Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= F57B1_4
(1071 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|7504495|pir||T22827 hypothetical protein F57B1.4 - Caenorhabd... 317 4e-85
gi|39593181|emb|CAE64650.1| Hypothetical protein CBG09421 [Caeno... 241 3e-62
gi|39593182|emb|CAE64651.1| Hypothetical protein CBG09422 [Caeno... 118 4e-48
gi|32567317|ref|NP_506284.2| COLlagen structural gene (30.3 kD) ... 180 4e-44
gi|17561542|ref|NP_506283.1| COLlagen structural gene (col-159) ... 164 4e-39
gi|17559060|ref|NP_505677.1| COLlagen structural gene (col-13) [... 147 3e-34
gi|17559058|ref|NP_505678.1| COLlagen structural gene (30.1 kD) ... 147 3e-34
gi|1814029|gb|AAB41793.1| cuticle collagen [Caenorhabditis brigg... 144 5e-33
gi|39593349|emb|CAE64819.1| Hypothetical protein CBG09613 [Caeno... 144 5e-33
gi|39581442|emb|CAE74724.1| Hypothetical protein CBG22542 [Caeno... 130 4e-29
gi|17541194|ref|NP_499905.1| COLlagen structural gene (col-101) ... 127 6e-28
gi|39586875|emb|CAE62810.1| Hypothetical protein CBG06986 [Caeno... 109 9e-23
gi|17543526|ref|NP_502966.1| predicted CDS, COLlagen structural ... 108 2e-22
gi|17532495|ref|NP_493660.1| COLlagen structural gene (col-68) [... 107 5e-22
gi|39587054|emb|CAE62989.1| Hypothetical protein CBG07217 [Caeno... 106 1e-21
gi|17536229|ref|NP_493913.1| COLlagen structural gene (col-40) [... 96 1e-18
gi|22096343|sp|P34804|CC40_CAEEL Cuticle collagen 40 96 1e-18
gi|39585576|emb|CAE65336.1| Hypothetical protein CBG10272 [Caeno... 94 4e-18
gi|17536359|ref|NP_496665.1| COLlagen structural gene (col-85) [... 93 1e-17
gi|17533809|ref|NP_496362.1| COLlagen structural gene (29.2 kD) ... 91 6e-17
gi|39597358|emb|CAE59586.1| Hypothetical protein CBG02987 [Caeno... 90 8e-17
gi|7494557|pir||T37286 collagen 40 - Caenorhabditis elegans >gnl... 84 7e-15
gi|39587231|emb|CAE57699.1| Hypothetical protein CBG00703 [Caeno... 81 4e-14
gi|17535253|ref|NP_495759.1| COLlagen structural gene (29.4 kD) ... 81 4e-14
gi|17531395|ref|NP_495104.1| BLIstered cuticle BLI-2, Nematode c... 80 1e-13
gi|39596930|emb|CAE59157.1| Hypothetical protein CBG02463 [Caeno... 79 2e-13
gi|4335794|gb|AAD17458.1| cuticular collagen [Ascaris suum] 69 2e-10
gi|17533115|ref|NP_494880.1| COLlagen structural gene (col-73) [... 67 5e-10
gi|7498929|pir||T29980 hypothetical protein F11G11.10 - Caenorha... 67 5e-10
gi|39579269|emb|CAE56956.1| Hypothetical protein CBG24806 [Caeno... 67 7e-10
gi|32566596|ref|NP_872268.1| COLlagen structural gene (col-171) ... 67 7e-10
gi|32566594|ref|NP_872267.1| COLlagen structural gene (col-170) ... 66 1e-09
gi|7507620|pir||T16841 hypothetical protein T10E10.2 - Caenorhab... 66 2e-09
gi|17569753|ref|NP_509060.1| COLlagen structural gene (28.5 kD) ... 66 2e-09
gi|30025105|gb|AAP13769.1| Hypothetical protein T07H6.3b [Caenor... 66 2e-09
gi|17569755|ref|NP_509059.1| COLlagen structural gene (28.5 kD) ... 66 2e-09
gi|39585827|emb|CAE61240.1| Hypothetical protein CBG05040 [Caeno... 66 2e-09
gi|39585825|emb|CAE61238.1| Hypothetical protein CBG05038 [Caeno... 66 2e-09
gi|17550996|ref|NP_509960.1| COLlagen structural gene (col-180Co... 66 2e-09
gi|39585828|emb|CAE61241.1| Hypothetical protein CBG05041 [Caeno... 66 2e-09
gi|17569675|ref|NP_509051.1| COLlagen structural gene (col-166) ... 66 2e-09
gi|17567743|ref|NP_509276.1| COLlagen structural gene (30.0 kD) ... 65 2e-09
gi|1236783|emb|CAA65506.1| cuticular collagen [Teladorsagia circ... 65 2e-09
gi|1236781|emb|CAA65507.1| cuticular collagen [Teladorsagia circ... 65 2e-09
gi|32566570|ref|NP_872255.1| COLlagen structural gene (28.4 kD) ... 65 3e-09
gi|39597359|emb|CAE59587.1| Hypothetical protein CBG02988 [Caeno... 64 5e-09
gi|39585824|emb|CAE61237.1| Hypothetical protein CBG05037 [Caeno... 64 5e-09
gi|39594125|emb|CAE70235.1| Hypothetical protein CBG16724 [Caeno... 64 5e-09
gi|39585826|emb|CAE61239.1| Hypothetical protein CBG05039 [Caeno... 64 6e-09
gi|39585817|emb|CAE61230.1| Hypothetical protein CBG05029 [Caeno... 64 6e-09
gi|563237|gb|AAC46628.1| cuticular collagen Bmcol-2 64 8e-09
gi|17533807|ref|NP_496361.1| COLlagen structural gene (30.9 kD) ... 63 1e-08
gi|7378665|emb|CAB85468.1| putative cuticular collagen [Brugia p... 59 1e-07
gi|5514647|emb|CAB50767.1| putative cuticular collagen protein [... 59 1e-07
gi|39591241|emb|CAE73294.1| Hypothetical protein CBG20714 [Caeno... 58 3e-07
gi|1813688|gb|AAC47626.1| unknown [Brugia malayi] >gnl|BL_ORD_ID... 58 4e-07
gi|17532621|ref|NP_494879.1| COLlagen structural gene (col-20) [... 57 6e-07
gi|46195903|gb|AAB37842.2| Collagen protein 20 [Caenorhabditis e... 57 6e-07
gi|32567349|ref|NP_872207.1| COLlagen structural gene (col-42) [... 55 3e-06
gi|17551382|ref|NP_508395.1| DumPY : shorter than wild-type DPY-... 54 5e-06
gi|7494563|pir||T34507 cutical collagen 6 - Caenorhabditis elegans 54 6e-06
gi|32563818|ref|NP_871912.1| ROLler: helically twisted, animals ... 54 6e-06
gi|39595982|emb|CAE67485.1| Hypothetical protein CBG12990 [Caeno... 54 6e-06
gi|17535689|ref|NP_495582.1| ROLler: helically twisted, animals ... 54 6e-06
gi|84433|pir||JS0167 collagen col-6 - Caenorhabditis elegans >gn... 54 6e-06
gi|48060128|gb|AAK68452.2| Collagen protein 108 [Caenorhabditis ... 54 8e-06
gi|17543264|ref|NP_500133.1| COLlagen structural gene (col-108) ... 54 8e-06
gi|39585160|emb|CAE57403.1| Hypothetical protein CBG00356 [Caeno... 54 8e-06
gi|17539404|ref|NP_503048.1| COLlagen structural gene (28.0 kD) ... 54 8e-06
gi|7508918|pir||T26125 hypothetical protein W03G11.1 - Caenorhab... 52 2e-05
gi|17570227|ref|NP_510021.1| COLlagen structural gene (col-181) ... 52 2e-05
gi|39596236|emb|CAE69873.1| Hypothetical protein CBG16210 [Caeno... 52 2e-05
gi|39578930|emb|CAE57041.1| Hypothetical protein CBG24927 [Caeno... 52 3e-05
gi|32453014|gb|AAA96159.2| Collagen protein 33 [Caenorhabditis e... 51 4e-05
gi|7496625|pir||T15670 hypothetical protein C27H5.5 - Caenorhabd... 51 4e-05
gi|17532623|ref|NP_495487.1| COLlagen structural gene (col-36) [... 51 4e-05
gi|17539482|ref|NP_501829.1| COLlagen structural gene (col-2) [C... 51 5e-05
gi|17538876|ref|NP_502107.1| COLlagen structural gene (28.7 kD) ... 51 5e-05
gi|39593732|emb|CAE62024.1| Hypothetical protein CBG06035 [Caeno... 51 5e-05
gi|21954120|gb|AAM80556.1| cuticular collagen [Trichinella spira... 51 5e-05
gi|39594094|emb|CAE70204.1| Hypothetical protein CBG16679 [Caeno... 50 7e-05
gi|345339|pir||JC1448 collagen col-34 - Caenorhabditis elegans >... 50 7e-05
gi|17539484|ref|NP_501527.1| COLlagen structural gene (col-3) [C... 50 7e-05
gi|39580357|emb|CAE61462.1| Hypothetical protein CBG05354 [Caeno... 50 7e-05
gi|17539490|ref|NP_500520.1| abnormal RAy Morphology RAM-4, COLl... 50 7e-05
gi|17551374|ref|NP_510617.1| COLlagen structural gene (col-186) ... 50 7e-05
gi|17510331|ref|NP_491088.1| COLlagen structural gene (col-48) [... 50 7e-05
gi|39595524|emb|CAE60562.1| Hypothetical protein CBG04191 [Caeno... 50 7e-05
gi|39597656|emb|CAE68347.1| Hypothetical protein CBG14077 [Caeno... 50 7e-05
gi|32563747|ref|NP_494878.2| COLlagen structural gene (col-17) [... 50 9e-05
gi|39592016|emb|CAE75236.1| Hypothetical protein CBG23187 [Caeno... 50 1e-04
gi|39592038|emb|CAE75258.1| Hypothetical protein CBG23219 [Caeno... 50 1e-04
gi|39592014|emb|CAE75234.1| Hypothetical protein CBG23185 [Caeno... 50 1e-04
gi|17543328|ref|NP_502808.1| COLlagen structural gene (col-134) ... 49 2e-04
gi|39585732|emb|CAE59934.1| Hypothetical protein CBG03420 [Caeno... 49 2e-04
gi|7378657|emb|CAB85466.1| putative cuticular collagen [Ascaris ... 49 2e-04
gi|39582304|emb|CAE67553.1| Hypothetical protein CBG13078 [Caeno... 49 2e-04
gi|17540822|ref|NP_500071.1| COLlagen structural gene (col-105) ... 49 2e-04
gi|39588210|emb|CAE68135.1| Hypothetical protein CBG13781 [Caeno... 49 2e-04
gi|17561474|ref|NP_505886.1| COLlagen structural gene (29.3 kD) ... 49 2e-04
gi|17542966|ref|NP_501617.1| COLlagen structural gene (col-120) ... 49 3e-04
gi|17564278|ref|NP_505913.1| predicted CDS, COLlagen structural ... 48 4e-04
gi|17531401|ref|NP_493635.1| COLlagen structural gene (col-67Co)... 47 8e-04
gi|39586900|emb|CAE62835.1| Hypothetical protein CBG07014 [Caeno... 47 8e-04
gi|17555472|ref|NP_499410.1| COLlagen structural gene (29.2 kD) ... 47 0.001
gi|687634|gb|AAA62504.1| collagen 46 0.001
gi|17567513|ref|NP_509121.1| COLlagen structural gene (35.0 kD) ... 46 0.001
gi|115401|sp|P16253|CAC3_HAECO Cuticle collagen 3A3 >gnl|BL_ORD_... 46 0.002
gi|321006|pir||A44984 collagen - nematode (Haemonchus contortus) 46 0.002
gi|39586422|emb|CAE74080.1| Hypothetical protein CBG21735 [Caeno... 45 0.002
gi|33589142|emb|CAE45096.1| Hypothetical protein Y51H4A.28 [Caen... 45 0.002
gi|17555478|ref|NP_499409.1| COLlagen structural gene (29.2 kD) ... 45 0.004
gi|17555480|ref|NP_499408.1| COLlagen structural gene (29.2 kD) ... 45 0.004
gi|39586769|emb|CAE65811.1| Hypothetical protein CBG10919 [Caeno... 44 0.005
gi|39591778|emb|CAE71356.1| Hypothetical protein CBG18259 [Caeno... 44 0.006
gi|17539488|ref|NP_500524.1| COLlagen structural gene (col-33) [... 44 0.006
gi|39584177|emb|CAE61552.1| Hypothetical protein CBG05461 [Caeno... 44 0.006
gi|17539418|ref|NP_501561.1| COLlagen structural gene (col-119) ... 44 0.006
gi|17567621|ref|NP_509162.1| COLlagen structural gene (col-173) ... 44 0.006
gi|33285161|gb|AAC48094.2| Dumpy : shorter than wild-type protei... 44 0.008
gi|17566746|ref|NP_505074.1| COLlagen structural gene (29.5 kD) ... 44 0.008
gi|39590411|emb|CAE66150.1| Hypothetical protein CBG11380 [Caeno... 44 0.008
gi|39595279|emb|CAE60316.1| Hypothetical protein CBG03907 [Caeno... 44 0.008
gi|17540574|ref|NP_502700.1| COLlagen structural gene (col-133) ... 43 0.011
gi|17538760|ref|NP_501867.1| COLlagen structural gene (29.1 kD) ... 43 0.011
gi|25145834|ref|NP_501273.2| COLlagen structural gene (col-14) [... 43 0.011
gi|17550810|ref|NP_509869.1| COLlagen structural gene (27.8 kD) ... 43 0.011
gi|17550812|ref|NP_509870.1| COLlagen structural gene (col-179) ... 43 0.011
gi|84431|pir||JS0169 collagen col-14 - Caenorhabditis elegans >g... 43 0.011
gi|7497485|pir||T29810 hypothetical protein C46A5.3 - Caenorhabd... 43 0.011
gi|39595004|emb|CAE70872.1| Hypothetical protein CBG17662 [Caeno... 43 0.011
gi|39586728|emb|CAE65770.1| Hypothetical protein CBG10862 [Caeno... 43 0.014
gi|39594818|emb|CAE70686.1| Hypothetical protein CBG17403 [Caeno... 43 0.014
gi|32565764|ref|NP_871702.1| COLlagen structural gene (col-95) [... 42 0.024
gi|39591777|emb|CAE71355.1| Hypothetical protein CBG18258 [Caeno... 42 0.024
gi|17507553|ref|NP_490679.1| COLlagen structural gene (col-45) [... 42 0.024
gi|25153764|ref|NP_741423.1| COLlagen structural gene (28.9 kD) ... 42 0.032
gi|39579438|emb|CAE56766.1| Hypothetical protein CBG24569 [Caeno... 42 0.032
gi|39584782|emb|CAE67677.1| Hypothetical protein CBG13240 [Caeno... 42 0.032
gi|1222642|emb|CAA63070.1| collagen [Brugia pahangi] 41 0.041
gi|32565788|ref|NP_871711.1| predicted CDS, COLlagen structural ... 41 0.041
gi|39594817|emb|CAE70685.1| Hypothetical protein CBG17402 [Caeno... 41 0.041
gi|39584181|emb|CAE61556.1| Hypothetical protein CBG05465 [Caeno... 40 0.071
gi|1589837|gb|AAC48358.1| cuticle preprocollagen [Meloidogyne in... 40 0.071
gi|39579268|emb|CAE56955.1| Hypothetical protein CBG24805 [Caeno... 40 0.092
gi|39580360|emb|CAE61465.1| Hypothetical protein CBG05357 [Caeno... 40 0.092
gi|17507951|ref|NP_491958.1| COLlagen structural gene (col-59) [... 40 0.12
gi|39593552|emb|CAE61844.1| Hypothetical protein CBG05818 [Caeno... 40 0.12
gi|39581447|emb|CAE74729.1| Hypothetical protein CBG22547 [Caeno... 39 0.16
gi|17539522|ref|NP_501150.1| COLlagen structural gene (col-114) ... 39 0.21
gi|39584781|emb|CAE67676.1| Hypothetical protein CBG13239 [Caeno... 39 0.21
gi|39592242|emb|CAE75463.1| Hypothetical protein CBG23461 [Caeno... 39 0.27
gi|17563290|ref|NP_506095.1| COLlagen structural gene, SQuaT SQT... 39 0.27
gi|17553060|ref|NP_499703.1| COLlagen structural gene (col-98) [... 38 0.35
gi|17551424|ref|NP_510247.1| COLlagen structural gene (col-183) ... 38 0.35
gi|39588940|emb|CAE69570.1| Hypothetical protein CBG15782 [Caeno... 38 0.46
gi|39585707|emb|CAE59909.1| Hypothetical protein CBG03393 [Caeno... 38 0.46
gi|320995|pir||A44982 collagen UCOL1 - pig roundworm (fragment) ... 38 0.46
gi|17561476|ref|NP_505888.1| COLlagen structural gene (col-155) ... 37 0.78
gi|687636|gb|AAA62505.1| collagen [Caenorhabditis elegans] 37 0.78
gi|17536751|ref|NP_495952.1| predicted CDS, COLlagen structural ... 37 1.0
gi|39596527|emb|CAE63146.1| Hypothetical protein CBG07448 [Caeno... 36 1.3
gi|39595798|emb|CAE67301.1| Hypothetical protein CBG12754 [Caeno... 36 1.3
gi|115397|sp|P08124|CC01_CAEEL Cuticle collagen 1 precursor (Squ... 36 1.3
gi|1184072|gb|AAC47437.1| COL-1 35 2.3
gi|50285125|ref|XP_444991.1| unnamed protein product [Candida gl... 35 2.3
gi|15077111|gb|AAK83075.1| collagen [Meloidogyne javanica] 35 3.9
gi|50308337|ref|XP_454170.1| unnamed protein product [Kluyveromy... 35 3.9
gi|34878291|ref|XP_346097.1| similar to opioid growth factor rec... 35 3.9
gi|20521976|dbj|BAB21822.2| KIAA1731 protein [Homo sapiens] 35 3.9
gi|42659780|ref|XP_374922.1| KIAA1731 protein [Homo sapiens] 35 3.9
gi|32411243|ref|XP_326102.1| hypothetical protein [Neurospora cr... 35 3.9
gi|39598359|emb|CAE69052.1| Hypothetical protein CBG15061 [Caeno... 35 3.9
gi|45383374|ref|NP_989724.1| RecQ protein-like (DNA helicase Q1-... 34 5.1
gi|17543166|ref|NP_500138.1| COLlagen structural gene (29.0 kD) ... 34 5.1
gi|39596499|emb|CAE63118.1| Hypothetical protein CBG07415 [Caeno... 34 5.1
gi|50305509|ref|XP_452714.1| unnamed protein product [Kluyveromy... 34 5.1
gi|48763005|ref|ZP_00267562.1| hypothetical protein Rrub02003719... 34 5.1
gi|419944|pir||B44982 collagen COLA4 - pig roundworm >gnl|BL_ORD... 34 5.1
gi|29247789|gb|EAA39341.1| GLP_177_24636_24022 [Giardia lamblia ... 34 6.6
gi|39583745|emb|CAE63849.1| Hypothetical protein CBG08408 [Caeno... 34 6.6
gi|50309297|ref|XP_454655.1| unnamed protein product [Kluyveromy... 34 6.6
gi|39596730|emb|CAE63349.1| Hypothetical protein CBG07751 [Caeno... 34 6.6
gi|17551704|ref|NP_508747.1| COLlagen structural gene (33.9 kD) ... 33 8.6
gi|7498195|pir||T34203 hypothetical protein D2024.8 - Caenorhabd... 33 8.6
gi|23482650|gb|EAA18573.1| hypothetical protein [Plasmodium yoel... 33 8.6
gi|39584784|emb|CAE67679.1| Hypothetical protein CBG13242 [Caeno... 33 8.6
>gi|7504495|pir||T22827 hypothetical protein F57B1.4 - Caenorhabditis
elegans
Length = 356
Score = 317 bits (811), Expect = 4e-85
Identities = 161/213 (75%), Positives = 161/213 (75%)
Frame = -1
Query: 1071 MAEHTGVIDKAVEGGEKPNGSWFEFLASALPYYVLSEYYTLASIKGMTRQWSNHLTTRSC 892
MAEHTGVIDKAVEGGEKPNGSWFEFLASALPYYVLSEYYTLASIKGMTRQWSNHLTTRSC
Sbjct: 1 MAEHTGVIDKAVEGGEKPNGSWFEFLASALPYYVLSEYYTLASIKGMTRQWSNHLTTRSC 60
Query: 891 PFSHFSTIATLTAIVAVPMLYNYMQHVQSSLQSEVEFCAHRSNGLWDEYQRFEGVSGVAG 712
PFSHFSTIATLTAIVAVPMLYNYMQHVQSSLQSEVEFCAHRSNGLWDEYQRFEGVSGVAG
Sbjct: 61 PFSHFSTIATLTAIVAVPMLYNYMQHVQSSLQSEVEFCAHRSNGLWDEYQRFEGVSGVAG 120
Query: 711 RIKRESYHRRASGPHRASKVRRQSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 532
RIKRESYHRRASGPHRASKVRRQSY
Sbjct: 121 RIKRESYHRRASGPHRASKVRRQSYGADAAVGGFGGSAGGSCCSCGTGAAGPAGSPGQDG 180
Query: 531 XXXXXXXXXXXXXXXXXASEDQTAGPDSFCFDC 433
ASEDQTAGPDSFCFDC
Sbjct: 181 APGNDGAPGAPGNPGQDASEDQTAGPDSFCFDC 213
Score = 45.4 bits (106), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -1
Query: 54 SEGACDHCPPPRTAPGY 4
SEGACDHCPPPRTAPGY
Sbjct: 340 SEGACDHCPPPRTAPGY 356