Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= F56G4_3
         (996 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17507699|ref|NP_492909.1| patterned Expression Site PES-2, Ve...   675   0.0
gi|39582980|emb|CAE73045.1| Hypothetical protein CBG20415 [Caeno...   142   1e-32
gi|39579979|emb|CAE56223.1| Hypothetical protein CBG23855 [Caeno...    52   2e-05
gi|49035165|gb|AAK68353.2| Hypothetical protein F29G9.7 [Caenorh...    49   2e-04
gi|17560370|ref|NP_504562.1| predicted CDS, putative cytoplasmic...    49   2e-04
gi|17564210|ref|NP_507029.1| putative protein family member (5Q5...    49   2e-04
gi|7500177|pir||T31804 hypothetical protein F29G9.7 - Caenorhabd...    49   2e-04
gi|17559384|ref|NP_504434.1| cyclin-like F-box family member (5F...    48   3e-04
gi|39592443|emb|CAE63520.1| Hypothetical protein CBG07999 [Caeno...    47   5e-04
gi|39582399|emb|CAE74783.1| Hypothetical protein CBG22614 [Caeno...    47   5e-04
gi|17558298|ref|NP_505764.1| predicted CDS, putative cytoplasmic...    47   9e-04
gi|39592439|emb|CAE63516.1| Hypothetical protein CBG07995 [Caeno...    47   9e-04
gi|7507212|pir||T24545 hypothetical protein T05F1.11 - Caenorhab...    43   0.010
gi|32565425|ref|NP_871891.1| cyclin-like F-box family member (1K...    43   0.010
gi|48858312|ref|ZP_00312270.1| COG4753: Response regulator conta...    41   0.049
gi|39585960|emb|CAE68249.1| Hypothetical protein CBG13925 [Caeno...    40   0.064
gi|39588295|emb|CAE72646.1| Hypothetical protein CBG19852 [Caeno...    40   0.083
gi|39597878|emb|CAE68570.1| Hypothetical protein CBG14412 [Caeno...    40   0.083
gi|39597434|emb|CAE59664.1| Hypothetical protein CBG03083 [Caeno...    39   0.14
gi|39582431|emb|CAE74815.1| Hypothetical protein CBG22651 [Caeno...    39   0.14
gi|39582822|emb|CAE74285.1| Hypothetical protein CBG21983 [Caeno...    39   0.18
gi|39588216|emb|CAE68141.1| Hypothetical protein CBG13792 [Caeno...    39   0.18
gi|39583709|emb|CAE63813.1| Hypothetical protein CBG08363 [Caeno...    39   0.18
gi|39580195|emb|CAE71702.1| Hypothetical protein CBG18679 [Caeno...    39   0.24
gi|6226217|sp|O77448|TERT_TETTH TELOMERASE REVERSE TRANSCRIPTASE...    38   0.32
gi|17533665|ref|NP_494331.1| cyclin-like F-box (2C970) [Caenorha...    37   0.54
gi|17552704|ref|NP_497698.1| cyclin-like F-box family member (3E...    37   0.54
gi|39579570|emb|CAE56302.1| Hypothetical protein CBG23959 [Caeno...    37   0.54
gi|7500438|pir||T32345 hypothetical protein F34D6.1 - Caenorhabd...    37   0.54
gi|39579651|emb|CAE74742.1| Hypothetical protein CBG22564 [Caeno...    37   0.70
gi|17554928|ref|NP_499803.1| putative protein family member (3O6...    37   0.92
gi|23509495|ref|NP_702162.1| hypothetical protein [Plasmodium fa...    37   0.92
gi|39588199|emb|CAE68124.1| Hypothetical protein CBG13769 [Caeno...    37   0.92
gi|39592441|emb|CAE63518.1| Hypothetical protein CBG07997 [Caeno...    36   1.2
gi|39588099|emb|CAE57331.1| Hypothetical protein CBG00258 [Caeno...    36   1.2
gi|17553776|ref|NP_498994.1| cyclin-like F-box family member (3K...    35   2.7
gi|23508753|ref|NP_701421.1| hypothetical protein [Plasmodium fa...    35   3.5
gi|39588220|emb|CAE68145.1| Hypothetical protein CBG13797 [Caeno...    34   4.6
gi|39583665|emb|CAE63769.1| Hypothetical protein CBG08306 [Caeno...    34   5.9
gi|39592435|emb|CAE63512.1| Hypothetical protein CBG07991 [Caeno...    34   5.9
gi|39587175|emb|CAE57643.1| Hypothetical protein CBG00629 [Caeno...    34   5.9
gi|39588213|emb|CAE68138.1| Hypothetical protein CBG13789 [Caeno...    33   7.8
gi|39592437|emb|CAE63514.1| Hypothetical protein CBG07993 [Caeno...    33   7.8
gi|23619224|ref|NP_705186.1| hypothetical protein [Plasmodium fa...    33   7.8
gi|42784368|ref|NP_981615.1| hypothetical protein BCE5323 [Bacil...    33   7.8
gi|50293891|ref|XP_449357.1| unnamed protein product [Candida gl...    33   7.8


>gi|17507699|ref|NP_492909.1| patterned Expression Site PES-2, Very
           Early Transcript VET-4, putative protein (38.2 kD)
           (pes-2.1) [Caenorhabditis elegans]
 gi|17507701|ref|NP_492910.1| patterned Expression Site PES-2, Very
           Early Transcript VET-4, one of two identical pes-2
           genes, organised as a palindrome (38.2 kD) (pes-2.2)
           [Caenorhabditis elegans]
 gi|7504449|pir||T22783 hypothetical protein F56G4.2 -
           Caenorhabditis elegans
 gi|1154639|emb|CAA64362.1| pes-2 [Caenorhabditis elegans]
 gi|1154641|emb|CAA64363.1| pes-2 [Caenorhabditis elegans]
 gi|3877756|emb|CAB04484.1| Hypothetical protein F56G4.2
           [Caenorhabditis elegans]
 gi|3877757|emb|CAB04485.1| Hypothetical protein F56G4.3
           [Caenorhabditis elegans]
          Length = 331

 Score =  675 bits (1741), Expect = 0.0
 Identities = 331/331 (100%), Positives = 331/331 (100%)
 Frame = -1

Query: 996 MPVKVLNFPSVVLQHFLVGLTSTELFELTQCSLKSKDRVRPYEKSNKTFRMAVDFQRNWV 817
           MPVKVLNFPSVVLQHFLVGLTSTELFELTQCSLKSKDRVRPYEKSNKTFRMAVDFQRNWV
Sbjct: 1   MPVKVLNFPSVVLQHFLVGLTSTELFELTQCSLKSKDRVRPYEKSNKTFRMAVDFQRNWV 60

Query: 816 DIRGVYRFYVKELVDGKLPKTYGKMGVREFGDKKVQVELDENEKTINIFWPTTEKEDRTF 637
           DIRGVYRFYVKELVDGKLPKTYGKMGVREFGDKKVQVELDENEKTINIFWPTTEKEDRTF
Sbjct: 61  DIRGVYRFYVKELVDGKLPKTYGKMGVREFGDKKVQVELDENEKTINIFWPTTEKEDRTF 120

Query: 636 AVMKVAEHFIYTLGLGEFESVTLGQENHAGRIIDWANEKNLNIANFTIGNVDKEHDDVDK 457
           AVMKVAEHFIYTLGLGEFESVTLGQENHAGRIIDWANEKNLNIANFTIGNVDKEHDDVDK
Sbjct: 121 AVMKVAEHFIYTLGLGEFESVTLGQENHAGRIIDWANEKNLNIANFTIGNVDKEHDDVDK 180

Query: 456 VAEKLYSASFFKKVSANFKCLINPTEAFKPNEFLPGIPKNTNMIFFHGAHWMTIDTLKDF 277
           VAEKLYSASFFKKVSANFKCLINPTEAFKPNEFLPGIPKNTNMIFFHGAHWMTIDTLKDF
Sbjct: 181 VAEKLYSASFFKKVSANFKCLINPTEAFKPNEFLPGIPKNTNMIFFHGAHWMTIDTLKDF 240

Query: 276 TACSVILYDCKFTNKDINEFIKLWKNKEFERIFYISINVPQGSGFKLTEVIAGLDGFGEI 97
           TACSVILYDCKFTNKDINEFIKLWKNKEFERIFYISINVPQGSGFKLTEVIAGLDGFGEI
Sbjct: 241 TACSVILYDCKFTNKDINEFIKLWKNKEFERIFYISINVPQGSGFKLTEVIAGLDGFGEI 300

Query: 96  ENDATTMKREDGKEIEVSVLDEKKQIRIVVD 4
           ENDATTMKREDGKEIEVSVLDEKKQIRIVVD
Sbjct: 301 ENDATTMKREDGKEIEVSVLDEKKQIRIVVD 331




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