Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= F54C9_5
(882 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17534333|ref|NP_495811.1| ribosomal Protein, Large subunit (3... 495 e-139
gi|39587115|emb|CAE57582.1| Hypothetical protein CBG00561 [Caeno... 473 e-132
gi|6094084|sp|O76190|RL5_BOMMO 60S RIBOSOMAL PROTEIN L5 >gnl|BL_... 318 1e-85
gi|17945758|gb|AAL48927.1| RE33114p [Drosophila melanogaster] >g... 318 1e-85
gi|22758888|gb|AAN05603.1| ribosomal protein L5 [Argopecten irra... 315 1e-84
gi|45383023|ref|NP_989912.1| ribosomal protein L5 [Gallus gallus... 314 2e-84
gi|2500286|sp|Q26481|RL5_STYCL 60S RIBOSOMAL PROTEIN L5 >gnl|BL_... 312 5e-84
gi|14591909|ref|NP_000960.2| ribosomal protein L5; 60S ribosomal... 312 5e-84
gi|27371036|gb|AAH41227.1| MGC52733 protein [Xenopus laevis] 311 1e-83
gi|47218878|emb|CAG05644.1| unnamed protein product [Tetraodon n... 310 2e-83
gi|1173054|sp|P46777|RL5_HUMAN 60S ribosomal protein L5 >gnl|BL_... 310 2e-83
gi|27503217|gb|AAH42258.1| MGC53393 protein [Xenopus laevis] 310 3e-83
gi|13592051|ref|NP_112361.1| ribosomal protein L5 [Rattus norveg... 309 5e-83
gi|50344868|ref|NP_001002106.1| zgc:86854 [Danio rerio] >gnl|BL_... 309 6e-83
gi|40642990|emb|CAD91421.1| ribosomal protein L5 [Crassostrea gi... 308 8e-83
gi|132983|sp|P15125|RL5A_XENLA 60S RIBOSOMAL PROTEIN L5A >gnl|BL... 308 1e-82
gi|6094086|sp|O65353|RL5_HELAN 60S RIBOSOMAL PROTEIN L5 >gnl|BL_... 308 1e-82
gi|23956082|ref|NP_058676.1| ribosomal protein L5 [Mus musculus]... 308 1e-82
gi|132984|sp|P15126|RL5B_XENLA 60S RIBOSOMAL PROTEIN L5B >gnl|BL... 308 1e-82
gi|47215976|emb|CAF96378.1| unnamed protein product [Tetraodon n... 307 2e-82
gi|45360909|ref|NP_988881.1| hypothetical protein MGC75757 [Xeno... 306 5e-82
gi|29841176|gb|AAP06189.1| similar to GenBank Accession Number L... 305 7e-82
gi|206734|gb|AAA42074.1| ribosomal protein L5 305 7e-82
gi|15293873|gb|AAK95129.1| ribosomal protein L5b [Ictalurus punc... 305 1e-81
gi|15293871|gb|AAK95128.1| ribosomal protein L5a [Ictalurus punc... 305 1e-81
gi|41054305|ref|NP_956050.1| ribosomal protein L5; mg:cb01f08 [D... 300 3e-80
gi|44966788|gb|AAS49559.1| ribosomal protein L5 [Latimeria chalu... 300 3e-80
gi|3914745|sp|O44248|RL5_ANOGA 60S RIBOSOMAL PROTEIN L5 >gnl|BL_... 298 1e-79
gi|5007074|gb|AAD37804.1| ribosomal protein L5 [Myxine glutinosa] 296 3e-79
gi|33772505|gb|AAQ54654.1| 60S ribosomal protein L5 [Oikopleura ... 295 7e-79
gi|31238477|ref|XP_319782.1| ENSANGP00000005182 [Anopheles gambi... 295 7e-79
gi|44966839|gb|AAS49560.1| ribosomal protein L5 [Protopterus dol... 295 7e-79
gi|3915826|sp|P49625|RL5_ORYSA 60S RIBOSOMAL PROTEIN L5 295 9e-79
gi|28630253|gb|AAN73355.1| ribosomal protein L5 [Branchiostoma l... 294 2e-78
gi|34878317|ref|XP_212693.2| similar to 60S RIBOSOMAL PROTEIN L5... 292 6e-78
gi|28630257|gb|AAN73357.1| ribosomal protein L5 [Scyliorhinus ca... 290 2e-77
gi|38084073|ref|XP_129001.2| similar to 60S ribosomal protein L5... 288 8e-77
gi|542157|pir||S39486 ribosomal protein L5 - rice 286 9e-76
gi|34907624|ref|NP_915159.1| putative 60S ribosomal protein L5 [... 285 9e-76
gi|34484312|gb|AAQ72789.1| 60S ribosomal protein L5 [Cucumis sat... 285 1e-75
gi|34907622|ref|NP_915158.1| putative 60S ribosomal protein L5 [... 284 2e-75
gi|18404552|ref|NP_566767.1| 60S ribosomal protein L5 [Arabidops... 282 6e-75
gi|15242467|ref|NP_198790.1| 60S ribosomal protein L5 (RPL5B) [A... 281 1e-74
gi|21592804|gb|AAM64753.1| ribosomal protein, putative [Arabidop... 281 2e-74
gi|38047859|gb|AAR09832.1| similar to Drosophila melanogaster yi... 276 6e-73
gi|38084600|ref|XP_204230.2| similar to 60S ribosomal protein L5... 273 4e-72
gi|32406116|ref|XP_323671.1| 60S RIBOSOMAL PROTEIN L5 (CPR4) [Ne... 267 2e-70
gi|45185790|ref|NP_983506.1| ACR104Cp [Eremothecium gossypii] >g... 265 8e-70
gi|34869606|ref|XP_233179.2| similar to 60S RIBOSOMAL PROTEIN L5... 264 2e-69
gi|46226516|gb|EAK87510.1| 60S ribosomal protein L5 [Cryptospori... 264 2e-69
gi|19577350|emb|CAD28431.1| probable 60S ribosomal protein l5 [A... 264 2e-69
gi|49086166|ref|XP_405150.1| RL5_NEUCR 60S ribosomal protein L5 ... 263 3e-69
gi|38111060|gb|EAA56693.1| hypothetical protein MG07048.4 [Magna... 262 8e-69
gi|50306789|ref|XP_453370.1| unnamed protein product [Kluyveromy... 259 4e-68
gi|50294105|ref|XP_449464.1| unnamed protein product [Candida gl... 256 4e-67
gi|38048341|gb|AAR10073.1| similar to Drosophila melanogaster yi... 256 5e-67
gi|46136989|ref|XP_390186.1| RL5_NEUCR 60S ribosomal protein L5 ... 255 8e-67
gi|50259370|gb|EAL22043.1| hypothetical protein CNBC1810 [Crypto... 255 1e-66
gi|50553706|ref|XP_504264.1| hypothetical protein [Yarrowia lipo... 254 2e-66
gi|133003|sp|P26321|RL5_YEAST 60S ribosomal protein L5 (L1) (YL3... 252 7e-66
gi|6325126|ref|NP_015194.1| Protein component of the large (60S)... 252 7e-66
gi|49076578|ref|XP_402249.1| hypothetical protein UM04634.1 [Ust... 251 2e-65
gi|29248518|gb|EAA40050.1| GLP_387_52446_51553 [Giardia lamblia ... 250 3e-65
gi|19115092|ref|NP_594180.1| 60s ribosomal protein L5 [Schizosac... 249 7e-65
gi|19113191|ref|NP_596399.1| 60s ribosomal protein l5.; 60s ribo... 246 4e-64
gi|6094085|sp|O22608|RL5_DUNSA 60S RIBOSOMAL PROTEIN L5 >gnl|BL_... 246 5e-64
gi|50427933|ref|XP_462579.1| unnamed protein product [Debaryomyc... 245 1e-63
gi|46442756|gb|EAL02043.1| hypothetical protein CaO19.13894 [Can... 244 2e-63
gi|23482807|gb|EAA18681.1| Ribosomal L18p/L5e family, putative [... 242 9e-63
gi|23509452|ref|NP_702119.1| Ribosomal protein family L5, putati... 242 9e-63
gi|27883562|gb|AAO25760.1| ribosomal protein L5b [Ictalurus punc... 237 2e-61
gi|1206017|gb|AAB05674.1| ribosomal protein L5 237 3e-61
gi|30923540|gb|EAA46018.1| CG17489-PE.3 [Drosophila melanogaster... 229 5e-59
gi|49258843|pdb|1S1I|E Chain E, Structure Of The Ribosomal 80s-E... 228 1e-58
gi|42415363|gb|AAS15651.1| SD13191p [Drosophila melanogaster] 225 1e-57
gi|41209887|ref|XP_371470.1| similar to ribosomal protein L5; 60... 224 1e-57
gi|28630255|gb|AAN73356.1| ribosomal protein L5 [Petromyzon mari... 224 3e-57
gi|21483852|gb|AAM52989.1| ribosomal protein L5 [Equus caballus] 218 1e-55
gi|13359453|dbj|BAB33422.1| putative senescence-associated prote... 218 2e-55
gi|21206611|gb|AAM33437.1| ribosomal protein L5 [Branchiostoma b... 211 2e-53
gi|42491225|dbj|BAD10929.1| ribosomal protein L5 [Trichomonas va... 207 2e-52
gi|2350904|dbj|BAA21984.1| ribosomal protein L5 [Entamoeba histo... 191 2e-47
gi|2350902|dbj|BAA21983.1| ribosomal protein L5 [Entamoeba histo... 190 3e-47
gi|11276728|pir||T43382 ribosomal protein L5 - fission yeast (Sc... 182 1e-44
gi|34880636|ref|XP_346314.1| similar to ribosomal protein L5 [Ra... 181 2e-44
gi|19074340|ref|NP_585846.1| 60S RIBOSOMAL PROTEIN L5 [Encephali... 174 2e-42
gi|2500285|sp|Q95276|RL5_PIG 60S RIBOSOMAL PROTEIN L5 167 4e-40
gi|12804869|gb|AAH01882.1| RPL5 protein [Homo sapiens] 159 8e-38
gi|6752674|gb|AAF27819.1| yippee interacting protein 6 [Drosophi... 152 1e-35
gi|41148447|ref|XP_372036.1| similar to 60S ribosomal protein L5... 137 3e-31
gi|41196207|ref|XP_371846.1| similar to ribosomal protein L5; 60... 130 3e-29
gi|41200428|ref|XP_372396.1| similar to ribosomal protein L5; 60... 123 6e-27
gi|1658578|gb|AAB18361.1| ribosomal L5 protein [Homo sapiens] 122 1e-26
gi|13812421|ref|NP_113539.1| 60S ribosomal protein L5 [Guillardi... 121 2e-26
gi|34875555|ref|XP_224484.2| similar to ribosomal protein L5 [Ra... 120 4e-26
gi|23598388|gb|AAN35165.1| 60S ribosomal protein L5 [Euprymna sc... 118 2e-25
gi|30923539|gb|EAA46017.1| CG17489-PC.3 [Drosophila melanogaster... 117 3e-25
gi|18313098|ref|NP_559765.1| ribosomal protein L18 [Pyrobaculum ... 117 3e-25
gi|14600651|ref|NP_147168.1| 50S ribosomal protein L18 [Aeropyru... 114 2e-24
gi|15668651|ref|NP_247450.1| LSU ribosomal protein L18P [Methano... 113 5e-24
gi|41614871|ref|NP_963369.1| NEQ075 [Nanoarchaeum equitans Kin4-... 112 1e-23
gi|34852590|ref|XP_345098.1| similar to 60S RIBOSOMAL PROTEIN L5... 111 2e-23
gi|14591515|ref|NP_143596.1| 50S ribosomal protein L18 [Pyrococc... 109 9e-23
gi|13124816|sp|O59438|RL18_PYRHO 50S ribosomal protein L18P 108 2e-22
gi|20093470|ref|NP_613317.1| Ribosomal protein L18 [Methanopyrus... 107 3e-22
gi|18978177|ref|NP_579534.1| LSU ribosomal protein L18P [Pyrococ... 107 5e-22
gi|15678053|ref|NP_275167.1| ribosomal protein L5 [Methanothermo... 105 1e-21
gi|15897605|ref|NP_342210.1| LSU ribosomal protein L18AB (rpl18A... 105 1e-21
gi|14520538|ref|NP_126013.1| LSU ribosomal protein L18P [Pyrococ... 105 2e-21
gi|15920623|ref|NP_376292.1| 196aa long hypothetical 50S ribosom... 102 1e-20
gi|132730|sp|P14033|RL18_METVA 50S RIBOSOMAL PROTEIN L18P >gnl|B... 100 7e-20
gi|45358981|ref|NP_988538.1| LSU ribosomal protein L18P [Methano... 100 7e-20
gi|15790651|ref|NP_280475.1| 50S ribosomal protein L18P; Rpl18p ... 91 3e-17
gi|48429069|sp||P19949_1 [Segment 1 of 2] 60S ribosomal protein ... 91 3e-17
gi|3914679|sp|O05640|RL18_SULAC 50S ribosomal protein L18P >gnl|... 89 1e-16
gi|41718242|ref|ZP_00147299.1| COG0256: Ribosomal protein L18 [M... 87 6e-16
gi|10120930|pdb|1FFK|K Chain K, Crystal Structure Of The Large R... 85 2e-15
gi|11499490|ref|NP_070731.1| LSU ribosomal protein L18P (rpl18P)... 85 2e-15
gi|132729|sp|P14123|RL18_HALMA 50S ribosomal protein L18P (Hmal1... 85 2e-15
gi|48838702|ref|ZP_00295642.1| COG0256: Ribosomal protein L18 [M... 82 2e-14
gi|21228245|ref|NP_634167.1| LSU ribosomal protein L18P [Methano... 82 2e-14
gi|20089961|ref|NP_616036.1| ribosomal protein L18p [Methanosarc... 81 3e-14
gi|3914771|sp|P93779|RL5_SOLME 60S RIBOSOMAL PROTEIN L5 >gnl|BL_... 75 2e-12
gi|34877118|ref|XP_224593.2| similar to 60S ribosomal protein L5... 74 6e-12
gi|13541175|ref|NP_110863.1| 50S ribosomal protein L18 [Thermopl... 67 4e-10
gi|7440743|pir||S50100 ribosomal protein L5, cytosolic - mouse (... 60 5e-08
gi|969022|gb|AAC59694.1| ribosomal protein L5 57 7e-07
gi|10640598|emb|CAC12376.1| probable 50S ribosomal protein L18 [... 54 4e-06
gi|16082602|ref|NP_394708.1| 50S ribosomal protein L18 [Thermopl... 54 4e-06
gi|619504|emb|CAA58570.1| ribosomal protein L5 [Mus musculus] 52 2e-05
gi|2982315|gb|AAC32143.1| probable 60S ribosomal protein L5 [Pic... 49 1e-04
gi|48477731|ref|YP_023437.1| large subunit ribosomal protein L18... 46 0.001
gi|10177500|dbj|BAB10894.1| 60S ribosomal protein L5 [Arabidopsi... 45 0.003
gi|223936|prf||1005199A ribosomal protein C term,5S RNA binding 40 0.068
gi|48852507|ref|ZP_00306693.1| COG0256: Ribosomal protein L18 [F... 40 0.089
gi|29348210|ref|NP_811713.1| inositol-1-monophosphatase [Bactero... 36 0.99
gi|38089985|ref|XP_357963.1| similar to 60S ribosomal protein L5... 36 1.3
gi|46878747|emb|CAG27603.1| glucansucrase [Lactobacillus animalis] 35 1.7
gi|123213|sp|P29143|HLY_HAL17 Halolysin precursor (F-II) >gnl|BL... 35 2.9
gi|5019954|gb|AAD37936.1| P protein [Hepatitis B virus] 34 3.8
gi|34394536|dbj|BAC83841.1| late embryogenesis abundant proteins... 34 4.9
gi|15840290|ref|NP_335327.1| conserved hypothetical protein [Myc... 33 6.4
gi|31792064|ref|NP_854557.1| POSSIBLE CONSERVED TRANSMEMBRANE PR... 33 6.4
gi|15608016|ref|NP_215391.1| hypothetical protein Rv0876c [Mycob... 33 6.4
gi|50758168|ref|XP_415792.1| PREDICTED: similar to delta-2-cryst... 33 6.4
gi|14017768|dbj|BAB47406.1| FLJ10111 [Mus musculus] 33 8.4
gi|23489823|gb|EAA21739.1| hypothetical protein [Plasmodium yoel... 33 8.4
gi|40254409|ref|NP_919327.2| cDNA sequence BC031509 [Mus musculu... 33 8.4
gi|33943730|gb|AAQ55547.1| putative Ariadne-like ubiquitin ligas... 33 8.4
>gi|17534333|ref|NP_495811.1| ribosomal Protein, Large subunit (33.4
kD) (rpl-5) [Caenorhabditis elegans]
gi|1350756|sp|P49405|RL5_CAEEL 60S ribosomal protein L5
gi|7504154|pir||T22631 hypothetical protein F54C9.5 -
Caenorhabditis elegans
gi|3877501|emb|CAA90251.1| C. elegans RPL-5 protein (corresponding
sequence F54C9.5) [Caenorhabditis elegans]
Length = 293
Score = 495 bits (1275), Expect = e-139
Identities = 251/280 (89%), Positives = 251/280 (89%)
Frame = +1
Query: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 180
MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 181 VAQLAYSKIEGDVVVASAYSHELPRYGLKVXXXXXXXXXXXXXXXXRRHLKTIGLDSTYK 360
VAQLAYSKIEGDVVVASAYSHELPRYGLKV RRHLKTIGLDSTYK
Sbjct: 61 VAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYK 120
Query: 361 GHEELTGEDYNVEEEGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRFF 540
GHEELTGEDYNVEEEGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRFF
Sbjct: 121 GHEELTGEDYNVEEEGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRFF 180
Query: 541 GFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQFSKFLAAGLNADNLVATYQ 720
GFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQFSKFLAAGLNADNLVATYQ
Sbjct: 181 GFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQFSKFLAAGLNADNLVATYQ 240
Query: 721 KVHSAIRADXXXXXXXXXXXXXRHTAKRLTYDERKQRVAD 840
KVHSAIRAD RHTAKRLTYDERKQRVAD
Sbjct: 241 KVHSAIRADASPAAKKAAKPSKRHTAKRLTYDERKQRVAD 280