Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= F56D12_7
         (999 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17534451|ref|NP_493951.1| JNK Interacting Protein (scaffold p...   534   e-150
gi|50727048|gb|AAB66117.4| Jnk interacting protein (scaffold pro...   317   4e-85
gi|45190677|ref|NP_984931.1| AER071Wp [Eremothecium gossypii] >g...    36   1.6
gi|28207555|gb|AAO32146.1| NAD-linked formate dehydrogenase alph...    35   2.1
gi|20975764|gb|AAM33144.1| orthodenticle [Patella vulgata]             35   2.7
gi|4504727|ref|NP_002191.1| interferon regulatory factor 5 isofo...    34   6.0


>gi|17534451|ref|NP_493951.1| JNK Interacting Protein (scaffold
           protein) (jip-1) [Caenorhabditis elegans]
 gi|25375354|pir||B88042 protein F56D12.3 [imported] -
           Caenorhabditis elegans
          Length = 332

 Score =  534 bits (1376), Expect = e-150
 Identities = 268/332 (80%), Positives = 268/332 (80%)
 Frame = +1

Query: 1   MERGSLVCLGSAHNCRNVIGGGGGHVEELQLPKNHHRLHPEILDNGVHANGIQSQYGSFS 180
           MERGSLVCLGSAHNCRNVIGGGGGHVEELQLPKNHHRLHPEILDNGVHANGIQSQYGSFS
Sbjct: 1   MERGSLVCLGSAHNCRNVIGGGGGHVEELQLPKNHHRLHPEILDNGVHANGIQSQYGSFS 60

Query: 181 SLAQNEPTSSLMRRSCTTDEFHXXXXXXXXXXDELGEPIDLLPQSKSMYERALQFGYATS 360
           SLAQNEPTSSLMRRSCTTDEFH          DELGEPIDLLPQSKSMYERALQFGYATS
Sbjct: 61  SLAQNEPTSSLMRRSCTTDEFHRVRRRLPRRPDELGEPIDLLPQSKSMYERALQFGYATS 120

Query: 361 STSPPEDYTSKEMKKRPPNLALQTTIDTIRWVPYLGKYNILKVFTLKFGFSIVFYSSYQQ 540
           STSPPEDYTSKEMKKRPPNLALQTTIDTIRWVPYLGKYNILKVFTLKFGFSIVFYSSYQQ
Sbjct: 121 STSPPEDYTSKEMKKRPPNLALQTTIDTIRWVPYLGKYNILKVFTLKFGFSIVFYSSYQQ 180

Query: 541 SSGMETRXXXXXXXXXXXXXXXXXXKIDPCAHLETPISPHIQXXXXXXXXXXXXXXXVKF 720
           SSGMETR                  KIDPCAHLETPISPHIQ               VKF
Sbjct: 181 SSGMETRTINSTTGTNGIGSAGAAGKIDPCAHLETPISPHIQNSNFSLFSTLSCFSFVKF 240

Query: 721 LAQFLPFWGTVAPKIRKHCAPPYAKMHRILKLSEKAVLVVKNDDMELAEXXXXXXXXXXX 900
           LAQFLPFWGTVAPKIRKHCAPPYAKMHRILKLSEKAVLVVKNDDMELAE
Sbjct: 241 LAQFLPFWGTVAPKIRKHCAPPYAKMHRILKLSEKAVLVVKNDDMELAEFAVKFVKKKFL 300

Query: 901 XXXXXXXXXXVIPCAIEFDLMKMRSSFGGWEI 996
                     VIPCAIEFDLMKMRSSFGGWEI
Sbjct: 301 SKIFLKFFHFVIPCAIEFDLMKMRSSFGGWEI 332




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