Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= F54E4_5
(879 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17568133|ref|NP_510433.1| putative membrane protein (XP252) [... 523 e-147
gi|39596590|emb|CAE63209.1| Hypothetical protein CBG07564 [Caeno... 398 e-110
gi|18029268|gb|AAL56446.1| similar to M-phase phosphoprotein [Oi... 39 0.20
gi|40556366|ref|NP_955006.1| leucine rich repeat and sterile alp... 37 0.44
gi|34853657|ref|XP_231157.2| hypothetical protein XP_231157 [Rat... 37 0.44
gi|26452595|dbj|BAC43381.1| unknown protein [Arabidopsis thaliana] 36 0.98
gi|46308238|ref|ZP_00210432.1| COG0143: Methionyl-tRNA synthetas... 36 1.3
gi|16551669|dbj|BAB71144.1| unnamed protein product [Homo sapiens] 35 1.7
gi|16551542|dbj|BAB71119.1| unnamed protein product [Homo sapiens] 35 1.7
gi|31543097|ref|NP_612370.2| leucine rich repeat and sterile alp... 35 1.7
gi|37182778|gb|AAQ89189.1| leucine-rich protein [Homo sapiens] 35 1.7
gi|14328050|gb|AAH09239.1| LRSAM1 protein [Homo sapiens] 35 1.7
gi|47497301|dbj|BAD19343.1| unknown protein [Oryza sativa (japon... 35 2.9
gi|32484231|gb|AAH54212.1| MGC64388 protein [Xenopus laevis] 34 3.7
gi|23478309|gb|EAA15432.1| hypothetical protein [Plasmodium yoel... 34 4.9
gi|46432886|gb|EAK92349.1| hypothetical protein CaO19.6355 [Cand... 34 4.9
gi|23478561|gb|EAA15613.1| SNF2 family N-terminal domain, putati... 33 6.4
gi|31324517|gb|AAM76278.1| PtmD [Campylobacter coli] 33 6.4
gi|34393510|dbj|BAC83071.1| unknown protein [Oryza sativa (japon... 33 6.4
gi|40538794|ref|NP_073615.2| hypothetical protein DKFZp434L0117 ... 33 8.3
gi|23509909|ref|NP_702576.1| hypothetical protein [Plasmodium fa... 33 8.3
gi|10438238|dbj|BAB15203.1| unnamed protein product [Homo sapien... 33 8.3
gi|6320336|ref|NP_010416.1| Hypothetical ORF; Ydr131cp [Saccharo... 33 8.3
>gi|17568133|ref|NP_510433.1| putative membrane protein (XP252)
[Caenorhabditis elegans]
gi|7504204|pir||T22665 hypothetical protein F54E4.3 -
Caenorhabditis elegans
gi|3877590|emb|CAB01917.1| Hypothetical protein F54E4.3
[Caenorhabditis elegans]
Length = 292
Score = 523 bits (1346), Expect = e-147
Identities = 264/292 (90%), Positives = 264/292 (90%)
Frame = -1
Query: 879 MNLQFLASIRILPILLIGLTSAQDEVSQCNYVGLVKCFINILDEWAWTLYELKENVVTIT 700
MNLQFLASIRILPILLIGLTSAQDEVSQCNYVGLVKCFINILDEWAWTLYELKENVVTIT
Sbjct: 1 MNLQFLASIRILPILLIGLTSAQDEVSQCNYVGLVKCFINILDEWAWTLYELKENVVTIT 60
Query: 699 QDQCEHLKELDKCIKDDLPVAHQCSHNEVVQVSNTVSDLLTHRKDSGSFLRSYYLLTYSC 520
QDQCEHLKELDKCIKDDLPVAHQCSHNEVVQVSNTVSDLLTHRKDSGSFLRSYYLLTYSC
Sbjct: 61 QDQCEHLKELDKCIKDDLPVAHQCSHNEVVQVSNTVSDLLTHRKDSGSFLRSYYLLTYSC 120
Query: 519 SVEGQEILSKHRDCLKSEKIGEMTLSAGTYLSEKFLEHSQDDVCEAVNRKLQEYISLLAV 340
SVEGQEILSKHRDCLKSEKIGEMTLSAGTYLSEKFLEHSQDDVCEAVNRKLQEYISLLAV
Sbjct: 121 SVEGQEILSKHRDCLKSEKIGEMTLSAGTYLSEKFLEHSQDDVCEAVNRKLQEYISLLAV 180
Query: 339 FAGLHADKLDSCVLDCKIPENNDEESKEEVALTSDAQDEENLEQQQSEQDALRPADXXXX 160
FAGLHADKLDSCVLDCKIPENNDEESKEEVALTSDAQDEENLEQQQSEQDALRPAD
Sbjct: 181 FAGLHADKLDSCVLDCKIPENNDEESKEEVALTSDAQDEENLEQQQSEQDALRPADSSSI 240
Query: 159 XXXXXXXXFYDHQLYAXXXXXXXXXXXXXXXXSHMSFALSIIILCFSTDGIW 4
FYDHQLYA SHMSFALSIIILCFSTDGIW
Sbjct: 241 AFSLFSIIFYDHQLYAFVVNFSSNSKSSPDFFSHMSFALSIIILCFSTDGIW 292