Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= F54C9_3
         (246 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17534331|ref|NP_495809.1| putative protein (9.3 kD) (2I856) [...   137   8e-32
gi|39587117|emb|CAE57584.1| Hypothetical protein CBG00563 [Caeno...   111   3e-24
gi|15646069|ref|NP_208251.1| DNA polymerase III alpha-subunit (d...    34   0.92
gi|15612418|ref|NP_224071.1| DNA POLYMERASE III, ALPHA CHAIN [He...    34   0.92
gi|46227109|gb|EAK88059.1| protein with conserved N-terminal loc...    31   7.8


>gi|17534331|ref|NP_495809.1| putative protein (9.3 kD) (2I856)
           [Caenorhabditis elegans]
 gi|7504152|pir||T22630 hypothetical protein F54C9.3 -
           Caenorhabditis elegans
 gi|3877499|emb|CAA90249.1| Hypothetical protein F54C9.3
           [Caenorhabditis elegans]
          Length = 81

 Score =  137 bits (344), Expect = 8e-32
 Identities = 69/81 (85%), Positives = 69/81 (85%)
 Frame = -1

Query: 246 MSTKKLDMTPDEVVEGEYVNVGXXXXXXXXXXXXRKDYETLQDFLKRDEYSAETKRDKFK 67
           MSTKKLDMTPDEVVEGEYVNVG            RKDYETLQDFLKRDEYSAETKRDKFK
Sbjct: 1   MSTKKLDMTPDEVVEGEYVNVGRSRSATATSTSSRKDYETLQDFLKRDEYSAETKRDKFK 60

Query: 66  TVQVQSLDNSYKGRKTDLSLQ 4
           TVQVQSLDNSYKGRKTDLSLQ
Sbjct: 61  TVQVQSLDNSYKGRKTDLSLQ 81




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