Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= F57B10_9
         (843 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17508423|ref|NP_491894.1| microtubule severing protein essent...   486   e-136
gi|17507427|ref|NP_493453.1| katanin p80 (78.6 kD) (1O656) [Caen...   152   1e-35
gi|39595734|emb|CAE67237.1| Hypothetical protein CBG12676 [Caeno...   149   6e-35
gi|39583049|emb|CAE71828.1| Hypothetical protein CBG18869 [Caeno...   148   1e-34
gi|17507429|ref|NP_493452.1| putative protein (1O654) [Caenorhab...   122   1e-26
gi|39579441|emb|CAE56162.1| Hypothetical protein CBG23782 [Caeno...   107   4e-22
gi|47209290|emb|CAF89573.1| unnamed protein product [Tetraodon n...    36   0.92
gi|18415801|ref|NP_568194.1| transducin family protein / WD-40 r...    36   1.2
gi|10178281|emb|CAC08339.1| katanin p80 subunit-like protein [Ar...    36   1.2
gi|34555954|emb|CAB04274.2| Hypothetical protein F35E12.4 [Caeno...    35   1.6
gi|17560556|ref|NP_506400.1| putative membrane protein family me...    35   1.6
gi|23482734|gb|EAA18628.1| ubiquitin-activating enzyme e1 1 [Pla...    35   2.7
gi|47085751|ref|NP_998183.1| zgc:56071 [Danio rerio] >gnl|BL_ORD...    34   4.6
gi|24642416|ref|NP_727940.1| CG13956-PA [Drosophila melanogaster...    34   4.6
gi|19528359|gb|AAL90294.1| LD44201p [Drosophila melanogaster]          34   4.6
gi|6979998|gb|AAF34688.1| putative microtubule severing protein ...    34   4.6
gi|11499306|ref|NP_070545.1| hypothetical protein [Archaeoglobus...    33   6.0
gi|399290|sp|P31968|CPCF_SYNP2 PHYCOCYANOBILIN LYASE BETA SUBUNI...    33   7.8
gi|38049094|gb|AAR10354.1| RNA polymerase B subunit [Amoeba prot...    33   7.8


>gi|17508423|ref|NP_491894.1| microtubule severing protein essential
           for female meiotic spindle function; C-terminal region
           is similar to katanin p80, defective MEIosis MEI-2 (31.5
           kD) (mei-2) [Caenorhabditis elegans]
 gi|7504501|pir||T32747 hypothetical protein F57B10.12 -
           Caenorhabditis elegans
 gi|2773212|gb|AAB96729.1| Defective meiosis protein 2
           [Caenorhabditis elegans]
 gi|7407667|gb|AAF62184.1| MEI-2 [Caenorhabditis elegans]
          Length = 280

 Score =  486 bits (1250), Expect = e-136
 Identities = 249/280 (88%), Positives = 249/280 (88%)
 Frame = -1

Query: 843 MSGLDDRKKLTHAKNRKPLNDIPKSAENRPNXXXXXXXRGAEKDVPITFIGSSRTVKADL 664
           MSGLDDRKKLTHAKNRKPLNDIPKSAENRPN       RGAEKDVPITFIGSSRTVKADL
Sbjct: 1   MSGLDDRKKLTHAKNRKPLNDIPKSAENRPNTRSTSSRRGAEKDVPITFIGSSRTVKADL 60

Query: 663 PEFTNTRSRRPLHSESKKELSRNPVSRGEEHXXXXXXXXXXXXXXXXXXXXXXXXACTEE 484
           PEFTNTRSRRPLHSESKKELSRNPVSRGEEH                        ACTEE
Sbjct: 61  PEFTNTRSRRPLHSESKKELSRNPVSRGEEHSSSLPKSSPESSVSVMSSNASLWSACTEE 120

Query: 483 VNKIGVCAKRESRNLRVYKMKSFTSNMEQILSNDNQLAPTVIRILNSRNSWCLNSCHACL 304
           VNKIGVCAKRESRNLRVYKMKSFTSNMEQILSNDNQLAPTVIRILNSRNSWCLNSCHACL
Sbjct: 121 VNKIGVCAKRESRNLRVYKMKSFTSNMEQILSNDNQLAPTVIRILNSRNSWCLNSCHACL 180

Query: 303 TFIMENITSDNYGKRSACLKALASITNSLLDTIIGFASTKTRRIGVDVVAEERAAKATEC 124
           TFIMENITSDNYGKRSACLKALASITNSLLDTIIGFASTKTRRIGVDVVAEERAAKATEC
Sbjct: 181 TFIMENITSDNYGKRSACLKALASITNSLLDTIIGFASTKTRRIGVDVVAEERAAKATEC 240

Query: 123 IHNFRKIVKNRDKIYKQIDQETIYKLDAILERLKKVSSHK 4
           IHNFRKIVKNRDKIYKQIDQETIYKLDAILERLKKVSSHK
Sbjct: 241 IHNFRKIVKNRDKIYKQIDQETIYKLDAILERLKKVSSHK 280




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