Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= F54F2_2
         (636 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|22096390|sp|P34449|YM2B_CAEEL Hypothetical protein F54F2.2 in...   420   e-116
gi|630639|pir||S44829 F54F2.4 protein - Caenorhabditis elegans        407   e-113
gi|39585083|emb|CAE62734.1| Hypothetical protein CBG06896 [Caeno...    86   5e-16
gi|39591655|emb|CAE71232.1| Hypothetical protein CBG18102 [Caeno...    35   1.6
gi|32475037|ref|NP_868031.1| putative serine/threonine-protein k...    35   1.6
gi|9627984|ref|NP_042582.1| replicase [Bamboo mosaic virus] >gnl...    34   2.7
gi|17466913|gb|AAL40030.1| hypothetical protein [Bamboo mosaic v...    34   2.7
gi|2407619|gb|AAB70562.1| replicase [Bamboo mosaic virus]              34   2.7
gi|5730348|gb|AAD48523.1| replication protein [Bamboo mosaic virus]    34   2.7
gi|31228187|ref|XP_318013.1| ENSANGP00000011424 [Anopheles gambi...    34   2.7
gi|34558064|ref|NP_907879.1| conserved hypothetical protein [Wol...    34   2.7
gi|7498493|pir||T20517 hypothetical protein F02E9.8 - Caenorhabd...    33   3.5
gi|15220876|ref|NP_173230.1| nascent polypeptide-associated comp...    33   3.5
gi|39581185|emb|CAE73590.1| Hypothetical protein CBG21072 [Caeno...    33   3.5
gi|17537095|ref|NP_496576.1| putative protein (2M406) [Caenorhab...    33   3.5
gi|17553662|ref|NP_498615.1| predicted CDS, reverse transcriptas...    33   3.5
gi|4456235|emb|CAB37026.1| glycoprotein B [Human herpesvirus 5]        33   3.5
gi|17539028|ref|NP_501121.1| predicted CDS, reverse transcriptas...    33   3.5
gi|16801898|ref|NP_472166.1| similar to autolysin, N-acetylmuram...    33   6.0
gi|39584244|emb|CAE65408.1| Hypothetical protein CBG10360 [Caeno...    33   6.0
gi|50549699|ref|XP_502320.1| hypothetical protein [Yarrowia lipo...    33   6.0
gi|17509647|ref|NP_491432.1| predicted CDS, putative membrane pr...    32   7.8
gi|19703357|ref|NP_602919.1| Jag protein [Fusobacterium nucleatu...    32   7.8
gi|42783558|ref|NP_980805.1| lysM domain protein [Bacillus cereu...    32   7.8


>gi|22096390|sp|P34449|YM2B_CAEEL Hypothetical protein F54F2.2 in
           chromosome III, isoform b
 gi|13435307|gb|AAK26139.1| Zinc finger protein protein 1, isoform b
           [Caenorhabditis elegans]
          Length = 211

 Score =  420 bits (1080), Expect = e-116
 Identities = 211/211 (100%), Positives = 211/211 (100%)
 Frame = +1

Query: 1   MGKRSVSMFLIDISLFLLLGTLIVACTVKKEKIKERHNHNRTLLKRTVGGKRKDTGHRHR 180
           MGKRSVSMFLIDISLFLLLGTLIVACTVKKEKIKERHNHNRTLLKRTVGGKRKDTGHRHR
Sbjct: 1   MGKRSVSMFLIDISLFLLLGTLIVACTVKKEKIKERHNHNRTLLKRTVGGKRKDTGHRHR 60

Query: 181 TSTIPPRDKSSLHAPTVKNGNSLSAVEPNGRIKIGYRLSPSVKKGEIVAPKATVTPAVNT 360
           TSTIPPRDKSSLHAPTVKNGNSLSAVEPNGRIKIGYRLSPSVKKGEIVAPKATVTPAVNT
Sbjct: 61  TSTIPPRDKSSLHAPTVKNGNSLSAVEPNGRIKIGYRLSPSVKKGEIVAPKATVTPAVNT 120

Query: 361 RKPINEAISEGIILDPTYFKNGGNLDSKSPKNQKLAEELQQFIDNPGLGSNETSTLTDDN 540
           RKPINEAISEGIILDPTYFKNGGNLDSKSPKNQKLAEELQQFIDNPGLGSNETSTLTDDN
Sbjct: 121 RKPINEAISEGIILDPTYFKNGGNLDSKSPKNQKLAEELQQFIDNPGLGSNETSTLTDDN 180

Query: 541 DVPRVVAVPSQCKMFETTNQPTNSQLLLNSE 633
           DVPRVVAVPSQCKMFETTNQPTNSQLLLNSE
Sbjct: 181 DVPRVVAVPSQCKMFETTNQPTNSQLLLNSE 211




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