Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= F56A3_6
(2352 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17507663|ref|NP_491543.1| putative protein (1F759) [Caenorhab... 1454 0.0
gi|7504362|pir||T29148 hypothetical protein F56A3.1 - Caenorhabd... 1190 0.0
gi|39595862|emb|CAE67365.1| Hypothetical protein CBG12832 [Caeno... 1001 0.0
gi|24648759|ref|NP_650971.1| CG7922-PA [Drosophila melanogaster]... 40 0.19
gi|26554034|ref|NP_757968.1| adenylosuccinate lyase [Mycoplasma ... 40 0.19
gi|48106961|ref|XP_396173.1| similar to CG7922-PA [Apis mellifera] 39 0.74
gi|31204041|ref|XP_310969.1| ENSANGP00000019476 [Anopheles gambi... 38 0.96
gi|8778360|gb|AAF79368.1| F15O4.40 [Arabidopsis thaliana] 38 1.3
gi|46308165|ref|ZP_00210360.1| COG0466: ATP-dependent Lon protea... 37 1.6
gi|47230040|emb|CAG10454.1| unnamed protein product [Tetraodon n... 37 2.8
gi|15219634|ref|NP_174785.1| DEAD/DEAH box helicase, putative [A... 37 2.8
gi|23273574|gb|AAH36056.1| KIAA1596 protein [Homo sapiens] 35 6.2
gi|21752288|dbj|BAC04159.1| unnamed protein product [Homo sapiens] 35 6.2
gi|28899456|ref|NP_799061.1| RNA polymerase-associated protein H... 35 6.2
gi|37545933|ref|XP_048128.5| KIAA1596 [Homo sapiens] 35 6.2
gi|26341032|dbj|BAC34178.1| unnamed protein product [Mus musculu... 35 6.2
gi|34865292|ref|XP_234239.2| similar to RIKEN cDNA C730036B14 ge... 35 6.2
gi|47566164|ref|ZP_00237192.1| hypothetical protein protein [Bac... 35 6.2
gi|38050374|ref|XP_126996.3| RIKEN cDNA C730036B14 gene [Mus mus... 35 6.2
gi|26333531|dbj|BAC30483.1| unnamed protein product [Mus musculus] 35 6.2
gi|26352047|dbj|BAC39660.1| unnamed protein product [Mus musculus] 35 6.2
gi|11281977|pir||T43934 DNA-directed DNA polymerase (EC 2.7.7.7)... 35 8.1
gi|20141412|sp|P81409|DP2L_PYRFU DNA polymerase II large subunit... 35 8.1
gi|14520338|ref|NP_125813.1| dna polymerase ii large subunit [Py... 35 8.1
gi|14590066|ref|NP_142130.1| hypothetical protein PH0121 [Pyroco... 35 8.1
gi|33359447|ref|NP_577748.2| DNA polymerase II subunit 2 [Pyroco... 35 8.1
gi|13431451|sp|O57861|DP2L_PYRHO DNA polymerase II large subunit... 35 8.1
>gi|17507663|ref|NP_491543.1| putative protein (1F759) [Caenorhabditis
elegans]
gi|14916319|gb|AAB37805.2| Hypothetical protein F56A3.1
[Caenorhabditis elegans]
Length = 783
Score = 1454 bits (3763), Expect = 0.0
Identities = 726/783 (92%), Positives = 726/783 (92%)
Frame = +1
Query: 1 MPPKKTQKSGLLQFFAKQQQEKYQNSSKNEETTEHDDSCQILFEKQVAGPSKVSKPIGFP 180
MPPKKTQKSGLLQFFAKQQQEKYQNSSKNEETTEHDDSCQILFEKQVAGPSKVSKPIGFP
Sbjct: 1 MPPKKTQKSGLLQFFAKQQQEKYQNSSKNEETTEHDDSCQILFEKQVAGPSKVSKPIGFP 60
Query: 181 TTPKNTTKWAETLQKSSEKAGRDWLNPFPIRVSSAKKEIEKNSKTELLAKGFDDIHGNGI 360
TTPKNTTKWAETLQKSSEKAGRDWLNPFPIRVSSAKKEIEKNSKTELLAKGFDDIHGNGI
Sbjct: 61 TTPKNTTKWAETLQKSSEKAGRDWLNPFPIRVSSAKKEIEKNSKTELLAKGFDDIHGNGI 120
Query: 361 FYPINEPIRNFEXXXXXXXXXXXXXVALPSSSPSTPGRICAMTVFNFLKWFPRCRVXXXX 540
FYPINEPIRNFE VALPSSSPSTPGRICAMTVFNFLKWFPRCRV
Sbjct: 121 FYPINEPIRNFELNLLKCLSSSNCCVALPSSSPSTPGRICAMTVFNFLKWFPRCRVLLVS 180
Query: 541 XXXXXXXXXXXXGLESQTTKLTTVTQFKNLKTEAGKILVCTTPQCALKVVESTGGREFLE 720
GLESQTTKLTTVTQFKNLKTEAGKILVCTTPQCALKVVESTGGREFLE
Sbjct: 181 SSDSWISSLRQLGLESQTTKLTTVTQFKNLKTEAGKILVCTTPQCALKVVESTGGREFLE 240
Query: 721 EIRLVLMELKPNECCSKYKPILNALTVKETFFRCSVLXXXXXXXXXXXXXITKRQQMITN 900
EIRLVLMELKPNECCSKYKPILNALTVKETFFRCSVL ITKRQQMITN
Sbjct: 241 EIRLVLMELKPNECCSKYKPILNALTVKETFFRCSVLTTSTSNASRRTASITKRQQMITN 300
Query: 901 LQLSDWIEQTEADFAFRSANIPAGVEVKTWKSEDNSAKHAEITGKFEKYCEKTIDDLARQ 1080
LQLSDWIEQTEADFAFRSANIPAGVEVKTWKSEDNSAKHAEITGKFEKYCEKTIDDLARQ
Sbjct: 301 LQLSDWIEQTEADFAFRSANIPAGVEVKTWKSEDNSAKHAEITGKFEKYCEKTIDDLARQ 360
Query: 1081 CIVSSKSVKKLIWTCWKTLKQQXXXXXXXXXXXXXXXFLTCTYKLLIIDGVVAARNFVKK 1260
CIVSSKSVKKLIWTCWKTLKQQ FLTCTYKLLIIDGVVAARNFVKK
Sbjct: 361 CIVSSKSVKKLIWTCWKTLKQQSKLPEIEKKKLEISEFLTCTYKLLIIDGVVAARNFVKK 420
Query: 1261 HSEIPHIKEHAEKILEPTIFGGFSEFPAKFQQLSDSIEAFLKMDNHVLGVILCRDSDQAI 1440
HSEIPHIKEHAEKILEPTIFGGFSEFPAKFQQLSDSIEAFLKMDNHVLGVILCRDSDQAI
Sbjct: 421 HSEIPHIKEHAEKILEPTIFGGFSEFPAKFQQLSDSIEAFLKMDNHVLGVILCRDSDQAI 480
Query: 1441 EIQNYLELQLTTRCTCVRIIEEGTHPGRNLWNIQRISTVFIDRKSPKIVILPVKIRDFIG 1620
EIQNYLELQLTTRCTCVRIIEEGTHPGRNLWNIQRISTVFIDRKSPKIVILPVKIRDFIG
Sbjct: 481 EIQNYLELQLTTRCTCVRIIEEGTHPGRNLWNIQRISTVFIDRKSPKIVILPVKIRDFIG 540
Query: 1621 FSDGLPLSELTFIASISRDSLFNFRRFGGAHLLIINDPLEKLRNEDGRLLVDDGKFVQNN 1800
FSDGLPLSELTFIASISRDSLFNFRRFGGAHLLIINDPLEKLRNEDGRLLVDDGKFVQNN
Sbjct: 541 FSDGLPLSELTFIASISRDSLFNFRRFGGAHLLIINDPLEKLRNEDGRLLVDDGKFVQNN 600
Query: 1801 SKNAPKMGAVERYDFKFEPSRLRIDATHLPIQFFYPRDVGVTFDETAGISQLGKTHIEMT 1980
SKNAPKMGAVERYDFKFEPSRLRIDATHLPIQFFYPRDVGVTFDETAGISQLGKTHIEMT
Sbjct: 601 SKNAPKMGAVERYDFKFEPSRLRIDATHLPIQFFYPRDVGVTFDETAGISQLGKTHIEMT 660
Query: 1981 SKEHTELFKRLQNPDFSRFQRRKRVFWVLEDLEHPNENKSIPIEEMDETQLCWNQDIQYL 2160
SKEHTELFKRLQNPDFSRFQRRKRVFWVLEDLEHPNENKSIPIEEMDETQLCWNQDIQYL
Sbjct: 661 SKEHTELFKRLQNPDFSRFQRRKRVFWVLEDLEHPNENKSIPIEEMDETQLCWNQDIQYL 720
Query: 2161 GEIKSSKLSERLTRYMKDEPVEWIINEKRRFEYINEITSTDRLVHLDRLLRNLDAHFQVL 2340
GEIKSSKLSERLTRYMKDEPVEWIINEKRRFEYINEITSTDRLVHLDRLLRNLDAHFQVL
Sbjct: 721 GEIKSSKLSERLTRYMKDEPVEWIINEKRRFEYINEITSTDRLVHLDRLLRNLDAHFQVL 780
Query: 2341 SSC 2349
SSC
Sbjct: 781 SSC 783
>gi|7504362|pir||T29148 hypothetical protein F56A3.1 - Caenorhabditis
elegans
Length = 687
Score = 1190 bits (3079), Expect(2) = 0.0
Identities = 597/654 (91%), Positives = 597/654 (91%)
Frame = +1
Query: 1 MPPKKTQKSGLLQFFAKQQQEKYQNSSKNEETTEHDDSCQILFEKQVAGPSKVSKPIGFP 180
MPPKKTQKSGLLQFFAKQQQEKYQNSSKNEETTEHDDSCQILFEKQVAGPSKVSKPIGFP
Sbjct: 1 MPPKKTQKSGLLQFFAKQQQEKYQNSSKNEETTEHDDSCQILFEKQVAGPSKVSKPIGFP 60
Query: 181 TTPKNTTKWAETLQKSSEKAGRDWLNPFPIRVSSAKKEIEKNSKTELLAKGFDDIHGNGI 360
TTPKNTTKWAETLQKSSEKAGRDWLNPFPIRVSSAKKEIEKNSKTELLAKGFDDIHGNGI
Sbjct: 61 TTPKNTTKWAETLQKSSEKAGRDWLNPFPIRVSSAKKEIEKNSKTELLAKGFDDIHGNGI 120
Query: 361 FYPINEPIRNFEXXXXXXXXXXXXXVALPSSSPSTPGRICAMTVFNFLKWFPRCRVXXXX 540
FYPINEPIRNFE VALPSSSPSTPGRICAMTVFNFLKWFPRCRV
Sbjct: 121 FYPINEPIRNFELNLLKCLSSSNCCVALPSSSPSTPGRICAMTVFNFLKWFPRCRVLLVS 180
Query: 541 XXXXXXXXXXXXGLESQTTKLTTVTQFKNLKTEAGKILVCTTPQCALKVVESTGGREFLE 720
GLESQTTKLTTVTQFKNLKTEAGKILVCTTPQCALKVVESTGGREFLE
Sbjct: 181 SSDSWISSLRQLGLESQTTKLTTVTQFKNLKTEAGKILVCTTPQCALKVVESTGGREFLE 240
Query: 721 EIRLVLMELKPNECCSKYKPILNALTVKETFFRCSVLXXXXXXXXXXXXXITKRQQMITN 900
EIRLVLMELKPNECCSKYKPILNALTVKETFFRCSVL ITKRQQMITN
Sbjct: 241 EIRLVLMELKPNECCSKYKPILNALTVKETFFRCSVLTTSTSNASRRTASITKRQQMITN 300
Query: 901 LQLSDWIEQTEADFAFRSANIPAGVEVKTWKSEDNSAKHAEITGKFEKYCEKTIDDLARQ 1080
LQLSDWIEQTEADFAFRSANIPAGVEVKTWKSEDNSAKHAEITGKFEKYCEKTIDDLARQ
Sbjct: 301 LQLSDWIEQTEADFAFRSANIPAGVEVKTWKSEDNSAKHAEITGKFEKYCEKTIDDLARQ 360
Query: 1081 CIVSSKSVKKLIWTCWKTLKQQXXXXXXXXXXXXXXXFLTCTYKLLIIDGVVAARNFVKK 1260
CIVSSKSVKKLIWTCWKTLKQQ FLTCTYKLLIIDGVVAARNFVKK
Sbjct: 361 CIVSSKSVKKLIWTCWKTLKQQSKLPEIEKKKLEISEFLTCTYKLLIIDGVVAARNFVKK 420
Query: 1261 HSEIPHIKEHAEKILEPTIFGGFSEFPAKFQQLSDSIEAFLKMDNHVLGVILCRDSDQAI 1440
HSEIPHIKEHAEKILEPTIFGGFSEFPAKFQQLSDSIEAFLKMDNHVLGVILCRDSDQAI
Sbjct: 421 HSEIPHIKEHAEKILEPTIFGGFSEFPAKFQQLSDSIEAFLKMDNHVLGVILCRDSDQAI 480
Query: 1441 EIQNYLELQLTTRCTCVRIIEEGTHPGRNLWNIQRISTVFIDRKSPKIVILPVKIRDFIG 1620
EIQNYLELQLTTRCTCVRIIEEGTHPGRNLWNIQRISTVFIDRKSPKIVILPVKIRDFIG
Sbjct: 481 EIQNYLELQLTTRCTCVRIIEEGTHPGRNLWNIQRISTVFIDRKSPKIVILPVKIRDFIG 540
Query: 1621 FSDGLPLSELTFIASISRDSLFNFRRFGGAHLLIINDPLEKLRNEDGRLLVDDGKFVQNN 1800
FSDGLPLSELTFIASISRDSLFNFRRFGGAHLLIINDPLEKLRNEDGRLLVDDGKFVQNN
Sbjct: 541 FSDGLPLSELTFIASISRDSLFNFRRFGGAHLLIINDPLEKLRNEDGRLLVDDGKFVQNN 600
Query: 1801 SKNAPKMGAVERYDFKFEPSRLRIDATHLPIQFFYPRDVGVTFDETAGISQLGK 1962
SKNAPKMGAVERYDFKFEPSRLRIDATHLPIQFFYPRDVGVTFDETAGISQLGK
Sbjct: 601 SKNAPKMGAVERYDFKFEPSRLRIDATHLPIQFFYPRDVGVTFDETAGISQLGK 654
Score = 73.9 bits (180), Expect(2) = 0.0
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +2
Query: 2069 KIWSTQMKINQFQLKKWMKLNFAGIRIFNIWVK 2167
KIWSTQMKINQFQLKKWMKLNFAGIRIFNIWVK
Sbjct: 655 KIWSTQMKINQFQLKKWMKLNFAGIRIFNIWVK 687
>gi|39595862|emb|CAE67365.1| Hypothetical protein CBG12832
[Caenorhabditis briggsae]
Length = 746
Score = 1001 bits (2589), Expect = 0.0
Identities = 501/782 (64%), Positives = 598/782 (76%), Gaps = 1/782 (0%)
Frame = +1
Query: 1 MPPKKTQKSGLLQFFAKQQQEKYQNSSKNEETTEHDDSCQILFEKQVAGPSKVSKPIGFP 180
MPPKKT K GLLQFFAKQQQEKYQN++++ + D+SCQILFEK V S V+
Sbjct: 1 MPPKKTPKPGLLQFFAKQQQEKYQNNARSSDNQLDDESCQILFEKPVPSTSSVN------ 54
Query: 181 TTPKNTTKWAETLQKSSEKA-GRDWLNPFPIRVSSAKKEIEKNSKTELLAKGFDDIHGNG 357
TTPK+ TKW+ TLQKS+EK GRDW +PFPI+V SAKK SK++LLA GFD IHGNG
Sbjct: 55 TTPKSATKWSTTLQKSAEKRMGRDWQHPFPIKVGSAKKANGNASKSDLLANGFDGIHGNG 114
Query: 358 IFYPINEPIRNFEXXXXXXXXXXXXXVALPSSSPSTPGRICAMTVFNFLKWFPRCRVXXX 537
IFYPI+EPIRNFE +ALP+S+ S+ GRICAMTVFNFLKWFPRCR+
Sbjct: 115 IFYPIDEPIRNFELNLLKCTATSNCCIALPASASSSSGRICAMTVFNFLKWFPRCRILLV 174
Query: 538 XXXXXXXXXXXXXGLESQTTKLTTVTQFKNLKTEAGKILVCTTPQCALKVVESTGGREFL 717
GLESQTTK TT+TQFKN+K E+G+I++C TPQCALK++ES+ EFL
Sbjct: 175 TASDSWLTSLRQLGLESQTTKFTTMTQFKNMKKESGRIMMCATPQCALKILESSESLEFL 234
Query: 718 EEIRLVLMELKPNECCSKYKPILNALTVKETFFRCSVLXXXXXXXXXXXXXITKRQQMIT 897
+EIRLV+MELKP+ECCSKYKPI+NALTVK+ FFRC VL ITKRQ MIT
Sbjct: 235 DEIRLVIMELKPSECCSKYKPIINALTVKDVFFRCVVLTTATSNTSRRTASITKRQIMIT 294
Query: 898 NLQLSDWIEQTEADFAFRSANIPAGVEVKTWKSEDNSAKHAEITGKFEKYCEKTIDDLAR 1077
NL LSDWIEQ+E DF+FR++NIPAGVEVKTWK E+NS K EI KFE +CEK ID+LAR
Sbjct: 295 NLHLSDWIEQSETDFSFRNSNIPAGVEVKTWKIEENSMKLQEIIEKFESFCEKPIDELAR 354
Query: 1078 QCIVSSKSVKKLIWTCWKTLKQQXXXXXXXXXXXXXXXFLTCTYKLLIIDGVVAARNFVK 1257
I+ SKS+KK+I+TCWK++KQ FL YK L+IDGVVA+RN+VK
Sbjct: 355 LSILPSKSMKKMIFTCWKSMKQ---SNTQEIDKLETAEFLITAYKTLLIDGVVASRNYVK 411
Query: 1258 KHSEIPHIKEHAEKILEPTIFGGFSEFPAKFQQLSDSIEAFLKMDNHVLGVILCRDSDQA 1437
K +E ++E A+KIL+P+I GGFSEFP+KFQ LS+SIEAFLKM+NHVLGVILCRDSDQ
Sbjct: 412 KEAENTKLQELAKKILDPSILGGFSEFPSKFQHLSNSIEAFLKMNNHVLGVILCRDSDQG 471
Query: 1438 IEIQNYLELQLTTRCTCVRIIEEGTHPGRNLWNIQRISTVFIDRKSPKIVILPVKIRDFI 1617
IEIQNYL+LQL TRCT +RIIEEGTHP RNLWNIQRISTVF+DRK+PKIVILPVK+RDFI
Sbjct: 472 IEIQNYLDLQLATRCTVLRIIEEGTHPARNLWNIQRISTVFLDRKAPKIVILPVKLRDFI 531
Query: 1618 GFSDGLPLSELTFIASISRDSLFNFRRFGGAHLLIINDPLEKLRNEDGRLLVDDGKFVQN 1797
G SDGLPLSE+TFIAS+SRD FNFRRFGGA+LL+ NDPLE L
Sbjct: 532 GHSDGLPLSEVTFIASVSRDCTFNFRRFGGAYLLLANDPLEML----------------- 574
Query: 1798 NSKNAPKMGAVERYDFKFEPSRLRIDATHLPIQFFYPRDVGVTFDETAGISQLGKTHIEM 1977
FKFEPSRLRID HLP+ FFYPR++G + DETAG+S+LGKTHIEM
Sbjct: 575 -------------IRFKFEPSRLRIDVAHLPMHFFYPREMGDSLDETAGMSRLGKTHIEM 621
Query: 1978 TSKEHTELFKRLQNPDFSRFQRRKRVFWVLEDLEHPNENKSIPIEEMDETQLCWNQDIQY 2157
+ KEH EL+KRLQNPDFS FQRRKR FW+L+DLE+PNE +SI ++EMD+ Q+ WNQ++QY
Sbjct: 622 SLKEHAELYKRLQNPDFSSFQRRKRPFWILKDLENPNEKRSIEVDEMDDDQVNWNQNLQY 681
Query: 2158 LGEIKSSKLSERLTRYMKDEPVEWIINEKRRFEYINEITSTDRLVHLDRLLRNLDAHFQV 2337
LG+I+ SKLSER T+Y+K+ VEW I+EKRRFEY+N+ITS DRL+HLDRLLRNLDA+F+V
Sbjct: 682 LGDIRWSKLSERFTKYLKNGHVEWAISEKRRFEYVNDITSPDRLLHLDRLLRNLDANFEV 741
Query: 2338 LS 2343
LS
Sbjct: 742 LS 743