLNGKKPKV 60

Query: 1404 VKIRFHPSVSKLSSEGSALHQAACESALKYXXXXXXXXDWTRKTNHDDDLFGKQIDKIIE 1225
            VK+RFHPSVS +SS  +ALHQAAC+SALKY         WTRK++ +D LFGKQ+DKI+E
Sbjct: 61   VKLRFHPSVSHMSSGDAALHQAACQSALKYLDLLLEESVWTRKSDQEDQLFGKQLDKIVE 120

Query: 1224 YLSEMDKIIEIDTSKIGLTLLHDEFFDEFVKLISCKSISSHLHTIISDDDDAHQSAQIVF 1045
             L EMDK++EID SK+GLT LH+E FDEFVKLISCKSISSHLHT+IS +DDAHQSA+I+F
Sbjct: 121  LLVEMDKVLEIDVSKVGLTFLHNELFDEFVKLISCKSISSHLHTVIS-EDDAHQSAEIIF 179

Query: 1044 EKDGRSRQIISIDVDAGYLKSSESGQECVFDVSKTCFTWVLPRHEDDFENSPPTVSHKLD 865
            EKDGRSR++IS+D DAGYLKSSESG +CVF+V+K+CFTWVLPR ++D +NSPP VS KLD
Sbjct: 180  EKDGRSRKLISLDFDAGYLKSSESGLDCVFEVTKSCFTWVLPRVDEDEDNSPPNVSQKLD 239

Query: 864  CYMWIDEEKQEMPVYSPCASVFHHLDKLT---ASLSAC-GSPTFNGVLQRVPQVLAVDAI 697
            C++W+D  K +MPVYSPCA+VFH+LDKLT   ASLSAC  SP  NGVLQ+V   L  +AI
Sbjct: 240  CFIWVDGIKLDMPVYSPCATVFHYLDKLTSSLASLSACPTSPNANGVLQKVSNTLVSEAI 299

Query: 696  IGLDKSEAPHLHKFIQNITQAPLMVHTDFDNESLDCYSDSECKLTISPTDSIDSGVSLTS 517
            +GLDKSEAPHLHKFI NITQAPLM+ TDFD+ESLD YSDSE KLTISPTDS+DSGVSL+S
Sbjct: 300  VGLDKSEAPHLHKFILNITQAPLMITTDFDHESLDIYSDSETKLTISPTDSVDSGVSLSS 359

Query: 516  PTRQGSF--DEDDGDDELTATSPGMRTRSRSESCSSLKGILKWPRRPNTMSRLAAKPYLI 343
            PTRQ SF  D+DDGDDEL+ATSP MR+RSRSESCSSLKGILKWPRR   +SR   KP+L+
Sbjct: 360  PTRQCSFDDDDDDGDDELSATSPVMRSRSRSESCSSLKGILKWPRRAAPISRFGVKPHLM 419

Query: 342  RSYSECHHDESSFPPLIPLRFSEDDEDAFHETDDSSSDCCVLPAAPRKKSVSFSERIEQT 163
            RSYSECHHD++++ P++P RFSEDDEDAFHE DD SSDCCVLPAAPRKKSVSFSERIEQT
Sbjct: 420  RSYSECHHDDAAYHPVMPFRFSEDDEDAFHEEDDDSSDCCVLPAAPRKKSVSFSERIEQT 479

Query: 162  RLFNSNTSINAQXXXXXXXXXXXXXXXNSLASSIESIHEE-TGRISPAARHQTV 4
            RLFNSNTSI +Q               NSLASSIESIHEE  GR+SP  RHQTV
Sbjct: 480  RLFNSNTSIESQRRKNLKKTEKKKKRENSLASSIESIHEEVAGRVSPGTRHQTV 533




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