Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= F58E6_7
         (915 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17561634|ref|NP_505516.1| vesicle-associated membrane protein...   566   e-160
gi|39593226|emb|CAE64695.1| Hypothetical protein CBG09477 [Caeno...   313   3e-84
gi|39592467|emb|CAE63544.1| Hypothetical protein CBG08027 [Caeno...   273   3e-72
gi|17543196|ref|NP_500200.1| major sperm protein  domain contain...    76   9e-13
gi|39587192|emb|CAE57660.1| Hypothetical protein CBG00650 [Caeno...    69   2e-10
gi|23509599|ref|NP_702266.1| vesicle-associated membrane protein...    58   3e-07
gi|23483569|gb|EAA19198.1| hypothetical protein [Plasmodium yoel...    52   2e-05
gi|6320966|ref|NP_011046.1| Protein likely to be involved in reg...    47   5e-04
gi|50288189|ref|XP_446523.1| unnamed protein product [Candida gl...    45   0.002
gi|41629673|ref|NP_009461.2| SCS2 homologue; Ybl091c-ap [Sacchar...    42   0.019
gi|49094164|ref|XP_408543.1| hypothetical protein AN4406.2 [Aspe...    41   0.033
gi|45200815|ref|NP_986385.1| AGL282Wp [Eremothecium gossypii] >g...    39   0.16
gi|32406556|ref|XP_323891.1| predicted protein [Neurospora crass...    39   0.16
gi|15241669|ref|NP_195825.1| mitochondrial glycoprotein family p...    39   0.21
gi|21592321|gb|AAM64272.1| unknown [Arabidopsis thaliana]              39   0.21
gi|46435796|gb|EAK95170.1| hypothetical protein CaO19.4072 [Cand...    38   0.28
gi|49069870|ref|XP_399224.1| hypothetical protein UM01609.1 [Ust...    38   0.28
gi|39591543|emb|CAE71119.1| Hypothetical protein CBG17972 [Caeno...    38   0.28
gi|17558002|ref|NP_506565.1| predicted CDS, MSP-domain protein 2...    38   0.28
gi|39595208|emb|CAE60245.1| Hypothetical protein CBG03818 [Caeno...    38   0.36
gi|115958|sp|P25917|CD19_CAVPO B-lymphocyte antigen CD19 (B-lymp...    37   0.47
gi|46435639|gb|EAK95016.1| hypothetical protein CaO19.11553 [Can...    37   0.47
gi|38103077|gb|EAA49828.1| predicted protein [Magnaporthe grisea...    37   0.62
gi|21223747|ref|NP_629526.1| large hypothetical protein [Strepto...    37   0.62
gi|3087852|emb|CAA05618.1| circumsporozoite protein [Plasmodium ...    37   0.62
gi|3087864|emb|CAA05624.1| circumsporozoite protein [Plasmodium ...    37   0.62
gi|17542484|ref|NP_502216.1| MSP-domain protein 2 like family me...    37   0.62
gi|28207148|gb|AAO37214.1| hypothetical protein [Arabidopsis tha...    37   0.81
gi|42569994|ref|NP_182220.2| basic helix-loop-helix (bHLH) prote...    37   0.81
gi|3087850|emb|CAA05617.1| circumsporozoite protein [Plasmodium ...    37   0.81
gi|17561266|ref|NP_505801.1| protein of unknown function C6 and ...    37   0.81
gi|23508432|ref|NP_701101.1| hypothetical protein [Plasmodium fa...    37   0.81
gi|3087880|emb|CAA04812.1| circumsporozoite [Plasmodium malariae]      37   0.81
gi|7485491|pir||T02190 hypothetical protein At2g46970 [imported]...    37   0.81
gi|9022429|gb|AAF82380.1| spore coat structural protein SP65 [Di...    36   1.1
gi|3087848|emb|CAA05616.1| circumsporozoite protein [Plasmodium ...    36   1.1
gi|3087856|emb|CAA05620.1| circumsporozoite protein [Plasmodium ...    36   1.1
gi|3087866|emb|CAA04809.1| circumsporozoite [Plasmodium malariae]      36   1.1
gi|48097040|ref|XP_397488.1| hypothetical protein XP_397488 [Api...    36   1.1
gi|45198460|ref|NP_985489.1| AFL059Cp [Eremothecium gossypii] >g...    36   1.4
gi|50749983|ref|XP_421822.1| PREDICTED: similar to chmadrin (sho...    35   1.8
gi|23484568|gb|EAA19859.1| Homo sapiens dJ191N21.1-related [Plas...    35   1.8
gi|3087862|emb|CAA05623.1| circumsporozoite protein [Plasmodium ...    35   1.8
gi|117590|sp|P13815|CSP_PLAMA Circumsporozoite protein precursor...    35   1.8
gi|3087860|emb|CAA05622.1| circumsporozoite protein [Plasmodium ...    35   1.8
gi|49070302|ref|XP_399440.1| predicted protein [Ustilago maydis ...    35   2.3
gi|42572975|ref|NP_974584.1| vesicle-associated membrane family ...    35   2.3
gi|117577|sp|P14593|CSP_PLABR Circumsporozoite protein (CS) >gnl...    35   2.3
gi|15894026|ref|NP_347375.1| Predicted membrane protein [Clostri...    35   2.3
gi|3087870|emb|CAA04811.1| circumsporozoite [Plasmodium malariae]      35   2.3
gi|320931|pir||A60610 circumsporozoite protein precursor - Plasm...    35   2.3
gi|18415696|ref|NP_567627.1| vesicle-associated membrane family ...    35   2.3
gi|46131294|ref|ZP_00169437.2| COG0642: Signal transduction hist...    35   2.3
gi|495524|gb|AAA18618.1| circumsporozoite protein >gnl|BL_ORD_ID...    35   3.1
gi|7485721|pir||T05153 hypothetical protein F18E5.70 - Arabidops...    35   3.1
gi|30687340|ref|NP_189050.2| KRR1 family protein [Arabidopsis th...    35   3.1
gi|46106921|ref|ZP_00188059.2| COG0566: rRNA methylases [Rubroba...    35   3.1
gi|9294677|dbj|BAB03026.1| unnamed protein product [Arabidopsis ...    35   3.1
gi|28379431|ref|NP_786323.1| cell surface protein precursor (put...    34   4.0
gi|38104264|gb|EAA50858.1| hypothetical protein MG04617.4 [Magna...    34   4.0
gi|15614281|ref|NP_242584.1| BH1718~unknown conserved protein [B...    34   4.0
gi|21223203|ref|NP_628982.1| putative membrane protein [Streptom...    34   4.0
gi|22972727|ref|ZP_00019590.1| hypothetical protein [Chloroflexu...    34   4.0
gi|1709138|sp|P53022|MSP2_GLORO Major sperm protein 2 >gnl|BL_OR...    34   4.0
gi|45188073|ref|NP_984296.1| ADR200Cp [Eremothecium gossypii] >g...    34   5.2
gi|16119581|ref|NP_396287.1| AGR_pAT_511p [Agrobacterium tumefac...    34   5.2
gi|49073992|ref|XP_401162.1| hypothetical protein UM03547.1 [Ust...    34   5.2
gi|10880827|gb|AAG24397.1| HER-1 protein [Danio rerio]                 34   5.2
gi|18858789|ref|NP_571153.1| hairy-related 1; etID309753.5 [Dani...    34   5.2
gi|17938938|ref|NP_535726.1| autotransporter protein [Agrobacter...    34   5.2
gi|7489917|pir||JC6552 DNA topoisomerase (EC 5.99.1.2) - slime m...    34   5.2
gi|9626871|ref|NP_041141.1| ORF 50 [Ictalurid herpesvirus 1] >gn...    34   5.2
gi|15594708|ref|NP_212497.1| periplasmic protein [Borrelia burgd...    34   5.2
gi|49899074|gb|AAH76794.1| Unknown (protein for MGC:83722) [Xeno...    34   5.2
gi|31204337|ref|XP_311117.1| ENSANGP00000017360 [Anopheles gambi...    33   6.8
gi|49117006|gb|AAH73055.1| Unknown (protein for MGC:82685) [Xeno...    33   6.8
gi|160186|gb|AAA29535.1| circumsporozoite protein                      33   6.8
gi|1709136|sp|P53021|MSP1_GLORO Major sperm protein 1 >gnl|BL_OR...    33   6.8
gi|1709139|sp|P53023|MSP3_GLORO Major sperm protein 3 >gnl|BL_OR...    33   6.8
gi|33300172|emb|CAE17819.1| Hypothetical protein F52F12.8 [Caeno...    33   6.8
gi|32409359|ref|XP_325160.1| predicted protein [Neurospora crass...    33   6.8
gi|47226997|emb|CAG05889.1| unnamed protein product [Tetraodon n...    33   6.8
gi|23507988|ref|NP_700658.1| hypothetical protein [Plasmodium fa...    33   8.9
gi|46442825|gb|EAL02111.1| hypothetical protein CaO19.807 [Candi...    33   8.9
gi|50304725|ref|XP_452318.1| unnamed protein product [Kluyveromy...    33   8.9
gi|23509527|ref|NP_702194.1| hypothetical protein [Plasmodium fa...    33   8.9
gi|49076516|ref|XP_402224.1| hypothetical protein UM04609.1 [Ust...    33   8.9
gi|18423592|ref|NP_568804.1| vesicle-associated membrane family ...    33   8.9
gi|2769728|gb|AAC40340.1| HN1 [Human herpesvirus 6]                    33   8.9
gi|46442953|gb|EAL02238.1| hypothetical protein CaO19.8426 [Cand...    33   8.9
gi|7489902|pir||T14476 pslA protein - slime mold (Dictyostelium ...    33   8.9
gi|49482652|ref|YP_039876.1| exotoxin [Staphylococcus aureus sub...    33   8.9
gi|32398921|emb|CAD98386.1| conserved hypothetical protein [Cryp...    33   8.9
gi|8809582|dbj|BAA97133.1| membrane associated protein [Arabidop...    33   8.9
gi|15605978|ref|NP_213355.1| putative protein [Aquifex aeolicus ...    33   8.9
gi|47458993|ref|YP_015855.1| valyl-tRNA synthetase [Mycoplasma m...    33   8.9


>gi|17561634|ref|NP_505516.1| vesicle-associated membrane protein
           like (32.7 kD) (5K234) [Caenorhabditis elegans]
 gi|7504645|pir||T22921 hypothetical protein F58E6.5 -
           Caenorhabditis elegans
 gi|3877872|emb|CAA94775.1| Hypothetical protein F58E6.5
           [Caenorhabditis elegans]
          Length = 304

 Score =  566 bits (1460), Expect = e-160
 Identities = 286/304 (94%), Positives = 286/304 (94%)
 Frame = -1

Query: 915 MTTAPDLTKVVFNPSKSVTFAPVEKKQAVSIEVINNSTSDVAVKFKNTGPNVYKTQPPQA 736
           MTTAPDLTKVVFNPSKSVTFAPVEKKQAVSIEVINNSTSDVAVKFKNTGPNVYKTQPPQA
Sbjct: 1   MTTAPDLTKVVFNPSKSVTFAPVEKKQAVSIEVINNSTSDVAVKFKNTGPNVYKTQPPQA 60

Query: 735 KIGVGEKKVFKCIFKGLPKEKCKTNDRFTVVYIAASKNVVIEKAWKNAHKTCTMKHKIAI 556
           KIGVGEKKVFKCIFKGLPKEKCKTNDRFTVVYIAASKNVVIEKAWKNAHKTCTMKHKIAI
Sbjct: 61  KIGVGEKKVFKCIFKGLPKEKCKTNDRFTVVYIAASKNVVIEKAWKNAHKTCTMKHKIAI 120

Query: 555 LFQGVNDQKENETQQPTNNDDDEDKDRQGQLRSKSKVETAKGKKATVVMFVRKXXXXXXX 376
           LFQGVNDQKENETQQPTNNDDDEDKDRQGQLRSKSKVETAKGKKATVVMFVRK
Sbjct: 121 LFQGVNDQKENETQQPTNNDDDEDKDRQGQLRSKSKVETAKGKKATVVMFVRKEGDSVSD 180

Query: 375 XXXXXXXXXXXEHTNPAGVATSNEAGNMSELRTTRPAGAFTGVVASNDNPMSELRTTRPA 196
                      EHTNPAGVATSNEAGNMSELRTTRPAGAFTGVVASNDNPMSELRTTRPA
Sbjct: 181 EEDDEGAVEGAEHTNPAGVATSNEAGNMSELRTTRPAGAFTGVVASNDNPMSELRTTRPA 240

Query: 195 GNFSGQTASTPGGAVDPKSMGLKTTRPAGAFTGQVASNGSTDGQELRTTKPAGTYDNPQK 16
           GNFSGQTASTPGGAVDPKSMGLKTTRPAGAFTGQVASNGSTDGQELRTTKPAGTYDNPQK
Sbjct: 241 GNFSGQTASTPGGAVDPKSMGLKTTRPAGAFTGQVASNGSTDGQELRTTKPAGTYDNPQK 300

Query: 15  KNQK 4
           KNQK
Sbjct: 301 KNQK 304




[DB home][top]