Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= F55F8_7
(2613 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17508517|ref|NP_491658.1| PaTched Related (ptr-10) [Caenorhab... 1703 0.0
gi|7504317|pir||T29590 hypothetical protein F55F8.1 - Caenorhabd... 1691 0.0
gi|50058060|gb|AAB37812.3| Patched related family protein 10 [Ca... 1635 0.0
gi|39598248|emb|CAE68940.1| Hypothetical protein CBG14920 [Caeno... 1511 0.0
gi|17508515|ref|NP_491221.1| PaTched Related (104.4 kD) (ptr-2) ... 856 0.0
gi|39586255|emb|CAE66666.1| Hypothetical protein CBG12004 [Caeno... 853 0.0
gi|39596623|emb|CAE63242.1| Hypothetical protein CBG07607 [Caeno... 439 e-121
gi|17562808|ref|NP_505380.1| PaTched Related (ptr-1) [Caenorhabd... 428 e-118
gi|39594547|emb|CAE72125.1| Hypothetical protein CBG19221 [Caeno... 425 e-117
gi|17508523|ref|NP_493245.1| PaTched Related (ptr-17) [Caenorhab... 423 e-116
gi|17569155|ref|NP_510472.1| abnormal DAuer Formation DAF-6, PaT... 421 e-116
gi|39592388|emb|CAE63465.1| Hypothetical protein CBG07932 [Caeno... 400 e-110
gi|39596845|emb|CAE59072.1| Hypothetical protein CBG02358 [Caeno... 390 e-106
gi|17535383|ref|NP_494986.1| PaTched Related (ptr-6) [Caenorhabd... 384 e-105
gi|45550365|ref|NP_610209.2| CG11212-PA [Drosophila melanogaster... 378 e-103
gi|50732655|ref|XP_425978.1| PREDICTED: similar to CG11212-PA [G... 347 6e-94
gi|17554416|ref|NP_499380.1| PaTched Related (ptr-19) [Caenorhab... 341 6e-92
gi|39591824|emb|CAE71402.1| Hypothetical protein CBG18310 [Caeno... 341 6e-92
gi|47228003|emb|CAF97632.1| unnamed protein product [Tetraodon n... 321 5e-86
gi|39594397|emb|CAE71975.1| Hypothetical protein CBG19049 [Caeno... 316 2e-84
gi|32698450|emb|CAA22312.2| Hypothetical protein Y18D10A.7 [Caen... 311 1e-83
gi|38092633|ref|XP_109751.2| RIKEN cDNA 4930451E13 [Mus musculus] 310 9e-83
gi|17562810|ref|NP_504760.1| PaTched Related (ptr-15) [Caenorhab... 309 3e-82
gi|39588499|emb|CAE58022.1| Hypothetical protein CBG01094 [Caeno... 306 1e-81
gi|17562812|ref|NP_503388.1| PaTched Related (ptr-16) [Caenorhab... 303 1e-80
gi|38422462|emb|CAA21636.2| Hypothetical protein Y38F1A.3 [Caeno... 295 4e-78
gi|39597175|emb|CAE59402.1| Hypothetical protein CBG02766 [Caeno... 291 4e-77
gi|17535389|ref|NP_496761.1| PaTched Related (90.8 kD) (ptr-18) ... 291 4e-77
gi|39598167|emb|CAE68859.1| Hypothetical protein CBG14821 [Caeno... 275 4e-72
gi|25147620|ref|NP_509013.2| PaTched Related (110.8 kD) (ptr-4) ... 271 4e-71
gi|39580224|emb|CAE72980.1| Hypothetical protein CBG20322 [Caeno... 247 1e-63
gi|17562814|ref|NP_507690.1| PaTched Related (ptr-22) [Caenorhab... 244 6e-63
gi|17535391|ref|NP_497114.1| PaTched Related (ptr-20) [Caenorhab... 234 8e-60
gi|39597497|emb|CAE59727.1| Hypothetical protein CBG03163 [Caeno... 226 3e-57
gi|34880608|ref|XP_228985.2| similar to hypothetical protein FLJ... 223 2e-56
gi|38086898|ref|XP_142262.3| similar to hypothetical protein FLJ... 223 2e-56
gi|25147623|ref|NP_510810.2| PaTched Related (ptr-5) [Caenorhabd... 220 1e-55
gi|31746661|gb|AAB42308.4| Patched related family protein 5 [Cae... 220 1e-55
gi|7497280|pir||T28706 hypothetical protein C41D7.2 - Caenorhabd... 220 2e-55
gi|17535381|ref|NP_493718.1| PaTched Related (ptr-3) [Caenorhabd... 220 2e-55
gi|48140454|ref|XP_397117.1| similar to CG11212-PA [Apis mellifera] 219 3e-55
gi|26331156|dbj|BAC29308.1| unnamed protein product [Mus musculus] 218 4e-55
gi|47222488|emb|CAG13008.1| unnamed protein product [Tetraodon n... 217 1e-54
gi|39596050|emb|CAE69686.1| Hypothetical protein CBG15941 [Caeno... 216 2e-54
gi|27735091|ref|NP_775766.1| hypothetical protein FLJ30296 [Homo... 214 6e-54
gi|39586853|emb|CAE62788.1| Hypothetical protein CBG06961 [Caeno... 213 1e-53
gi|31205209|ref|XP_311553.1| ENSANGP00000010114 [Anopheles gambi... 212 4e-53
gi|17541728|ref|NP_501963.1| PaTched Related (ptr-14) [Caenorhab... 209 3e-52
gi|39581855|emb|CAE60748.1| Hypothetical protein CBG04434 [Caeno... 204 7e-51
gi|39594536|emb|CAE72114.1| Hypothetical protein CBG19208 [Caeno... 203 2e-50
gi|50745312|ref|XP_420069.1| PREDICTED: similar to dJ402H5.2 (no... 187 1e-45
gi|34874791|ref|XP_236961.2| similar to dJ402H5.2 (novel protein... 185 5e-45
gi|12853786|dbj|BAB29848.1| unnamed protein product [Mus musculus] 183 2e-44
gi|39584430|emb|CAE72568.1| Hypothetical protein CBG19753 [Caeno... 182 5e-44
gi|39585878|emb|CAE61292.1| Hypothetical protein CBG05116 [Caeno... 182 5e-44
gi|17508527|ref|NP_493603.1| PaTched Related (111.8 kD) (ptr-23)... 178 7e-43
gi|47210139|emb|CAF91283.1| unnamed protein product [Tetraodon n... 174 7e-42
gi|34532356|dbj|BAC86399.1| unnamed protein product [Homo sapiens] 174 7e-42
gi|47221124|emb|CAG05445.1| unnamed protein product [Tetraodon n... 169 2e-40
gi|39595501|emb|CAE60539.1| Hypothetical protein CBG04166 [Caeno... 168 7e-40
gi|38082553|ref|XP_140020.2| similar to dJ402H5.2 (novel protein... 166 3e-39
gi|17508525|ref|NP_490751.1| PaTched Related (ptr-21) [Caenorhab... 166 3e-39
gi|12214288|emb|CAC21688.1| dJ402H5.2 (novel protein similar to ... 164 1e-38
gi|41149372|ref|XP_370541.1| similar to PaTched Related (104.4 k... 163 2e-38
gi|31242457|ref|XP_321659.1| ENSANGP00000011713 [Anopheles gambi... 162 5e-38
gi|39585014|emb|CAE62665.1| Hypothetical protein CBG06803 [Caeno... 161 6e-38
gi|48060436|gb|AAF39911.3| Patched related family protein 12 [Ca... 157 9e-37
gi|50730194|ref|XP_425565.1| PREDICTED: similar to hypothetical ... 157 2e-36
gi|25143167|ref|NP_491005.2| PaTched Related (ptr-12) [Caenorhab... 155 5e-36
gi|17554414|ref|NP_499030.1| PaTched Related (ptr-9) [Caenorhabd... 154 1e-35
gi|46134229|ref|XP_389430.1| hypothetical protein FG09254.1 [Gib... 153 2e-35
gi|46227691|gb|EAK88611.1| putative patched family protein with ... 151 9e-35
gi|6694422|gb|AAF25228.1| NPC1 protein [Dictyostelium discoideum... 147 1e-33
gi|7497872|pir||T25657 hypothetical protein C53C11.3 - Caenorhab... 147 1e-33
gi|39591183|emb|CAE73236.1| Hypothetical protein CBG20645 [Caeno... 145 5e-33
gi|38102306|gb|EAA49161.1| hypothetical protein MG00819.4 [Magna... 144 8e-33
gi|17508519|ref|NP_490687.1| PaTched Related (90.7 kD) (ptr-11) ... 140 2e-31
gi|39597328|emb|CAE59556.1| Hypothetical protein CBG02953 [Caeno... 137 1e-30
gi|17535387|ref|NP_496392.1| PaTched Related (ptr-13) [Caenorhab... 132 4e-29
gi|39585870|emb|CAE61284.1| Hypothetical protein CBG05104 [Caeno... 132 4e-29
gi|48140791|ref|XP_397156.1| similar to CG11212-PA [Apis mellifera] 124 2e-26
gi|50737130|ref|XP_419162.1| PREDICTED: similar to Niemann-Pick ... 122 4e-26
gi|17535375|ref|NP_495218.1| patched family member (ptc-2) [Caen... 121 1e-25
gi|4557803|ref|NP_000262.1| Niemann-Pick disease, type C1 [Homo ... 117 2e-24
gi|38649260|gb|AAH63302.1| Niemann-Pick disease, type C1 [Homo s... 117 2e-24
gi|47523702|ref|NP_999487.1| Niemann-Pick C disease protein [Sus... 116 3e-24
gi|20531740|gb|AAM27450.1| mutant Niemann-Pick C1 [Felis catus] 114 1e-23
gi|20531742|gb|AAM27451.1| Niemann-Pick C1 [Felis catus] 114 1e-23
gi|11878263|gb|AAG40873.1| Niemann-Pick type C1 disease protein ... 113 3e-23
gi|20857246|ref|XP_137497.1| similar to NPC1 (Niemann-Pick disea... 112 3e-23
gi|46402233|ref|NP_997125.1| NPC1 (Niemann-Pick disease, type C1... 112 3e-23
gi|8099648|gb|AAF72187.1| Niemann-Pick type C1 disease protein; ... 112 6e-23
gi|6581072|gb|AAF18444.1| Niemann-Pick type C1 disease protein [... 111 1e-22
gi|50300485|ref|NP_001002025.1| NPC1 (Niemann-Pick disease, type... 111 1e-22
gi|30851359|gb|AAH52437.1| Niemann Pick type C1 [Mus musculus] >... 110 2e-22
gi|33589358|gb|AAQ22446.1| RE56428p [Drosophila melanogaster] 110 2e-22
gi|6679104|ref|NP_032746.1| Niemann Pick type C1; sphingomyelino... 109 3e-22
gi|24583258|ref|NP_609357.2| CG5722-PA [Drosophila melanogaster]... 108 9e-22
gi|31223553|ref|XP_317322.1| ENSANGP00000010415 [Anopheles gambi... 107 1e-21
gi|48096803|ref|XP_392524.1| similar to ENSANGP00000010415 [Apis... 107 2e-21
gi|38345936|emb|CAD41413.2| OSJNBb0078D11.11 [Oryza sativa (japo... 106 2e-21
gi|5921280|emb|CAB56505.1| NPC1 protein [Drosophila melanogaster] 105 4e-21
gi|48094777|ref|XP_394262.1| similar to ENSANGP00000011713 [Apis... 103 2e-20
gi|17535385|ref|NP_496343.1| PaTched Related (ptr-8) [Caenorhabd... 103 3e-20
gi|6934272|gb|AAF31692.1| Niemann-Pick type C1 protein [Cricetul... 102 6e-20
gi|42562545|ref|NP_174975.2| patched family protein [Arabidopsis... 100 1e-19
gi|32405592|ref|XP_323409.1| hypothetical protein [Neurospora cr... 100 1e-19
gi|42567506|ref|NP_195548.2| patched family protein [Arabidopsis... 100 2e-19
gi|41350387|gb|AAR97886.1| Niemann-Pick C1-like 1 [Homo sapiens]... 100 2e-19
gi|7019469|ref|NP_037521.1| NPC1 (Niemann-Pick disease, type C1,... 100 2e-19
gi|7485950|pir||T05663 hypothetical protein F22I13.120 - Arabido... 99 4e-19
gi|27807461|ref|NP_777183.1| Niemann-Pick disease, type C1 [Bos ... 99 7e-19
gi|23613434|ref|NP_703278.1| patched family protein, putative [P... 99 7e-19
gi|12322632|gb|AAG51318.1| unknown protein, 5' partial [Arabidop... 96 6e-18
gi|50549181|ref|XP_502061.1| hypothetical protein [Yarrowia lipo... 95 1e-17
gi|48094409|ref|XP_394168.1| similar to ENSANGP00000011713 [Apis... 94 2e-17
gi|47223010|emb|CAG07097.1| unnamed protein product [Tetraodon n... 94 2e-17
gi|47228251|emb|CAG07646.1| unnamed protein product [Tetraodon n... 92 8e-17
gi|50312503|ref|XP_456287.1| unnamed protein product [Kluyveromy... 91 1e-16
gi|45384440|ref|NP_990291.1| patched protein [Gallus gallus] >gn... 91 1e-16
gi|31203089|ref|XP_310493.1| ENSANGP00000007352 [Anopheles gambi... 91 2e-16
gi|24643595|ref|NP_608417.1| CG12092-PA [Drosophila melanogaster... 89 5e-16
gi|50420269|ref|XP_458667.1| unnamed protein product [Debaryomyc... 89 7e-16
gi|11463863|dbj|BAB18575.1| patched-2 [Xenopus laevis] 89 7e-16
gi|49088982|ref|XP_406256.1| hypothetical protein AN2119.2 [Aspe... 88 9e-16
gi|17535373|ref|NP_495662.1| patched family member (ptc-1) [Caen... 88 9e-16
gi|6679519|ref|NP_032983.1| patched; Patched 1; mesenchymal dysp... 87 2e-15
gi|6325251|ref|NP_015319.1| A transmembrane glycoprotein that is... 86 3e-15
gi|39930495|ref|NP_446018.1| patched (Drosophila) homolog [Rattu... 86 3e-15
gi|48139426|ref|XP_397007.1| similar to putative hedgehog recept... 86 3e-15
gi|13434992|dbj|BAB18574.2| patched-1 [Xenopus laevis] 86 5e-15
gi|39597594|emb|CAE59824.1| Hypothetical protein CBG03294 [Caeno... 86 5e-15
gi|13194564|gb|AAK15463.1| patched-1 [Xenopus laevis] 86 5e-15
gi|47506910|gb|AAH70995.1| Unknown (protein for MGC:79874) [Xeno... 85 1e-14
gi|4539024|emb|CAB39726.1| patched-2 protein [Danio rerio] 85 1e-14
gi|34873568|ref|XP_214413.2| similar to patched [Rattus norvegicus] 84 1e-14
gi|4506247|ref|NP_000255.1| patched; patched (Drosophila) homolo... 84 1e-14
gi|1335864|gb|AAC50496.1| patched gene homolog; similar to Droso... 84 2e-14
gi|15426026|gb|AAK97655.1| patched 2 [Gallus gallus] 82 7e-14
gi|50258193|gb|EAL20887.1| hypothetical protein CNBE2480 [Crypto... 82 9e-14
gi|6841051|gb|AAF28875.1| Niemann-Pick C1 disease protein [Homo ... 81 1e-13
gi|45201088|ref|NP_986658.1| AGL008Wp [Eremothecium gossypii] >g... 81 1e-13
gi|37182233|gb|AAQ88919.1| Patched 2 [Homo sapiens] 80 2e-13
gi|4325111|gb|AAD17260.1| patched 2 [Homo sapiens] 80 2e-13
gi|3929235|gb|AAC79847.1| receptor protein patched 2 [Homo sapie... 80 2e-13
gi|22538486|ref|NP_003729.2| patched 2; patched (Drosophila) hom... 80 2e-13
gi|4588015|gb|AAD25953.1| patched 2 [Homo sapiens] 80 2e-13
gi|12643356|sp|Q9Y6C5|PTC2_HUMAN Patched protein homolog 2 (PTC2... 80 2e-13
gi|46436645|gb|EAK96004.1| hypothetical protein CaO19.7242 [Cand... 80 2e-13
gi|34870361|ref|XP_345571.1| similar to putative twelve transmem... 80 2e-13
gi|552099|gb|AAA28696.1| membrane protein 79 4e-13
gi|24586628|ref|NP_523661.2| CG2411-PA [Drosophila melanogaster]... 79 4e-13
gi|23478744|gb|EAA15748.1| Drosophila melanogaster CG11212 gene ... 79 4e-13
gi|6679517|ref|NP_032984.1| patched homolog 2 [Mus musculus] >gn... 79 6e-13
gi|17537719|ref|NP_494383.1| patched family member (ptc-3) [Caen... 79 6e-13
gi|17537717|ref|NP_494384.1| patched family member (ptc-3) [Caen... 79 6e-13
gi|18859285|ref|NP_571063.1| patched1; etID309849.2 [Danio rerio... 78 9e-13
gi|50293501|ref|XP_449162.1| unnamed protein product [Candida gl... 78 9e-13
gi|226505|prf||1515355A patched gene 78 1e-12
gi|85054|pir||S06119 membrane protein patched - fruit fly (Droso... 78 1e-12
gi|39584667|emb|CAE72420.1| Hypothetical protein CBG19582 [Caeno... 76 4e-12
gi|50751494|ref|XP_422426.1| PREDICTED: similar to patched 2 [Ga... 75 1e-11
gi|4883640|gb|AAD31595.1| putative hedgehog receptor [Junonia co... 74 2e-11
gi|38489135|gb|AAR21239.1| patched [Homo sapiens] 72 9e-11
gi|12856242|dbj|BAB30614.1| unnamed protein product [Mus musculus] 71 2e-10
gi|39596750|emb|CAE63369.1| Hypothetical protein CBG07780 [Caeno... 71 2e-10
gi|7498484|pir||T15961 hypothetical protein F02E8.6 - Caenorhabd... 71 2e-10
gi|17569119|ref|NP_508771.1| Niemann-Pick (human disease) type C... 71 2e-10
gi|39597909|emb|CAE68601.1| Hypothetical protein CBG14473 [Caeno... 71 2e-10
gi|4092050|gb|AAC99398.1| patched [Rattus norvegicus] 70 2e-10
gi|46228654|gb|EAK89524.1| niemann-Pick type C1 disease protein/... 70 3e-10
gi|31227677|ref|XP_317925.1| ENSANGP00000011383 [Anopheles gambi... 68 1e-09
gi|49069812|ref|XP_399195.1| hypothetical protein UM01580.1 [Ust... 68 1e-09
gi|31200733|ref|XP_309314.1| ENSANGP00000018415 [Anopheles gambi... 67 3e-09
gi|6643038|gb|AAF20397.1| truncated Niemann-Pick C1-like protein... 66 4e-09
gi|47212609|emb|CAF93285.1| unnamed protein product [Tetraodon n... 64 1e-08
gi|6691199|gb|AAF24537.1| F7F22.1 [Arabidopsis thaliana] 64 1e-08
gi|38383088|gb|AAH62344.1| Unknown (protein for MGC:71108) [Homo... 63 4e-08
gi|47564088|ref|NP_001001144.1| SREBP cleavage activating protei... 61 2e-07
gi|23593606|ref|XP_135190.2| similar to SREBP cleavage activatin... 61 2e-07
gi|50510409|dbj|BAD32190.1| mKIAA0199 protein [Mus musculus] 61 2e-07
gi|28573975|ref|NP_788277.1| CG33131-PA [Drosophila melanogaster... 60 3e-07
gi|20378357|gb|AAM20923.1| ER-golgi escort protein [Drosophila m... 60 3e-07
gi|34866374|ref|XP_217279.2| similar to SREBP cleavage activatin... 59 5e-07
gi|30923298|sp|Q12770|SCAP_HUMAN Sterol regulatory element bindi... 59 5e-07
gi|34189617|gb|AAH27207.1| SCAP protein [Homo sapiens] 59 5e-07
gi|20521844|dbj|BAA12111.2| the KIAA0199 gene is expressed ubiqu... 59 5e-07
gi|39594070|emb|CAE70180.1| Hypothetical protein CBG16653 [Caeno... 59 6e-07
gi|17368397|sp|P97260|SCAP_CRIGR Sterol regulatory element bindi... 59 6e-07
gi|49071804|ref|XP_400191.1| hypothetical protein UM02576.1 [Ust... 58 1e-06
gi|49257414|gb|AAH72950.1| Unknown (protein for IMAGE:4888068) [... 56 5e-06
gi|47198640|emb|CAG14178.1| unnamed protein product [Tetraodon n... 55 7e-06
gi|47086441|ref|NP_997965.1| dispatched homolog 1 [Danio rerio] ... 54 2e-05
gi|17554358|ref|NP_498813.1| Niemann-Pick (human disease) type C... 54 2e-05
gi|630596|pir||S44795 F09G8.3 protein - Caenorhabditis elegans 54 2e-05
gi|34881200|ref|XP_213964.2| similar to dispatched [Rattus norve... 52 6e-05
gi|23092587|gb|AAN08631.1| DISP1 [Mus musculus] 52 7e-05
gi|27695402|gb|AAH43102.1| Disp1-pending protein [Mus musculus] ... 52 7e-05
gi|24762223|ref|NP_081142.1| dispatched homolog 1; dispatched A;... 52 7e-05
gi|26983974|gb|AAN64660.1| dispatched [Mus musculus] 52 7e-05
gi|50740212|ref|XP_419396.1| PREDICTED: similar to dispatched A ... 52 7e-05
gi|16415986|emb|CAB88621.2| related to SREBP cleavage activating... 51 2e-04
gi|32404728|ref|XP_322977.1| related to SREBP cleavage activatin... 51 2e-04
gi|31208109|ref|XP_313021.1| ENSANGP00000011300 [Anopheles gambi... 50 2e-04
gi|11360045|pir||T42693 hypothetical protein DKFZp434I0428.1 - h... 50 2e-04
gi|10438861|dbj|BAB15365.1| unnamed protein product [Homo sapiens] 50 2e-04
gi|25952134|ref|NP_116279.2| dispatched A [Homo sapiens] 50 2e-04
gi|48257180|gb|AAH11542.2| Unknown (protein for IMAGE:3855477) [... 50 2e-04
gi|10435677|dbj|BAB14637.1| unnamed protein product [Homo sapiens] 50 2e-04
gi|48099767|ref|XP_394934.1| similar to ENSANGP00000018415 [Apis... 50 3e-04
gi|25150419|ref|NP_510222.2| PaTched Related (ptr-24) [Caenorhab... 50 4e-04
gi|45272118|gb|AAR02862.2| HMG-CoA reductase [Dicentrarchus labrax] 48 0.001
gi|39580631|emb|CAE72907.1| Hypothetical protein CBG20225 [Caeno... 48 0.001
gi|47213283|emb|CAF92135.1| unnamed protein product [Tetraodon n... 48 0.001
gi|42657658|ref|XP_376505.1| similar to hypothetical protein FLJ... 48 0.001
gi|38082493|ref|XP_203689.2| RIKEN cDNA 3110082D06 [Mus musculus] 47 0.002
gi|14590211|ref|NP_142276.1| hypothetical protein PH0287 [Pyroco... 47 0.003
gi|17508513|ref|NP_491673.1| disPaTchED family member, sterol-se... 46 0.004
gi|7504454|pir||T33156 hypothetical protein F56H1.1 - Caenorhabd... 46 0.004
gi|42528204|ref|NP_973302.1| membrane protein, putative [Trepone... 46 0.004
gi|7498176|pir||T20342 hypothetical protein D2013.8 - Caenorhabd... 46 0.005
gi|32564619|ref|NP_495989.2| SREBP Cleavage activating Protein h... 46 0.005
gi|14521877|ref|NP_127353.1| Transport protein [Pyrococcus abyss... 45 0.007
gi|17507645|ref|NP_491654.1| CBF1 interacting corepressor (65.8 ... 45 0.009
gi|24649399|ref|NP_732900.1| CG10367-PA [Drosophila melanogaster... 45 0.009
gi|21707182|gb|AAH33692.1| HMGCR protein [Homo sapiens] 44 0.015
gi|90238|pir||A23586 hydroxymethylglutaryl-CoA reductase (EC 1.1... 44 0.015
gi|1708252|sp|P51639|HMDH_RAT 3-hydroxy-3-methylglutaryl-coenzym... 44 0.015
gi|123344|sp|P09610|HMDH_MESAU 3-hydroxy-3-methylglutaryl-coenzy... 44 0.015
gi|40538852|ref|NP_037266.2| 3-hydroxy-3-methylglutaryl-Coenzyme... 44 0.015
gi|123341|sp|P00347|HMDH_CRIGR 3-hydroxy-3-methylglutaryl-coenzy... 44 0.015
gi|38075036|ref|XP_127496.2| 3-hydroxy-3-methylglutaryl-Coenzyme... 44 0.015
gi|4557643|ref|NP_000850.1| 3-hydroxy-3-methylglutaryl-Coenzyme ... 44 0.015
gi|2495262|sp|Q29512|HMDH_RABIT 3-hydroxy-3-methylglutaryl-coenz... 44 0.015
gi|42783943|ref|NP_981190.1| membrane protein, putative [Bacillu... 44 0.015
gi|47228449|emb|CAG05269.1| unnamed protein product [Tetraodon n... 44 0.020
gi|39591879|emb|CAE71457.1| Hypothetical protein CBG18375 [Caeno... 44 0.026
gi|45383193|ref|NP_989816.1| 3-hydroxy-3-methylglutaryl-CoA redu... 43 0.034
gi|49257596|gb|AAH74197.1| Unknown (protein for MGC:82101) [Xeno... 43 0.034
gi|123347|sp|P20715|HMDH_XENLA 3-hydroxy-3-methylglutaryl-coenzy... 43 0.034
gi|18976634|ref|NP_577991.1| mfs transporter [Pyrococcus furiosu... 43 0.034
gi|38489136|gb|AAR21240.1| patched [Homo sapiens] 42 0.057
gi|7503305|pir||T20370 hypothetical protein F43D9.1 - Caenorhabd... 42 0.057
gi|32564198|ref|NP_499313.2| patched family member (137.9 kD) (3... 42 0.057
gi|47058959|ref|NP_997599.1| dispatched homolog 2; dispatched 2 ... 42 0.075
gi|19113465|ref|NP_596673.1| hypothetical protein [Schizosacchar... 42 0.098
gi|15643580|ref|NP_228626.1| hypothetical protein TM0817 [Thermo... 42 0.098
gi|47551099|ref|NP_999724.1| HMGCoA reductase [Strongylocentrotu... 41 0.13
gi|20091049|ref|NP_617124.1| protein export membrane protein [Me... 41 0.13
gi|39595886|emb|CAE67389.1| Hypothetical protein CBG12874 [Caeno... 41 0.17
gi|123342|sp|P14773|HMDH_DROME 3-hydroxy-3-methylglutaryl-coenzy... 41 0.17
gi|48782777|ref|ZP_00279257.1| COG0841: Cation/multidrug efflux ... 41 0.17
gi|21227655|ref|NP_633577.1| transporter, RND superfamily [Metha... 41 0.17
gi|48856683|ref|ZP_00310840.1| COG4258: Predicted exporter [Cyto... 40 0.22
gi|13474810|ref|NP_106380.1| RND efflux transporter [Mesorhizobi... 40 0.22
gi|20089037|ref|NP_615112.1| protein-export membrane protein Sec... 40 0.28
gi|28804827|dbj|BAC57975.1| patched [Paralichthys olivaceus] 40 0.28
gi|45359087|ref|NP_988644.1| SecD/SecF/SecDF export membrane pro... 40 0.28
gi|50877726|emb|CAG37566.1| related to cobalt-zinc-cadmium resis... 40 0.37
gi|38111612|gb|EAA57166.1| hypothetical protein MG08135.4 [Magna... 40 0.37
gi|15644049|ref|NP_229098.1| conserved hypothetical protein [The... 40 0.37
gi|20089295|ref|NP_615370.1| conserved hypothetical protein [Met... 40 0.37
gi|8886084|gb|AAF80373.1| HMG-CoA reductase [Dendroctonus jeffre... 40 0.37
gi|15925542|ref|NP_373076.1| hypothetical protein SAV2552 [Staph... 39 0.49
gi|48831706|ref|ZP_00288761.1| COG1033: Predicted exporters of t... 39 0.49
gi|50258912|gb|EAL21593.1| hypothetical protein CNBC6310 [Crypto... 39 0.49
gi|21284202|ref|NP_647290.1| ORFID:MW2473~hypothetical protein, ... 39 0.63
gi|38232873|ref|NP_938640.1| Putative membrane protein [Coryneba... 39 0.63
gi|25121980|ref|NP_277045.1| dispatched B [Homo sapiens] 39 0.83
gi|49484753|ref|YP_041977.1| putative transport protein [Staphyl... 39 0.83
gi|32476399|ref|NP_869393.1| similar to integral membrane protei... 39 0.83
gi|20521982|dbj|BAB21833.2| KIAA1742 protein [Homo sapiens] 39 0.83
gi|50552167|ref|XP_503558.1| hypothetical protein [Yarrowia lipo... 39 0.83
gi|50554869|ref|XP_504843.1| hypothetical protein [Yarrowia lipo... 39 0.83
gi|1708251|sp|P54960|HMDH_BLAGE 3-hydroxy-3-methylglutaryl-coenz... 38 1.1
gi|422383|pir||S30338 hydroxymethylglutaryl-CoA reductase (NADPH... 38 1.1
gi|23482363|gb|EAA18366.1| DNA polymerase epsilon subunit b [Pla... 38 1.4
gi|50294131|ref|XP_449477.1| unnamed protein product [Candida gl... 38 1.4
gi|15678868|ref|NP_275985.1| protein-export membrane protein, Se... 37 1.8
gi|11132855|sp|O76819|HMDH_AGRIP 3-hydroxy-3-methylglutaryl-coen... 37 1.8
gi|50732653|ref|XP_425977.1| PREDICTED: similar to CG11212-PA [G... 37 2.4
gi|34856689|ref|XP_230531.2| similar to dispatched B [Rattus nor... 37 3.1
gi|39936545|ref|NP_948821.1| RND efflux transporter [Rhodopseudo... 36 4.1
gi|21244574|ref|NP_644156.1| acriflavin resistance protein [Xant... 36 4.1
gi|33867179|ref|NP_898737.1| putative membrane transport protein... 36 5.4
gi|24528557|ref|NP_733481.1| dispatched homolog 2; dispatched B ... 36 5.4
gi|113032|sp|P15479|ACEA_RICCO Isocitrate lyase (Isocitrase) (Is... 36 5.4
gi|21228954|ref|NP_634876.1| Membrane protein related to SecD/Se... 36 5.4
gi|22761730|dbj|BAC11673.1| unnamed protein product [Homo sapiens] 36 5.4
gi|28972826|dbj|BAC65829.1| mKIAA1742 protein [Mus musculus] 36 5.4
gi|24307943|ref|NP_036367.1| SREBP CLEAVAGE-ACTIVATING PROTEIN [... 35 7.0
gi|18088701|gb|AAH20987.1| SCAP protein [Homo sapiens] 35 7.0
gi|46126145|ref|XP_387626.1| hypothetical protein FG07450.1 [Gib... 35 7.0
gi|15610288|ref|NP_217668.1| nuoH [Mycobacterium tuberculosis H3... 35 9.2
gi|29833489|ref|NP_828123.1| putative amino acid permease [Strep... 35 9.2
>gi|17508517|ref|NP_491658.1| PaTched Related (ptr-10) [Caenorhabditis
elegans]
Length = 870
Score = 1703 bits (4410), Expect = 0.0
Identities = 850/870 (97%), Positives = 850/870 (97%)
Frame = +1
Query: 1 MEIYVFLEMQSSEMLGDVAVANVVYSLLMIFGPYSYTERRIIHDAWPLVDGTFVAGRAVT 180
MEIYVFLEMQSSEMLGDVAVANVVYSLLMIFGPYSYTERRIIHDAWPLVDGTFVAGRAVT
Sbjct: 1 MEIYVFLEMQSSEMLGDVAVANVVYSLLMIFGPYSYTERRIIHDAWPLVDGTFVAGRAVT 60
Query: 181 QSREVQVAVVARSGGNILDRVFSNELKLMESFIRNNITVQFSNRTWSFADLCLAGPDGRC 360
QSREVQVAVVARSGGNILDRVFSNELKLMESFIRNNITVQFSNRTWSFADLCLAGPDGRC
Sbjct: 61 QSREVQVAVVARSGGNILDRVFSNELKLMESFIRNNITVQFSNRTWSFADLCLAGPDGRC 120
Query: 361 ANNDHIQLASRLHQHGINITYPTVRLSDKSAYIASALGGVKLAKGDNGENIIVEATAWLL 540
ANNDHIQLASRLHQHGINITYPTVRLSDKSAYIASALGGVKLAKGDNGENIIVEATAWLL
Sbjct: 121 ANNDHIQLASRLHQHGINITYPTVRLSDKSAYIASALGGVKLAKGDNGENIIVEATAWLL 180
Query: 541 IYQLKFYPNEISYVSGLWEREFKNKMDEYKKQAKYISITYFHSQTLSDELNRNAERLAPK 720
IYQLKFYPNEISYVSGLWEREFKNKMDEYKKQAKYISITYFHSQTLSDELNRNAERLAPK
Sbjct: 181 IYQLKFYPNEISYVSGLWEREFKNKMDEYKKQAKYISITYFHSQTLSDELNRNAERLAPK 240
Query: 721 FIGAFVILVCFSVLCSIVTIKGSGYIDWVVTKPILSVLGVSNAGMGIASAMGMLTYLEIQ 900
FIGAFVILVCFSVLCSIVTIKGSGYIDWVVTKPILSVLGVSNAGMGIASAMGMLTYLEIQ
Sbjct: 241 FIGAFVILVCFSVLCSIVTIKGSGYIDWVVTKPILSVLGVSNAGMGIASAMGMLTYLEIQ 300
Query: 901 YNDIIAVMPFLVVAVGTDNMFLMVASLKRTDRNLKYDQRIAECMADAAVSILITALTDAL 1080
YNDIIAVMPFLVVAVGTDNMFLMVASLKRTDRNLKYDQRIAECMADAAVSILITALTDAL
Sbjct: 301 YNDIIAVMPFLVVAVGTDNMFLMVASLKRTDRNLKYDQRIAECMADAAVSILITALTDAL 360
Query: 1081 SFGVGTITTIPAVQIFCIYTMCALLLTFAYQLTFFCAILVYYTRIEEQGLHSIWLRPAVT 1260
SFGVGTITTIPAVQIFCIYTMCALLLTFAYQLTFFCAILVYYTRIEEQGLHSIWLRPAVT
Sbjct: 361 SFGVGTITTIPAVQIFCIYTMCALLLTFAYQLTFFCAILVYYTRIEEQGLHSIWLRPAVT 420
Query: 1261 YSSTSPLNVKLFWLGSQPQKPLPXXXXXXXXXXXXXXXXXXXXPASKHLHHCAATSFFRN 1440
YSSTSPLNVKLFWLGSQPQKPLP PASKHLHHCAATSFFRN
Sbjct: 421 YSSTSPLNVKLFWLGSQPQKPLPSCGTVSSTSSVSTMTSQATSPASKHLHHCAATSFFRN 480
Query: 1441 WYAPVLMQPWIRAIAGLWYLIYLGISIYGCTHLKEGLEPANLLVDDSYATPHYRVLEKHY 1620
WYAPVLMQPWIRAIAGLWYLIYLGISIYGCTHLKEGLEPANLLVDDSYATPHYRVLEKHY
Sbjct: 481 WYAPVLMQPWIRAIAGLWYLIYLGISIYGCTHLKEGLEPANLLVDDSYATPHYRVLEKHY 540
Query: 1621 WHYGASLQIVVSNPPDLRDPVERINMDKMASTFANCKVAIGDDSVQFWLREMQVSEEIHK 1800
WHYGASLQIVVSNPPDLRDPVERINMDKMASTFANCKVAIGDDSVQFWLREMQVSEEIHK
Sbjct: 541 WHYGASLQIVVSNPPDLRDPVERINMDKMASTFANCKVAIGDDSVQFWLREMQVSEEIHK 600
Query: 1801 IQYDNEKFYDHAAQYIYSDMSQPWVVDVVWGRNNNSERIIKTFRFMIGMRDISTTTKQTE 1980
IQYDNEKFYDHAAQYIYSDMSQPWVVDVVWGRNNNSERIIKTFRFMIGMRDISTTTKQTE
Sbjct: 601 IQYDNEKFYDHAAQYIYSDMSQPWVVDVVWGRNNNSERIIKTFRFMIGMRDISTTTKQTE 660
Query: 1981 ATNTFREIASRFEQYNVTTYMPLWLFTDQYALVVPNTMQDIIVAVACMLVISALLIPQPV 2160
ATNTFREIASRFEQYNVTTYMPLWLFTDQYALVVPNTMQDIIVAVACMLVISALLIPQPV
Sbjct: 661 ATNTFREIASRFEQYNVTTYMPLWLFTDQYALVVPNTMQDIIVAVACMLVISALLIPQPV 720
Query: 2161 CSFWVAVTIGSIDLGVLGFMTLWNVNLDAISMITIIMSVGFSVDYSAHITYAYVISKEST 2340
CSFWVAVTIGSIDLGVLGFMTLWNVNLDAISMITIIMSVGFSVDYSAHITYAYVISKEST
Sbjct: 721 CSFWVAVTIGSIDLGVLGFMTLWNVNLDAISMITIIMSVGFSVDYSAHITYAYVISKEST 780
Query: 2341 TSARVCDALGDLGWPVAQGAMSTILAVSVLSDVPAYMIVTFFKTVFLAISIGFLHGLVFL 2520
TSARVCDALGDLGWPVAQGAMSTILAVSVLSDVPAYMIVTFFKTVFLAISIGFLHGLVFL
Sbjct: 781 TSARVCDALGDLGWPVAQGAMSTILAVSVLSDVPAYMIVTFFKTVFLAISIGFLHGLVFL 840
Query: 2521 PLMLSVFVGCCSSNKIETKSVKEPRFVGRY 2610
PLMLSVFVGCCSSNKIETKSVKEPRFVGRY
Sbjct: 841 PLMLSVFVGCCSSNKIETKSVKEPRFVGRY 870
>gi|7504317|pir||T29590 hypothetical protein F55F8.1 - Caenorhabditis
elegans
Length = 889
Score = 1691 bits (4380), Expect = 0.0
Identities = 850/889 (95%), Positives = 850/889 (95%), Gaps = 19/889 (2%)
Frame = +1
Query: 1 MEIYVFLEMQSSEMLGDVAVANVVYSLLMIFGPYSYTERRIIHDAWPLVDGTFVAGRAVT 180
MEIYVFLEMQSSEMLGDVAVANVVYSLLMIFGPYSYTERRIIHDAWPLVDGTFVAGRAVT
Sbjct: 1 MEIYVFLEMQSSEMLGDVAVANVVYSLLMIFGPYSYTERRIIHDAWPLVDGTFVAGRAVT 60
Query: 181 QSREVQVAVVARSGGNILDRVFSNELKLMESFIRNNITVQFSNRTWSFADLCLAGPDGRC 360
QSREVQVAVVARSGGNILDRVFSNELKLMESFIRNNITVQFSNRTWSFADLCLAGPDGRC
Sbjct: 61 QSREVQVAVVARSGGNILDRVFSNELKLMESFIRNNITVQFSNRTWSFADLCLAGPDGRC 120
Query: 361 ANNDHIQLASRLHQHGINITYPTVRLSDKSAYIASALGGVKLAKGDNGENIIVEATAWLL 540
ANNDHIQLASRLHQHGINITYPTVRLSDKSAYIASALGGVKLAKGDNGENIIVEATAWLL
Sbjct: 121 ANNDHIQLASRLHQHGINITYPTVRLSDKSAYIASALGGVKLAKGDNGENIIVEATAWLL 180
Query: 541 IYQLKFYPNEISYVSGLWEREFKNKMDEYKKQAKYISITYFHSQTLSDELNRNAERLAPK 720
IYQLKFYPNEISYVSGLWEREFKNKMDEYKKQAKYISITYFHSQTLSDELNRNAERLAPK
Sbjct: 181 IYQLKFYPNEISYVSGLWEREFKNKMDEYKKQAKYISITYFHSQTLSDELNRNAERLAPK 240
Query: 721 FIGAFVILVCFSVLCSIVTIKGSGYIDWVVTKPILSVLGVSNAGMGIASAMGMLTYLEIQ 900
FIGAFVILVCFSVLCSIVTIKGSGYIDWVVTKPILSVLGVSNAGMGIASAMGMLTYLEIQ
Sbjct: 241 FIGAFVILVCFSVLCSIVTIKGSGYIDWVVTKPILSVLGVSNAGMGIASAMGMLTYLEIQ 300
Query: 901 YNDIIAVMPFLVVAVGTDNMFLMVASLKRTDRNLKYDQRIAECMADAAVSILITALTDAL 1080
YNDIIAVMPFLVVAVGTDNMFLMVASLKRTDRNLKYDQRIAECMADAAVSILITALTDAL
Sbjct: 301 YNDIIAVMPFLVVAVGTDNMFLMVASLKRTDRNLKYDQRIAECMADAAVSILITALTDAL 360
Query: 1081 SFGVGTITTIPAVQIFCIYTMCALLLTFAYQLTFFCAILVYYTRIEEQGLHSIWLRPAVT 1260
SFGVGTITTIPAVQIFCIYTMCALLLTFAYQLTFFCAILVYYTRIEEQGLHSIWLRPAVT
Sbjct: 361 SFGVGTITTIPAVQIFCIYTMCALLLTFAYQLTFFCAILVYYTRIEEQGLHSIWLRPAVT 420
Query: 1261 YSSTSPLNVKLFWLGSQPQKPLPXXXXXXXXXXXXXXXXXXXXPASKHLHHCAATSFFRN 1440
YSSTSPLNVKLFWLGSQPQKPLP PASKHLHHCAATSFFRN
Sbjct: 421 YSSTSPLNVKLFWLGSQPQKPLPSCGTVSSTSSVSTMTSQATSPASKHLHHCAATSFFRN 480
Query: 1441 WYAPVLMQPWIRAIAGLWYLIYLGISIYGCTHLKEGLEPANLLVDDSYATPHYRVLEKHY 1620
WYAPVLMQPWIRAIAGLWYLIYLGISIYGCTHLKEGLEPANLLVDDSYATPHYRVLEKHY
Sbjct: 481 WYAPVLMQPWIRAIAGLWYLIYLGISIYGCTHLKEGLEPANLLVDDSYATPHYRVLEKHY 540
Query: 1621 WHYGASLQIVVSNPPDLRDPVERINMDKMASTFANCKVAIGDDSVQFWLREMQVSEEIHK 1800
WHYGASLQIVVSNPPDLRDPVERINMDKMASTFANCKVAIGDDSVQFWLREMQVSEEIHK
Sbjct: 541 WHYGASLQIVVSNPPDLRDPVERINMDKMASTFANCKVAIGDDSVQFWLREMQVSEEIHK 600
Query: 1801 IQYDNEKFYDHAAQYIYSDMSQPWVVDVVWGRNNNSERIIKTFRFMIGMRDISTTTKQTE 1980
IQYDNEKFYDHAAQYIYSDMSQPWVVDVVWGRNNNSERIIKTFRFMIGMRDISTTTKQTE
Sbjct: 601 IQYDNEKFYDHAAQYIYSDMSQPWVVDVVWGRNNNSERIIKTFRFMIGMRDISTTTKQTE 660
Query: 1981 ATNTFREIASRFEQYNVTTYMPLWLFTDQYALVVPNTMQDIIVAVACMLVISALLIPQPV 2160
ATNTFREIASRFEQYNVTTYMPLWLFTDQYALVVPNTMQDIIVAVACMLVISALLIPQPV
Sbjct: 661 ATNTFREIASRFEQYNVTTYMPLWLFTDQYALVVPNTMQDIIVAVACMLVISALLIPQPV 720
Query: 2161 CSFWVAVTIGSIDLGVLGFMTLWNVNLDAISMITIIMSVGFSVDYSAHITYAYVISKEST 2340
CSFWVAVTIGSIDLGVLGFMTLWNVNLDAISMITIIMSVGFSVDYSAHITYAYVISKEST
Sbjct: 721 CSFWVAVTIGSIDLGVLGFMTLWNVNLDAISMITIIMSVGFSVDYSAHITYAYVISKEST 780
Query: 2341 TSARVCDALGDLGWPVAQGAMSTILAVSVLSDVPAYMIVTFFKTVFLAISIGFLHGLVFL 2520
TSARVCDALGDLGWPVAQGAMSTILAVSVLSDVPAYMIVTFFKTVFLAISIGFLHGLVFL
Sbjct: 781 TSARVCDALGDLGWPVAQGAMSTILAVSVLSDVPAYMIVTFFKTVFLAISIGFLHGLVFL 840
Query: 2521 PLMLSVFV-------------------GCCSSNKIETKSVKEPRFVGRY 2610
PLMLSVFV GCCSSNKIETKSVKEPRFVGRY
Sbjct: 841 PLMLSVFVGKIFDIHISNISIKYCIYLGCCSSNKIETKSVKEPRFVGRY 889
>gi|50058060|gb|AAB37812.3| Patched related family protein 10
[Caenorhabditis elegans]
Length = 900
Score = 1635 bits (4233), Expect = 0.0
Identities = 815/836 (97%), Positives = 815/836 (97%)
Frame = +1
Query: 103 SYTERRIIHDAWPLVDGTFVAGRAVTQSREVQVAVVARSGGNILDRVFSNELKLMESFIR 282
S TERRIIHDAWPLVDGTFVAGRAVTQSREVQVAVVARSGGNILDRVFSNELKLMESFIR
Sbjct: 65 SKTERRIIHDAWPLVDGTFVAGRAVTQSREVQVAVVARSGGNILDRVFSNELKLMESFIR 124
Query: 283 NNITVQFSNRTWSFADLCLAGPDGRCANNDHIQLASRLHQHGINITYPTVRLSDKSAYIA 462
NNITVQFSNRTWSFADLCLAGPDGRCANNDHIQLASRLHQHGINITYPTVRLSDKSAYIA
Sbjct: 125 NNITVQFSNRTWSFADLCLAGPDGRCANNDHIQLASRLHQHGINITYPTVRLSDKSAYIA 184
Query: 463 SALGGVKLAKGDNGENIIVEATAWLLIYQLKFYPNEISYVSGLWEREFKNKMDEYKKQAK 642
SALGGVKLAKGDNGENIIVEATAWLLIYQLKFYPNEISYVSGLWEREFKNKMDEYKKQAK
Sbjct: 185 SALGGVKLAKGDNGENIIVEATAWLLIYQLKFYPNEISYVSGLWEREFKNKMDEYKKQAK 244
Query: 643 YISITYFHSQTLSDELNRNAERLAPKFIGAFVILVCFSVLCSIVTIKGSGYIDWVVTKPI 822
YISITYFHSQTLSDELNRNAERLAPKFIGAFVILVCFSVLCSIVTIKGSGYIDWVVTKPI
Sbjct: 245 YISITYFHSQTLSDELNRNAERLAPKFIGAFVILVCFSVLCSIVTIKGSGYIDWVVTKPI 304
Query: 823 LSVLGVSNAGMGIASAMGMLTYLEIQYNDIIAVMPFLVVAVGTDNMFLMVASLKRTDRNL 1002
LSVLGVSNAGMGIASAMGMLTYLEIQYNDIIAVMPFLVVAVGTDNMFLMVASLKRTDRNL
Sbjct: 305 LSVLGVSNAGMGIASAMGMLTYLEIQYNDIIAVMPFLVVAVGTDNMFLMVASLKRTDRNL 364
Query: 1003 KYDQRIAECMADAAVSILITALTDALSFGVGTITTIPAVQIFCIYTMCALLLTFAYQLTF 1182
KYDQRIAECMADAAVSILITALTDALSFGVGTITTIPAVQIFCIYTMCALLLTFAYQLTF
Sbjct: 365 KYDQRIAECMADAAVSILITALTDALSFGVGTITTIPAVQIFCIYTMCALLLTFAYQLTF 424
Query: 1183 FCAILVYYTRIEEQGLHSIWLRPAVTYSSTSPLNVKLFWLGSQPQKPLPXXXXXXXXXXX 1362
FCAILVYYTRIEEQGLHSIWLRPAVTYSSTSPLNVKLFWLGSQPQKPLP
Sbjct: 425 FCAILVYYTRIEEQGLHSIWLRPAVTYSSTSPLNVKLFWLGSQPQKPLPSCGTVSSTSSV 484
Query: 1363 XXXXXXXXXPASKHLHHCAATSFFRNWYAPVLMQPWIRAIAGLWYLIYLGISIYGCTHLK 1542
PASKHLHHCAATSFFRNWYAPVLMQPWIRAIAGLWYLIYLGISIYGCTHLK
Sbjct: 485 STMTSQATSPASKHLHHCAATSFFRNWYAPVLMQPWIRAIAGLWYLIYLGISIYGCTHLK 544
Query: 1543 EGLEPANLLVDDSYATPHYRVLEKHYWHYGASLQIVVSNPPDLRDPVERINMDKMASTFA 1722
EGLEPANLLVDDSYATPHYRVLEKHYWHYGASLQIVVSNPPDLRDPVERINMDKMASTFA
Sbjct: 545 EGLEPANLLVDDSYATPHYRVLEKHYWHYGASLQIVVSNPPDLRDPVERINMDKMASTFA 604
Query: 1723 NCKVAIGDDSVQFWLREMQVSEEIHKIQYDNEKFYDHAAQYIYSDMSQPWVVDVVWGRNN 1902
NCKVAIGDDSVQFWLREMQVSEEIHKIQYDNEKFYDHAAQYIYSDMSQPWVVDVVWGRNN
Sbjct: 605 NCKVAIGDDSVQFWLREMQVSEEIHKIQYDNEKFYDHAAQYIYSDMSQPWVVDVVWGRNN 664
Query: 1903 NSERIIKTFRFMIGMRDISTTTKQTEATNTFREIASRFEQYNVTTYMPLWLFTDQYALVV 2082
NSERIIKTFRFMIGMRDISTTTKQTEATNTFREIASRFEQYNVTTYMPLWLFTDQYALVV
Sbjct: 665 NSERIIKTFRFMIGMRDISTTTKQTEATNTFREIASRFEQYNVTTYMPLWLFTDQYALVV 724
Query: 2083 PNTMQDIIVAVACMLVISALLIPQPVCSFWVAVTIGSIDLGVLGFMTLWNVNLDAISMIT 2262
PNTMQDIIVAVACMLVISALLIPQPVCSFWVAVTIGSIDLGVLGFMTLWNVNLDAISMIT
Sbjct: 725 PNTMQDIIVAVACMLVISALLIPQPVCSFWVAVTIGSIDLGVLGFMTLWNVNLDAISMIT 784
Query: 2263 IIMSVGFSVDYSAHITYAYVISKESTTSARVCDALGDLGWPVAQGAMSTILAVSVLSDVP 2442
IIMSVGFSVDYSAHITYAYVISKESTTSARVCDALGDLGWPVAQGAMSTILAVSVLSDVP
Sbjct: 785 IIMSVGFSVDYSAHITYAYVISKESTTSARVCDALGDLGWPVAQGAMSTILAVSVLSDVP 844
Query: 2443 AYMIVTFFKTVFLAISIGFLHGLVFLPLMLSVFVGCCSSNKIETKSVKEPRFVGRY 2610
AYMIVTFFKTVFLAISIGFLHGLVFLPLMLSVFVGCCSSNKIETKSVKEPRFVGRY
Sbjct: 845 AYMIVTFFKTVFLAISIGFLHGLVFLPLMLSVFVGCCSSNKIETKSVKEPRFVGRY 900
>gi|39598248|emb|CAE68940.1| Hypothetical protein CBG14920
[Caenorhabditis briggsae]
Length = 896
Score = 1511 bits (3911), Expect = 0.0
Identities = 743/836 (88%), Positives = 786/836 (93%)
Frame = +1
Query: 103 SYTERRIIHDAWPLVDGTFVAGRAVTQSREVQVAVVARSGGNILDRVFSNELKLMESFIR 282
S TERRIIHDAWPLVDGTFVAGRAVTQSREVQVAVVAR+ GNIL++VFS+ELK ME+FIR
Sbjct: 65 SKTERRIIHDAWPLVDGTFVAGRAVTQSREVQVAVVARNDGNILEKVFSDELKTMEAFIR 124
Query: 283 NNITVQFSNRTWSFADLCLAGPDGRCANNDHIQLASRLHQHGINITYPTVRLSDKSAYIA 462
NNITV+F+NRTWSF DLCLAGPDGRCANNDHIQL SRL+ HGINITYPTVRL+DKSAYIA
Sbjct: 125 NNITVEFNNRTWSFPDLCLAGPDGRCANNDHIQLVSRLYHHGINITYPTVRLADKSAYIA 184
Query: 463 SALGGVKLAKGDNGENIIVEATAWLLIYQLKFYPNEISYVSGLWEREFKNKMDEYKKQAK 642
SALGGVKLAKG+N ENIIVEA+AWLLIYQLKFYPNE+SY+SGLWE+EFKN+MD YKK++K
Sbjct: 185 SALGGVKLAKGENNENIIVEASAWLLIYQLKFYPNEMSYISGLWEKEFKNQMDSYKKRSK 244
Query: 643 YISITYFHSQTLSDELNRNAERLAPKFIGAFVILVCFSVLCSIVTIKGSGYIDWVVTKPI 822
YISITYFHSQTLSDEL RNAERLAPKFIGAFVILVCFSVLCSIVTIKGSGYIDWVVTKPI
Sbjct: 245 YISITYFHSQTLSDELKRNAERLAPKFIGAFVILVCFSVLCSIVTIKGSGYIDWVVTKPI 304
Query: 823 LSVLGVSNAGMGIASAMGMLTYLEIQYNDIIAVMPFLVVAVGTDNMFLMVASLKRTDRNL 1002
LSVLGVSNAGMGIASAMGMLTY+ IQYNDIIAVMPFLVVAVGTDNMFLMVASLKRTDRNL
Sbjct: 305 LSVLGVSNAGMGIASAMGMLTYMGIQYNDIIAVMPFLVVAVGTDNMFLMVASLKRTDRNL 364
Query: 1003 KYDQRIAECMADAAVSILITALTDALSFGVGTITTIPAVQIFCIYTMCALLLTFAYQLTF 1182
KYDQRIAECMADAAVSILITALTDALSFGVGTITTIPAVQIFCIYTMCALLLTFAYQLTF
Sbjct: 365 KYDQRIAECMADAAVSILITALTDALSFGVGTITTIPAVQIFCIYTMCALLLTFAYQLTF 424
Query: 1183 FCAILVYYTRIEEQGLHSIWLRPAVTYSSTSPLNVKLFWLGSQPQKPLPXXXXXXXXXXX 1362
FCA+LVYYTRIEEQGLHSIWLRPAVTYSSTSPLNVK FWLGSQP K LP
Sbjct: 425 FCAVLVYYTRIEEQGLHSIWLRPAVTYSSTSPLNVKFFWLGSQPPKALPSCGTFNSSTSS 484
Query: 1363 XXXXXXXXXPASKHLHHCAATSFFRNWYAPVLMQPWIRAIAGLWYLIYLGISIYGCTHLK 1542
+SKHLHHC ATSFFRNWYAPVLMQPWIRAIAGLWYLIYL +SIYGC+HLK
Sbjct: 485 TSSIMT----SSKHLHHCTATSFFRNWYAPVLMQPWIRAIAGLWYLIYLALSIYGCSHLK 540
Query: 1543 EGLEPANLLVDDSYATPHYRVLEKHYWHYGASLQIVVSNPPDLRDPVERINMDKMASTFA 1722
EGLEPANLLVDDSYATPHYRVLE+HYWHYGASLQIVV+N PD R+PVERINMDKMASTFA
Sbjct: 541 EGLEPANLLVDDSYATPHYRVLERHYWHYGASLQIVVNNAPDFRNPVERINMDKMASTFA 600
Query: 1723 NCKVAIGDDSVQFWLREMQVSEEIHKIQYDNEKFYDHAAQYIYSDMSQPWVVDVVWGRNN 1902
N KV+IGD+ VQFWLREMQVSE++HKI YD+E+FYD AA+YIYSDMSQPWVVDVVWGRNN
Sbjct: 601 NSKVSIGDEGVQFWLREMQVSEDVHKITYDDERFYDQAAKYIYSDMSQPWVVDVVWGRNN 660
Query: 1903 NSERIIKTFRFMIGMRDISTTTKQTEATNTFREIASRFEQYNVTTYMPLWLFTDQYALVV 2082
SE +IK++RFMIGMRDISTTTKQTEATNTFREIASRFE+YNVTTYMPLWLFTDQYALVV
Sbjct: 661 QSEHVIKSYRFMIGMRDISTTTKQTEATNTFREIASRFERYNVTTYMPLWLFTDQYALVV 720
Query: 2083 PNTMQDIIVAVACMLVISALLIPQPVCSFWVAVTIGSIDLGVLGFMTLWNVNLDAISMIT 2262
PNTMQDI+VAVACMLVISALLIPQPVCSFWVAVTIGSIDLGVLGFMTLW VNLDAISMIT
Sbjct: 721 PNTMQDIVVAVACMLVISALLIPQPVCSFWVAVTIGSIDLGVLGFMTLWGVNLDAISMIT 780
Query: 2263 IIMSVGFSVDYSAHITYAYVISKESTTSARVCDALGDLGWPVAQGAMSTILAVSVLSDVP 2442
IIMSVGFSVDYSAHITYAYVISKE+TT+ARVCDALGDLGWPVAQGAMSTILAVSVLSDVP
Sbjct: 781 IIMSVGFSVDYSAHITYAYVISKETTTTARVCDALGDLGWPVAQGAMSTILAVSVLSDVP 840
Query: 2443 AYMIVTFFKTVFLAISIGFLHGLVFLPLMLSVFVGCCSSNKIETKSVKEPRFVGRY 2610
AYMIVTFFKTVFLAISIGFLHGLVFLPLMLSVFVGCCSS K+E + +KEPRF+ Y
Sbjct: 841 AYMIVTFFKTVFLAISIGFLHGLVFLPLMLSVFVGCCSSKKVEVEPIKEPRFMLTY 896
>gi|17508515|ref|NP_491221.1| PaTched Related (104.4 kD) (ptr-2)
[Caenorhabditis elegans]
gi|7496854|pir||T25600 hypothetical protein C32E8.8 - Caenorhabditis
elegans
gi|1825729|gb|AAB42325.1| Patched related family protein 2
[Caenorhabditis elegans]
Length = 933
Score = 856 bits (2211), Expect = 0.0
Identities = 431/839 (51%), Positives = 583/839 (69%), Gaps = 7/839 (0%)
Frame = +1
Query: 58 VANVVYSLLMIFGPYSYTERRIIHDAWPLVDGTFVAGRAVTQSREVQVAVVARSGGNILD 237
+++ VY L G S ER IH+ WPL D ++ GRAVTQSRE+QV +AR+ NILD
Sbjct: 49 LSDAVY-LFTPLGAQSKMERMSIHEKWPLTDNNYIPGRAVTQSREIQVTALARNDSNILD 107
Query: 238 RVFSNELKLMESFIRNNITVQFSNRTWSFADLCLAGPDGRCANNDHIQLASRLHQHGINI 417
F+N + ++ +I+ + V + +S+ +LCL +G C +N H+ + S LH HG NI
Sbjct: 108 PKFANAVYQLDKYIQTRVRVLHNGHYYSYKNLCLQYKNGGCPSNKHVHILSDLHNHGFNI 167
Query: 418 TYPTVRLSDKSAYIASALGGVKLAKGDNGENIIVEATAWLLIYQLKFYPNEISYVSGLWE 597
TYP R + YI S+LGGV + KG+N +I+ A AW +IY LKF+P E+SY+SG WE
Sbjct: 168 TYPYFRFGSEGGYIGSSLGGVTVMKGENETDILASAKAWFMIYHLKFHPEEMSYISGEWE 227
Query: 598 REFKNKMDEYKKQAKYISITYFHSQTLSDELNRNAERLAPKFIGAFVILVCFSVLCSIVT 777
E + +Y + YISITYFHSQTL+DEL RNA+ L P+FI + +L+ FS LCS+
Sbjct: 228 LELGRMLTQYPEDP-YISITYFHSQTLADELKRNADTLIPRFIISITLLIVFSTLCSLSF 286
Query: 778 IKGSGYIDWVVTKPILSVLGVSNAGMGIASAMGMLTYLEIQYNDIIAVMPFLVVAVGTDN 957
I GS IDWV++KPILS+LGV +AG+ I + +G L+ + + YNDI+ VMPFLV+AVG DN
Sbjct: 287 IDGSFSIDWVLSKPILSILGVVSAGIAILTGVGFLSLMGMPYNDIVGVMPFLVLAVGVDN 346
Query: 958 MFLMVASLKRTDRNLKYDQRIAECMADAAVSILITALTDALSFGVGTITTIPAVQIFCIY 1137
MFLMVA+++RT R +R+ EC+ADAAVSILIT+ TD LSFGVG ITTIPAVQIFC+Y
Sbjct: 347 MFLMVAAVRRTSRTHTVHERMGECLADAAVSILITSSTDVLSFGVGAITTIPAVQIFCVY 406
Query: 1138 TMCALLLTFAYQLTFFCAILVYYTRIEEQGLHSIWLRPAVTYSSTSPLNV--KLFWLGSQ 1311
T A+ F YQ+TFF A L + E G +S++L AV+ + L+ +LF LGS
Sbjct: 407 TGVAIFFAFIYQITFFAACLALAMKHEASGRNSLFLIEAVSAEKKTSLSTFQRLFNLGSV 466
Query: 1312 PQKPLPXXXXXXXXXXXXXXXXXXXXPASKHLHHCAATSFFRNWYAPVLMQPWIRAIAGL 1491
P AS + + FF WYAPVLM P +R IA +
Sbjct: 467 PDHS-----------------------ASHDVKQPLTSRFFGEWYAPVLMHPVVRGIAMV 503
Query: 1492 WYLIYLGISIYGCTHLKEGLEPANLLVDDSYATPHYRVLEKHYWHYGASLQIVVSNPPDL 1671
W++IYL + YGC+ +KEGLEP NLLV+DSYA PHYR+LEK++W YG +QIV++N PDL
Sbjct: 504 WFVIYLLGASYGCSRIKEGLEPVNLLVEDSYAIPHYRLLEKYFWKYGQQVQIVINNAPDL 563
Query: 1672 RDPVERINMDKMASTFANCKVAIGDDSVQFWLREMQ--VSEEIHKIQYDNEKFYDHAAQY 1845
R+ R + M FA K AIG +SVQFWL EM+ +E+ ++Q + FY +
Sbjct: 564 RNHTSRDRVHAMVLDFATSKHAIGMESVQFWLFEMERYYQKEL-EVQIIDSSFYGLLHHF 622
Query: 1846 IYSDMSQPWVVDVVWGR--NNNSERIIKTFRFMIGMRDISTTTKQTEATNTFREIASRFE 2019
+ S + P D+ WG ++++ ++K+FRF++GM+D+ TT QT+AT +FRE+A+R+
Sbjct: 623 LASKTNNPLAEDIYWGPMPDDDNGTMVKSFRFILGMKDLVTTMDQTDATMSFREVAARWP 682
Query: 2020 QYNVTTYMPLWLFTDQYALVVPNTMQDIIVAVACMLVISALLIPQPVCSFWVAVTIGSID 2199
++NVTT+MP+W+FTDQY +++PNT+Q+II+A+ M+VI+ L IPQP+CS WVA+ SID
Sbjct: 683 EFNVTTFMPIWMFTDQYIIIIPNTVQNIIIALLVMIVIAVLFIPQPMCSLWVALACASID 742
Query: 2200 LGVLGFMTLWNVNLDAISMITIIMSVGFSVDYSAHITYAYVISKESTTSARVCDALGDLG 2379
GV+G+MTLW VNLDAISMITIIMS+GFSVDYSAHI Y YV+S+E T + RV +AL LG
Sbjct: 743 FGVIGYMTLWGVNLDAISMITIIMSIGFSVDYSAHIAYGYVVSREDTAAGRVKEALSALG 802
Query: 2380 WPVAQGAMSTILAVSVLSDVPAYMIVTFFKTVFLAISIGFLHGLVFLPLMLSVFV-GCC 2553
WP++QGAMSTI+AVSVL+D+PAYMIVTFFKTV L+IS+G LHGLVFLP++LS+FV GCC
Sbjct: 803 WPLSQGAMSTIIAVSVLADIPAYMIVTFFKTVVLSISLGLLHGLVFLPVLLSIFVRGCC 861
>gi|39586255|emb|CAE66666.1| Hypothetical protein CBG12004
[Caenorhabditis briggsae]
Length = 933
Score = 853 bits (2204), Expect = 0.0
Identities = 428/839 (51%), Positives = 581/839 (69%), Gaps = 7/839 (0%)
Frame = +1
Query: 58 VANVVYSLLMIFGPYSYTERRIIHDAWPLVDGTFVAGRAVTQSREVQVAVVARSGGNILD 237
+++ VY L G S ER IH+ WPL D ++ GRAVTQSRE+QV +AR+ NILD
Sbjct: 49 LSDAVY-LFTPIGAQSKMERMSIHEKWPLTDNNYIPGRAVTQSREIQVTALARNDSNILD 107
Query: 238 RVFSNELKLMESFIRNNITVQFSNRTWSFADLCLAGPDGRCANNDHIQLASRLHQHGINI 417
F+N + ++ +I+ + V + +S+ +LCL +G C +N H+ + S L+ HG NI
Sbjct: 108 TKFANAVYQLDKYIQTRVRVLHNGHYYSYKNLCLQYKNGGCPSNKHVHILSDLYNHGFNI 167
Query: 418 TYPTVRLSDKSAYIASALGGVKLAKGDNGENIIVEATAWLLIYQLKFYPNEISYVSGLWE 597
TYP R + YI S+LGGV + KG+N +I+ A AW +IY LKF+P E+SY+SG WE
Sbjct: 168 TYPYFRFGSEGGYIGSSLGGVTVMKGENETDILASAKAWFMIYHLKFHPEEMSYISGEWE 227
Query: 598 REFKNKMDEYKKQAKYISITYFHSQTLSDELNRNAERLAPKFIGAFVILVCFSVLCSIVT 777
E + +Y + YISITYFHSQTL+DEL RNA+ L P+F+ +F +LV FS LCS+
Sbjct: 228 LELGRMLKDYPEDP-YISITYFHSQTLADELKRNADTLVPRFVISFTLLVVFSTLCSLCF 286
Query: 778 IKGSGYIDWVVTKPILSVLGVSNAGMGIASAMGMLTYLEIQYNDIIAVMPFLVVAVGTDN 957
I GS IDWV++KPILS+LGV NAG+ I + +G L+ + + YNDI+ VMPFLVVAVGTDN
Sbjct: 287 IDGSFSIDWVLSKPILSILGVVNAGIAILTGIGCLSLIGMPYNDIVGVMPFLVVAVGTDN 346
Query: 958 MFLMVASLKRTDRNLKYDQRIAECMADAAVSILITALTDALSFGVGTITTIPAVQIFCIY 1137
MFLMVA+++RT R +R+ ECMADAAVSILIT+ TD LSFGVGTITTIPAVQIFC+Y
Sbjct: 347 MFLMVAAVRRTSRTHTVHERMGECMADAAVSILITSSTDVLSFGVGTITTIPAVQIFCVY 406
Query: 1138 TMCALLLTFAYQLTFFCAILVYYTRIEEQGLHSIWLRPAVTYSSTSPLNV--KLFWLGSQ 1311
T A+ F YQ+TFF A L + E G +S++ +V L+ ++F +GS
Sbjct: 407 TGVAIFFAFLYQITFFAACLALAMKHEAAGRNSMFFVESVPAEKRKSLSTFQRIFNMGSV 466
Query: 1312 PQKPLPXXXXXXXXXXXXXXXXXXXXPASKHLHHCAATSFFRNWYAPVLMQPWIRAIAGL 1491
P +S + + FF WYAPVLM P++R IA +
Sbjct: 467 PDHS-----------------------SSNDVKQPLTSRFFGEWYAPVLMNPFVRGIAMV 503
Query: 1492 WYLIYLGISIYGCTHLKEGLEPANLLVDDSYATPHYRVLEKHYWHYGASLQIVVSNPPDL 1671
W++IYL + YGC+ +KEGLEP NLLV+DSYA PHYR+LEK++W YG +QIV++N PDL
Sbjct: 504 WFVIYLLGASYGCSRIKEGLEPVNLLVEDSYAIPHYRLLEKYFWKYGQQVQIVINNAPDL 563
Query: 1672 RDPVERINMDKMASTFANCKVAIGDDSVQFWLREMQ--VSEEIHKIQYDNEKFYDHAAQY 1845
R+ R + M FA K AIG +SVQFWL EM+ +E+ ++Q + FY +
Sbjct: 564 RNHTSRDRVHAMVLDFATSKHAIGMESVQFWLFEMERYYQKEL-QVQIIDSSFYGLLQHF 622
Query: 1846 IYSDMSQPWVVDVVWGR--NNNSERIIKTFRFMIGMRDISTTTKQTEATNTFREIASRFE 2019
+ S + P D+ WG ++++ ++++FRF++GM+D+ TT QT+AT +FR++A+R+
Sbjct: 623 LASKTNNPLAEDIYWGPMPDDDNGTMVQSFRFIVGMKDLVTTMDQTDATMSFRDVAARWP 682
Query: 2020 QYNVTTYMPLWLFTDQYALVVPNTMQDIIVAVACMLVISALLIPQPVCSFWVAVTIGSID 2199
++NVTT+MP+W+FTDQY +++PNT+Q+II+A+ M+VI+ L IPQP+CS WVA+ SID
Sbjct: 683 EFNVTTFMPIWMFTDQYIIIIPNTVQNIIIALLVMIVIAVLFIPQPMCSLWVALACASID 742
Query: 2200 LGVLGFMTLWNVNLDAISMITIIMSVGFSVDYSAHITYAYVISKESTTSARVCDALGDLG 2379
GV+G+MTLW VNLDAISMITIIMS+GFSVDYSAHI Y YV+S T + RV +AL LG
Sbjct: 743 FGVIGYMTLWGVNLDAISMITIIMSIGFSVDYSAHIAYGYVVSTRDTATGRVQEALSALG 802
Query: 2380 WPVAQGAMSTILAVSVLSDVPAYMIVTFFKTVFLAISIGFLHGLVFLPLMLSVFV-GCC 2553
WP+ QGAMSTI+AVSVL+D+PAYMIVTFFKTV L+IS+G LHGLVFLP++LS+FV GCC
Sbjct: 803 WPLFQGAMSTIIAVSVLADIPAYMIVTFFKTVVLSISLGLLHGLVFLPVLLSIFVRGCC 861