Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= H06O01_3
         (4398 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|32563629|ref|NP_491994.2| chromo domain and SNF2 related doma...  2341   0.0
gi|7504867|pir||T23056 hypothetical protein H06O01.2 - Caenorhab...  2341   0.0
gi|39583607|emb|CAE65711.1| Hypothetical protein CBG10790 [Caeno...  2077   0.0
gi|34857217|ref|XP_218790.2| similar to Chromodomain-helicase-DN...  1023   0.0
gi|6680928|ref|NP_031716.1| chromodomain helicase DNA binding pr...  1021   0.0
gi|476961|pir||A47392 chromodomain-helicase-DNA-binding protein,...  1021   0.0
gi|4557447|ref|NP_001261.1| chromodomain helicase DNA binding pr...  1018   0.0
gi|45384402|ref|NP_990272.1| chromo-helicase-DNA-binding on the ...  1012   0.0
gi|4557449|ref|NP_001262.1| chromodomain helicase DNA binding pr...  1012   0.0
gi|28975395|gb|AAO61783.1| chromo-helicase DNA-binding protein [...  1012   0.0
gi|28975391|gb|AAO61781.1| chromo-helicase DNA-binding protein [...  1008   0.0
gi|17137266|ref|NP_477197.1| CG3733-PA [Drosophila melanogaster]...   971   0.0
gi|7511822|pir||T13944 chromodomain-helicase-DNA-binding protein...   970   0.0
gi|40215423|gb|AAR82736.1| SD21488p [Drosophila melanogaster]         968   0.0
gi|47206405|emb|CAG01534.1| unnamed protein product [Tetraodon n...   957   0.0
gi|5917755|gb|AAD56023.1| chromodomain helicase DNA binding prot...   952   0.0
gi|26340418|dbj|BAC33872.1| unnamed protein product [Mus musculus]    890   0.0
gi|5917754|gb|AAD56022.1| chromodomain helicase DNA binding prot...   887   0.0
gi|5917753|gb|AAD56021.1| chromodomain helicase DNA binding prot...   884   0.0
gi|31211661|ref|XP_314800.1| ENSANGP00000011045 [Anopheles gambi...   882   0.0
gi|5917757|gb|AAD56025.1| chromodomain helicase DNA binding prot...   881   0.0
gi|5917756|gb|AAD56024.1| chromodomain helicase DNA binding prot...   881   0.0
gi|48137452|ref|XP_393364.1| similar to SD21488p [Apis mellifera]     830   0.0
gi|20152037|gb|AAM11378.1| LD39323p [Drosophila melanogaster]         799   0.0
gi|47211143|emb|CAF96563.1| unnamed protein product [Tetraodon n...   754   0.0
gi|50761329|ref|XP_429117.1| PREDICTED: similar to chromodomain ...   747   0.0
gi|34854132|ref|XP_238731.2| similar to Chromodomain-helicase-DN...   687   0.0
gi|49077756|ref|XP_402701.1| hypothetical protein UM05086.1 [Ust...   683   0.0
gi|19115879|ref|NP_594967.1| putative transcriptional regulator;...   682   0.0
gi|42569009|ref|NP_178970.2| chromodomain-helicase-DNA-binding f...   679   0.0
gi|50256686|gb|EAL19409.1| hypothetical protein CNBH1020 [Crypto...   674   0.0
gi|25411492|pir||C84507 hypothetical protein At2g13370 [imported...   673   0.0
gi|45201219|ref|NP_986789.1| AGR123Cp [Eremothecium gossypii] >g...   650   0.0
gi|19114572|ref|NP_593660.1| putative helicase [Schizosaccharomy...   649   0.0
gi|50306047|ref|XP_452985.1| unnamed protein product [Kluyveromy...   647   0.0
gi|50293735|ref|XP_449279.1| unnamed protein product [Candida gl...   644   0.0
gi|11267547|pir||T43334 helicase-related protein hrp1 - fission ...   639   0.0
gi|50426953|ref|XP_462077.1| unnamed protein product [Debaryomyc...   638   0.0
gi|6321012|ref|NP_011091.1| Sole S. cerevisiae member of CHD gen...   636   e-180
gi|46443171|gb|EAL02455.1| hypothetical protein CaO19.10553 [Can...   630   e-179
gi|50547625|ref|XP_501282.1| hypothetical protein [Yarrowia lipo...   625   e-177
gi|46125449|ref|XP_387278.1| hypothetical protein FG07102.1 [Gib...   593   e-168
gi|49086734|ref|XP_405392.1| hypothetical protein AN1255.2 [Aspe...   588   e-166
gi|32420105|ref|XP_330496.1| hypothetical protein [Neurospora cr...   588   e-166
gi|34899102|ref|NP_910897.1| putative chromodomain-helicase-DNA-...   573   e-161
gi|38104231|gb|EAA50830.1| hypothetical protein MG04589.4 [Magna...   555   e-156
gi|34870936|ref|XP_220602.2| similar to zinc-finger helicase [Ra...   501   e-140
gi|3298562|gb|AAC39923.1| zinc-finger helicase [Homo sapiens]         500   e-139
gi|5921743|sp|Q12873|CHD3_HUMAN Chromodomain helicase-DNA-bindin...   500   e-139
gi|23489816|gb|EAA21734.1| chromodomain-helicase-DNA-binding pro...   496   e-138
gi|38088468|ref|XP_145698.4| similar to Chromodomain-helicase-DN...   495   e-138
gi|4325130|gb|AAD17276.1| dMi-2 protein [Drosophila melanogaster]     494   e-138
gi|24667055|ref|NP_649154.2| CG8103-PA [Drosophila melanogaster]...   494   e-138
gi|34858460|ref|XP_232354.2| similar to chromodomain helicase DN...   494   e-137
gi|23508035|ref|NP_700705.1| hypothetical protein [Plasmodium fa...   494   e-137
gi|39204553|ref|NP_666091.1| chromodomain helicase DNA binding p...   494   e-137
gi|26330021|dbj|BAC28749.1| unnamed protein product [Mus musculus]    494   e-137
gi|4557453|ref|NP_001264.1| chromodomain helicase DNA binding pr...   494   e-137
gi|24047226|gb|AAH38596.1| CHD4 protein [Homo sapiens]                494   e-137
gi|2645435|gb|AAB87384.1| CHD3 [Drosophila melanogaster]              493   e-137
gi|24666729|ref|NP_649111.1| CG9594-PA [Drosophila melanogaster]...   490   e-136
gi|47206539|emb|CAF92235.1| unnamed protein product [Tetraodon n...   489   e-136
gi|34872518|ref|XP_243049.2| similar to chromodomain helicase DN...   485   e-135
gi|18400745|ref|NP_565587.1| chromatin remodeling factor CHD3 (P...   484   e-135
gi|28422180|gb|AAH46866.1| B230399n07-prov protein [Xenopus laevis]   483   e-134
gi|24308089|ref|NP_056372.1| chromodomain helicase DNA binding p...   481   e-134
gi|37542688|gb|AAL47203.1| chromatin-remodeling factor CHD3 [Ory...   481   e-134
gi|37542684|gb|AAL47211.1| chromatin-remodeling factor CHD3 [Ory...   481   e-134
gi|31240219|ref|XP_320523.1| ENSANGP00000008665 [Anopheles gambi...   478   e-133
gi|38079062|ref|XP_196334.3| similar to chromodomain helicase DN...   478   e-133
gi|17986031|ref|NP_523441.1| CG3696-PA [Drosophila melanogaster]...   476   e-132
gi|47211690|emb|CAF91815.1| unnamed protein product [Tetraodon n...   473   e-131
gi|17562600|ref|NP_504523.1| CHromoDomain protein, helicase Mi-2...   472   e-131
gi|42567315|ref|NP_194918.2| chromatin remodeling factor, putati...   469   e-130
gi|17569817|ref|NP_510140.1| CHromoDomain protein, DNA binding h...   468   e-130
gi|25412286|pir||B84645 hypothetical protein At2g25170 [imported...   467   e-129
gi|7512678|pir||T17269 hypothetical protein DKFZp434N231.1 - hum...   465   e-129
gi|47227437|emb|CAG04585.1| unnamed protein product [Tetraodon n...   463   e-128
gi|12853471|dbj|BAB29753.1| unnamed protein product [Mus musculus]    460   e-127
gi|39593093|emb|CAE64562.1| Hypothetical protein CBG09312 [Caeno...   457   e-127
gi|34328020|dbj|BAB13390.3| KIAA1564 protein [Homo sapiens]           452   e-125
gi|23396512|sp|Q9HCK8|CHD8_HUMAN Chromodomain-helicase-DNA-bindi...   452   e-125
gi|41149958|ref|XP_370738.1| helicase with SNF2 domain 1 [Homo s...   452   e-125
gi|49355790|ref|NP_079410.3| chromodomain helicase DNA binding p...   450   e-124
gi|38089687|ref|XP_284439.2| RIKEN cDNA 1810014J18 [Mus musculus]     449   e-124
gi|42658959|ref|XP_098762.6| KIAA1416 protein [Homo sapiens]          449   e-124
gi|23396522|sp|Q9P2D1|CHD7_HUMAN Chromodomain-helicase-DNA-bindi...   449   e-124
gi|34866132|ref|XP_232671.2| similar to Probable chromodomain-he...   448   e-124
gi|19421557|gb|AAK56405.1| chromodomain helicase DNA binding pro...   447   e-124
gi|23396493|sp|Q8TD26|CHD6_HUMAN Chromodomain-helicase-DNA-bindi...   447   e-124
gi|29244924|ref|NP_115597.3| chromodomain helicase DNA binding p...   447   e-124
gi|49476336|gb|AAT66509.1| KISH2; hKISH2; Kismet homolog 2 [Homo...   447   e-123
gi|47228067|emb|CAF97696.1| unnamed protein product [Tetraodon n...   445   e-123
gi|50738005|ref|XP_419222.1| PREDICTED: similar to Probable chro...   443   e-122
gi|47215569|emb|CAG10740.1| unnamed protein product [Tetraodon n...   442   e-122
gi|34533780|dbj|BAC86802.1| unnamed protein product [Homo sapiens]    439   e-121
gi|38078060|ref|XP_149413.3| RIKEN cDNA A730019I05 gene [Mus mus...   436   e-120
gi|39589511|emb|CAE74540.1| Hypothetical protein CBG22297 [Caeno...   432   e-119
gi|15241584|ref|NP_199293.1| chromodomain-helicase-DNA-binding f...   431   e-119
gi|33146539|dbj|BAC79716.1| chromodomain helicase DNA binding pr...   431   e-118
gi|34901830|ref|NP_912261.1| putative zinc-finger helicase [Oryz...   431   e-118
gi|17508849|ref|NP_491426.1| chromodomain-helicase-DNA-binding p...   430   e-118
gi|34327952|dbj|BAA20767.2| KIAA0308 [Homo sapiens]                   428   e-118
gi|34851357|ref|XP_226325.2| similar to Probable chromodomain-he...   426   e-117
gi|46227356|gb|EAK88291.1| CHD3 ortholog with 2x chromodomains p...   425   e-117
gi|6437558|gb|AAF08585.1| putative ATPase (ISW2-like) [Arabidops...   421   e-115
gi|20259462|gb|AAM13851.1| putative ATPase (ISW2) [Arabidopsis t...   419   e-115
gi|22330875|ref|NP_187291.2| DNA-dependent ATPase, putative [Ara...   419   e-115
gi|30686918|ref|NP_850847.1| DNA-dependent ATPase, putative [Ara...   417   e-114
gi|30686915|ref|NP_568365.2| DNA-dependent ATPase, putative [Ara...   417   e-114
gi|12083522|gb|AAG48831.1| similar to Arabidopsis thaliana putat...   412   e-113
gi|2134376|pir||I50372 hypothetical protein 2 delta-EF1 region -...   406   e-111
gi|34914698|ref|NP_918696.1| putative DNA-dependent ATPase [Oryz...   405   e-111
gi|50746279|ref|XP_420423.1| PREDICTED: similar to hSNF2H [Gallu...   405   e-111
gi|49899007|gb|AAH76715.1| ISWI protein [Xenopus laevis]              403   e-110
gi|2967452|dbj|BAA25173.1| hSNF2H [Homo sapiens] >gnl|BL_ORD_ID|...   402   e-110
gi|21071058|ref|NP_003592.2| SWI/SNF-related matrix-associated a...   402   e-110
gi|14028669|gb|AAK52454.1| DNA-dependent ATPase SNF2H [Mus muscu...   402   e-110
gi|34851567|ref|XP_226380.2| similar to ATP-dependent chromatin ...   401   e-110
gi|40254124|ref|NP_444354.2| SWI/SNF related, matrix associated,...   401   e-110
gi|11035016|gb|AAG01537.2| imitation switch ISWI [Xenopus laevis]     400   e-109
gi|26348885|dbj|BAC38082.1| unnamed protein product [Mus musculus]    394   e-108
gi|50745990|ref|XP_420328.1| PREDICTED: similar to SWI/SNF-relat...   392   e-107
gi|34783716|gb|AAH57115.1| Smarca1 protein [Mus musculus]             392   e-107
gi|14028667|gb|AAK52453.1| DNA-dependent ATPase SNF2L [Mus muscu...   392   e-107
gi|30578398|ref|NP_444353.2| SWI/SNF related, matrix associated,...   391   e-107
gi|6324879|ref|NP_014948.1| has strong homology to Drosophila IS...   390   e-106
gi|49096640|ref|XP_409780.1| hypothetical protein AN5643.2 [Aspe...   390   e-106
gi|46437717|gb|EAK97058.1| hypothetical protein CaO19.7401 [Cand...   390   e-106
gi|11359727|pir||T18404 chromatin remodelling complex protein SN...   389   e-106
gi|23508249|ref|NP_700918.1| PfSNF2L [Plasmodium falciparum 3D7]...   389   e-106
gi|34881588|ref|XP_229124.2| similar to SWI/SNF-related matrix-a...   389   e-106
gi|50312307|ref|XP_456186.1| unnamed protein product [Kluyveromy...   389   e-106
gi|45198479|ref|NP_985508.1| AFL040Wp [Eremothecium gossypii] >g...   388   e-106
gi|50285639|ref|XP_445248.1| unnamed protein product [Candida gl...   387   e-105
gi|23489925|gb|EAA21818.1| SNF2 family N-terminal domain, putati...   386   e-105
gi|626929|pir||S46122 SNF2 protein homolog YBR245c - yeast (Sacc...   385   e-105
gi|6319722|ref|NP_009804.1| has strong homology to Drosophila IS...   385   e-105
gi|49071866|ref|XP_400222.1| hypothetical protein UM02607.1 [Ust...   384   e-104
gi|50254945|gb|EAL17685.1| hypothetical protein CNBL2000 [Crypto...   384   e-104
gi|45199055|ref|NP_986084.1| AFR537Wp [Eremothecium gossypii] >g...   384   e-104
gi|38102523|gb|EAA49354.1| hypothetical protein MG01012.4 [Magna...   383   e-104
gi|47217344|emb|CAG11049.1| unnamed protein product [Tetraodon n...   383   e-104
gi|46137507|ref|XP_390445.1| conserved hypothetical protein [Gib...   383   e-104
gi|32405162|ref|XP_323194.1| hypothetical protein [Neurospora cr...   383   e-104
gi|134584|sp|P28370|SN21_HUMAN Possible global transcription act...   383   e-104
gi|479805|pir||S35458 SNF2 protein homolog - human (fragment) >g...   382   e-104
gi|21071044|ref|NP_003060.2| SWI/SNF-related matrix-associated a...   382   e-104
gi|50290467|ref|XP_447665.1| unnamed protein product [Candida gl...   382   e-104
gi|6322065|ref|NP_012140.1| helicase related protein, snf2 homol...   382   e-104
gi|17737463|ref|NP_523719.1| CG8625-PA [Drosophila melanogaster]...   381   e-104
gi|20151803|gb|AAM11261.1| RH13158p [Drosophila melanogaster]         381   e-104
gi|50549971|ref|XP_502458.1| hypothetical protein [Yarrowia lipo...   381   e-104
gi|46125857|ref|XP_387482.1| hypothetical protein FG07306.1 [Gib...   380   e-103
gi|50547703|ref|XP_501321.1| hypothetical protein [Yarrowia lipo...   380   e-103
gi|50310725|ref|XP_455384.1| unnamed protein product [Kluyveromy...   380   e-103
gi|50551961|ref|XP_503455.1| hypothetical protein [Yarrowia lipo...   380   e-103
gi|172764|gb|AAA35120.1| STH1 protein                                 379   e-103
gi|50551421|ref|XP_503184.1| hypothetical protein [Yarrowia lipo...   379   e-103
gi|38079103|ref|XP_110500.2| similar to ATP-dependent chromatin ...   379   e-103
gi|31204937|ref|XP_311417.1| ENSANGP00000016886 [Anopheles gambi...   378   e-103
gi|30687235|ref|NP_197432.2| homeotic gene regulator, putative [...   378   e-103
gi|49088566|ref|XP_406093.1| hypothetical protein AN1956.2 [Aspe...   378   e-103
gi|50288627|ref|XP_446743.1| unnamed protein product [Candida gl...   378   e-103
gi|50420017|ref|XP_458541.1| unnamed protein product [Debaryomyc...   377   e-102
gi|45190977|ref|NP_985231.1| AER375Cp [Eremothecium gossypii] >g...   376   e-102
gi|49089400|ref|XP_406415.1| hypothetical protein AN2278.2 [Aspe...   375   e-102
gi|25144179|ref|NP_498468.2| yeast Imitation SWI homolog (116.7 ...   375   e-102
gi|1078857|pir||S44645 hypothetical protein F37A4.8 - Caenorhabd...   375   e-102
gi|46137317|ref|XP_390350.1| hypothetical protein FG10174.1 [Gib...   375   e-102
gi|15230608|ref|NP_187252.1| homeotic gene regulator, putative [...   375   e-102
gi|39583648|emb|CAE63752.1| Hypothetical protein CBG08287 [Caeno...   374   e-101
gi|39594011|emb|CAE70121.1| Hypothetical protein CBG16574 [Caeno...   373   e-101
gi|50426167|ref|XP_461680.1| unnamed protein product [Debaryomyc...   371   e-101
gi|19075044|ref|NP_586645.1| similarity to CHROMODOMAIN HELICASE...   371   e-101
gi|50310529|ref|XP_455284.1| unnamed protein product [Kluyveromy...   371   e-101
gi|32398963|emb|CAD98428.1| SNF2 helicase, possible [Cryptospori...   370   e-100
gi|6324864|ref|NP_014933.1| involved in the coordinate regulatio...   369   e-100
gi|228213|prf||1718318A GAM1 gene                                     368   e-100
gi|46435400|gb|EAK94782.1| hypothetical protein CaO19.4437 [Cand...   368   e-100
gi|50753684|ref|XP_414088.1| PREDICTED: similar to hypothetical ...   368   e-100
gi|10434055|dbj|BAB14112.1| unnamed protein product [Homo sapiens]    367   1e-99
gi|45199080|ref|NP_986109.1| AFR562Cp [Eremothecium gossypii] >g...   366   2e-99
gi|19115773|ref|NP_594861.1| putative transcriptional regulator ...   366   2e-99
gi|32411725|ref|XP_326343.1| hypothetical protein [Neurospora cr...   366   3e-99
gi|49069018|ref|XP_398798.1| hypothetical protein UM01183.1 [Ust...   365   5e-99
gi|283699|pir||A42091 transcription activator SNF2/SWI2 homolog ...   365   5e-99
gi|17985967|ref|NP_536746.1| CG5942-PA [Drosophila melanogaster]...   365   5e-99
gi|24664907|ref|NP_730088.1| CG5942-PD [Drosophila melanogaster]...   365   5e-99
gi|50294289|ref|XP_449556.1| unnamed protein product [Candida gl...   365   5e-99
gi|17539642|ref|NP_502082.1| phasmid Socket Absent PSA-4, homolo...   364   9e-99
gi|46226948|gb|EAK87914.1| chromodomain-helicase-DNA-binding'mul...   363   2e-98
gi|46444408|gb|EAL03683.1| hypothetical protein CaO19.9102 [Cand...   363   2e-98
gi|46444555|gb|EAL03829.1| hypothetical protein CaO19.1526 [Cand...   363   2e-98
gi|38566825|emb|CAE76132.1| related to helicase-DNA-binding prot...   363   2e-98
gi|32412838|ref|XP_326899.1| hypothetical protein [Neurospora cr...   363   2e-98
gi|39593716|emb|CAE62008.1| Hypothetical protein CBG06016 [Caeno...   363   3e-98
gi|34559250|gb|AAQ75381.1| global transcription activator Snf2p ...   362   4e-98
gi|31205071|ref|XP_311484.1| ENSANGP00000013716 [Anopheles gambi...   362   6e-98
gi|50303907|ref|XP_451901.1| unnamed protein product [Kluyveromy...   361   1e-97
gi|46228591|gb|EAK89461.1| SNF2L ortholog with a SWI/SNF2 like A...   361   1e-97
gi|38110738|gb|EAA56417.1| hypothetical protein MG06388.4 [Magna...   359   3e-97
gi|29247792|gb|EAA39344.1| GLP_177_26570_34507 [Giardia lamblia ...   357   1e-96
gi|46397098|sp|O94421|YQGE_SCHPO Hypothetical helicase C1620.14c...   357   1e-96
gi|31322808|gb|AAP31846.1| Brg1p [Tetrahymena thermophila]            357   2e-96
gi|33944265|ref|XP_340280.1| transcription activator, putative [...   355   4e-96
gi|45384078|ref|NP_990470.1| BRM protein [Gallus gallus] >gnl|BL...   354   9e-96
gi|48255900|ref|NP_003061.3| SWI/SNF-related matrix-associated a...   354   1e-95
gi|33440456|gb|AAH56199.1| Smarca2 protein [Mus musculus]             354   1e-95
gi|1711406|sp|P51531|SN22_HUMAN Possible global transcription ac...   354   1e-95
gi|49523317|gb|AAH75641.1| Smarca2 protein [Mus musculus]             354   1e-95
gi|34862108|ref|XP_342040.1| similar to SWI/SNF-related matrix-a...   354   1e-95
gi|50425079|ref|XP_461131.1| unnamed protein product [Debaryomyc...   354   1e-95
gi|48255898|ref|NP_620614.2| SWI/SNF-related matrix-associated a...   354   1e-95
gi|7022541|dbj|BAA91637.1| unnamed protein product [Homo sapiens]     353   2e-95
gi|12654665|gb|AAH01171.1| Unknown (protein for IMAGE:3355762) [...   353   2e-95
gi|42734377|ref|NP_004275.2| chromodomain helicase DNA binding p...   353   2e-95
gi|28175792|gb|AAH43501.1| Similar to RIKEN cDNA 4432404A22 gene...   353   2e-95
gi|46441784|gb|EAL01078.1| hypothetical protein CaO19.239 [Candi...   353   2e-95
gi|17551114|ref|NP_508736.1| brahma (XE918) [Caenorhabditis eleg...   353   2e-95
gi|7497824|pir||T28937 hypothetical protein C52B9.8 - Caenorhabd...   353   2e-95
gi|10946129|gb|AAG24790.1| SMARCA4 isoform 2 [Homo sapiens]           352   4e-95
gi|45384232|ref|NP_990390.1| BRG1 protein [Gallus gallus] >gnl|B...   352   4e-95
gi|34860432|ref|XP_343359.1| SWI/SNF related, matrix associated,...   352   4e-95
gi|39930329|ref|NP_035547.1| SWI/SNF related, matrix associated,...   352   4e-95
gi|2143481|pir||I53078 homeotic gene regulator - mouse (fragment...   352   4e-95
gi|1711407|sp|P51532|SN24_HUMAN Possible global transcription ac...   352   4e-95
gi|21071056|ref|NP_003063.2| SWI/SNF-related matrix-associated a...   352   4e-95
gi|22095171|emb|CAD43278.1| brahma-related protein 1 [Rattus nor...   352   4e-95
gi|50729410|ref|XP_416503.1| PREDICTED: similar to Chromodomain ...   352   4e-95
gi|49616741|gb|AAT67217.1| SWI/SNF-related matrix-associated act...   352   4e-95
gi|35505451|gb|AAH57567.1| Chromodomain helicase DNA binding pro...   352   4e-95
gi|34907414|ref|NP_915054.1| putative chromodomain-helicase-DNA-...   352   5e-95
gi|13386044|ref|NP_080815.1| chromodomain helicase DNA binding p...   351   8e-95
gi|2136177|pir||S45251 SNF2alpha protein - human >gnl|BL_ORD_ID|...   351   8e-95
gi|47226612|emb|CAG07771.1| unnamed protein product [Tetraodon n...   350   1e-94
gi|38102212|gb|EAA49078.1| hypothetical protein MG00736.4 [Magna...   350   1e-94
gi|19112177|ref|NP_595385.1| helicase C protein with SNF2 domain...   350   2e-94
gi|46227736|gb|EAK88656.1| SWI/SNF related putative transcriptio...   350   2e-94
gi|21071046|ref|NP_620604.1| SWI/SNF-related matrix-associated a...   348   5e-94
gi|19074741|ref|NP_586247.1| similarity to THE ATPase COMPONENT ...   348   9e-94
gi|47086607|ref|NP_997881.1| phasmid Socket Absent PSA-4, homolo...   347   1e-93
gi|15240074|ref|NP_201476.1| SNF2 domain-containing protein / he...   347   2e-93
gi|50399992|gb|AAT76380.1| putative DNA-dependent ATPase [Oryza ...   347   2e-93
gi|31745178|ref|NP_853634.1| SWI/SNF related, matrix associated,...   345   6e-93
gi|738309|prf||1924378A nucler protein GRB1                           343   3e-92
gi|481644|pir||S39059 protein BRG1 - human                            343   3e-92
gi|33086941|gb|AAP92713.1| Swi2/Snf2-related protein DDM1; decre...   342   4e-92
gi|47213811|emb|CAF92584.1| unnamed protein product [Tetraodon n...   340   1e-91
gi|41053461|ref|NP_956607.1| similar to chromodomain helicase DN...   340   1e-91
gi|50729550|ref|XP_416560.1| PREDICTED: similar to chromodomain ...   340   1e-91
gi|18463957|gb|AAL73042.1| chromatin complex subunit A101 [Zea m...   337   2e-90
gi|50255395|gb|EAL18130.1| hypothetical protein CNBK1510 [Crypto...   336   3e-90
gi|50753138|ref|XP_413879.1| PREDICTED: similar to Chromodomain-...   333   2e-89
gi|17946168|gb|AAL49125.1| RE55932p [Drosophila melanogaster]         330   2e-88
gi|39597865|emb|CAE68557.1| Hypothetical protein CBG14390 [Caeno...   329   3e-88
gi|46228555|gb|EAK89425.1| brahma like protein with a HSA domain...   328   9e-88
gi|50759145|ref|XP_417537.1| PREDICTED: similar to chromodomain ...   322   4e-86
gi|20197603|gb|AAD29835.2| putative SNF2 subfamily transcription...   319   3e-85
gi|42569923|ref|NP_182025.2| transcription regulatory protein SN...   318   6e-85
gi|30683830|ref|NP_850116.1| chromatin remodeling protein, putat...   318   7e-85
gi|30683833|ref|NP_850117.1| chromatin remodeling protein, putat...   318   7e-85
gi|13603721|gb|AAK31908.1| putative chromatin remodeling protein...   315   8e-84
gi|25407972|pir||A84683 probable SNF2 subfamily transcription re...   313   3e-83
gi|42571231|ref|NP_973689.1| transcription regulatory protein SN...   313   3e-83
gi|50414862|gb|AAH77794.1| Unknown (protein for IMAGE:5154772) [...   312   4e-83
gi|25408914|pir||B84885 probable transcription activator [import...   312   5e-83
gi|26383564|dbj|BAC25543.1| unnamed protein product [Mus musculus]    312   1e-82
gi|21914927|ref|NP_060533.2| helicase, lymphoid-specific; prolif...   311   1e-82
gi|49257014|dbj|BAD24805.1| lymphoid specific helicase variant10...   311   1e-82
gi|23485366|gb|EAA20388.1| Arabidopsis thaliana BRAHMA ortholog-...   310   2e-82
gi|26378644|dbj|BAB28757.2| unnamed protein product [Mus musculus]    310   2e-82
gi|12232371|ref|NP_032260.2| helicase, lymphoid specific; prolif...   310   2e-82
gi|31874139|emb|CAD97978.1| hypothetical protein [Homo sapiens]       309   4e-82
gi|34860336|ref|XP_230814.2| similar to chromodomain helicase DN...   309   4e-82
gi|48108143|ref|XP_396195.1| similar to ENSANGP00000016886 [Apis...   306   3e-81
gi|50749410|ref|XP_421626.1| PREDICTED: similar to helicase, lym...   304   1e-80
gi|47209419|emb|CAF93109.1| unnamed protein product [Tetraodon n...   302   5e-80
gi|3320448|gb|AAC41378.1| chromo-helicase-DNA-binding protein [S...   301   9e-80
gi|42571243|ref|NP_973695.1| transcription regulatory protein SN...   301   1e-79
gi|47221566|emb|CAF97831.1| unnamed protein product [Tetraodon n...   301   1e-79
gi|45357049|gb|AAS58478.1| SNF2P [Hordeum vulgare subsp. vulgare]     301   1e-79
gi|45357056|gb|AAS58484.1| SNF2P [Triticum monococcum]                300   2e-79
gi|23193481|gb|AAN14535.1| SNF2P [Hordeum vulgare]                    299   5e-79
gi|42569958|ref|NP_182126.2| transcription regulatory protein SN...   298   6e-79
gi|25408956|pir||G84897 hypothetical protein At2g46020 [imported...   298   8e-79
gi|49022903|dbj|BAC41410.3| mKIAA0308 protein [Mus musculus]          298   1e-78
gi|23193483|gb|AAN14536.1| SNF2P [Oryza sativa (japonica cultiva...   297   2e-78
gi|2137490|pir||JC4666 lymphocyte specific helicase - mouse           296   4e-78
gi|4056412|gb|AAC97986.1| BRG-1-HUMAN  [AA 812-1440]; nuclear pr...   291   1e-76
gi|4056413|gb|AAC97987.1| SN24_HUMAN; nuclear protein GRB1; home...   291   1e-76
gi|5738867|emb|CAB52874.1| SPCC830.01c [Schizosaccharomyces pombe]    290   2e-76
gi|14042443|dbj|BAB55248.1| unnamed protein product [Homo sapiens]    286   4e-75
gi|31204935|ref|XP_311416.1| ENSANGP00000016881 [Anopheles gambi...   279   5e-73
gi|29248111|gb|EAA39653.1| GLP_217_10600_6770 [Giardia lamblia A...   271   1e-70
gi|45190351|ref|NP_984605.1| AEL256Cp [Eremothecium gossypii] >g...   266   3e-69
gi|50289211|ref|XP_447036.1| unnamed protein product [Candida gl...   265   7e-69
gi|38079010|ref|XP_110546.2| similar to ATP-dependent chromatin ...   258   1e-66
gi|20072056|gb|AAH26672.1| Smarca4 protein [Mus musculus]             258   1e-66
gi|26333335|dbj|BAC30385.1| unnamed protein product [Mus musculus]    256   3e-66
gi|38088971|ref|XP_356054.1| similar to Chromodomain-helicase-DN...   254   1e-65
gi|49257012|dbj|BAD24804.1| lymphoid specific helicase variant9 ...   253   2e-65
gi|47209275|emb|CAF89705.1| unnamed protein product [Tetraodon n...   253   4e-65
gi|50758555|ref|XP_417313.1| PREDICTED: similar to chromodomain ...   251   1e-64
gi|16805045|ref|NP_473074.1| DNA helicase, putative [Plasmodium ...   248   1e-63
gi|48858203|ref|ZP_00312165.1| COG0553: Superfamily II DNA/RNA h...   246   4e-63
gi|26339542|dbj|BAC33442.1| unnamed protein product [Mus musculus]    244   1e-62
gi|15224228|ref|NP_179466.1| SNF2 domain-containing protein / he...   242   7e-62
gi|34894036|ref|NP_908343.1| putative DNA repair and recombinati...   241   1e-61
gi|50309923|ref|XP_454975.1| unnamed protein product [Kluyveromy...   240   3e-61
gi|50548883|ref|XP_501912.1| hypothetical protein [Yarrowia lipo...   239   3e-61
gi|50422435|ref|XP_459783.1| unnamed protein product [Debaryomyc...   237   2e-60
gi|23111644|ref|ZP_00097250.1| COG0553: Superfamily II DNA/RNA h...   236   5e-60
gi|19075591|ref|NP_588091.1| DNA repair and recombination protei...   234   2e-59
gi|45190542|ref|NP_984796.1| AEL065Cp [Eremothecium gossypii] >g...   233   2e-59
gi|50792784|ref|XP_423617.1| PREDICTED: similar to Chromodomain-...   233   4e-59
gi|49104376|ref|XP_411240.1| hypothetical protein AN7103.2 [Aspe...   232   5e-59
gi|16800753|ref|NP_471021.1| similar to SNF2-type helicase [List...   231   2e-58
gi|6322495|ref|NP_012569.1| Protein involved in transcription-co...   230   3e-58
gi|15618758|ref|NP_225044.1| SWI/SNF family helicase_2 [Chlamydo...   229   3e-58
gi|550429|emb|CAA57290.1| RAD26 [Saccharomyces cerevisiae]            229   3e-58
gi|50427841|ref|XP_462533.1| unnamed protein product [Debaryomyc...   229   3e-58
gi|50289791|ref|XP_447327.1| unnamed protein product [Candida gl...   229   4e-58
gi|10433595|dbj|BAB13994.1| unnamed protein product [Homo sapiens]    229   6e-58
gi|47096999|ref|ZP_00234573.1| helicase, Snf2 family [Listeria m...   229   6e-58
gi|16803684|ref|NP_465169.1| similar to SNF2-type helicase [List...   228   8e-58
gi|15836382|ref|NP_300906.1| SWI/SNF family helicase_2 [Chlamydo...   228   8e-58
gi|20521890|dbj|BAA92573.2| KIAA1335 protein [Homo sapiens]           228   1e-57
gi|46255694|gb|AAH05038.1| Unknown (protein for IMAGE:3618220) [...   226   5e-57
gi|30023277|ref|NP_834908.1| SWF/SNF family helicase [Bacillus c...   226   5e-57
gi|19577362|emb|CAD28443.1| possible swi2/snf2-like protein [Asp...   225   8e-57
gi|42820703|emb|CAF32016.1| possible swi2/snf2-like protein [Asp...   225   8e-57
gi|6330933|dbj|BAA86573.1| KIAA1259 protein [Homo sapiens]            225   8e-57
gi|33469139|ref|NP_115572.2| yeast INO80-like protein [Homo sapi...   225   8e-57
gi|47093680|ref|ZP_00231434.1| helicase, Snf2 family [Listeria m...   224   1e-56
gi|46907873|ref|YP_014262.1| helicase, Snf2 family [Listeria mon...   224   1e-56
gi|46435782|gb|EAK95157.1| hypothetical protein CaO19.607 [Candi...   224   1e-56
gi|46435735|gb|EAK95111.1| hypothetical protein CaO19.8240 [Cand...   224   1e-56
gi|23100530|ref|NP_693997.1| helicase [Oceanobacillus iheyensis ...   224   2e-56
gi|46431413|gb|EAK90982.1| hypothetical protein CaO19.9302 [Cand...   223   2e-56
gi|46110288|ref|XP_382202.1| hypothetical protein FG02026.1 [Gib...   223   3e-56
gi|50748161|ref|XP_421134.1| PREDICTED: similar to hypothetical ...   222   5e-56
gi|38181513|gb|AAH61495.1| Unknown (protein for MGC:70257) [Mus ...   222   5e-56
gi|15595996|ref|NP_249490.1| probable helicase [Pseudomonas aeru...   222   5e-56
gi|49481223|ref|YP_039235.1| SNF2 family helicase [Bacillus thur...   222   5e-56
gi|42784409|ref|NP_981656.1| helicase, putative [Bacillus cereus...   222   5e-56
gi|38109213|gb|EAA55119.1| hypothetical protein MG06776.4 [Magna...   222   5e-56
gi|38075621|ref|XP_355376.1| RIKEN cDNA 4632409L19 [Mus musculus]     222   5e-56
gi|37590263|gb|AAH59235.1| 4632409L19Rik protein [Mus musculus]       222   5e-56
gi|29840673|ref|NP_829779.1| helicase, Snf2 family [Chlamydophil...   222   7e-56
gi|15605441|ref|NP_220227.1| SWF/SNF family helicase [Chlamydia ...   222   7e-56
gi|46111317|ref|XP_382716.1| hypothetical protein FG02540.1 [Gib...   221   9e-56
gi|15834706|ref|NP_296465.1| helicase, Snf2 family [Chlamydia mu...   221   1e-55
gi|26347721|dbj|BAC37509.1| unnamed protein product [Mus musculus]    221   1e-55
gi|21397710|ref|NP_653695.1| SNF2_N, SNF2 and others N-terminal ...   221   2e-55
gi|47569742|ref|ZP_00240415.1| helicase, SNF2/RAD54 family [Baci...   221   2e-55
gi|49068154|ref|XP_398366.1| hypothetical protein UM00751.1 [Ust...   221   2e-55
gi|49089418|ref|XP_406422.1| hypothetical protein AN2285.2 [Aspe...   221   2e-55
gi|50552610|ref|XP_503715.1| hypothetical protein [Yarrowia lipo...   221   2e-55
gi|50308703|ref|XP_454355.1| unnamed protein product [Kluyveromy...   219   4e-55
gi|46447008|ref|YP_008373.1| conserved hypothetical protein [Par...   219   4e-55
gi|37360298|dbj|BAC98127.1| mKIAA1259 protein [Mus musculus]          219   4e-55
gi|50286955|ref|XP_445907.1| unnamed protein product [Candida gl...   219   6e-55
gi|46446009|ref|YP_007374.1| putative rapA, a bacterial member o...   218   8e-55
gi|47219154|emb|CAG01817.1| unnamed protein product [Tetraodon n...   218   8e-55
gi|50258657|gb|EAL21342.1| hypothetical protein CNBD0390 [Crypto...   218   8e-55
gi|46228613|gb|EAK89483.1| Swr1p like SWI/SNF2 family ATpase wit...   218   1e-54
gi|25011706|ref|NP_736101.1| Unknown [Streptococcus agalactiae N...   218   1e-54
gi|22537758|ref|NP_688609.1| Snf2 family protein [Streptococcus ...   218   1e-54
gi|46580490|ref|YP_011298.1| Snf2 family protein [Desulfovibrio ...   218   1e-54
gi|11994423|dbj|BAB02425.1| helicase-like protein [Arabidopsis t...   218   1e-54
gi|46447118|ref|YP_008483.1| conserved hypothetical protein [Par...   218   1e-54
gi|23099744|ref|NP_693210.1| helicase [Oceanobacillus iheyensis ...   218   1e-54
gi|42564102|ref|NP_187887.3| SNF2 domain-containing protein / he...   218   1e-54
gi|17556709|ref|NP_499653.1| prion-like Q/N-rich domain protein ...   217   2e-54
gi|50470843|emb|CAC35851.2| Hypothetical protein Y111B2A.22 [Cae...   217   2e-54
gi|46121269|ref|XP_385189.1| hypothetical protein FG05013.1 [Gib...   217   2e-54
gi|45451721|gb|AAS65429.1| Swi/Snf family ATPase [Caenorhabditis...   217   2e-54
gi|41052809|dbj|BAD07677.1| putative photoperiod independent ear...   217   2e-54
gi|39585279|emb|CAE57522.1| Hypothetical protein CBG00497 [Caeno...   216   3e-54
gi|6321289|ref|NP_011365.1| ATPase that forms a large complex, c...   216   4e-54
gi|23474884|ref|ZP_00130175.1| COG0553: Superfamily II DNA/RNA h...   216   4e-54
gi|45201475|ref|NP_987045.1| AGR379Wp [Eremothecium gossypii] >g...   216   4e-54
gi|34526499|dbj|BAC85127.1| FLJ00266 protein [Homo sapiens]           216   5e-54
gi|49118820|gb|AAH73289.1| Unknown (protein for MGC:80667) [Xeno...   214   1e-53
gi|31209871|ref|XP_313902.1| ENSANGP00000003358 [Anopheles gambi...   214   1e-53
gi|24380105|ref|NP_722060.1| putative SNF helicase [Streptococcu...   214   1e-53
gi|46189143|ref|ZP_00124369.2| COG0553: Superfamily II DNA/RNA h...   214   1e-53
gi|12044868|ref|NP_072678.1| ATP-dependent RNA helicase, putativ...   214   2e-53
gi|24648168|ref|NP_732413.1| CG31212-PA [Drosophila melanogaster...   213   3e-53
gi|17862908|gb|AAL39931.1| SD02886p [Drosophila melanogaster]         213   3e-53
gi|5730067|ref|NP_006653.1| Snf2-related CBP activator protein [...   213   4e-53
gi|34327954|dbj|BAA20768.2| KIAA0309 [Homo sapiens]                   213   4e-53
gi|34535199|dbj|BAC87237.1| unnamed protein product [Homo sapiens]    213   4e-53
gi|34859306|ref|XP_341933.1| similar to Snf2-related CBP activat...   213   4e-53
gi|28869303|ref|NP_791922.1| helicase/SNF2 family domain protein...   211   1e-52
gi|7485374|pir||T06312 hypothetical protein F11C18.100 - Arabido...   211   1e-52
gi|49086192|ref|XP_405161.1| hypothetical protein AN1024.2 [Aspe...   211   2e-52
gi|48855575|ref|ZP_00309734.1| COG0553: Superfamily II DNA/RNA h...   210   2e-52
gi|47213833|emb|CAG00637.1| unnamed protein product [Tetraodon n...   210   2e-52
gi|32475836|ref|NP_868830.1| probable swi/snf family helicase 2 ...   209   5e-52
gi|34495520|ref|NP_899735.1| probable SWI/SNF family helicase [C...   209   5e-52
gi|19704495|ref|NP_604057.1| SWF/SNF family helicase [Fusobacter...   209   6e-52
gi|23105623|ref|ZP_00092079.1| COG0553: Superfamily II DNA/RNA h...   207   2e-51
gi|30840950|gb|AAL29689.1| Snf2-related chromatin remodeling fac...   207   2e-51
gi|45190309|ref|NP_984563.1| AEL297Wp [Eremothecium gossypii] >g...   206   3e-51
gi|38086925|ref|XP_355914.1| similar to Chromodomain-helicase-DN...   206   4e-51
gi|24656962|ref|NP_726065.1| CG9696-PD [Drosophila melanogaster]...   205   7e-51
gi|42780946|ref|NP_978193.1| helicase, putative [Bacillus cereus...   205   7e-51
gi|8953897|gb|AAF82185.1| helicase DOMINO A [Drosophila melanoga...   205   7e-51
gi|14090511|gb|AAK53539.1| DOMINO B [Drosophila melanogaster]         205   7e-51
gi|28573600|ref|NP_788424.1| CG9696-PE [Drosophila melanogaster]...   205   7e-51
gi|16198155|gb|AAL13882.1| LD35434p [Drosophila melanogaster]         205   7e-51
gi|24656966|ref|NP_524833.2| CG9696-PA [Drosophila melanogaster]...   205   7e-51
gi|15901369|ref|NP_345973.1| Snf2 family protein [Streptococcus ...   205   7e-51
gi|19173311|ref|NP_597114.1| GLOBAL TRANSCRIPTIONAL ACTIVATOR (S...   205   9e-51
gi|28211487|ref|NP_782431.1| SWF/SNF family helicase [Clostridiu...   204   2e-50
gi|30694618|ref|NP_191289.2| transcriptional activator, putative...   204   2e-50
gi|11357327|pir||T45808 helicase-like protein - Arabidopsis thal...   204   2e-50
gi|21224583|ref|NP_630362.1| putative helicase [Streptomyces coe...   204   2e-50
gi|30261851|ref|NP_844228.1| helicase, putative [Bacillus anthra...   204   2e-50
gi|49481102|ref|YP_035985.1| helicase, SWF/SNF family [Bacillus ...   204   2e-50
gi|15896682|ref|NP_350031.1| DNA/RNA helicase, SNF2 [Clostridium...   204   2e-50
gi|30584439|gb|AAP36472.1| Homo sapiens chromodomain helicase DN...   204   2e-50
gi|21594300|gb|AAH20810.1| CHD2 protein [Homo sapiens]                204   2e-50
gi|13938416|gb|AAH07347.1| CHD2 protein [Homo sapiens] >gnl|BL_O...   204   2e-50
gi|29828520|ref|NP_823154.1| putative SNF2/RAD54 family helicase...   203   3e-50
gi|30019888|ref|NP_831519.1| SWF/SNF family helicase [Bacillus c...   203   3e-50
gi|29826907|ref|NP_821541.1| putative SNF2/RAD54 family helicase...   202   4e-50
gi|47565536|ref|ZP_00236577.1| Snf2 family protein [Bacillus cer...   202   4e-50
gi|38108120|gb|EAA54198.1| hypothetical protein MG02183.4 [Magna...   202   4e-50
gi|1769947|emb|CAA67095.1| SNF [Bacillus cereus]                      202   6e-50
gi|46914265|emb|CAG21045.1| hypothetical protein [Photobacterium...   202   6e-50
gi|31216396|ref|XP_316223.1| ENSANGP00000017802 [Anopheles gambi...   202   8e-50
gi|46443600|gb|EAL02881.1| hypothetical protein CaO19.9288 [Cand...   201   1e-49
gi|49075344|ref|XP_401744.1| hypothetical protein UM04129.1 [Ust...   201   1e-49
gi|42742173|ref|NP_116696.2| Hypothetical ORF; Yfr038wp [Sacchar...   201   2e-49
gi|1176015|sp|P43610|YFK8_YEAST Hypothetical 88.7 kDa helicase i...   201   2e-49
gi|50553882|ref|XP_504352.1| hypothetical protein [Yarrowia lipo...   200   2e-49
gi|15903418|ref|NP_358968.1| SWF/SNF family ATP-dependent RNA he...   200   2e-49
gi|15674024|ref|NP_268199.1| SWI/SNF family helicase [Lactococcu...   199   4e-49
gi|33864422|ref|NP_895982.1| SNF2 related domain:DEAD/DEAH box h...   199   4e-49
gi|31544906|ref|NP_853484.1| HepA/SNF2 [Mycoplasma gallisepticum...   199   4e-49
gi|46122747|ref|XP_385927.1| hypothetical protein FG05751.1 [Gib...   199   4e-49
gi|50258841|gb|EAL21526.1| hypothetical protein CNBD2200 [Crypto...   199   5e-49
gi|48824514|ref|ZP_00285879.1| COG0553: Superfamily II DNA/RNA h...   199   5e-49
gi|34857610|ref|XP_230473.2| similar to KIAA1259 protein [Rattus...   199   5e-49
gi|37521987|ref|NP_925364.1| probable helicase [Gloeobacter viol...   199   6e-49
gi|33239499|ref|NP_874441.1| Superfamily II DNA/RNA helicases, S...   199   6e-49
gi|17568089|ref|NP_510607.1| human Cockayne Syndrome B homolog (...   198   1e-48
gi|30145715|emb|CAB03135.2| Hypothetical protein F53H4.1 [Caenor...   198   1e-48
gi|25027819|ref|NP_737873.1| putative chromodomain helicase [Cor...   198   1e-48
gi|19552388|ref|NP_600390.1| putative helicase [Corynebacterium ...   197   1e-48
gi|13507759|ref|NP_109708.1| similar to helicases [Mycoplasma pn...   197   1e-48
gi|50409339|ref|XP_456864.1| unnamed protein product [Debaryomyc...   197   1e-48
gi|46129542|ref|ZP_00164017.2| COG0553: Superfamily II DNA/RNA h...   197   2e-48
gi|50255283|gb|EAL18018.1| hypothetical protein CNBK0390 [Crypto...   197   2e-48
gi|38233618|ref|NP_939385.1| SNF2/RAD54 family protein [Coryneba...   197   2e-48
gi|16332119|ref|NP_442847.1| helicase of the snf2/rad54 family [...   197   2e-48
gi|33866892|ref|NP_898451.1| SNF2 helicase homolog [Synechococcu...   197   2e-48
gi|50308261|ref|XP_454131.1| unnamed protein product [Kluyveromy...   197   2e-48
gi|50312039|ref|XP_456051.1| unnamed protein product [Kluyveromy...   197   2e-48
gi|21909786|ref|NP_664054.1| putative SNF helicase [Streptococcu...   196   3e-48
gi|3413850|dbj|BAA32289.1| KIAA0444 protein [Homo sapiens]            196   4e-48
gi|32404476|ref|XP_322851.1| hypothetical protein [Neurospora cr...   196   5e-48
gi|19745454|ref|NP_606590.1| putative SNF helicase [Streptococcu...   195   7e-48
gi|23612816|ref|NP_704355.1| ATP-dependant helicase, putative [P...   195   7e-48
gi|45188182|ref|NP_984405.1| ADR309Wp [Eremothecium gossypii] >g...   195   9e-48
gi|48851519|ref|ZP_00305733.1| COG0553: Superfamily II DNA/RNA h...   194   1e-47
gi|15674499|ref|NP_268673.1| putative SNF helicase [Streptococcu...   194   1e-47
gi|23485550|gb|EAA20470.1| DOMINO B-related [Plasmodium yoelii y...   194   2e-47
gi|50311185|ref|XP_455616.1| unnamed protein product [Kluyveromy...   193   4e-47
gi|50549907|ref|XP_502425.1| hypothetical protein [Yarrowia lipo...   192   5e-47
gi|17231890|ref|NP_488438.1| SNF2 helicase homolog [Nostoc sp. P...   192   6e-47
gi|46190976|ref|ZP_00120784.2| COG0553: Superfamily II DNA/RNA h...   192   8e-47
gi|23466281|ref|NP_696884.1| possible helicase [Bifidobacterium ...   192   8e-47
gi|6320541|ref|NP_010621.1| Swi2/Snf2-related ATPase, component ...   192   8e-47
gi|50418184|gb|AAH77717.1| CHD1L protein [Homo sapiens]               191   1e-46
gi|47157001|gb|AAT12371.1| global transcription activator [Anton...   191   1e-46
gi|49134234|ref|XP_413214.1| hypothetical protein AN9077.2 [Aspe...   191   1e-46
gi|21961171|gb|AAH34540.1| Unknown (protein for IMAGE:3499584) [...   190   2e-46
gi|32416130|ref|XP_328543.1| hypothetical protein [Neurospora cr...   189   4e-46
gi|42525525|ref|NP_970623.1| Snf2 family protein [Treponema dent...   189   5e-46
gi|45200885|ref|NP_986455.1| AGL212Wp [Eremothecium gossypii] >g...   189   7e-46
gi|50290775|ref|XP_447820.1| unnamed protein product [Candida gl...   187   1e-45
gi|49078758|ref|XP_403100.1| hypothetical protein UM05485.1 [Ust...   187   3e-45
gi|39596097|emb|CAE69733.1| Hypothetical protein CBG16004 [Caeno...   187   3e-45
gi|46397086|sp|O13682|YDY1_SCHPO Hypothetical helicase C11E3.01c...   186   3e-45
gi|37362617|ref|NP_009629.2| genetic interaction with DMC1; Rdh5...   186   6e-45
gi|586510|sp|P38086|YBS3_YEAST Hypothetical 108.0 kDa helicase i...   186   6e-45
gi|15806278|ref|NP_294983.1| DNA helicase, SNF2/RAD54 family [De...   185   7e-45
gi|50293969|ref|XP_449396.1| unnamed protein product [Candida gl...   185   7e-45
gi|45533168|ref|ZP_00184160.1| COG0553: Superfamily II DNA/RNA h...   185   1e-44
gi|50746413|ref|XP_420485.1| PREDICTED: similar to hypothetical ...   185   1e-44
gi|46438788|gb|EAK98114.1| hypothetical protein CaO19.12827 [Can...   184   2e-44
gi|15835457|ref|NP_297216.1| helicase, Snf2 family [Chlamydia mu...   183   3e-44
gi|26333481|dbj|BAC30458.1| unnamed protein product [Mus musculus]    183   3e-44
gi|47217489|emb|CAG10869.1| unnamed protein product [Tetraodon n...   182   5e-44
gi|22299156|ref|NP_682403.1| ORF_ID:tlr1613~putative helicase [T...   182   8e-44
gi|47212925|emb|CAF90297.1| unnamed protein product [Tetraodon n...   181   1e-43


>gi|32563629|ref|NP_491994.2| chromo domain and SNF2 related domain
            and helicase, C-terminal (1H586) [Caenorhabditis elegans]
 gi|25004979|emb|CAB07481.2| Hypothetical protein H06O01.2
            [Caenorhabditis elegans]
          Length = 1461

 Score = 2342 bits (6068), Expect = 0.0
 Identities = 1200/1384 (86%), Positives = 1200/1384 (86%)
 Frame = -1

Query: 4398 MWNQSESSSGSDAEPDEKTDEPVREEENPEGNSTSEDNDEKEKXXXXXXXXXXXXXXXXX 4219
            MWNQSESSSGSDAEPDEKTDEPVREEENPEGNSTSEDNDEKEK
Sbjct: 1    MWNQSESSSGSDAEPDEKTDEPVREEENPEGNSTSEDNDEKEKAADSPESSSDQSDDSDD 60

Query: 4218 XXXXXXXXXXXXXXPKKKNNNNRGMDAETRKLLENENYFXXXXXXXXXXXXXXXXXXXXX 4039
                          PKKKNNNNRGMDAETRKLLENENYF
Sbjct: 61   ASENSSSSEPDEPAPKKKNNNNRGMDAETRKLLENENYFRRSKRSKRQDDSPSDNSEESQ 120

Query: 4038 XXXXXXXDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNYAEKNSXXXXXXXDVLEWD 3859
                   D                                NYAEKNS       DVLEWD
Sbjct: 121  SSEDDWDDRRKPRRTVTKKVVKQTKKAVSVVKRKSVKGNVNYAEKNSDDDIDDDDVLEWD 180

Query: 3858 EEPAVPAEGPAILTETVERVIKWRHGVPGATGSATTCYNIADKGDPNDQIPGDKTEQQFF 3679
            EEPAVPAEGPAILTETVERVIKWRHGVPGATGSATTCYNIADKGDPNDQIPGDKTEQQFF
Sbjct: 181  EEPAVPAEGPAILTETVERVIKWRHGVPGATGSATTCYNIADKGDPNDQIPGDKTEQQFF 240

Query: 3678 VKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSADKEYIEFFECEQQ 3499
            VKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSADKEYIEFFECEQQ
Sbjct: 241  VKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSADKEYIEFFECEQQ 300

Query: 3498 MAEELCEEYKKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWEDEKMVAPEQIK 3319
            MAEELCEEYKKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWEDEKMVAPEQIK
Sbjct: 301  MAEELCEEYKKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWEDEKMVAPEQIK 360

Query: 3318 AYYHRIENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLNWMVYAW 3139
            AYYHRIENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLNWMVYAW
Sbjct: 361  AYYHRIENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLNWMVYAW 420

Query: 3138 CKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQWAPEM 2959
            CKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQWAPEM
Sbjct: 421  CKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQWAPEM 480

Query: 2958 NLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLSSIDWAALLVDEA 2779
            NLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLSSIDWAALLVDEA
Sbjct: 481  NLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLSSIDWAALLVDEA 540

Query: 2778 HRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKFDCWEEFETAHN 2599
            HRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKFDCWEEFETAHN
Sbjct: 541  HRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKFDCWEEFETAHN 600

Query: 2598 ESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQFYKWILTKNYRE 2419
            ESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQFYKWILTKNYRE
Sbjct: 601  ESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQFYKWILTKNYRE 660

Query: 2418 LSKGVKGSINGFVNLVMELKKCCNHASLTRQYDHIYDDAQGXXXXXXXXXXXXXXXXXXX 2239
            LSKGVKGSINGFVNLVMELKKCCNHASLTRQYDHIYDDAQG
Sbjct: 661  LSKGVKGSINGFVNLVMELKKCCNHASLTRQYDHIYDDAQGRLQQLLKSSGKLILLDKLL 720

Query: 2238 XXXXXXGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTD 2059
                  GHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTD
Sbjct: 721  CRLKDKGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTD 780

Query: 2058 FAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGS 1879
            FAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGS
Sbjct: 781  FAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGS 840

Query: 1878 VEEEIVERAKRKLVLDHLVIQRMDTTGKTVLSKNATASGSVPFDKQELSAILKFGAVXXX 1699
            VEEEIVERAKRKLVLDHLVIQRMDTTGKTVLSKNATASGSVPFDKQELSAILKFGAV
Sbjct: 841  VEEEIVERAKRKLVLDHLVIQRMDTTGKTVLSKNATASGSVPFDKQELSAILKFGAVELF 900

Query: 1698 XXXXXXXXXXEVDIDRILMGAETREAEEEVMKENELLSSFKYANFAIDEEKDIAAATDEW 1519
                      EVDIDRILMGAETREAEEEVMKENELLSSFKYANFAIDEEKDIAAATDEW
Sbjct: 901  KEKEGEEQEPEVDIDRILMGAETREAEEEVMKENELLSSFKYANFAIDEEKDIAAATDEW 960

Query: 1518 AAIIPEEDRNRILEEERMKELAEMNLAPRQRKQPIPQVVXXXXXXXXXXXXXXXXXXXXK 1339
            AAIIPEEDRNRILEEERMKELAEMNLAPRQRKQPIPQVV                    K
Sbjct: 961  AAIIPEEDRNRILEEERMKELAEMNLAPRQRKQPIPQVVEDDDGDDDEEEDDTGKKKKKK 1020

Query: 1338 AVGNFTIPEIKRFIKSFRKFSMPLNRLEEIAQDAELEEHSTDEMKKLVESLSEACKKAAD 1159
            AVGNFTIPEIKRFIKSFRKFSMPLNRLEEIAQDAELEEHSTDEMKKLVESLSEACKKAAD
Sbjct: 1021 AVGNFTIPEIKRFIKSFRKFSMPLNRLEEIAQDAELEEHSTDEMKKLVESLSEACKKAAD 1080

Query: 1158 EFDSNEKNGDAGAAESEKKDIERKFKFHTCDVNLKQIERSHAELKPLHEILKSEETKTSF 979
            EFDSNEKNGDAGAAESEKKDIERKFKFHTCDVNLKQIERSHAELKPLHEILKSEETKTSF
Sbjct: 1081 EFDSNEKNGDAGAAESEKKDIERKFKFHTCDVNLKQIERSHAELKPLHEILKSEETKTSF 1140

Query: 978  KPPANAKLQKGWDVDWSRPDDSALLLGVWKYGYGSWEAIKMDPTLGLADKIFIKDKTKKP 799
            KPPANAKLQKGWDVDWSRPDDSALLLGVWKYGYGSWEAIKMDPTLGLADKIFIKDKTKKP
Sbjct: 1141 KPPANAKLQKGWDVDWSRPDDSALLLGVWKYGYGSWEAIKMDPTLGLADKIFIKDKTKKP 1200

Query: 798  QGKNLQVRVDYLLKLMSXXXXXXXXXXXXXXXXXXVPVGPEKKKRHTNNVPQEGXXXXXX 619
            QGKNLQVRVDYLLKLMS                  VPVGPEKKKRHTNNVPQEG
Sbjct: 1201 QGKNLQVRVDYLLKLMSKDKVKTTEKKERKRKADDVPVGPEKKKRHTNNVPQEGEKKKKE 1260

Query: 618  XXXXKNSSSLKDQLALLSIDKSLYGGALEDSSAKPFLECVKLCMPVHKYMKKLKEAQEAK 439
                KNSSSLKDQLALLSIDKSLYGGALEDSSAKPFLECVKLCMPVHKYMKKLKEAQEAK
Sbjct: 1261 KKEEKNSSSLKDQLALLSIDKSLYGGALEDSSAKPFLECVKLCMPVHKYMKKLKEAQEAK 1320

Query: 438  NQADEAKYLTRLGDSFLENLETLIKKKPKTNIRKWYNYLWIFLCKFTLREPGEMADRYRS 259
            NQADEAKYLTRLGDSFLENLETLIKKKPKTNIRKWYNYLWIFLCKFTLREPGEMADRYRS
Sbjct: 1321 NQADEAKYLTRLGDSFLENLETLIKKKPKTNIRKWYNYLWIFLCKFTLREPGEMADRYRS 1380

Query: 258  ITSD 247
            ITSD
Sbjct: 1381 ITSD 1384


>gi|7504867|pir||T23056 hypothetical protein H06O01.2 - Caenorhabditis
            elegans
          Length = 1465

 Score = 2342 bits (6068), Expect = 0.0
 Identities = 1200/1384 (86%), Positives = 1200/1384 (86%)
 Frame = -1

Query: 4398 MWNQSESSSGSDAEPDEKTDEPVREEENPEGNSTSEDNDEKEKXXXXXXXXXXXXXXXXX 4219
            MWNQSESSSGSDAEPDEKTDEPVREEENPEGNSTSEDNDEKEK
Sbjct: 1    MWNQSESSSGSDAEPDEKTDEPVREEENPEGNSTSEDNDEKEKAADSPESSSDQSDDSDD 60

Query: 4218 XXXXXXXXXXXXXXPKKKNNNNRGMDAETRKLLENENYFXXXXXXXXXXXXXXXXXXXXX 4039
                          PKKKNNNNRGMDAETRKLLENENYF
Sbjct: 61   ASENSSSSEPDEPAPKKKNNNNRGMDAETRKLLENENYFRRSKRSKRQDDSPSDNSEESQ 120

Query: 4038 XXXXXXXDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNYAEKNSXXXXXXXDVLEWD 3859
                   D                                NYAEKNS       DVLEWD
Sbjct: 121  SSEDDWDDRRKPRRTVTKKVVKQTKKAVSVVKRKSVKGNVNYAEKNSDDDIDDDDVLEWD 180

Query: 3858 EEPAVPAEGPAILTETVERVIKWRHGVPGATGSATTCYNIADKGDPNDQIPGDKTEQQFF 3679
            EEPAVPAEGPAILTETVERVIKWRHGVPGATGSATTCYNIADKGDPNDQIPGDKTEQQFF
Sbjct: 181  EEPAVPAEGPAILTETVERVIKWRHGVPGATGSATTCYNIADKGDPNDQIPGDKTEQQFF 240

Query: 3678 VKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSADKEYIEFFECEQQ 3499
            VKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSADKEYIEFFECEQQ
Sbjct: 241  VKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSADKEYIEFFECEQQ 300

Query: 3498 MAEELCEEYKKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWEDEKMVAPEQIK 3319
            MAEELCEEYKKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWEDEKMVAPEQIK
Sbjct: 301  MAEELCEEYKKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWEDEKMVAPEQIK 360

Query: 3318 AYYHRIENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLNWMVYAW 3139
            AYYHRIENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLNWMVYAW
Sbjct: 361  AYYHRIENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLNWMVYAW 420

Query: 3138 CKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQWAPEM 2959
            CKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQWAPEM
Sbjct: 421  CKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQWAPEM 480

Query: 2958 NLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLSSIDWAALLVDEA 2779
            NLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLSSIDWAALLVDEA
Sbjct: 481  NLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLSSIDWAALLVDEA 540

Query: 2778 HRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKFDCWEEFETAHN 2599
            HRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKFDCWEEFETAHN
Sbjct: 541  HRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKFDCWEEFETAHN 600

Query: 2598 ESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQFYKWILTKNYRE 2419
            ESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQFYKWILTKNYRE
Sbjct: 601  ESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQFYKWILTKNYRE 660

Query: 2418 LSKGVKGSINGFVNLVMELKKCCNHASLTRQYDHIYDDAQGXXXXXXXXXXXXXXXXXXX 2239
            LSKGVKGSINGFVNLVMELKKCCNHASLTRQYDHIYDDAQG
Sbjct: 661  LSKGVKGSINGFVNLVMELKKCCNHASLTRQYDHIYDDAQGRLQQLLKSSGKLILLDKLL 720

Query: 2238 XXXXXXGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTD 2059
                  GHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTD
Sbjct: 721  CRLKDKGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTD 780

Query: 2058 FAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGS 1879
            FAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGS
Sbjct: 781  FAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGS 840

Query: 1878 VEEEIVERAKRKLVLDHLVIQRMDTTGKTVLSKNATASGSVPFDKQELSAILKFGAVXXX 1699
            VEEEIVERAKRKLVLDHLVIQRMDTTGKTVLSKNATASGSVPFDKQELSAILKFGAV
Sbjct: 841  VEEEIVERAKRKLVLDHLVIQRMDTTGKTVLSKNATASGSVPFDKQELSAILKFGAVELF 900

Query: 1698 XXXXXXXXXXEVDIDRILMGAETREAEEEVMKENELLSSFKYANFAIDEEKDIAAATDEW 1519
                      EVDIDRILMGAETREAEEEVMKENELLSSFKYANFAIDEEKDIAAATDEW
Sbjct: 901  KEKEGEEQEPEVDIDRILMGAETREAEEEVMKENELLSSFKYANFAIDEEKDIAAATDEW 960

Query: 1518 AAIIPEEDRNRILEEERMKELAEMNLAPRQRKQPIPQVVXXXXXXXXXXXXXXXXXXXXK 1339
            AAIIPEEDRNRILEEERMKELAEMNLAPRQRKQPIPQVV                    K
Sbjct: 961  AAIIPEEDRNRILEEERMKELAEMNLAPRQRKQPIPQVVEDDDGDDDEEEDDTGKKKKKK 1020

Query: 1338 AVGNFTIPEIKRFIKSFRKFSMPLNRLEEIAQDAELEEHSTDEMKKLVESLSEACKKAAD 1159
            AVGNFTIPEIKRFIKSFRKFSMPLNRLEEIAQDAELEEHSTDEMKKLVESLSEACKKAAD
Sbjct: 1021 AVGNFTIPEIKRFIKSFRKFSMPLNRLEEIAQDAELEEHSTDEMKKLVESLSEACKKAAD 1080

Query: 1158 EFDSNEKNGDAGAAESEKKDIERKFKFHTCDVNLKQIERSHAELKPLHEILKSEETKTSF 979
            EFDSNEKNGDAGAAESEKKDIERKFKFHTCDVNLKQIERSHAELKPLHEILKSEETKTSF
Sbjct: 1081 EFDSNEKNGDAGAAESEKKDIERKFKFHTCDVNLKQIERSHAELKPLHEILKSEETKTSF 1140

Query: 978  KPPANAKLQKGWDVDWSRPDDSALLLGVWKYGYGSWEAIKMDPTLGLADKIFIKDKTKKP 799
            KPPANAKLQKGWDVDWSRPDDSALLLGVWKYGYGSWEAIKMDPTLGLADKIFIKDKTKKP
Sbjct: 1141 KPPANAKLQKGWDVDWSRPDDSALLLGVWKYGYGSWEAIKMDPTLGLADKIFIKDKTKKP 1200

Query: 798  QGKNLQVRVDYLLKLMSXXXXXXXXXXXXXXXXXXVPVGPEKKKRHTNNVPQEGXXXXXX 619
            QGKNLQVRVDYLLKLMS                  VPVGPEKKKRHTNNVPQEG
Sbjct: 1201 QGKNLQVRVDYLLKLMSKDKVKTTEKKERKRKADDVPVGPEKKKRHTNNVPQEGEKKKKE 1260

Query: 618  XXXXKNSSSLKDQLALLSIDKSLYGGALEDSSAKPFLECVKLCMPVHKYMKKLKEAQEAK 439
                KNSSSLKDQLALLSIDKSLYGGALEDSSAKPFLECVKLCMPVHKYMKKLKEAQEAK
Sbjct: 1261 KKEEKNSSSLKDQLALLSIDKSLYGGALEDSSAKPFLECVKLCMPVHKYMKKLKEAQEAK 1320

Query: 438  NQADEAKYLTRLGDSFLENLETLIKKKPKTNIRKWYNYLWIFLCKFTLREPGEMADRYRS 259
            NQADEAKYLTRLGDSFLENLETLIKKKPKTNIRKWYNYLWIFLCKFTLREPGEMADRYRS
Sbjct: 1321 NQADEAKYLTRLGDSFLENLETLIKKKPKTNIRKWYNYLWIFLCKFTLREPGEMADRYRS 1380

Query: 258  ITSD 247
            ITSD
Sbjct: 1381 ITSD 1384


>gi|39583607|emb|CAE65711.1| Hypothetical protein CBG10790
            [Caenorhabditis briggsae]
          Length = 1463

 Score = 2077 bits (5382), Expect = 0.0
 Identities = 1072/1410 (76%), Positives = 1138/1410 (80%), Gaps = 26/1410 (1%)
 Frame = -1

Query: 4398 MWNQSESSSGSDAEPDEKTDEPVR-----EEENPEGNSTSEDNDEKE-------KXXXXX 4255
            MWNQSESSSGSDA+ DEK+DEP+R     EE    G+ +SE+ +E++       K
Sbjct: 1    MWNQSESSSGSDADSDEKSDEPMRKTKVIEEGVSSGSGSSEEKEEEDSDYENEAKAEKSP 60

Query: 4254 XXXXXXXXXXXXXXXXXXXXXXXXXXPKKKNNNNRGMDAETRKLLENENYFXXXXXXXXX 4075
                                      PKKK NN+RGMDAETRKLLE ENYF
Sbjct: 61   DSTSEQSDDSEESSGDSSNSEADEPAPKKKVNNSRGMDAETRKLLEEENYFRRSQRSKRT 120

Query: 4074 XXXXXXXXXXXXXXXXXX----XDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNYAE 3907
                                                                    +Y E
Sbjct: 121  EESVSEKSGESESSDDDEWDDGGRKKKSSRRSAVKKTVVKKVVQSVIKRKSVKGNVSYVE 180

Query: 3906 KNSXXXXXXXDVLEWDEEPAVPAEGPAILTETVERVIKWRHGVPGATGSATTCYNIADKG 3727
            KNS       DVLEWDE PAVP EGPA+LTETVERVIKWR GVPGATGS TTCYN+A+KG
Sbjct: 181  KNSDEDIDDDDVLEWDEGPAVPVEGPAVLTETVERVIKWRIGVPGATGSGTTCYNVAEKG 240

Query: 3726 DPNDQIPGDKTEQQFFVKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWK 3547
            DPN+Q P +KTE+QFFVKWTGWSHLHNTWESENSL +M+AKG+KKVQNYVKKQKEVEMWK
Sbjct: 241  DPNEQ-PVEKTEKQFFVKWTGWSHLHNTWESENSLTIMHAKGIKKVQNYVKKQKEVEMWK 299

Query: 3546 RSADKEYIEFFECEQQMAEELCEEYKKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYS 3367
            RSADKEYIEF+ECEQQMAEELCEEYKKVERVVAHQTSRDRA DGS ATE+LIKWSGLPY+
Sbjct: 300  RSADKEYIEFYECEQQMAEELCEEYKKVERVVAHQTSRDRAPDGSFATEFLIKWSGLPYA 359

Query: 3366 DCTWEDEKMVAPEQIKAYYHRIENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHK 3187
            DCTWEDEKMVAP+QI+ YYHR+ENLK PNKN+ VLRKRPKFEK ES PD+LKT+G+  HK
Sbjct: 360  DCTWEDEKMVAPDQIQGYYHRVENLKPPNKNATVLRKRPKFEKLESQPDYLKTNGD--HK 417

Query: 3186 LRDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLS 3007
            LRDYQLEGLNWM+YAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLS
Sbjct: 418  LRDYQLEGLNWMIYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLS 477

Query: 3006 TMAAWQKEFAQWAPEMNLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDK 2827
            TMAAWQKEFAQWAP++NL++YMGDVVSRDMIRQYEWFVGGTKKMK+NAILTTYEILLKDK
Sbjct: 478  TMAAWQKEFAQWAPDINLIIYMGDVVSRDMIRQYEWFVGGTKKMKVNAILTTYEILLKDK 537

Query: 2826 AFLSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFI 2647
            AFLSS+DWAALLVDEAHRLKNDESLLYK L QFRFNHKLLITGTPLQNSLKELWALLHFI
Sbjct: 538  AFLSSVDWAALLVDEAHRLKNDESLLYKCLIQFRFNHKLLITGTPLQNSLKELWALLHFI 597

Query: 2646 MPEKFDCWEEFETAHNESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTA 2467
            MPEKFDCWEEFETAHNESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTA
Sbjct: 598  MPEKFDCWEEFETAHNESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTA 657

Query: 2466 HQKQFYKWILTKNYRELSKGVKGSINGFVNLVMELKKCCNHASLTRQYDHIYDDAQGXXX 2287
            HQKQFYKWILTKNYRELSKGVKGSINGFVNLVMELKKCCNHASLTRQYD+IYDDAQG
Sbjct: 658  HQKQFYKWILTKNYRELSKGVKGSINGFVNLVMELKKCCNHASLTRQYDYIYDDAQGRLQ 717

Query: 2286 XXXXXXXXXXXXXXXXXXXXXXGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRAD 2107
                                  GHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRAD
Sbjct: 718  QLLKSSGKLILLDKLLCRLRDKGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRAD 777

Query: 2106 LRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRI 1927
            LRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRI
Sbjct: 778  LRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRI 837

Query: 1926 GQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTVLSKNATASGSVPFD 1747
            GQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTVLSKNATASGSVPFD
Sbjct: 838  GQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTVLSKNATASGSVPFD 897

Query: 1746 KQELSAILKFGAVXXXXXXXXXXXXXEVDIDRILMGAETREAEEEVMKENELLSSFKYAN 1567
            KQELSAILKFGAV             EVDIDRILMGAETREAEEEV+KENELLSSFKYAN
Sbjct: 898  KQELSAILKFGAVELFKEKEGEEQEPEVDIDRILMGAETREAEEEVLKENELLSSFKYAN 957

Query: 1566 FAIDEEKDIAAATDEWAAIIPEEDRNRILEEERMKELAEMNLAPRQRKQPIPQVV-XXXX 1390
            FAIDEEKDIAAATDEWAAIIPEEDRNRILEEERMKELAEMNLAPRQRKQP+PQVV
Sbjct: 958  FAIDEEKDIAAATDEWAAIIPEEDRNRILEEERMKELAEMNLAPRQRKQPMPQVVEDGED 1017

Query: 1389 XXXXXXXXXXXXXXXXKAVGNFTIPEIKRFIKSFRKFSMPLNRLEEIAQDAELEEHSTDE 1210
                            K +G+FT+ EIKRFI++FRKFSMPL RLEEIAQDAELEEHST+E
Sbjct: 1018 GDDDDDEEDGGKKKSKKKIGSFTVAEIKRFIRAFRKFSMPLERLEEIAQDAELEEHSTEE 1077

Query: 1209 MKKLVESLSEACKKAADEFDSNEKNGDAGA-----AESEKKDIERKFKFHTCDVNLKQIE 1045
            + KLVESL+EACKKAADEFDS EKNG A +     A+ ++KD +RKFKF TCDVNLKQIE
Sbjct: 1078 VMKLVESLTEACKKAADEFDSAEKNGRAASSSAEGADKKEKDADRKFKFQTCDVNLKQIE 1137

Query: 1044 RSHAELKPLHEILKSEETKTSFKPPANAKLQKGWDVDWSRPDDSALLLGVWKYGYGSWEA 865
            RSHAELKPLHE LKS + KTSFKPP NAK QKGWDV+W   DD ALL GVWKYGYGSWEA
Sbjct: 1138 RSHAELKPLHEALKSVDKKTSFKPPMNAKPQKGWDVEWKWDDDGALLWGVWKYGYGSWEA 1197

Query: 864  IKMDPTLGLADKIFIKDKTKKPQGKNLQVRVDYLLKLMSXXXXXXXXXXXXXXXXXXVPV 685
            IKMDP+LGLADKIFIKDKTKKPQGKNLQVRVDYLLKLM+                   P
Sbjct: 1198 IKMDPSLGLADKIFIKDKTKKPQGKNLQVRVDYLLKLMAKDKKKGPEKKDRKRKADDTPS 1257

Query: 684  G-PEKKKRHTNNVPQEG---XXXXXXXXXXKNSSSLKDQLALLSIDKSLYGGALEDSSAK 517
            G P+KKK+HTNNV  +              K+ SSLKDQL++L+IDKSLYGG LEDSSAK
Sbjct: 1258 GAPDKKKKHTNNVAPDADHKKKEKKEKSEDKSRSSLKDQLSVLTIDKSLYGGVLEDSSAK 1317

Query: 516  PFLECVKLCMPVHKYMKKLKEAQEAKNQADEAKYLTRLGDSFLENLETLIKKKPKTNIRK 337
            PFLECVKLCMPVHKYMKKLKEAQE KN+ DE KYLTRLGDSFL NLETL+KKKPKTNIRK
Sbjct: 1318 PFLECVKLCMPVHKYMKKLKEAQETKNKEDETKYLTRLGDSFLANLETLLKKKPKTNIRK 1377

Query: 336  WYNYLWIFLCKFTLREPGEMADRYRSITSD 247
            WYNYLWIFL KFTLREPGEMADRYR ITSD
Sbjct: 1378 WYNYLWIFLSKFTLREPGEMADRYRQITSD 1407


>gi|34857217|ref|XP_218790.2| similar to
            Chromodomain-helicase-DNA-binding protein 2 (CHD-2)
            [Rattus norvegicus]
          Length = 1433

 Score = 1023 bits (2644), Expect = 0.0
 Identities = 570/1220 (46%), Positives = 749/1220 (60%), Gaps = 58/1220 (4%)
 Frame = -1

Query: 3819 TETVERVIKWRHGVPGATGSATTCYNIADKGDPNDQIPGDKTEQ--QFFVKWTGWSHLHN 3646
            +ET+E+V+  R G  GATG++TT Y +   GDP+     ++ E   Q+ +KW GWS++H+
Sbjct: 224  SETIEKVLDSRLGKKGATGASTTVYAVEANGDPSGDFDTEREEGEIQYLIKWKGWSYIHS 283

Query: 3645 TWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSADKEYIEFFECEQQMAEELCEEYKK 3466
            TWESE SL     KGLKK++N+ KK+ E++ W      E +E+F C+Q++A EL ++Y+
Sbjct: 284  TWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNCQQELASELNKQYQI 343

Query: 3465 VERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWEDEKMVAPEQ---IKAYYHRIEN 3295
            VERV+AH     R    S   EYL KW GLPYS+C+WEDE ++  +    I +++ R  +
Sbjct: 344  VERVIAHS----RKPAPSNEPEYLCKWMGLPYSECSWEDEALIGKKFQSCIDSFHSRNNS 399

Query: 3294 LKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLNWMVYAWCKGNSSIL 3115
               P +    L++RP+F   +  P +L   G    +LRDYQLEGLNW+ ++WCK NS IL
Sbjct: 400  KTIPTRECKALKQRPRFVALKKQPAYL---GGENLELRDYQLEGLNWLAHSWCKSNSVIL 456

Query: 3114 ADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQWAPEMNLVVYMGD 2935
            ADEMGLGKTIQ+IS L+ LFH++ L GP+L+VVPLST+ +WQ+EF  WAPE+N+VVY+GD
Sbjct: 457  ADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLSTLTSWQREFEIWAPEVNVVVYIGD 516

Query: 2934 VVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLSSIDWAALLVDEAHRLKNDES 2755
            ++SR+ IR+YEW    TK++K NA++TTYEILLKDK  L SI+WA L VDEAHRLKND+S
Sbjct: 517  LMSRNTIREYEWIHSQTKRLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDS 576

Query: 2754 LLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKFDCWEEFETAHNESNHKGIS 2575
            LLYK+L  F+ NH+LLITGTPLQNSLKELW+LLHFIMPEKF+ WE+FE  H +    G
Sbjct: 577  LLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGYQ 636

Query: 2574 ALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQFYKWILTKNYRELSKGVKGS 2395
            +LHK LEPFLLRRVKKDVEKSLP K EQILRV+M+A QKQ+YKWILT+NY+ L+KG +GS
Sbjct: 637  SLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGS 696

Query: 2394 INGFVNLVMELKKCCNHASLTR-QYDHIYDDAQGXXXXXXXXXXXXXXXXXXXXXXXXXG 2218
             +GF+N+VMELKKCCNH  L R   D   +  Q                          G
Sbjct: 697  TSGFLNIVMELKKCCNHCYLIRAPEDSERETGQEVLQSLIRSSGKLILLDKLLTRLRERG 756

Query: 2217 HRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLST 2038
            +RVLIFSQMV MLDIL EYL ++ +P QRLDGS++ ++RKQALDH+NA GS DF FLLST
Sbjct: 757  NRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLST 816

Query: 2037 RAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVE 1858
            RAGGLGINLA+ADTV+IFDSDWNPQNDLQA +RAHRIGQ K VNIYRLVTKG+VEEEI+E
Sbjct: 817  RAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIE 876

Query: 1857 RAKRKLVLDHLVIQRMDTTGKTVLSKNATASGSVPFDKQELSAILKFGAVXXXXXXXXXX 1678
            RAK+K+VLDHLVIQRMDTTG+TVL  N+  S S PF+K+EL+AILKFGA
Sbjct: 877  RAKKKMVLDHLVIQRMDTTGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKEIEGEE 936

Query: 1677 XX-XEVDIDRILMGAETREAEEEVMKENELLSSFKYANFAI--DEEKDIAAATDEWAAII 1507
                E+DID IL  AETRE E      +ELLS FK ANFA   DEE+       +W  II
Sbjct: 937  SEPQEMDIDEILRLAETRENEVSTSATDELLSQFKVANFATMEDEEELEERPHKDWDEII 996

Query: 1506 PEEDRNRILEEERMKELAEMNLAPR-----------------------QRKQPIPQVVXX 1396
            PEE R ++ EEER KEL E+ + PR                       QR
Sbjct: 997  PEEQRKKVEEEERQKELEEIYMLPRIRSSTKKAQTNDSDSDTESKRQAQRSSASESETDD 1056

Query: 1395 XXXXXXXXXXXXXXXXXXKAVGNFTIPEIKRFIKSFRKFSMPLNRLEEIAQDAELEEHST 1216
                                V  FT  EI+RFIK+++KF +PL RLE IA+DAEL + S
Sbjct: 1057 SDDDKKPKRRGRPRSVRKDLVEGFTDAEIRRFIKAYKKFGLPLERLECIARDAELVDKSV 1116

Query: 1215 DEMKKLVESLSEACKKAADEFDSNEKNGDAGAAESEKKDIERKFKFHTCDVNLKQIERSH 1036
             ++K+L E +  +C  A  E++   K  +A   +   K      K     VN+K I +
Sbjct: 1117 ADLKRLGELVHNSCVSAMQEYEEQLKE-NASEGKGPGKRRGPTIKISGVQVNVKSIIQHE 1175

Query: 1035 AELKPLHEILKSE-ETKTSFKPPANAKLQKGWDVDWSRPDDSALLLGVWKYGYGSWEAIK 859
             E + LH+ +  + E K  +      K    +DV+W   DDS LLLG++++GYG+WE IK
Sbjct: 1176 EEFEMLHKSIPVDPEEKKKYCLTCRVKAAH-FDVEWGVEDDSRLLLGIYEHGYGNWELIK 1234

Query: 858  MDPTLGLADKIFIKDKTKKPQGKNLQVRVDYLLKLMSXXXXXXXXXXXXXXXXXXVPVGP 679
             DP L L DKI   +  KKPQGK LQ RVDYLLKL+
Sbjct: 1235 TDPELKLTDKILPVETDKKPQGKQLQTRVDYLLKLLRKGLEKKGTVTSGEEAKLKKRKPR 1294

Query: 678  EKKK-----------------RHTNNVPQEGXXXXXXXXXXKNSSSLKDQ--LALLSIDK 556
             KK+                 RH++N  +EG           +S S + Q  + + +  +
Sbjct: 1295 VKKENKAPRLKDEHGLELSSPRHSDNPSEEGEVKVKGGDAKSSSKSKRSQGPVHITAGSE 1354

Query: 555  SLYGGALEDS--SAKPFLECVKLCMPVHKYMKKLKEAQEAKNQADEAKY----LTRLGDS 394
             +  G  ED     + F  C +   PV K +K+L +  +  N  ++ ++    L ++GD
Sbjct: 1355 PVPIGEDEDDDLDQETFSICKERMRPVKKALKQLDKPDKGLNVQEQLEHTRSCLLKIGDR 1414

Query: 393  FLENLETLIKKKPKTNIRKW 334
              E L    +++   +I+ W
Sbjct: 1415 IAECLRAYSEQE---HIKLW 1431


>gi|6680928|ref|NP_031716.1| chromodomain helicase DNA binding protein
            1 [Mus musculus]
 gi|1345773|sp|P40201|CHD1_MOUSE Chromodomain-helicase-DNA-binding
            protein 1 (CHD-1)
 gi|455015|gb|AAB08486.1| DNA-binding protein [Mus musculus]
          Length = 1711

 Score = 1021 bits (2640), Expect = 0.0
 Identities = 570/1236 (46%), Positives = 752/1236 (60%), Gaps = 63/1236 (5%)
 Frame = -1

Query: 3816 ETVERVIKWRHGVPGATGSATTCYNIADKGDPN-----DQIPGDKTEQQFFVKWTGWSHL 3652
            ET+ERV+  R G  GATG+ TT Y +   GDPN     ++ PGD    Q+ +KW GWSH+
Sbjct: 270  ETIERVMDCRVGRKGATGATTTIYAVEADGDPNAGFERNKEPGDI---QYLIKWKGWSHI 326

Query: 3651 HNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSADKEYIEFFECEQQMAEELCEEY 3472
            HNTWE+E +L   N +G+KK+ NY KK +E + W ++A  E +E++ C+Q++ ++L ++Y
Sbjct: 327  HNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQY 386

Query: 3471 KKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWEDEKMVAPEQ---IKAYYHRI 3301
            + VER++AH   +  A       +Y  KW GLPYS+C+WED  +++ +    I  Y+ R
Sbjct: 387  QIVERIIAHSNQKSAAG----LPDYYCKWQGLPYSECSWEDGALISKKFQTCIDEYFSRN 442

Query: 3300 ENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLNWMVYAWCKGNSS 3121
            ++  +P K+  VL++RP+F   +  P ++   G    +LRDYQL GLNW+ ++WCKGNS
Sbjct: 443  QSKTTPFKDCKVLKQRPRFVALKKQPSYI--GGHEGLELRDYQLNGLNWLAHSWCKGNSC 500

Query: 3120 ILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQWAPEMNLVVYM 2941
            ILADEMGLGKTIQ+IS L  LFH + L GP+L+VVPLST+ +WQ+E   WA +MN VVY+
Sbjct: 501  ILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYL 560

Query: 2940 GDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLSSIDWAALLVDEAHRLKND 2761
            GD+ SR+MIR +EW    TK++K N +LTTYEILLKDKAFL  ++WA + VDEAHRLKND
Sbjct: 561  GDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKND 620

Query: 2760 ESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKFDCWEEFETAHNESNHKG 2581
            +SLLYK+L  F+ NH+LLITGTPLQNSLKELW+LLHFIMPEKF  WE+FE  H +    G
Sbjct: 621  DSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYG 680

Query: 2580 ISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQFYKWILTKNYRELSKGVK 2401
             ++LHK+LEPFLLRRVKKDVEKSLP K EQILR++M+A QKQ+YKWILT+NY+ LSKG K
Sbjct: 681  YASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSK 740

Query: 2400 GSINGFVNLVMELKKCCNHASLTRQYD-HIYDDAQGXXXXXXXXXXXXXXXXXXXXXXXX 2224
            GS +GF+N++MELKKCCNH  L +  D + + + Q
Sbjct: 741  GSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRE 800

Query: 2223 XGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLL 2044
             G+RVLIFSQMV MLDIL EYL+ R+FP QRLDGS++ +LRKQALDH+NA GS DF FLL
Sbjct: 801  RGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLL 860

Query: 2043 STRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEI 1864
            STRAGGLGINLA+ADTV+IFDSDWNPQNDLQA +RAHRIGQ K VNIYRLVTKGSVEE+I
Sbjct: 861  STRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDI 920

Query: 1863 VERAKRKLVLDHLVIQRMDTTGKTVLSKNATASGSVPFDKQELSAILKFGAVXXXXX-XX 1687
            +ERAK+K+VLDHLVIQRMDTTGKTVL   +  S S PF+K+ELSAILKFGA
Sbjct: 921  LERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELSAILKFGAEELFKEPEG 980

Query: 1686 XXXXXXEVDIDRILMGAETREAEEEVMK-ENELLSSFKYANFAIDEEKDIAAATD----E 1522
                  E+DID IL  AET E E   +   +ELLS FK ANF+  +E DI    +
Sbjct: 981  EEQEPQEMDIDEILKRAETHENEPGPLSVGDELLSQFKVANFSNMDEDDIELEPERNSKN 1040

Query: 1521 WAAIIPEEDRNRILEEERMKELAEMNLAPRQRKQPIPQVVXXXXXXXXXXXXXXXXXXXX 1342
            W  IIPEE R R+ EEER KEL E+ + PR R     + +
Sbjct: 1041 WEEIIPEEQRRRLEEEERQKELEEIYMLPRMRN--CAKQISFNGSEGRRSRSRRYSGSDS 1098

Query: 1341 KAVG--------------------NFTIPEIKRFIKSFRKFSMPLNRLEEIAQDAELEEH 1222
             ++                      F+  EI+RFIKS++KF  PL RL+ IA+DAEL +
Sbjct: 1099 DSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAIARDAELVDK 1158

Query: 1221 STDEMKKLVESLSEACKKAADEFDSNEKNGDAGAAESEKKDIERKFKFHTCDVNLKQIER 1042
            S  ++++L E +   C KA    DS+     AG    + K     F+     VN K +
Sbjct: 1159 SETDLRRLGELVHNGCVKALK--DSSSGTERAGGRLGKVKG--PTFRISGVQVNAKLVIA 1214

Query: 1041 SHAELKPLHEILKSE-ETKTSFKPPANAKLQKGWDVDWSRPDDSALLLGVWKYGYGSWEA 865
               EL PLH+ + S+ E +  +  P + K    +D+DW + DDS LL+G+++YGYGSWE
Sbjct: 1215 HEDELIPLHKSIPSDPEERKQYTIPCHTKAAH-FDIDWGKEDDSNLLIGIYEYGYGSWEM 1273

Query: 864  IKMDPTLGLADKIFIKDKTKKPQGKNLQVRVDYLLKLMSXXXXXXXXXXXXXXXXXXVPV 685
            IKMDP L L  KI   D  KKPQ K LQ R DYL+KL+S
Sbjct: 1274 IKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSRDLAKREAQRLCGAGGSKRRK 1333

Query: 684  GPEKK-------------KRHTNNVPQEGXXXXXXXXXXKNSSSLKDQLALLSIDKSLYG 544
               KK             K  ++ +P E               S       +  D  ++
Sbjct: 1334 TRAKKSKAMKSIKVKEEIKSDSSPLPSEKSDEDDDKLNDSKPESKDRSKKSVVSDAPVHI 1393

Query: 543  GA----------LEDSSAKPFLECVKLCMPVHKYMKKLKEAQEAKNQADEAKY----LTR 406
             A           E+   K F  C +   PV   +K+L   ++  ++ ++ ++    L +
Sbjct: 1394 TASGEPVPIAEESEELDQKTFSICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIK 1453

Query: 405  LGDSFLENLETLIKKKPKTNIRKWYNYLWIFLCKFT 298
            +GD   E L+     +    I++W   LWIF+ KFT
Sbjct: 1454 IGDHITECLKEYSNPE---QIKQWRKNLWIFVSKFT 1486


>gi|476961|pir||A47392 chromodomain-helicase-DNA-binding protein,
            CHD-1 - mouse
          Length = 1711

 Score = 1021 bits (2639), Expect = 0.0
 Identities = 570/1236 (46%), Positives = 752/1236 (60%), Gaps = 63/1236 (5%)
 Frame = -1

Query: 3816 ETVERVIKWRHGVPGATGSATTCYNIADKGDPN-----DQIPGDKTEQQFFVKWTGWSHL 3652
            ET+ERV+  R G  GATG+ TT Y +   GDPN     ++ PGD    Q+ +KW GWSH+
Sbjct: 270  ETIERVMDCRVGRKGATGATTTIYAVEADGDPNAGFERNKEPGDI---QYLIKWKGWSHI 326

Query: 3651 HNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSADKEYIEFFECEQQMAEELCEEY 3472
            HNTWE+E +L   N +G+KK+ NY KK +E + W ++A  E +E++ C+Q++ ++L ++Y
Sbjct: 327  HNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQY 386

Query: 3471 KKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWEDEKMVAPEQ---IKAYYHRI 3301
            + VER++AH   +  A       +Y  KW GLPYS+C+WED  +++ +    I  Y+ R
Sbjct: 387  QIVERIIAHSNKQSAAG----LPDYYCKWQGLPYSECSWEDGALISKKFQTCIDEYFSRN 442

Query: 3300 ENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLNWMVYAWCKGNSS 3121
            ++  +P K+  VL++RP+F   +  P ++   G    +LRDYQL GLNW+ ++WCKGNS
Sbjct: 443  QSKTTPFKDCKVLKQRPRFVALKKQPSYI--GGHEGLELRDYQLNGLNWLAHSWCKGNSC 500

Query: 3120 ILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQWAPEMNLVVYM 2941
            ILADEMGLGKTIQ+IS L  LFH + L GP+L+VVPLST+ +WQ+E   WA +MN VVY+
Sbjct: 501  ILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYL 560

Query: 2940 GDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLSSIDWAALLVDEAHRLKND 2761
            GD+ SR+MIR +EW    TK++K N +LTTYEILLKDKAFL  ++WA + VDEAHRLKND
Sbjct: 561  GDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKND 620

Query: 2760 ESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKFDCWEEFETAHNESNHKG 2581
            +SLLYK+L  F+ NH+LLITGTPLQNSLKELW+LLHFIMPEKF  WE+FE  H +    G
Sbjct: 621  DSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYG 680

Query: 2580 ISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQFYKWILTKNYRELSKGVK 2401
             ++LHK+LEPFLLRRVKKDVEKSLP K EQILR++M+A QKQ+YKWILT+NY+ LSKG K
Sbjct: 681  YASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSK 740

Query: 2400 GSINGFVNLVMELKKCCNHASLTRQYD-HIYDDAQGXXXXXXXXXXXXXXXXXXXXXXXX 2224
            GS +GF+N++MELKKCCNH  L +  D + + + Q
Sbjct: 741  GSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRE 800

Query: 2223 XGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLL 2044
             G+RVLIFSQMV MLDIL EYL+ R+FP QRLDGS++ +LRKQALDH+NA GS DF FLL
Sbjct: 801  RGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLL 860

Query: 2043 STRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEI 1864
            STRAGGLGINLA+ADTV+IFDSDWNPQNDLQA +RAHRIGQ K VNIYRLVTKGSVEE+I
Sbjct: 861  STRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDI 920

Query: 1863 VERAKRKLVLDHLVIQRMDTTGKTVLSKNATASGSVPFDKQELSAILKFGAVXXXXX-XX 1687
            +ERAK+K+VLDHLVIQRMDTTGKTVL   +  S S PF+K+ELSAILKFGA
Sbjct: 921  LERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELSAILKFGAEELFKEPEG 980

Query: 1686 XXXXXXEVDIDRILMGAETREAEEEVMK-ENELLSSFKYANFAIDEEKDIAAATD----E 1522
                  E+DID IL  AET E E   +   +ELLS FK ANF+  +E DI    +
Sbjct: 981  EEQEPQEMDIDEILKRAETHENEPGPLSVGDELLSQFKVANFSNMDEDDIELEPERNSKN 1040

Query: 1521 WAAIIPEEDRNRILEEERMKELAEMNLAPRQRKQPIPQVVXXXXXXXXXXXXXXXXXXXX 1342
            W  IIPEE R R+ EEER KEL E+ + PR R     + +
Sbjct: 1041 WEEIIPEEQRRRLEEEERQKELEEIYMLPRMRN--CAKQISFNGSEGRRSRSRRYSGSDS 1098

Query: 1341 KAVG--------------------NFTIPEIKRFIKSFRKFSMPLNRLEEIAQDAELEEH 1222
             ++                      F+  EI+RFIKS++KF  PL RL+ IA+DAEL +
Sbjct: 1099 DSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAIARDAELVDK 1158

Query: 1221 STDEMKKLVESLSEACKKAADEFDSNEKNGDAGAAESEKKDIERKFKFHTCDVNLKQIER 1042
            S  ++++L E +   C KA    DS+     AG    + K     F+     VN K +
Sbjct: 1159 SETDLRRLGELVHNGCVKALK--DSSSGTERAGGRLGKVKG--PTFRISGVQVNAKLVIA 1214

Query: 1041 SHAELKPLHEILKSE-ETKTSFKPPANAKLQKGWDVDWSRPDDSALLLGVWKYGYGSWEA 865
               EL PLH+ + S+ E +  +  P + K    +D+DW + DDS LL+G+++YGYGSWE
Sbjct: 1215 HEDELIPLHKSIPSDPEERKQYTIPCHTKAAH-FDIDWGKEDDSNLLIGIYEYGYGSWEM 1273

Query: 864  IKMDPTLGLADKIFIKDKTKKPQGKNLQVRVDYLLKLMSXXXXXXXXXXXXXXXXXXVPV 685
            IKMDP L L  KI   D  KKPQ K LQ R DYL+KL+S
Sbjct: 1274 IKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSRDLAKREAQRLCGAGGSKRRK 1333

Query: 684  GPEKK-------------KRHTNNVPQEGXXXXXXXXXXKNSSSLKDQLALLSIDKSLYG 544
               KK             K  ++ +P E               S       +  D  ++
Sbjct: 1334 TRAKKSKAMKSIKVKEEIKSDSSPLPSEKSDEDDDKLNDSKPESKDRSKKSVVSDAPVHI 1393

Query: 543  GA----------LEDSSAKPFLECVKLCMPVHKYMKKLKEAQEAKNQADEAKY----LTR 406
             A           E+   K F  C +   PV   +K+L   ++  ++ ++ ++    L +
Sbjct: 1394 TASGEPVPIAEESEELDQKTFSICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIK 1453

Query: 405  LGDSFLENLETLIKKKPKTNIRKWYNYLWIFLCKFT 298
            +GD   E L+     +    I++W   LWIF+ KFT
Sbjct: 1454 IGDHITECLKEYSNPE---QIKQWRKNLWIFVSKFT 1486


>gi|4557447|ref|NP_001261.1| chromodomain helicase DNA binding protein
            1 [Homo sapiens]
 gi|3182949|sp|O14646|CHD1_HUMAN Chromodomain-helicase-DNA-binding
            protein 1 (CHD-1)
 gi|2645429|gb|AAB87381.1| CHD1 [Homo sapiens]
          Length = 1709

 Score = 1018 bits (2632), Expect = 0.0
 Identities = 566/1229 (46%), Positives = 748/1229 (60%), Gaps = 56/1229 (4%)
 Frame = -1

Query: 3816 ETVERVIKWRHGVPGATGSATTCYNIADKGDPNDQIPGDKT--EQQFFVKWTGWSHLHNT 3643
            ET+ER +  R G  GATG+ TT Y +   GDPN     +K   E Q+ +KW GWSH+HNT
Sbjct: 272  ETIERFMDCRIGRKGATGATTTIYAVEADGDPNAGFEKNKEPGEIQYLIKWKGWSHIHNT 331

Query: 3642 WESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSADKEYIEFFECEQQMAEELCEEYKKV 3463
            WE+E +L   N +G+KK+ NY KK +E + W ++A  E +E++ C+Q++ ++L ++Y+ V
Sbjct: 332  WETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIV 391

Query: 3462 ERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWEDEKMVAPEQ---IKAYYHRIENL 3292
             R++AH   +  A       +Y  KW GLPYS+C+WED  +++ +    I  Y+ R ++
Sbjct: 392  GRIIAHSNQKSAAG----YPDYYCKWQGLPYSECSWEDGALISKKFQACIDEYFSRNQSK 447

Query: 3291 KSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLNWMVYAWCKGNSSILA 3112
             +P K+  VL++RP+F   +  P ++   G    +LRDYQL GLNW+ ++WCKGNS ILA
Sbjct: 448  TTPFKDCKVLKQRPRFVALKKQPSYI--GGHEGLELRDYQLNGLNWLAHSWCKGNSCILA 505

Query: 3111 DEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQWAPEMNLVVYMGDV 2932
            DEMGLGKTIQ+IS L  LFH + L GP+L+VVPLST+ +WQ+E   WA +MN VVY+GD+
Sbjct: 506  DEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDI 565

Query: 2931 VSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLSSIDWAALLVDEAHRLKNDESL 2752
             SR+MIR +EW    TK++K N +LTTYEILLKDKAFL  ++WA + VDEAHRLKND+SL
Sbjct: 566  NSRNMIRTHEWTHHQTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSL 625

Query: 2751 LYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKFDCWEEFETAHNESNHKGISA 2572
            LYK+L  F+ NH+LLITGTPLQNSLKELW+LLHFIMPEKF  WE+FE  H +    G ++
Sbjct: 626  LYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYGYAS 685

Query: 2571 LHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQFYKWILTKNYRELSKGVKGSI 2392
            LHK+LEPFLLRRVKKDVEKSLP K EQILR++M+A QKQ+YKWILT+NY+ LSKG KGS
Sbjct: 686  LHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGST 745

Query: 2391 NGFVNLVMELKKCCNHASLTRQYD-HIYDDAQGXXXXXXXXXXXXXXXXXXXXXXXXXGH 2215
            +GF+N++MELKKCCNH  L +  D + + + Q                          G+
Sbjct: 746  SGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGN 805

Query: 2214 RVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTR 2035
            RVLIFSQMV MLDIL EYL+ R+FP QRLDGS++ +LRKQALDH+NA GS DF FLLSTR
Sbjct: 806  RVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTR 865

Query: 2034 AGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVER 1855
            AGGLGINLA+ADTV+IFDSDWNPQNDLQA +RAHRIGQ K VNIYRLVTKGSVEE+I+ER
Sbjct: 866  AGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILER 925

Query: 1854 AKRKLVLDHLVIQRMDTTGKTVLSKNATASGSVPFDKQELSAILKFGAVXXXXX-XXXXX 1678
            AK+K+VLDHLVIQRMDTTGKTVL   +  S S PF+K+ELSAILKFGA
Sbjct: 926  AKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELSAILKFGAEELFKEPEGEEQ 985

Query: 1677 XXXEVDIDRILMGAETREAEE-EVMKENELLSSFKYANFAIDEEKDIAAATD----EWAA 1513
               E+DID IL  AET E E   +   +ELLS FK ANF+  +E DI    +     W
Sbjct: 986  EPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKVANFSNMDEDDIELEPERNSKNWEE 1045

Query: 1512 IIPEEDRNRILEEERMKELAEMNLAPRQRKQPIPQVVXXXXXXXXXXXXXXXXXXXXKAV 1333
            IIPE+ R R+ EEER KEL E+ + PR R                             +
Sbjct: 1046 IIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSISE 1105

Query: 1332 G------------------NFTIPEIKRFIKSFRKFSMPLNRLEEIAQDAELEEHSTDEM 1207
            G                   F+  EI+RFIKS++KF  PL RL+ IA+DAEL + S  ++
Sbjct: 1106 GKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAIARDAELVDKSETDL 1165

Query: 1206 KKLVESLSEACKKAADEFDSNEKNGDAGAAESEKKDIERKFKFHTCDVNLKQIERSHAEL 1027
            ++L E +   C KA    DS+      G    + K     F+     VN K +     EL
Sbjct: 1166 RRLGELVHNGCIKALK--DSSSGTERTGGRLGKVKG--PTFRISGVQVNAKLVISHEEEL 1221

Query: 1026 KPLHEILKSE-ETKTSFKPPANAKLQKGWDVDWSRPDDSALLLGVWKYGYGSWEAIKMDP 850
             PLH+ + S+ E +  +  P + K    +D+DW + DDS LL+G+++YGYGSWE IKMDP
Sbjct: 1222 IPLHKSIPSDPEERKQYTIPCHTKAAH-FDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDP 1280

Query: 849  TLGLADKIFIKDKTKKPQGKNLQVRVDYLLKLMSXXXXXXXXXXXXXXXXXXVPVGPEKK 670
             L L  KI   D  KKPQ K LQ R DYL+KL+S                       + K
Sbjct: 1281 DLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSRDLAKKEALSGAGSSKRRKARAKKNK 1340

Query: 669  -----------KRHTNNVPQEGXXXXXXXXXXKNSS----SLKDQLALLSIDKSLYGGAL 535
                       K  ++ +P E             S     S K  ++   +  +  G  +
Sbjct: 1341 AMKSIKVKEEIKSDSSPLPSEKSDEDDDKLSESKSDGRERSKKSSVSDAPVHITASGEPV 1400

Query: 534  ------EDSSAKPFLECVKLCMPVHKYMKKLKEAQEAKNQADEAKY----LTRLGDSFLE 385
                  E+   K F  C +   PV   +K+L   ++  ++ ++ ++    L ++GD   E
Sbjct: 1401 PISEESEELDQKTFSICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITE 1460

Query: 384  NLETLIKKKPKTNIRKWYNYLWIFLCKFT 298
             L+     +    I++W   LWIF+ KFT
Sbjct: 1461 CLKEYTNPE---QIKQWRKNLWIFVSKFT 1486


>gi|45384402|ref|NP_990272.1| chromo-helicase-DNA-binding on the Z
            chromosome protein [Gallus gallus]
 gi|2501846|gb|AAC60282.1| chromo-helicase-DNA-binding on the Z
            chromosome protein [Gallus gallus]
          Length = 1808

 Score = 1012 bits (2617), Expect = 0.0
 Identities = 536/1055 (50%), Positives = 696/1055 (65%), Gaps = 32/1055 (3%)
 Frame = -1

Query: 3816 ETVERVIKWRHGVPGATGSATTCYNIADKGDPNDQIPGDKT--EQQFFVKWTGWSHLHNT 3643
            ET+E+ +  R G  GATG++TT Y +   GDPN      K   E Q+ +KW GWSH+HNT
Sbjct: 269  ETIEKFMDSRIGRKGATGASTTIYAVEADGDPNAGFEKSKELGEIQYLIKWKGWSHIHNT 328

Query: 3642 WESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSADKEYIEFFECEQQMAEELCEEYKKV 3463
            WE+E +L   N KG+ K+ NY KK +E + W ++A  E +E++ C+Q++ ++L ++Y+ V
Sbjct: 329  WETEETLKQQNVKGMNKLDNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIV 388

Query: 3462 ERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWEDEKMVAPE---QIKAYYHRIENL 3292
            ER++AH   +  A       +Y  KW GLPYS+C+WED  ++A +   +I  Y+ R ++
Sbjct: 389  ERIIAHSNQKSAAG----YPDYYCKWQGLPYSECSWEDGALIAKKFQARIDEYFSRNQSK 444

Query: 3291 KSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLNWMVYAWCKGNSSILA 3112
             +P K+  VL++RP+F   +  P ++   G  + +LRDYQL GLNW+ ++WCKGNS ILA
Sbjct: 445  TTPFKDCKVLKQRPRFVALKKQPSYI--GGHESLELRDYQLNGLNWLAHSWCKGNSCILA 502

Query: 3111 DEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQWAPEMNLVVYMGDV 2932
            DEMGLGKTIQ+IS L  LFH + L GP+L+ VPLST+ +WQ+E   WAP+MN VVY+GD+
Sbjct: 503  DEMGLGKTIQTISFLNYLFHEHQLYGPFLLRVPLSTLTSWQREIQTWAPQMNAVVYLGDI 562

Query: 2931 VSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLSSIDWAALLVDEAHRLKNDESL 2752
             SR+MIR +EW    TK++K N +LTTYEILLKDK+FL  ++WA + VDEAHRLKND+SL
Sbjct: 563  TSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLGGLNWAFIGVDEAHRLKNDDSL 622

Query: 2751 LYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKFDCWEEFETAHNESNHKGISA 2572
            LY++L  F+ NH+LLITGTPLQNSLKELW+LLHFIMPEKF  WE+FE  H +    G ++
Sbjct: 623  LYRTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYGYAS 682

Query: 2571 LHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQFYKWILTKNYRELSKGVKGSI 2392
            LHK+LEPFLLRRVKKDVEKSLP K EQILR++M+A QKQ+YKWILT+NY+ LSKG KGS
Sbjct: 683  LHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGST 742

Query: 2391 NGFVNLVMELKKCCNHASLTR-QYDHIYDDAQGXXXXXXXXXXXXXXXXXXXXXXXXXGH 2215
            +GF+N++MELKKCCNH  L +   D+ + + Q                          G+
Sbjct: 743  SGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGN 802

Query: 2214 RVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTR 2035
            RVLIFSQMV MLDIL EYL+ R+FP QRLDGS++ +LRKQALDH+NA GS DF FLLSTR
Sbjct: 803  RVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTR 862

Query: 2034 AGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVER 1855
            AGGLGINLA+ADTV+IFDSDWNPQNDLQA +RAHRIGQ K VNIYRLVTKGSVEE+I+ER
Sbjct: 863  AGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILER 922

Query: 1854 AKRKLVLDHLVIQRMDTTGKTVLSKNATASGSVPFDKQELSAILKFGAVXXXXX-XXXXX 1678
            AK+K+VLDHLVIQRMDTTGKTVL   +T S S PF+K+ELSAILKFGA
Sbjct: 923  AKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILKFGAEELFKEPEGEEQ 982

Query: 1677 XXXEVDIDRILMGAETREAEE-EVMKENELLSSFKYANFAIDEEKDIAAATD----EWAA 1513
               E+DID IL  AETRE E   +   +ELLS FK ANF+  +E DI    +     W
Sbjct: 983  EPQEMDIDEILKRAETRENEPGPLTVGDELLSQFKVANFSNMDEDDIELEPERNSRNWEE 1042

Query: 1512 IIPEEDRNRILEEERMKELAEMNLAPRQRKQPIPQVVXXXXXXXXXXXXXXXXXXXXKA- 1336
            IIPE  R RI EEER KEL E+ + PR R     Q+
Sbjct: 1043 IIPESQRRRIEEEERQKELEEIYMLPRMR-NCAKQISFNGSEGRRSRSRRYSGSDSDSIT 1101

Query: 1335 ------------------VGNFTIPEIKRFIKSFRKFSMPLNRLEEIAQDAELEEHSTDE 1210
                              +  F+  EI+RFIKS++KF  PL RL+ +A+DAEL + S  +
Sbjct: 1102 ERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAVARDAELVDKSETD 1161

Query: 1209 MKKLVESLSEACKKAADEFDSNEKNGDAGAAESEKKDIERKFKFHTCDVNLKQIERSHAE 1030
            +++L E +   C KA  +  S ++   AG    + K     F+     VN K +     E
Sbjct: 1162 LRRLGELVHNGCIKALKDNSSGQER--AGGRLGKVKG--PTFRISGVQVNAKLVISHEEE 1217

Query: 1029 LKPLHEILKSE-ETKTSFKPPANAKLQKGWDVDWSRPDDSALLLGVWKYGYGSWEAIKMD 853
            L PLH+ + S+ E +  +  P + K    +D+DW + DDS LL+G+++YGYGSWE IKMD
Sbjct: 1218 LAPLHKSIPSDPEERKRYVIPCHTKAAH-FDIDWGKEDDSNLLVGIYEYGYGSWEMIKMD 1276

Query: 852  PTLGLADKIFIKDKTKKPQGKNLQVRVDYLLKLMS 748
            P L L  KI   D  KKPQ K LQ R DYL+KL++
Sbjct: 1277 PDLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLN 1311



 Score = 37.7 bits (86), Expect = 2.5
 Identities = 22/83 (26%), Positives = 41/83 (48%), Gaps = 4/83 (4%)
 Frame = -1

Query: 534  EDSSAKPFLECVKLCMPVHKYMKKLKEAQEAKNQADEAKY----LTRLGDSFLENLETLI 367
            E+   K F  C +   PV   +K+L   ++  ++ ++ ++    L ++GD   E L+
Sbjct: 1497 EELHQKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYT 1556

Query: 366  KKKPKTNIRKWYNYLWIFLCKFT 298
              +    I++W   LWIF+ KFT
Sbjct: 1557 NPE---QIKQWRKNLWIFVSKFT 1576


>gi|4557449|ref|NP_001262.1| chromodomain helicase DNA binding protein
            2 [Homo sapiens]
 gi|3182950|sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding
            protein 2 (CHD-2)
 gi|2645431|gb|AAB87382.1| CHD2 [Homo sapiens]
          Length = 1739

 Score = 1012 bits (2617), Expect = 0.0
 Identities = 540/1067 (50%), Positives = 697/1067 (64%), Gaps = 44/1067 (4%)
 Frame = -1

Query: 3819 TETVERVIKWRHGVPGATGSATTCYNIADKGDPNDQIPGDKTEQ--QFFVKWTGWSHLHN 3646
            +ET+E+V+  R G  GATG++TT Y I   GDP+     +K E   Q+ +KW GWS++H+
Sbjct: 260  SETIEKVLDSRLGKKGATGASTTVYAIEANGDPSGDFDTEKDEGEIQYLIKWKGWSYIHS 319

Query: 3645 TWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSADKEYIEFFECEQQMAEELCEEYKK 3466
            TWESE SL     KGLKK++N+ KK+ E++ W      E +E+F C+Q++A EL ++Y+
Sbjct: 320  TWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNCQQELASELNKQYQI 379

Query: 3465 VERVVAHQTSRD-----------RAADGSMATEYLIKWSGLPYSDCTWEDEKMVAPEQ-- 3325
            VERV+A +TS+            R    S   EYL KW GLPYS+C+WEDE ++  +
Sbjct: 380  VERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSECSWEDEALIGKKFQN 439

Query: 3324 -IKAYYHRIENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLNWMV 3148
             I +++ R  +   P +    L++RP+F   +  P +L   G    +LRDYQLEGLNW+
Sbjct: 440  CIDSFHSRNNSKTIPTRECKALKQRPRFVALKKQPAYL---GGENLELRDYQLEGLNWLA 496

Query: 3147 YAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQWA 2968
            ++WCK NS ILADEMGLGKTIQ+IS L+ LFH++ L GP+L+VVPLST+ +WQ+EF  WA
Sbjct: 497  HSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLSTLTSWQREFEIWA 556

Query: 2967 PEMNLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLSSIDWAALLV 2788
            PE+N+VVY+GD++SR+ IR+YEW    TK++K NA++TTYEILLKDK  L SI+WA L V
Sbjct: 557  PEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLKDKTVLGSINWAFLGV 616

Query: 2787 DEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKFDCWEEFET 2608
            DEAHRLKND+SLLYK+L  F+ NH+LLITGTPLQNSLKELW+LLHFIMPEKF+ WE+FE
Sbjct: 617  DEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEE 676

Query: 2607 AHNESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQFYKWILTKN 2428
             H +    G  +LHK LEPFLLRRVKKDVEKSLP K EQILRV+M+A QKQ+YKWILT+N
Sbjct: 677  DHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRN 736

Query: 2427 YRELSKGVKGSINGFVNLVMELKKCCNHASLTR-QYDHIYDDAQGXXXXXXXXXXXXXXX 2251
            Y+ L+KG +GS +GF+N+VMELKKCCNH  L +   ++  ++ Q
Sbjct: 737  YKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILL 796

Query: 2250 XXXXXXXXXXGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAP 2071
                      G+RVLIFSQMV MLDIL EYL ++ +P QRLDGS++ ++RKQALDH+NA
Sbjct: 797  DKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNAD 856

Query: 2070 GSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLV 1891
            GS DF FLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA +RAHRIGQ K VNIYRLV
Sbjct: 857  GSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLV 916

Query: 1890 TKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTVLSKNATASGSVPFDKQELSAILKFGA 1711
            TKG+VEEEI+ERAK+K+VLDHLVIQRMDTTG+T+L  N+  S S PF+K+EL+AILKFGA
Sbjct: 917  TKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTILENNSGRSNSNPFNKEELTAILKFGA 976

Query: 1710 VXXXXXXXXXXXX-XEVDIDRILMGAETREAEEEVMKENELLSSFKYANFAI--DEEKDI 1540
                           E+DID IL  AETRE E      +ELLS FK ANFA   DEE+
Sbjct: 977  EDLFKELEGEESEPQEMDIDEILRLAETRENEVSTSATDELLSQFKVANFATMEDEEELE 1036

Query: 1539 AAATDEWAAIIPEEDRNRILEEERMKELAEMNLAPR-----------------------Q 1429
                 +W  IIPEE R ++ EEER KEL E+ + PR                       Q
Sbjct: 1037 ERPHKDWDEIIPEEQRKKVEEEERQKELEEIYMLPRIRSSTKKAQTNDSDSDTESKRQAQ 1096

Query: 1428 RKQPIPQVVXXXXXXXXXXXXXXXXXXXXKAVGNFTIPEIKRFIKSFRKFSMPLNRLEEI 1249
            R                              V  FT  EI+RFIK+++KF +PL RLE +
Sbjct: 1097 RSSASESETEDSDDDKKPKRRGRPRSVRKDLVEGFTDAEIRRFIKAYKKFGLPLERLECL 1156

Query: 1248 AQDAELEEHSTDEMKKLVESLSEACKKAADEFDSNEKNGDAGAAESEKKDIERKFKFHTC 1069
            A+DAEL + S  ++K+L E +  +C  A  E++   K  +A   +   K      K
Sbjct: 1157 ARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQLKE-NASEGKGPGKRRGPTIKISGV 1215

Query: 1068 DVNLKQIERSHAELKPLHEILKSE-ETKTSFKPPANAKLQKGWDVDWSRPDDSALLLGVW 892
             VN+K I +   E + LH+ +  + E K  +      K    +DV+W   DDS LLLG++
Sbjct: 1216 QVNVKSIIQHEEEFEMLHKSIPVDPEEKKKYCLTCRVKAAH-FDVEWGVEDDSRLLLGIY 1274

Query: 891  KYGYGSWEAIKMDPTLGLADKIFIKDKTKKPQGKNLQVRVDYLLKLM 751
            ++GYG+WE IK DP L L DKI   +  KKPQGK LQ R DYLLKL+
Sbjct: 1275 EHGYGNWELIKTDPELKLTDKILPVETDKKPQGKQLQTRADYLLKLL 1321



 Score = 38.5 bits (88), Expect = 1.5
 Identities = 23/83 (27%), Positives = 42/83 (49%), Gaps = 4/83 (4%)
 Frame = -1

Query: 534  EDSSAKPFLECVKLCMPVHKYMKKLKEAQEAKNQADEAKY----LTRLGDSFLENLETLI 367
            +D   + F  C +   PV K +K+L +  +  N  ++ ++    L ++GD   E L+
Sbjct: 1462 DDLDQETFSICKERMRPVKKALKQLDKPDKGLNVQEQLEHTRNCLLKIGDRIAECLKAYS 1521

Query: 366  KKKPKTNIRKWYNYLWIFLCKFT 298
             ++   +I+ W   LWIF+ KFT
Sbjct: 1522 DQE---HIKLWRRNLWIFVSKFT 1541


>gi|28975395|gb|AAO61783.1| chromo-helicase DNA-binding protein
            [Taeniopygia guttata]
          Length = 1806

 Score = 1012 bits (2616), Expect = 0.0
 Identities = 538/1056 (50%), Positives = 696/1056 (64%), Gaps = 33/1056 (3%)
 Frame = -1

Query: 3816 ETVERVIKWRHGVPGATGSATTCYNIADKGDPNDQIPGDK--TEQQFFVKWTGWSHLHNT 3643
            ET+E+ +  R G  GATG+ATT Y +   GDPN      K   E Q+ +KW GWSH+HNT
Sbjct: 273  ETIEKFMDSRVGRKGATGAATTIYAVEADGDPNAGFEKSKEPAEVQYLIKWKGWSHIHNT 332

Query: 3642 WESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSADKEYIEFFECEQQMAEELCEEYKKV 3463
            WE+E +L   N KG+KK+ NY KK +E + W ++A  E +E++ C+Q++ ++L ++Y+ V
Sbjct: 333  WETEETLKQQNVKGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIV 392

Query: 3462 ERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWEDEKMVAPE---QIKAYYHRIENL 3292
            ER++AH   +  A       +Y  KW GLPYS+C+WED  ++A +   +I  Y+ R ++
Sbjct: 393  ERIIAHSNQKSAAG----YPDYYCKWQGLPYSECSWEDGALIAKKFQARIDEYFSRNQSK 448

Query: 3291 KSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLNWMVYAWCKGNSSILA 3112
             +P K+  VL++RP+F   +  P ++   G  +  LRDYQL GLNW+ ++WCKGNS ILA
Sbjct: 449  TTPFKDCKVLKQRPRFVALKKQPSYI--GGHESLGLRDYQLNGLNWLAHSWCKGNSCILA 506

Query: 3111 DEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQWAPEMNLVVYMGDV 2932
            DEMGLGKTIQ+IS L  LFH + L GP+L+VVPLST+ +WQ+E    AP+MN VVY+GD+
Sbjct: 507  DEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTRAPQMNAVVYLGDI 566

Query: 2931 VSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLSSIDWAALLVDEAHRLKNDESL 2752
             SR+MIR +EW    TK++K N +LTTYEILLKDK+FL  ++WA + VDEAHRLKND+SL
Sbjct: 567  TSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLGGLNWAFIGVDEAHRLKNDDSL 626

Query: 2751 LYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKFDCWEEFETAHNESNHKGISA 2572
            LYK+L  F+ NH+LLITGTPLQNSLKELW+LLHFIMPEKF  WE+FE  H +    G ++
Sbjct: 627  LYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYGYAS 686

Query: 2571 LHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQFYKWILTKNYRELSKGVKGSI 2392
            LHK+LEPFLLRRVKKDVEKSLP K EQILR++M+A QKQ+YKWILT NY+ LSKG KGS
Sbjct: 687  LHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTGNYKALSKGSKGST 746

Query: 2391 NGFVNLVMELKKCCNHASLTR-QYDHIYDDAQGXXXXXXXXXXXXXXXXXXXXXXXXXGH 2215
            +GF+N++MELKKCCNH  L +   D+ + + Q                          G+
Sbjct: 747  SGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGN 806

Query: 2214 RVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTR 2035
            RVLIFSQMV MLDIL EYL+ R+FP QRLDGS++ +LRKQALDH+NA GS DF FLLSTR
Sbjct: 807  RVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTR 866

Query: 2034 AGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVER 1855
            AGGLGINLA+ADTV+IFDSDWNPQNDLQA +RAHRIGQ K VNIYRLVTKGSVEE+I+ER
Sbjct: 867  AGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILER 926

Query: 1854 AKRKLVLDHLVIQRMDTTGKTVLSKNATASGSVPFDKQELSAILKFGAVXXXXX-XXXXX 1678
            AK+K+VLDHLVIQRMDTTGKTVL   +T S S PF+K+ELSAILKFGA
Sbjct: 927  AKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILKFGAEELFKEPEGEEQ 986

Query: 1677 XXXEVDIDRILMGAETREAEE-EVMKENELLSSFKYANFAIDEEKDIAAATD----EWAA 1513
               E+DID IL  AETRE E   +   +ELLS FK ANF+  +E DI    +     W
Sbjct: 987  EPQEMDIDEILKRAETRENEPGPLTVGDELLSQFKVANFSNMDEDDIELEPERNSRNWEE 1046

Query: 1512 IIPEEDRNRILEEERMKELAEMNLAPRQRKQPIPQVVXXXXXXXXXXXXXXXXXXXXKAV 1333
            IIPE  R RI EEER KEL E+ + PR R     + +                     ++
Sbjct: 1047 IIPEVQRRRIEEEERQKELEEIYMLPRMRN--CAKQISFNGSEGRRSRSRRYSGSDSDSI 1104

Query: 1332 G--------------------NFTIPEIKRFIKSFRKFSMPLNRLEEIAQDAELEEHSTD 1213
                                  F+  EI+RFIKS++KF  PL RL+ +A+DAEL + S
Sbjct: 1105 SERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAVARDAELVDKSET 1164

Query: 1212 EMKKLVESLSEACKKAADEFDSNEKNGDAGAAESEKKDIERKFKFHTCDVNLKQIERSHA 1033
            ++++L E +   C KA  +  S ++   AG    + K     F+     VN K +
Sbjct: 1165 DLRRLGELVHNGCIKALKDNSSGQER--AGGRLGKVKG--PTFRISGVQVNAKLVISHEE 1220

Query: 1032 ELKPLHEILKSE-ETKTSFKPPANAKLQKGWDVDWSRPDDSALLLGVWKYGYGSWEAIKM 856
            EL PLH+ + S+ E +  +  P + K    +D+DW + DDS LL+G+++YGYGSWE IKM
Sbjct: 1221 ELAPLHKSIPSDPEERKRYVIPCHTKAAH-FDIDWGKEDDSNLLIGIYEYGYGSWEMIKM 1279

Query: 855  DPTLGLADKIFIKDKTKKPQGKNLQVRVDYLLKLMS 748
            DP L L  KI   D  KKPQ K LQ R DYL+KL++
Sbjct: 1280 DPDLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLN 1315



 Score = 38.1 bits (87), Expect = 1.9
 Identities = 22/83 (26%), Positives = 41/83 (48%), Gaps = 4/83 (4%)
 Frame = -1

Query: 534  EDSSAKPFLECVKLCMPVHKYMKKLKEAQEAKNQADEAKY----LTRLGDSFLENLETLI 367
            E+   K F  C +   PV   +K+L   ++  ++ ++ ++    L ++GD   E L+
Sbjct: 1496 EELDQKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYT 1555

Query: 366  KKKPKTNIRKWYNYLWIFLCKFT 298
              +    I++W   LWIF+ KFT
Sbjct: 1556 NPE---QIKQWRKNLWIFVSKFT 1575


>gi|28975391|gb|AAO61781.1| chromo-helicase DNA-binding protein
            [Taeniopygia guttata]
 gi|28975393|gb|AAO61782.1| chromo-helicase DNA-binding protein
            [Taeniopygia guttata]
          Length = 1786

 Score = 1008 bits (2607), Expect = 0.0
 Identities = 535/1058 (50%), Positives = 693/1058 (64%), Gaps = 35/1058 (3%)
 Frame = -1

Query: 3816 ETVERVIKWRHGVPGATGSATTCYNIADKGDPNDQIPGDKT--EQQFFVKWTGWSHLHNT 3643
            ET+E+ +  R G  GATG+ATT Y +   GDPN      K   E Q+ +KW GWSH+HNT
Sbjct: 254  ETIEKFMDSRIGRKGATGAATTIYAVEADGDPNTGFEKSKEPGEIQYLIKWKGWSHIHNT 313

Query: 3642 WESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSADKEYIEFFECEQQMAEELCEEYKKV 3463
            WE+E +L   N KG+KK+ NY KK +E + W ++A  E +E++ C+Q++ ++L ++Y+ V
Sbjct: 314  WETEETLKQQNVKGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIV 373

Query: 3462 ERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWEDEKMVAPEQ---IKAYYHRIENL 3292
            ER++AH   +  A       +Y  KW GLPYS+C+WED  ++A +    I  Y+ R ++
Sbjct: 374  ERIIAHSNQKSAAG----YPDYYCKWQGLPYSECSWEDGALIAKKFQTCIDEYFSRNQSK 429

Query: 3291 KSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLNWMVYAWCKGNSSILA 3112
             +P K+  +L++RP+F   +  P ++   G    +LRDYQL GLNW+ ++WCKGNS ILA
Sbjct: 430  TTPFKDCKILKQRPRFVALKKQPSYI--GGHEGLELRDYQLNGLNWLAHSWCKGNSCILA 487

Query: 3111 DEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQWAPEMNLVVYMGDV 2932
            DEMGLGKTIQ+IS L  LFH + L GP+L+VVPLST+ +WQ+E   WAP+MN VVY+GD+
Sbjct: 488  DEMGLGKTIQTISFLNHLFHEHQLYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDI 547

Query: 2931 VSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLSSIDWAALLVDEAHRLKNDESL 2752
             SR+MIR +EW    TK++K N +LTTYEILLKDK+FL  ++W  + VDEAHRLKND+SL
Sbjct: 548  TSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLGGLNWVFIGVDEAHRLKNDDSL 607

Query: 2751 LYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKFDCWEEFETAHNESNHKGISA 2572
            LYK+L  F+ NH+LLITGTPLQNSLK+LW+LLHFIMPEKF  WE+FE  H +    G ++
Sbjct: 608  LYKTLIDFKSNHRLLITGTPLQNSLKKLWSLLHFIMPEKFSSWEDFEEEHGKGREFGYAS 667

Query: 2571 LHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQFYKWILTKNYRELSKGVKGSI 2392
            LHK+LEPFLLRRVKKDVEKSLP K EQILR++M+A QKQ+YKWILT+NY+ LSKG KGS
Sbjct: 668  LHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGST 727

Query: 2391 NGFVNLVMELKKCCNHASLTR-QYDHIYDDAQGXXXXXXXXXXXXXXXXXXXXXXXXXGH 2215
            +GF+N++MELKKCCNH  L +   D+ + + Q                          G+
Sbjct: 728  SGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRECGN 787

Query: 2214 RVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTR 2035
            RVLIFSQMV MLDIL EYL+ R+FP QRLDGS++ +LRKQALDH+NA GS DF FLLSTR
Sbjct: 788  RVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTR 847

Query: 2034 AGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVER 1855
            AGGLGINLA+ADTV+IFDSDWNPQNDLQA +RAHRIGQ K VNIYRLVTK SVEE+I+ER
Sbjct: 848  AGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKASVEEDILER 907

Query: 1854 AKRKLVLDHLVIQRMDTTGKTVLSKNATASGSVPFDKQELSAILKFGAVXXXXX-XXXXX 1678
            AK+K+VLDHLVIQRMDTTGKTVL   +T S S PF+K+ELSAILKFGA
Sbjct: 908  AKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILKFGAEELFKEPEGEEE 967

Query: 1677 XXXEVDIDRILMGAETREAEE-EVMKENELLSSFKYANFAIDEEKDIAAATDE----WAA 1513
               E+DID IL  AETRE E   +   +ELLS FK ANF+  +E DI    ++    W
Sbjct: 968  EPQEMDIDEILKRAETRENEPGPLTVGDELLSQFKVANFSNMDEDDIELEPEQNLRNWEE 1027

Query: 1512 IIPEEDRNRILEEERMKELAEMNLAPRQRKQPIPQVVXXXXXXXXXXXXXXXXXXXXKAV 1333
            IIPE  R RI EEER KEL E+ + PR R     + +                     +V
Sbjct: 1028 IIPEVQRRRIEEEERQKELEEIYMLPRMRN--CAKQISFNGSEGKHSRRRRYSGSDSDSV 1085

Query: 1332 G--------------------NFTIPEIKRFIKSFRKFSMPLNRLEEIAQDAELEEHSTD 1213
                                  F+  EI+RFIKS++KF  PL RL+ IA+DAEL + S
Sbjct: 1086 SERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAIARDAELVDKSEI 1145

Query: 1212 EMKKLVESLSEACKKAA--DEFDSNEKNGDAGAAESEKKDIERKFKFHTCDVNLKQIERS 1039
            ++++L E +   C KA   + F      G  G  +         F+     VN K +
Sbjct: 1146 DLRRLGELVHNGCIKALKDNSFGQERAGGRFGKVKGP------TFRISGVQVNAKLVISH 1199

Query: 1038 HAELKPLHEILKSE-ETKTSFKPPANAKLQKGWDVDWSRPDDSALLLGVWKYGYGSWEAI 862
              EL PLH+ + ++ E +  +  P + K    +D+DW + DDS LL+G+++YGYGSWE I
Sbjct: 1200 EEELAPLHKSIPADPEERKRYVIPCHTKAAH-FDIDWGKEDDSNLLIGIYEYGYGSWEMI 1258

Query: 861  KMDPTLGLADKIFIKDKTKKPQGKNLQVRVDYLLKLMS 748
            KMDP L L  KI   D  KKPQ K LQ R DYL+KL++
Sbjct: 1259 KMDPDLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLN 1296



 Score = 37.0 bits (84), Expect = 4.3
 Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
 Frame = -1

Query: 534  EDSSAKPFLECVKLCMPVHKYMKKLKEAQEAKNQADEAKY----LTRLGDSFLENLETLI 367
            E+   + F  C +   PV   +K+L   ++  ++ ++ ++    L ++GD   E L+
Sbjct: 1476 EELDQRTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKDYT 1535

Query: 366  KKKPKTNIRKWYNYLWIFLCKFT 298
              +    I++W   LWIF+ KFT
Sbjct: 1536 NPE---QIKQWRKNLWIFVSKFT 1555


>gi|17137266|ref|NP_477197.1| CG3733-PA [Drosophila melanogaster]
 gi|7295870|gb|AAF51170.1| CG3733-PA [Drosophila melanogaster]
          Length = 1883

 Score =  971 bits (2510), Expect = 0.0
 Identities = 540/1100 (49%), Positives = 701/1100 (63%), Gaps = 61/1100 (5%)
 Frame = -1

Query: 3867 EWDEEPAVPAEGPAI---LTETVERVIKWRHGVPGATGSATTCYNIADKG-DPN-----D 3715
            E+DE  A      A      ET+ER++  R G  G TG+ TT Y I + G DP+
Sbjct: 298  EYDESQAATTAATAEEEEKCETIERILAQRAGKRGCTGNQTTIYAIEENGFDPHAGFDEK 357

Query: 3714 QIPGDKTEQQFFVKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSAD 3535
            Q P  +TE QF +KW GWS++HNTWESE +L  M AKG+KK+ N++KK+KE   W+R A
Sbjct: 358  QTPDAETEAQFLIKWKGWSYIHNTWESEATLRDMKAKGMKKLDNFIKKEKEQAYWRRYAG 417

Query: 3534 KEYIEFFECEQQMAEELCEEYKKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTW 3355
             E I++FEC+ ++  EL + Y  V+R++A  +  D   DG+   EYL KW  LPY++ TW
Sbjct: 418  PEDIDYFECQLELQHELLKSYNNVDRIIAKGSKPD---DGT--EEYLCKWQSLPYAESTW 472

Query: 3354 EDEKMVAPEQIKA---YYHRIENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKL 3184
            ED  +V  +  +    +  R  +  +P+++  V++ RPKF + ++ P+FL     S   L
Sbjct: 473  EDAALVLRKWQRCAEQFNDRESSKCTPSRHCRVIKYRPKFSRIKNQPEFLS----SGLTL 528

Query: 3183 RDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLST 3004
            RDYQ++GLNW++++WCK NS ILADEMGLGKTIQ+I  L SLF  + L GP+L VVPLST
Sbjct: 529  RDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLYGPFLCVVPLST 588

Query: 3003 MAAWQKEFAQWAPEMNLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKA 2824
            M AWQ+EF  WAP+MN+V Y+GD+ SR++I+QYEW    +K++K N ILTTYEI+LKDK
Sbjct: 589  MTAWQREFDLWAPDMNVVTYLGDIKSRELIQQYEWQFESSKRLKFNCILTTYEIVLKDKQ 648

Query: 2823 FLSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIM 2644
            FL ++ WAALLVDEAHRLKND+SLLYKSL +F  NH+LLITGTPLQNSLKELWALLHFIM
Sbjct: 649  FLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLHFIM 708

Query: 2643 PEKFDCWEEFETAHNESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAH 2464
            P+KFD WE FE  H  +  KG + LH++LEP++LRRVKKDVEKSLP K EQILRV+MT+
Sbjct: 709  PDKFDTWENFEVQHGNAEDKGYTRLHQQLEPYILRRVKKDVEKSLPAKVEQILRVEMTSL 768

Query: 2463 QKQFYKWILTKNYRELSKGVKGSINGFVNLVMELKKCCNHASLTR--QYDHIYDDAQGXX 2290
            QKQ+YKWILTKN+  L KG +GS + F+N+V+ELKKCCNHA+L R  +++ +
Sbjct: 769  QKQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDEAL 828

Query: 2289 XXXXXXXXXXXXXXXXXXXXXXXGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRA 2110
                                   GHRVLIFSQMV MLD+L +YLQ R FP QRLDGS++
Sbjct: 829  QTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKG 888

Query: 2109 DLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHR 1930
            ++R+QALDH+NA GS DF FLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQA +RAHR
Sbjct: 889  EMRRQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHR 948

Query: 1929 IGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTVLSK--NATASGSV 1756
            IGQ   VNIYRLVT  SVEE+IVERAK+K+VLDHLVIQRMDTTG+TVL K  N  +S S
Sbjct: 949  IGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSGNGHSSNSN 1008

Query: 1755 PFDKQELSAILKFGAVXXXXXXXXXXXXXEVDIDRILMGAETREAEEEVMKENELLSSFK 1576
            PF+K +LSAILKFGA                DID IL  AETR  + E M  ++LLS+FK
Sbjct: 1009 PFNKDDLSAILKFGAEELFKDEQEHDDDLVCDIDEILRRAETRNEDPE-MPADDLLSAFK 1067

Query: 1575 YANFAIDEE--------KDIAAATDE-----WAAIIPEEDRNRILEEERMKELAEMNLAP 1435
             A+ A  EE        +D  AA +E     W  IIPE  R  I ++ER KE+ ++ L P
Sbjct: 1068 VASIAAFEEEPSDSVSKQDQNAAGEEDDSKDWDDIIPEGFRKAIDDQERAKEMEDLYLPP 1127

Query: 1434 RQR------------------KQPIPQ-------VVXXXXXXXXXXXXXXXXXXXXKAVG 1330
            R++                  KQ            +                    + +
Sbjct: 1128 RRKTAANQNEGKRGAGKGGKGKQQADDSGGDSDYELGSDGSGDDGRPRKRGRPTMKEKIT 1187

Query: 1329 NFTIPEIKRFIKSFRKFSMPLNRLEEIAQDAELEEHSTDEMKKLVESLSEACKKAADEFD 1150
             FT  E++RFI+S++KF  PL+R+E IA DAEL+E    E+K+L E L + C +   E
Sbjct: 1188 GFTDAELRRFIRSYKKFPAPLHRMEAIACDAELQEKPLAELKRLGEMLHDRCVQFLHEHK 1247

Query: 1149 SNEK----NGDAGAAESEKKDIERKFKFHTCDVNLKQIERSHAELKPLHEILKS---EET 991
              E       +   A+  +       K      N K++     EL+PL+EI+ S   E
Sbjct: 1248 EEESKTAATDETPGAKQRRARATFSVKLGGVSFNAKKLLACEQELQPLNEIMPSMPEERQ 1307

Query: 990  KTSFKPPANAKLQKGWDVDWSRPDDSALLLGVWKYGYGSWEAIKMDPTLGLADKIFIKDK 811
            + SF     A +   +DVDW   +D+ LL G+++YG GSWE +K+DPTL L DKI + D
Sbjct: 1308 QWSFNIKTRAPV---FDVDWGIEEDTKLLCGIYQYGIGSWEQMKLDPTLKLTDKILLND- 1363

Query: 810  TKKPQGKNLQVRVDYLLKLM 751
            T+KPQ K LQ R +YLLK++
Sbjct: 1364 TRKPQAKQLQTRAEYLLKII 1383


>gi|7511822|pir||T13944 chromodomain-helicase-DNA-binding protein -
            fruit fly  (Drosophila melanogaster)
 gi|1448983|gb|AAC37264.1| chromodomain-helicase-DNA-binding protein
          Length = 1883

 Score =  970 bits (2508), Expect = 0.0
 Identities = 540/1100 (49%), Positives = 701/1100 (63%), Gaps = 61/1100 (5%)
 Frame = -1

Query: 3867 EWDEEPAVPAEGPAI---LTETVERVIKWRHGVPGATGSATTCYNIADKG-DPN-----D 3715
            E+DE  A      A      ET+ER++  R G  G TG+ TT Y I + G DP+
Sbjct: 298  EYDESQAATTAATAEEEEKCETIERILAQRAGKRGCTGNQTTIYAIEENGFDPHAGFDEK 357

Query: 3714 QIPGDKTEQQFFVKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSAD 3535
            Q P  +TE QF +KW GWS++HNTWESE +L  M AKG+KK+ N++KK+KE   W+R A
Sbjct: 358  QTPDAETEAQFLIKWKGWSYIHNTWESEATLRDMKAKGMKKLDNFIKKEKEQAYWRRYAG 417

Query: 3534 KEYIEFFECEQQMAEELCEEYKKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTW 3355
             E I++FEC+ ++  EL + Y  V+R++A  +  D   DG+   EYL KW  LPY++ TW
Sbjct: 418  PEDIDYFECQLELQHELLKSYNNVDRIIAKGSKPD---DGT--EEYLCKWQSLPYAESTW 472

Query: 3354 EDEKMVAPEQIKA---YYHRIENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKL 3184
            ED  +V  +  +    +  R  +  +P+++  V++ RPKF + ++ P+FL     S   L
Sbjct: 473  EDAALVLRKWQRCAEQFNDRESSKCTPSRHCRVIKYRPKFSRIKNQPEFLS----SGLTL 528

Query: 3183 RDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLST 3004
            RDYQ++GLNW++++WCK NS ILADEMGLGKTIQ+I  L SLF  + L GP+L VVPLST
Sbjct: 529  RDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLYGPFLCVVPLST 588

Query: 3003 MAAWQKEFAQWAPEMNLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKA 2824
            M AWQ+EF  WAP+MN+V Y+GD+ SR++I+QYEW    +K++K N ILTTYEI+LKDK
Sbjct: 589  MTAWQREFDLWAPDMNVVTYLGDIKSRELIQQYEWQFESSKRLKFNCILTTYEIVLKDKQ 648

Query: 2823 FLSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIM 2644
            FL ++ WAALLVDEAHRLKND+SLLYKSL +F  NH+LLITGTPLQNSLKELWALLHFIM
Sbjct: 649  FLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLHFIM 708

Query: 2643 PEKFDCWEEFETAHNESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAH 2464
            P+KFD WE FE  H  +  KG + LH++LEP++LRRVKKDVEKSLP K EQILRV+MT+
Sbjct: 709  PDKFDTWENFEVQHGNAEDKGHTRLHQQLEPYILRRVKKDVEKSLPAKVEQILRVEMTSL 768

Query: 2463 QKQFYKWILTKNYRELSKGVKGSINGFVNLVMELKKCCNHASLTR--QYDHIYDDAQGXX 2290
            QKQ+YKWILTKN+  L KG +GS + F+N+V+ELKKCCNHA+L R  +++ +
Sbjct: 769  QKQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDEAL 828

Query: 2289 XXXXXXXXXXXXXXXXXXXXXXXGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRA 2110
                                   GHRVLIFSQMV MLD+L +YLQ R FP QRLDGS++
Sbjct: 829  QTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKG 888

Query: 2109 DLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHR 1930
            ++R+QALDH+NA GS DF FLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQA +RAHR
Sbjct: 889  EMRRQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHR 948

Query: 1929 IGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTVLSK--NATASGSV 1756
            IGQ   VNIYRLVT  SVEE+IVERAK+K+VLDHLVIQRMDTTG+TVL K  N  +S S
Sbjct: 949  IGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSGNGHSSNSN 1008

Query: 1755 PFDKQELSAILKFGAVXXXXXXXXXXXXXEVDIDRILMGAETREAEEEVMKENELLSSFK 1576
            PF+K +LSAILKFGA                DID IL  AETR  + E M  ++LLS+FK
Sbjct: 1009 PFNKDDLSAILKFGAEELFKDEQEHDDDLVCDIDEILRRAETRNEDPE-MPADDLLSAFK 1067

Query: 1575 YANFAIDEE--------KDIAAATDE-----WAAIIPEEDRNRILEEERMKELAEMNLAP 1435
             A+ A  EE        +D  AA +E     W  IIPE  R  I ++ER KE+ ++ L P
Sbjct: 1068 VASIAAFEEEPSDSVSKQDQNAAGEEDDSKDWDDIIPEGFRKAIDDQERAKEMEDLYLPP 1127

Query: 1434 RQR------------------KQPIPQ-------VVXXXXXXXXXXXXXXXXXXXXKAVG 1330
            R++                  KQ            +                    + +
Sbjct: 1128 RRKTAANQNEGKRGAGKGGKGKQQADDSGGDSDYELGSDGSGDDGRPRKRGRPTMKEKIT 1187

Query: 1329 NFTIPEIKRFIKSFRKFSMPLNRLEEIAQDAELEEHSTDEMKKLVESLSEACKKAADEFD 1150
             FT  E++RFI+S++KF  PL+R+E IA DAEL+E    E+K+L E L + C +   E
Sbjct: 1188 GFTDAELRRFIRSYKKFPAPLHRMEAIACDAELQEKPLAELKRLGEMLHDRCVQFLHEHK 1247

Query: 1149 SNEK----NGDAGAAESEKKDIERKFKFHTCDVNLKQIERSHAELKPLHEILKS---EET 991
              E       +   A+  +       K      N K++     EL+PL+EI+ S   E
Sbjct: 1248 EEESKTAATDETPGAKQRRARATFSVKLGGVSFNAKKLLACEQELQPLNEIMPSMPEERQ 1307

Query: 990  KTSFKPPANAKLQKGWDVDWSRPDDSALLLGVWKYGYGSWEAIKMDPTLGLADKIFIKDK 811
            + SF     A +   +DVDW   +D+ LL G+++YG GSWE +K+DPTL L DKI + D
Sbjct: 1308 QWSFNIKTRAPV---FDVDWGIEEDTKLLCGIYQYGIGSWEQMKLDPTLKLTDKILLND- 1363

Query: 810  TKKPQGKNLQVRVDYLLKLM 751
            T+KPQ K LQ R +YLLK++
Sbjct: 1364 TRKPQAKQLQTRAEYLLKII 1383


>gi|40215423|gb|AAR82736.1| SD21488p [Drosophila melanogaster]
          Length = 1645

 Score =  968 bits (2502), Expect = 0.0
 Identities = 539/1100 (49%), Positives = 700/1100 (63%), Gaps = 61/1100 (5%)
 Frame = -1

Query: 3867 EWDEEPAVPAEGPAI---LTETVERVIKWRHGVPGATGSATTCYNIADKG-DPN-----D 3715
            E+DE  A      A      ET+ER++  R G  G TG+ TT Y I + G DP+
Sbjct: 298  EYDESQAATTAATAEEEEKCETIERILAQRAGKRGCTGNQTTIYAIEENGFDPHAGFDEK 357

Query: 3714 QIPGDKTEQQFFVKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSAD 3535
            Q    +TE QF +KW GWS++HNTWESE +L  M AKG+KK+ N++KK+KE   W+R A
Sbjct: 358  QTSDAETEAQFLIKWKGWSYIHNTWESEATLRDMKAKGMKKLDNFIKKEKEQAYWRRYAG 417

Query: 3534 KEYIEFFECEQQMAEELCEEYKKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTW 3355
             E I++FEC+ ++  EL + Y  V+R++A  +  D   DG+   EYL KW  LPY++ TW
Sbjct: 418  PEDIDYFECQLELQHELLKSYNNVDRIIAKGSKPD---DGT--EEYLCKWQSLPYAESTW 472

Query: 3354 EDEKMVAPEQIKA---YYHRIENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKL 3184
            ED  +V  +  +    +  R  +  +P+++  V++ RPKF + ++ P+FL     S   L
Sbjct: 473  EDAALVLRKWQRCAEQFNDRESSKCTPSRHCRVIKYRPKFSRIKNQPEFLS----SGLTL 528

Query: 3183 RDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLST 3004
            RDYQ++GLNW++++WCK NS ILADEMGLGKTIQ+I  L SLF  + L GP+L VVPLST
Sbjct: 529  RDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLYGPFLCVVPLST 588

Query: 3003 MAAWQKEFAQWAPEMNLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKA 2824
            M AWQ+EF  WAP+MN+V Y+GD+ SR++I+QYEW    +K++K N ILTTYEI+LKDK
Sbjct: 589  MTAWQREFDLWAPDMNVVTYLGDIKSRELIQQYEWQFESSKRLKFNCILTTYEIVLKDKQ 648

Query: 2823 FLSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIM 2644
            FL ++ WAALLVDEAHRLKND+SLLYKSL +F  NH+LLITGTPLQNSLKELWALLHFIM
Sbjct: 649  FLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLHFIM 708

Query: 2643 PEKFDCWEEFETAHNESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAH 2464
            P+KFD WE FE  H  +  KG + LH++LEP++LRRVKKDVEKSLP K EQILRV+MT+
Sbjct: 709  PDKFDTWENFEVQHGNAEDKGYTRLHQQLEPYILRRVKKDVEKSLPAKVEQILRVEMTSL 768

Query: 2463 QKQFYKWILTKNYRELSKGVKGSINGFVNLVMELKKCCNHASLTR--QYDHIYDDAQGXX 2290
            QKQ+YKWILTKN+  L KG +GS + F+N+V+ELKKCCNHA+L R  +++ +
Sbjct: 769  QKQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDEAL 828

Query: 2289 XXXXXXXXXXXXXXXXXXXXXXXGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRA 2110
                                   GHRVLIFSQMV MLD+L +YLQ R FP QRLDGS++
Sbjct: 829  QTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKG 888

Query: 2109 DLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHR 1930
            ++R+QALDH+NA GS DF FLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQA +RAHR
Sbjct: 889  EMRRQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHR 948

Query: 1929 IGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTVLSK--NATASGSV 1756
            IGQ   VNIYRLVT  SVEE+IVERAK+K+VLDHLVIQRMDTTG+TVL K  N  +S S
Sbjct: 949  IGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSGNGHSSNSN 1008

Query: 1755 PFDKQELSAILKFGAVXXXXXXXXXXXXXEVDIDRILMGAETREAEEEVMKENELLSSFK 1576
            PF+K +LSAILKFGA                DID IL  AETR  + E M  ++LLS+FK
Sbjct: 1009 PFNKDDLSAILKFGAEELFKDEQEHDDDLVCDIDEILRRAETRNEDPE-MPADDLLSAFK 1067

Query: 1575 YANFAIDEE--------KDIAAATDE-----WAAIIPEEDRNRILEEERMKELAEMNLAP 1435
             A+ A  EE        +D  AA +E     W  IIPE  R  I ++ER KE+ ++ L P
Sbjct: 1068 VASIAAFEEEPSDSVSKQDQNAAGEEDDSKDWDDIIPEGFRKAIDDQERAKEMEDLYLPP 1127

Query: 1434 RQR------------------KQPIPQ-------VVXXXXXXXXXXXXXXXXXXXXKAVG 1330
            R++                  KQ            +                    + +
Sbjct: 1128 RRKTAANQNEGKRGAGKGGKGKQQADDSGGDSDYELGSDGSGDDGRPRKRGRPTMKEKIT 1187

Query: 1329 NFTIPEIKRFIKSFRKFSMPLNRLEEIAQDAELEEHSTDEMKKLVESLSEACKKAADEFD 1150
             FT  E++RFI+S++KF  PL+R+E IA DAEL+E    E+K+L E L + C +   E
Sbjct: 1188 GFTDAELRRFIRSYKKFPAPLHRMEAIACDAELQEKPLAELKRLGEMLHDRCVQFLHEHK 1247

Query: 1149 SNEK----NGDAGAAESEKKDIERKFKFHTCDVNLKQIERSHAELKPLHEILKS---EET 991
              E       +   A+  +       K      N K++     EL+PL+EI+ S   E
Sbjct: 1248 EEESKTAATDETPGAKQRRARATFSVKLGGVSFNAKKLLACEQELQPLNEIMPSMPEERQ 1307

Query: 990  KTSFKPPANAKLQKGWDVDWSRPDDSALLLGVWKYGYGSWEAIKMDPTLGLADKIFIKDK 811
            + SF     A +   +DVDW   +D+ LL G+++YG GSWE +K+DPTL L DKI + D
Sbjct: 1308 QWSFNIKTRAPV---FDVDWGIEEDTKLLCGIYQYGIGSWEQMKLDPTLKLTDKILLND- 1363

Query: 810  TKKPQGKNLQVRVDYLLKLM 751
            T+KPQ K LQ R +YLLK++
Sbjct: 1364 TRKPQAKQLQTRAEYLLKII 1383


>gi|47206405|emb|CAG01534.1| unnamed protein product [Tetraodon
            nigroviridis]
          Length = 1491

 Score =  957 bits (2475), Expect = 0.0
 Identities = 519/1056 (49%), Positives = 679/1056 (64%), Gaps = 59/1056 (5%)
 Frame = -1

Query: 3819 TETVERVIKWRHGVPGATGSATTCYNIADKGDPNDQIP--GDKTEQQFFVKWTGWSHLHN 3646
            +ET+ERV++ R G  GATG++TT Y + + GDPN+      D+ E Q+ +KW  WS++HN
Sbjct: 257  SETIERVMETRTGKKGATGASTTVYAVEENGDPNEGFDPVSDEGETQYLIKWKDWSYIHN 316

Query: 3645 TWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSADKEYIEFFECEQQMAEELCEEYKK 3466
            TWES  SL     KGLKK+ NY KK +E+  W R A  E +EF  C+Q++  EL ++++
Sbjct: 317  TWESLASLVQQKVKGLKKLDNYKKKHEELSSWLRKASPEDVEFHNCQQELTAELSKQFQV 376

Query: 3465 VERVVAHQTSRDRAAD----------GSMATEYLIKWSGLPYSDCTWEDEKMVAPEQ--- 3325
            VERV+A +T +   +            S   EYL KW GLPYS+C+WED+ +V  +
Sbjct: 377  VERVIATRTGKASGSSDFPSHSHKNTSSNEPEYLCKWMGLPYSECSWEDDSLVKKKFQRC 436

Query: 3324 IKAYYHRIENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLNWMVY 3145
            I  + +R  +   P+K+  VL++RP+F   +  P F+   G+   +LRDYQL+GLNW+ +
Sbjct: 437  IDGFMNRNSSKTVPSKDCKVLKQRPRFVALKKQPPFI---GDDNLQLRDYQLDGLNWLAH 493

Query: 3144 AWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQWAP 2965
            +WC+ NS ILADEMGLGKTIQ+IS L+ LFH++ L GP+L+VVPLST+ +WQ+EF  WAP
Sbjct: 494  SWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLLVVPLSTLTSWQREFETWAP 553

Query: 2964 EMNLVVYMGDVVSRDM---------------------------IRQYEWFVGGTKKMKIN 2866
            +MN+VVY+GDV+SR                             IR YEW    TK+++ N
Sbjct: 554  DMNVVVYLGDVMSRKTVGRRSKVTPRVLFFRVVTFMLFPPPVKIRDYEWVNHQTKRIRFN 613

Query: 2865 AILTTYEILLKDKAFLSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQ 2686
            A+LTTYEILLKDK  L +I+WA L VDEAHRLKND+SLLYK+L +FR NH+LLITGTPLQ
Sbjct: 614  ALLTTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLMEFRSNHRLLITGTPLQ 673

Query: 2685 NSLKELWALLHFIMPEKFDCWEEFETAHNESNHKGISALHKKLEPFLLRRVKKDVEKSLP 2506
            NSLKELW+LLHF+MP+KFD WE+FE  H +    G  +LHK LEPFLLRRVKKDVEKSLP
Sbjct: 674  NSLKELWSLLHFLMPDKFDSWEDFEDDHGKGRDNGYQSLHKVLEPFLLRRVKKDVEKSLP 733

Query: 2505 PKTEQILRVDMTAHQKQFYK--------WILTKNYRELSKGVKGSINGFVNLVMELKKCC 2350
             K EQILRVDM+A QKQFYK        WILT+NY+ L+KG +GS +GF+N+VMELKKCC
Sbjct: 734  AKVEQILRVDMSAQQKQFYKSVCLPSCRWILTRNYKALAKGTRGSSSGFLNIVMELKKCC 793

Query: 2349 NHASLTRQ-YDHIYDDAQGXXXXXXXXXXXXXXXXXXXXXXXXXGHRVLIFSQMVMMLDI 2173
            NH+ L +Q  D   +  +                          G+RVLIFSQMV MLDI
Sbjct: 794  NHSFLIKQPEDGETETYEEQLQAVVRGSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDI 853

Query: 2172 LQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTV 1993
            L EYL  +R+P QRLDGS++ ++RKQALDH+NA GS DF FLLSTRAGGLGINLA+ADTV
Sbjct: 854  LAEYLTRKRYPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTV 913

Query: 1992 IIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQR 1813
            +IFDSDWNPQNDLQA +RAHRIGQ K VNIYRLVTKG+VEE+I+ERAK+K+VLDHLVIQR
Sbjct: 914  VIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQR 973

Query: 1812 MDTTGKTVLSKNATASGSVPFDKQELSAILKFGAVXXXXXXXXXXXX-XEVDIDRILMGA 1636
            MDTTG+TVL  ++  + S PF+K+EL+AILKFGA               E+DID IL  A
Sbjct: 974  MDTTGRTVLDSSSRNTNSNPFNKEELTAILKFGAEELFKEAEGEESEPLEMDIDEILRLA 1033

Query: 1635 ETREAEEEVMKENELLSSFKYANFAIDEEKDIAA---ATDEWAAIIPEEDRNRILEEERM 1465
            ETRE+++     +ELLS FK ANF+  EE        +  EW  IIPE+ R +I EEE+
Sbjct: 1034 ETRESDQGSSATDELLSQFKVANFSTMEESTPELEEKSAREWDDIIPEDQRRKIEEEEKQ 1093

Query: 1464 KELA---EMNLAPRQRKQPIPQVVXXXXXXXXXXXXXXXXXXXXKAVGNFTIPEIKRFIK 1294
            +E+A   + + + ++ +    +                        V  FT  EI+RFIK
Sbjct: 1094 REMANDSDSDASKQKHRTSGSESETDDSDDDKKPKKRGRPRARKNNVEGFTDAEIRRFIK 1153

Query: 1293 SFRKFSMPLNRLEEIAQDAELEEHSTDEMKKLVESLSEACKKAADEFDSNEKNGDAGAAE 1114
            +++KF  PL RLE IA+DAEL + S  ++K+L E +  +C  A  E +   K      A+
Sbjct: 1154 AYKKFGAPLERLEAIARDAELVDKSIADLKRLGELIHSSCVTAVQEHEEELKEKPV-EAK 1212

Query: 1113 SEKKDIERKFKFHTCDVNLKQIERSHAELKPLHEILKSEET-KTSFKPPANAKLQKGWDV 937
               K      K     VN K I +   E +PLH+ + S    +  FK     K+   +DV
Sbjct: 1213 GPGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKAVPSNAAERNKFKLTCRVKIAH-FDV 1271

Query: 936  DWSRPDDSALLLGVWKYGYGSWEAIKMDPTLGLADK 829
            DW   DD  LLLGV+++G+G+W+ IK DP L LADK
Sbjct: 1272 DWDLQDDVHLLLGVYEHGFGNWDLIKTDPDLKLADK 1307


>gi|5917755|gb|AAD56023.1| chromodomain helicase DNA binding protein 1
            [Gallus gallus]
          Length = 981

 Score =  952 bits (2460), Expect = 0.0
 Identities = 504/993 (50%), Positives = 656/993 (65%), Gaps = 31/993 (3%)
 Frame = -1

Query: 3687 QFFVKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSADKEYIEFFEC 3508
            Q+ +KW GWSH+HNTWESE +L   N KG+KK+ NY KK +E + W ++A  E +E++ C
Sbjct: 2    QYLIKWKGWSHIHNTWESEETLKQQNVKGMKKLDNYKKKCQETKRWLKNASPEDVEYYNC 61

Query: 3507 EQQMAEELCEEYKKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWEDEKMVAPE 3328
            +Q+  ++L ++Y+ VER++AH   +  A       +Y  KW GLPYS+C+WED  ++A +
Sbjct: 62   QQEFTDDLHKQYQVVERIIAHSNQKSAAG----YPDYYCKWQGLPYSECSWEDGALIAKK 117

Query: 3327 Q---IKAYYHRIENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLN 3157
                I  Y+ R ++  +P K+  +L++RP+F   +  P ++   G    +LRDYQL GLN
Sbjct: 118  FQACIDEYFSRNQSKTTPFKDCKILKQRPRFVALKKQPSYI--GGRDCLELRDYQLNGLN 175

Query: 3156 WMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFA 2977
            W+ ++WCKGNS ILADEMGLGKTIQ+IS L  LFH ++L GP+L+VVPLST+ +WQ+E
Sbjct: 176  WLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHELYGPFLLVVPLSTLTSWQREIQ 235

Query: 2976 QWAPEMNLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLSSIDWAA 2797
             WAP+MN VVY+GD+ SR+MIR +EW    TK++K N +LTTYEILLKDK+FL  ++
Sbjct: 236  TWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLGGLNRVF 295

Query: 2796 LLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKFDCWEE 2617
            + +DEAHRLKND+SLLYK+L  F+ NH+LLITGTPLQNSLKELW+LLHFIMPEKF  WE+
Sbjct: 296  IGIDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWED 355

Query: 2616 FETAHNESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQFYKWIL 2437
            FE  H +    G ++LHK+LEPFLLRRVKKDVEKS P K EQILR++M+A QKQ+YKWIL
Sbjct: 356  FEEEHGKGREFGYASLHKELEPFLLRRVKKDVEKSSPAKVEQILRMEMSALQKQYYKWIL 415

Query: 2436 TKNYRELSKGVKGSINGFVNLVMELKKCCNHASLTR-QYDHIYDDAQGXXXXXXXXXXXX 2260
            T+NY+ LSKG KGS +GF+N++MELKKCCNH  L +   D+ + + Q
Sbjct: 416  TRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSGKL 475

Query: 2259 XXXXXXXXXXXXXGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHY 2080
                         G+RVLIFSQMV MLDIL EYL+ R+FP QRLDGS++ +LRKQALDH+
Sbjct: 476  ILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHF 535

Query: 2079 NAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIY 1900
            NA GS DF FLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA +RAHRIG  K VNIY
Sbjct: 536  NAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGPKKQVNIY 595

Query: 1899 RLVTKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTVLSKNATASGSVPFDKQELSAILK 1720
            RLVTKGSVEE+I+ERAK+K+VLDHLVIQRMDTTGKTVL   +T S S PF+K+ELSAILK
Sbjct: 596  RLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILK 655

Query: 1719 FGAVXXXXX-XXXXXXXXEVDIDRILMGAETREAEEEVMK-ENELLSSFKYANFAIDEEK 1546
            FGA               E+DID IL  AETRE E  ++   +ELLS FK ANF+  +E
Sbjct: 656  FGAEELFKEPEGEEEEPQEMDIDEILKRAETRENESGLLTVGDELLSQFKVANFSNMDED 715

Query: 1545 DIAAATDE----WAAIIPEEDRNRILEEERMKELAEMNLAPRQRKQPIPQVVXXXXXXXX 1378
            DI    ++    W  IIPE    RI EEER KEL E+ + PR R     + +
Sbjct: 716  DIELEPEQNLRNWEEIIPEVQWRRIEEEERQKELEEIYMLPRMRN--CAKQISFNGNEGR 773

Query: 1377 XXXXXXXXXXXXKAVG--------------------NFTIPEIKRFIKSFRKFSMPLNRL 1258
                         ++                      F+  EI+RFIKS++KF  PL RL
Sbjct: 774  CSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERL 833

Query: 1257 EEIAQDAELEEHSTDEMKKLVESLSEACKKAADEFDSNEKNGDAGAAESEKKDIERKFKF 1078
            + IA+DAEL + S  ++++L E +   C KA ++ D  +  G  G    + K     F+
Sbjct: 834  DAIARDAELVDKSETDLRRLGELVHNGCIKALNDNDFGQ--GRTGGRFGKVKG--PTFRI 889

Query: 1077 HTCDVNLKQIERSHAELKPLHEILKSE-ETKTSFKPPANAKLQKGWDVDWSRPDDSALLL 901
                VN K +     EL PLH+ + S+ E +  +  P + K    +D+DW + DDS LL+
Sbjct: 890  AGVQVNAKLVISHEEELAPLHKSIPSDPEERKRYVIPYHTKAAH-FDIDWGKEDDSNLLI 948

Query: 900  GVWKYGYGSWEAIKMDPTLGLADKIFIKDKTKK 802
            G+++YGYGSWE IKMDP L L  KI   D  KK
Sbjct: 949  GIYEYGYGSWEMIKMDPDLSLTQKILPDDPDKK 981


>gi|26340418|dbj|BAC33872.1| unnamed protein product [Mus musculus]
          Length = 1081

 Score =  890 bits (2300), Expect = 0.0
 Identities = 456/812 (56%), Positives = 578/812 (71%), Gaps = 15/812 (1%)
 Frame = -1

Query: 3816 ETVERVIKWRHGVPGATGSATTCYNIADKGDPN-----DQIPGDKTEQQFFVKWTGWSHL 3652
            ET+ERV+  R G  GATG+ TT Y +   GDPN     ++ PGD    Q+ +KW GWSH+
Sbjct: 270  ETIERVMDCRVGRKGATGATTTIYAVEADGDPNAGFERNKEPGDI---QYLIKWKGWSHI 326

Query: 3651 HNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSADKEYIEFFECEQQMAEELCEEY 3472
            HNTWE+E +L   N +G+KK+ NY KK +E + W ++A  E +E++ C+Q++ ++L ++Y
Sbjct: 327  HNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQY 386

Query: 3471 KKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWEDEKMVAPEQ---IKAYYHRI 3301
            + VER++AH   +  A       +Y  KW GLPYS+C+WED  +++ +    I  Y+ R
Sbjct: 387  QIVERIIAHSNQKSAAG----LPDYYCKWQGLPYSECSWEDGALISKKFQTCIDEYFSRN 442

Query: 3300 ENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLNWMVYAWCKGNSS 3121
            ++  +P K+  VL++RP+F   +  P ++   G    +LRDYQL GLNW+ ++WCKGNS
Sbjct: 443  QSKTTPFKDCKVLKQRPRFVALKKQPSYI--GGHEGLELRDYQLNGLNWLAHSWCKGNSC 500

Query: 3120 ILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQWAPEMNLVVYM 2941
            ILADEMGLGKTIQ+IS L  LFH + L GP+L+VVPLST+ +WQ+E   WA +MN VVY+
Sbjct: 501  ILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYL 560

Query: 2940 GDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLSSIDWAALLVDEAHRLKND 2761
            GD+ SR+MIR +EW    TK++K N +LTTYEILLKDKAFL  ++WA + VDEAHRLKND
Sbjct: 561  GDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKND 620

Query: 2760 ESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKFDCWEEFETAHNESNHKG 2581
            +SLLYK+L  F+ NH+LLITGTPLQNSLKELW+LLHFIMPEKF  WE+FE  H +    G
Sbjct: 621  DSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYG 680

Query: 2580 ISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQFYKWILTKNYRELSKGVK 2401
             ++LHK+LEPFLLRRVKKDVEKSLP K EQILR++M+A QKQ+YKWILT+NY+ LSKG K
Sbjct: 681  YASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSK 740

Query: 2400 GSINGFVNLVMELKKCCNHASLTRQYD-HIYDDAQGXXXXXXXXXXXXXXXXXXXXXXXX 2224
            GS +GF+N++MELKKCCNH  L +  D + + + Q
Sbjct: 741  GSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRE 800

Query: 2223 XGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLL 2044
             G+RVLIFSQMV MLDIL EYL+ R+FP QRLDGS++ +LRKQALDH+NA GS DF FLL
Sbjct: 801  RGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLL 860

Query: 2043 STRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEI 1864
            STRAGGLGINLA+ADTV+IFDSDWNPQNDLQA +RAHRIGQ K VNIYRLVTKGSVEE+I
Sbjct: 861  STRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDI 920

Query: 1863 VERAKRKLVLDHLVIQRMDTTGKTVLSKNATASGSVPFDKQELSAILKFGAVXXXXX-XX 1687
            +ERAK+K+VLDHLVIQRMDTTGKTVL   +  S S PF+K+ELSAILKFGA
Sbjct: 921  LERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELSAILKFGAEELFKEPEG 980

Query: 1686 XXXXXXEVDIDRILMGAETREAEEEVMK-ENELLSSFKYANFAIDEEKDIAAATD----E 1522
                  E+DID IL  AET E E   +   +ELLS FK ANF+  +E DI    +
Sbjct: 981  EEQEPQEMDIDEILKRAETHENEPGPLSVGDELLSQFKVANFSNMDEDDIELEPERNSKN 1040

Query: 1521 WAAIIPEEDRNRILEEERMKELAEMNLAPRQR 1426
            W  IIPEE R R+ EEER KEL E+ + PR R
Sbjct: 1041 WEEIIPEEQRRRLEEEERQKELEEIYMLPRMR 1072


>gi|5917754|gb|AAD56022.1| chromodomain helicase DNA binding protein 1
            [Aegolius funereus]
          Length = 918

 Score =  887 bits (2291), Expect = 0.0
 Identities = 479/931 (51%), Positives = 614/931 (65%), Gaps = 31/931 (3%)
 Frame = -1

Query: 3501 QMAEELCEEYKKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWEDEKMVAPEQ- 3325
            ++ ++L ++Y+ VER++AH   +  A       +Y  KW GLPYS+C+WED  ++A +
Sbjct: 1    ELTDDLHKQYQIVERIIAHSNQKSAAG----YPDYYCKWQGLPYSECSWEDGALIAKKFQ 56

Query: 3324 --IKAYYHRIENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLNWM 3151
              I  Y+ R ++  +P K+  VL++RP+F   +  P ++   G    +LRDYQL GLNW+
Sbjct: 57   TCIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYI--GGHEGLELRDYQLNGLNWL 114

Query: 3150 VYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQW 2971
             ++WCKGNS ILADEMGLGKTIQ+IS L  LFH + L GP+L+VVPLST+ +WQ+E   W
Sbjct: 115  AHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTW 174

Query: 2970 APEMNLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLSSIDWAALL 2791
            AP+MN VVY+GD+ SR+MIR +EW    TK++K N +LTTYEILLKDK+FL  ++WA +
Sbjct: 175  APQMNAVVYLGDITSRNMIRTHEWMHLQTKRLKFNILLTTYEILLKDKSFLGGLNWAFIG 234

Query: 2790 VDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKFDCWEEFE 2611
            VDEAHRLKND+SLLYK+L  F+ NH+LLITGTPLQNSLKELW+LLHFIMPEKF  WE+FE
Sbjct: 235  VDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFE 294

Query: 2610 TAHNESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQFYKWILTK 2431
              H +    G ++LHK+LEPFLLRRVKKDVEKSLP K EQILR++M+A QKQ+YKWILT+
Sbjct: 295  EEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTR 354

Query: 2430 NYRELSKGVKGSINGFVNLVMELKKCCNHASLTRQYD-HIYDDAQGXXXXXXXXXXXXXX 2254
            NY+ LSKG KGS +GF+N++MELKKCCNH  L +  D + + + Q
Sbjct: 355  NYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDGNEFYNKQEALQHLIRSSGKLIL 414

Query: 2253 XXXXXXXXXXXGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNA 2074
                       G+RVLIFSQMV MLDIL EYL+ R+FP QRLDGS++ +LRKQALDH+NA
Sbjct: 415  LDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNA 474

Query: 2073 PGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRL 1894
             GS DF FLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA +RAHRIGQ K VNIYRL
Sbjct: 475  EGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRL 534

Query: 1893 VTKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTVLSKNATASGSVPFDKQELSAILKFG 1714
            VTKGSVEE+I+ERAK+K+VLDHLVIQRMDTTGKTVL   +T S S PF+K+ELSAILKFG
Sbjct: 535  VTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILKFG 594

Query: 1713 AVXXXXX-XXXXXXXXEVDIDRILMGAETREAEE-EVMKENELLSSFKYANFAIDEEKDI 1540
            A               E+DID IL  AETRE E   +   +ELLS FK ANF+  +E DI
Sbjct: 595  AEELFKEPEGEEQEPQEMDIDEILKRAETRENEPGPLTVGDELLSQFKVANFSNMDEDDI 654

Query: 1539 AAATD----EWAAIIPEEDRNRILEEERMKELAEMNLAPRQRKQPIPQVVXXXXXXXXXX 1372
                +     W  IIPE  R RI EEER KEL E+ + PR R     + +
Sbjct: 655  ELEPERNSRNWEEIIPEVQRRRIEEEERQKELEEIYMLPRMRN--CAKQISFNGSEGRRS 712

Query: 1371 XXXXXXXXXXKAVG--------------------NFTIPEIKRFIKSFRKFSMPLNRLEE 1252
                       ++                      F+  EI+RFIKS++KF  PL RL+
Sbjct: 713  RSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDA 772

Query: 1251 IAQDAELEEHSTDEMKKLVESLSEACKKAADEFDSNEKNGDAGAAESEKKDIERKFKFHT 1072
            +A+DAEL + S  ++++L E +   C KA  +  S ++   AG    + K     F+
Sbjct: 773  VARDAELVDKSETDLRRLGELVHNGCIKALKDSSSGQER--AGGRLGKVKG--PTFRISG 828

Query: 1071 CDVNLKQIERSHAELKPLHEILKSE-ETKTSFKPPANAKLQKGWDVDWSRPDDSALLLGV 895
              VN K +     EL PLH+ + S+ E +  +  P + K    +D+DW + DDS LL+G+
Sbjct: 829  VQVNAKLVISHEEELAPLHKSIPSDPEERKRYVIPCHTKAAH-FDIDWGKEDDSNLLIGI 887

Query: 894  WKYGYGSWEAIKMDPTLGLADKIFIKDKTKK 802
            ++YGYGSWE IKMDP L L  KI   D  KK
Sbjct: 888  YEYGYGSWEMIKMDPDLSLTQKILPDDPDKK 918


>gi|5917753|gb|AAD56021.1| chromodomain helicase DNA binding protein 1
            [Aegolius funereus]
          Length = 918

 Score =  884 bits (2283), Expect = 0.0
 Identities = 475/933 (50%), Positives = 612/933 (64%), Gaps = 33/933 (3%)
 Frame = -1

Query: 3501 QMAEELCEEYKKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWEDEKMVAPEQ- 3325
            ++ ++L ++Y+ VER++AH   +  A       +Y  KW GLPYS+C+WED  ++A +
Sbjct: 1    ELTDDLLKQYQIVERIIAHSNQKSAAG----YPDYYCKWQGLPYSECSWEDGALIAKKFQ 56

Query: 3324 --IKAYYHRIENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLNWM 3151
              I  Y+ R ++  +P K+  +L++RP+F   +  P ++   G  + +LRDYQL GLNW+
Sbjct: 57   ACIDEYFSRNQSKTTPFKDCKILKQRPRFVALKKQPSYI--GGHESLELRDYQLNGLNWL 114

Query: 3150 VYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQW 2971
             ++WCKGNS ILADEMGLGKTIQ+IS L  LFH + L GP+L+VVPLST+ +WQ+E   W
Sbjct: 115  AHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTW 174

Query: 2970 APEMNLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLSSIDWAALL 2791
            AP+MN VVY+GD++SR+MIR +EW    TK++K N +LTTYEILLKDK+FL  ++W  +
Sbjct: 175  APQMNSVVYLGDIISRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLGGLNWVFIG 234

Query: 2790 VDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKFDCWEEFE 2611
            VDEAHRLKND+SLLYK+L  F+ NH+LLITGTPLQNSLKELW+LLHFIMPEKF  WE+FE
Sbjct: 235  VDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFE 294

Query: 2610 TAHNESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQFYKWILTK 2431
              H +    G ++LHK+LEPFLLRRVKKDVEKSLP K EQILR++M+A QKQ+YKWILT+
Sbjct: 295  EEHGKGREFGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTR 354

Query: 2430 NYRELSKGVKGSINGFVNLVMELKKCCNHASLTR-QYDHIYDDAQGXXXXXXXXXXXXXX 2254
            NY+ LSKG KGS +GF+N++MELKKCCNH  L +   D+ + + Q
Sbjct: 355  NYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSGKLIL 414

Query: 2253 XXXXXXXXXXXGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNA 2074
                       G+RVLIFSQMV MLDIL EYL+ R+FP +RLDGS++ +LRKQALDH+NA
Sbjct: 415  LDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFRRLDGSIKGELRKQALDHFNA 474

Query: 2073 PGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRL 1894
             GS DF FLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA +RAHRIGQ K VNIYRL
Sbjct: 475  EGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRL 534

Query: 1893 VTKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTVLSKNATASGSVPFDKQELSAILKFG 1714
            VTKGSVEE+I+ERAK+K+VLDHLVIQRMDTTGKTVL   +T S S PF+K+ELSAILKFG
Sbjct: 535  VTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILKFG 594

Query: 1713 AVXXXXX-XXXXXXXXEVDIDRILMGAETREAEE-EVMKENELLSSFKYANFAIDEEKDI 1540
            A               E+DID IL  AETRE E   +   +ELLS  K ANF+  +E DI
Sbjct: 595  AEELFKEPEGEEEEPQEMDIDEILKRAETRENEPGPLTVGDELLSQIKVANFSNMDEDDI 654

Query: 1539 AAATDE----WAAIIPEEDRNRILEEERMKELAEMNLAPRQRKQPIPQVVXXXXXXXXXX 1372
                ++    W  IIPE  R RI EEER KEL E+ + PR R     + +
Sbjct: 655  ELEPEQNFKKWEEIIPEVQRRRIEEEERQKELEEIYMLPRMRN--CAKQISFNGSEGKRS 712

Query: 1371 XXXXXXXXXXKAVG--------------------NFTIPEIKRFIKSFRKFSMPLNRLEE 1252
                       ++                      F+  EI+RFIKS++KF  PL RL+
Sbjct: 713  RSRKYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDA 772

Query: 1251 IAQDAELEEHSTDEMKKLVESLSEACKKAA--DEFDSNEKNGDAGAAESEKKDIERKFKF 1078
            IA+DAEL + S  ++++L E +   C KA   + F      G  G  +         F+
Sbjct: 773  IARDAELVDKSETDLRRLGELVHNGCIKALKDNSFGQERAGGRLGKVKGP------TFRI 826

Query: 1077 HTCDVNLKQIERSHAELKPLHEILKSE-ETKTSFKPPANAKLQKGWDVDWSRPDDSALLL 901
                VN K +     EL PLH+ + S+ E +  +  P + K    +D+DW + DDS LL+
Sbjct: 827  SGVQVNAKLVISHEEELAPLHKSIPSDPEDRKRYVIPCHTKAAH-FDIDWGKEDDSNLLI 885

Query: 900  GVWKYGYGSWEAIKMDPTLGLADKIFIKDKTKK 802
            G+++YGYGSWE IKMDP L L  KI   D  KK
Sbjct: 886  GIYEYGYGSWEMIKMDPDLSLTQKILPDDPDKK 918


>gi|31211661|ref|XP_314800.1| ENSANGP00000011045 [Anopheles gambiae]
 gi|21298026|gb|EAA10171.1| ENSANGP00000011045 [Anopheles gambiae str.
            PEST]
          Length = 1912

 Score =  882 bits (2280), Expect = 0.0
 Identities = 468/864 (54%), Positives = 593/864 (68%), Gaps = 35/864 (4%)
 Frame = -1

Query: 3915 YAEKNSXXXXXXXDVLEWDEEPAVPAEGPAI---LTETVERVIKWRHGVPGATGSATTCY 3745
            Y E++        D+LE D+E    A   A      ET+ER+I  R G  GATG+ TT Y
Sbjct: 221  YKEESGDEPTDSDDLLEVDQEAEEAAAALAAEEEKAETIERIIGRRKGRRGATGAVTTVY 280

Query: 3744 NIADKGDPNDQIPG--------DKTEQQFFVKWTGWSHLHNTWESENSLALMNAKGLKKV 3589
             I + GDPN  + G        ++ E+QF +KWTGWS+LH TWESE +L     KG+KK+
Sbjct: 281  AIEENGDPN--VLGGEGVGREQEEEEEQFLIKWTGWSYLHCTWESEETLREQKVKGMKKL 338

Query: 3588 QNYVKKQKEVEMWKR-SADKEYIEFFECEQQMAEELCEEYKKVERVVAHQTSRDRAADGS 3412
            +NY+K+++++E W++  A  E I+++EC+Q++ ++L + Y  VER++A     ++A +G
Sbjct: 339  ENYIKREQQLEYWRKYQAGPEDIDYYECQQELQQDLLKSYYHVERIIAQA---NKAEEGD 395

Query: 3411 MATEYLIKWSGLPYSDCTWEDEKMVA---PEQIKAYYHRIENLKSPNKNSNVLRKRPKFE 3241
               EYL KW  LPYSD TWED  ++     ++I  ++ R E+ ++P+K+   +R RP F+
Sbjct: 396  SGLEYLCKWESLPYSDSTWEDAGLIRRKWQQKIVEFHEREESRRTPSKHCKAIRYRPNFK 455

Query: 3240 KFESMPDFLKTDGESTHKLRDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLAS 3061
              +  P++L    E   KLRDYQ++GLNW++  WCK NS ILADEMGLGKTIQ+I  L
Sbjct: 456  HLKQQPEYLGE--ERGLKLRDYQMDGLNWLILTWCKDNSVILADEMGLGKTIQTICFLYY 513

Query: 3060 LFHRYDLAGPYLVVVPLSTMAAWQKEFAQWAPEMNLVVYMGDVVSRDMIRQYEWFVGGTK 2881
            LF    L GP+L VVPLSTM AWQ+EF  WAPE+N+V Y+GDV SR++IRQYEW    TK
Sbjct: 514  LFKSQQLYGPFLCVVPLSTMPAWQREFGIWAPELNVVTYLGDVQSREIIRQYEWCYESTK 573

Query: 2880 KMKINAILTTYEILLKDKAFLSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLIT 2701
            K+K NAILTTYEILLKDK FL SI WA+LLVDEAHRLKND+SLLYK+L +F  NH+LLIT
Sbjct: 574  KLKFNAILTTYEILLKDKTFLGSIGWASLLVDEAHRLKNDDSLLYKALKEFDTNHRLLIT 633

Query: 2700 GTPLQNSLKELWALLHFIMPEKFDCWEEFETAH-NESNHKGISALHKKLEPFLLRRVKKD 2524
            GTPLQNSLKELWALLHFIMPE+F+ W++FE  + N +N K  + LHK+LEP++LRRVKKD
Sbjct: 634  GTPLQNSLKELWALLHFIMPERFESWDDFERNYGNTTNDKSYTKLHKELEPYILRRVKKD 693

Query: 2523 VEKSLPPKTEQILRVDMTAHQKQFYKWILTKNYRELSKGVKGSINGFVNLVMELKKCCNH 2344
            VEKSLP K EQILRV+MT+ Q+Q+YKWIL+KN+  L KG+KGS+  F+N+V+ELKKCCNH
Sbjct: 694  VEKSLPAKVEQILRVEMTSIQRQYYKWILSKNFDALRKGMKGSVGTFLNIVIELKKCCNH 753

Query: 2343 ASLTR--QYDHIYDDAQGXXXXXXXXXXXXXXXXXXXXXXXXXGHRVLIFSQMVMMLDIL 2170
            A+LTR  +++   +  Q                          GHRVLIFSQMV MLDIL
Sbjct: 754  AALTRPIEFETQRNSQQDVVQQLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDIL 813

Query: 2169 QEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVI 1990
             EYLQ R F  QRLDGS++ +LRKQALDH+NA GSTDF FLLSTRAGGLGINLATADTVI
Sbjct: 814  AEYLQKRHFSFQRLDGSIKGELRKQALDHFNAEGSTDFCFLLSTRAGGLGINLATADTVI 873

Query: 1989 IFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRM 1810
            IFDSDWNPQNDLQA +RAHRIGQ   VNIYRLVT  SVEE IVERAK+K+VLDHLVIQRM
Sbjct: 874  IFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTAHSVEENIVERAKQKMVLDHLVIQRM 933

Query: 1809 DTTGKTVLSKNATASGSVPFDKQELSAILKFGAVXXXXXXXXXXXXXEVDIDRILMGAET 1630
            DTTG+TVL KN  ++ S PF+K ELSAILKFGA                DID IL  AET
Sbjct: 934  DTTGRTVLDKNGGSNTSNPFNKDELSAILKFGAEELFKEEEDGDEELVCDIDEILRRAET 993

Query: 1629 REAEEEVMKENELLSSFKYANFAIDEEKDIAAA-----------------TDEWAAIIPE 1501
            R+ E   M  +ELLS+F    F  DE+K ++ A                 T +W  IIP+
Sbjct: 994  RD-EAPGMPGDELLSAFNVTTFDFDEDKVVSGAKPIGGAPGGGAADQDQDTKDWDEIIPK 1052

Query: 1500 EDRNRILEEERMKELAEMNLAPRQ 1429
              R  +  EER +E+ ++ L PR+
Sbjct: 1053 SYRELVEAEERDREIKDLYLPPRR 1076



 Score =  140 bits (354), Expect = 2e-31
 Identities = 81/211 (38%), Positives = 122/211 (57%), Gaps = 16/211 (7%)
 Frame = -1

Query: 1335 VGNFTIPEIKRFIKSFRKFSMPLNRLEEIAQDAELEEHSTDEMKKLVESLSEAC------ 1174
            +  F+  E++R IKS++KF  PL RLE IA DAEL+E    +++++ + L + C
Sbjct: 1143 INGFSDAELRRLIKSYKKFPAPLKRLEAIACDAELQEKPLSDLRRVAQLLHDRCLQTMRE 1202

Query: 1173 --KKAADEFDSNEKNGDAGAAESEKKDIERKF-------KFHTCDVNLKQIERSHAELKP 1021
              K A  E       G   AA +   D ++K        K      N+K + +   EL+P
Sbjct: 1203 IAKDAEAEAGGKHHGGGGIAAAAAGADAKKKCARAAYSSKIGGASFNVKTMMQCVEELQP 1262

Query: 1020 LHEILKSEETKTSFKPPANAKLQK-GWDVDWSRPDDSALLLGVWKYGYGSWEAIKMDPTL 844
            L E++ S+  + + +   N K +   +DVDW   DDS LL G++++G GSWEA+KMDP+L
Sbjct: 1263 LDEVIPSDAAERA-RWTLNIKTRPPNFDVDWGGEDDSRLLRGIYQFGIGSWEAMKMDPSL 1321

Query: 843  GLADKIFIKDKTKKPQGKNLQVRVDYLLKLM 751
            GLADKI   D ++KPQGK+LQ R +YLLK++
Sbjct: 1322 GLADKILSNDASRKPQGKHLQSRAEYLLKVL 1352


>gi|5917757|gb|AAD56025.1| chromodomain helicase DNA binding protein 1
            [Nymphicus hollandicus]
          Length = 918

 Score =  881 bits (2277), Expect = 0.0
 Identities = 477/931 (51%), Positives = 614/931 (65%), Gaps = 31/931 (3%)
 Frame = -1

Query: 3501 QMAEELCEEYKKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWEDEKMVAPE-- 3328
            ++ ++L ++Y+ VER++AH   +  A       ++  KW GLPYS+C+WED  ++A +
Sbjct: 1    ELTDDLHKQYQIVERIIAHSNQKSAAG----YPDHYCKWQGLPYSECSWEDGALIAKKFQ 56

Query: 3327 -QIKAYYHRIENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLNWM 3151
             +I  Y+ R ++  +P K+  VL++RP+F   +  P ++   G  + +LRDYQL GLNW+
Sbjct: 57   ARIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPLYI--GGHESLELRDYQLNGLNWL 114

Query: 3150 VYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQW 2971
             ++WCKGNS ILADEMGLGKTIQ+IS L  LFH + L GP+L+VVPLST+ +WQ+E   W
Sbjct: 115  AHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTW 174

Query: 2970 APEMNLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLSSIDWAALL 2791
            A +MN VVY+GD+ SR+MIR +EW    TK++K N +LTTYEILLKDK+FL  ++WA +
Sbjct: 175  ASQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLGGLNWAFIG 234

Query: 2790 VDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKFDCWEEFE 2611
            VDEAHRLKND+SLLYK+L  F+ NH+LLITGTPLQNSLKELW+LLHFIMPEKF  WE FE
Sbjct: 235  VDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEGFE 294

Query: 2610 TAHNESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQFYKWILTK 2431
              H +    G ++LHK+LEPFLLRRVKKDVEKSLP K EQILR++M+A QKQ+YKWILT+
Sbjct: 295  EEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTR 354

Query: 2430 NYRELSKGVKGSINGFVNLVMELKKCCNHASLTR-QYDHIYDDAQGXXXXXXXXXXXXXX 2254
            NY+ LSKG KGS +GF+N++MELKKCCNH  L +   D+ + + Q
Sbjct: 355  NYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSGKLIL 414

Query: 2253 XXXXXXXXXXXGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNA 2074
                       G+RVLIFSQMV MLDIL EYL+ R+FP QRLDGS++ +LRKQALDH+NA
Sbjct: 415  LDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNA 474

Query: 2073 PGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRL 1894
             GS DF FLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA +RAHRIGQ K VNIYRL
Sbjct: 475  EGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRL 534

Query: 1893 VTKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTVLSKNATASGSVPFDKQELSAILKFG 1714
            VTKGSVEE+I+ERAK+K+VLDHLVIQRMDTTGKTVL   +T S S PF+K+ELSAILKFG
Sbjct: 535  VTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILKFG 594

Query: 1713 AVXXXXX-XXXXXXXXEVDIDRILMGAETREAEE-EVMKENELLSSFKYANFAIDEEKDI 1540
            A               E+DID IL  AETRE E   +   +ELLS FK ANF+  +E DI
Sbjct: 595  AEELFKEPEGEEQEPQEMDIDEILKRAETRENEPGPLTVGDELLSQFKVANFSNMDEDDI 654

Query: 1539 AAATD----EWAAIIPEEDRNRILEEERMKELAEMNLAPRQRKQPIPQVVXXXXXXXXXX 1372
                +     W  IIPE  R RI EEER KEL E+ + PR R     + +
Sbjct: 655  ELEPERNCRNWEEIIPEVQRRRIEEEERQKELEEIYMLPRMRN--CAKQISFNGSEGRRS 712

Query: 1371 XXXXXXXXXXKAVG--------------------NFTIPEIKRFIKSFRKFSMPLNRLEE 1252
                       ++                      F+  EI+RFIKS++KF  PL RL+
Sbjct: 713  RSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDA 772

Query: 1251 IAQDAELEEHSTDEMKKLVESLSEACKKAADEFDSNEKNGDAGAAESEKKDIERKFKFHT 1072
            +A+DAEL + S  ++++L E +   C KA  +  S ++   AG    + K     F+
Sbjct: 773  VARDAELVDKSEIDLRRLGELVHNGCIKALKDSSSGQER--AGGRLGKVKG--PTFRISG 828

Query: 1071 CDVNLKQIERSHAELKPLHEILKSE-ETKTSFKPPANAKLQKGWDVDWSRPDDSALLLGV 895
              VN K +     EL PLH+ + S+ E +  +  P + K    +D+DW + DDS LL+G+
Sbjct: 829  VQVNAKLVISHEEELAPLHKSIPSDPEERKRYVIPCHTKAAH-FDIDWGKEDDSNLLIGI 887

Query: 894  WKYGYGSWEAIKMDPTLGLADKIFIKDKTKK 802
            ++YGYGSWE IKMDP L L  KI   D  KK
Sbjct: 888  YEYGYGSWEMIKMDPDLSLTQKILPDDPDKK 918


>gi|5917756|gb|AAD56024.1| chromodomain helicase DNA binding protein 1
            [Nymphicus hollandicus]
          Length = 918

 Score =  881 bits (2277), Expect = 0.0
 Identities = 475/933 (50%), Positives = 611/933 (64%), Gaps = 33/933 (3%)
 Frame = -1

Query: 3501 QMAEELCEEYKKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWEDEKMVAPEQ- 3325
            ++ ++L ++Y+ VER++AH   +  A       +Y  KW GLPYS+C+WED  ++A +
Sbjct: 1    ELTDDLHKQYQIVERIIAHSNQKSEAG----YPDYYCKWQGLPYSECSWEDGALIAKKFQ 56

Query: 3324 --IKAYYHRIENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLNWM 3151
              I  Y+ R  +  +P K+  +LR+RP+F   +  P ++   G  + +LRDYQL GLNW+
Sbjct: 57   ACIDEYFSRNLSKTTPFKDCKILRQRPRFVALKKQPSYI--GGHESLELRDYQLNGLNWL 114

Query: 3150 VYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQW 2971
             ++WCKGNS ILADEMGLGKTIQ+IS +  LFH + L GP+L+VVPLST+ +WQ+E   W
Sbjct: 115  AHSWCKGNSCILADEMGLGKTIQTISFMNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTW 174

Query: 2970 APEMNLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLSSIDWAALL 2791
            AP+MN VVY+GD+ SR+MIR +EW    TK++K N +LTTYEILLKDK+FL  ++W  +
Sbjct: 175  APQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLGGLNWVFIG 234

Query: 2790 VDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKFDCWEEFE 2611
            VDEAHRLKND+SLLYK+L  F+ NH+LLITGTPLQNSL+ELW+LLHFIMPEKF  WE+FE
Sbjct: 235  VDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLRELWSLLHFIMPEKFSSWEDFE 294

Query: 2610 TAHNESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQFYKWILTK 2431
              H +    G ++LHK+LEPFLLRRVKKDVEKSLP K EQILR++M+A QKQ+YKWILT+
Sbjct: 295  EEHGKGREFGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTR 354

Query: 2430 NYRELSKGVKGSINGFVNLVMELKKCCNHASLTR-QYDHIYDDAQGXXXXXXXXXXXXXX 2254
            NY+ LSKG KGS +GF+N++MELKKCCNH  L +   D+ + + Q
Sbjct: 355  NYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSGKLIL 414

Query: 2253 XXXXXXXXXXXGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNA 2074
                       G+RVLIFSQMV MLDIL EYL+ R+FP QRLDGS++ +LRKQALDH+NA
Sbjct: 415  LDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNA 474

Query: 2073 PGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRL 1894
             GS DF FLLSTRAGGLGINLA+ADTV+IFDSDWNPQNDLQA +RAHRIGQ K VNIYRL
Sbjct: 475  EGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRL 534

Query: 1893 VTKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTVLSKNATASGSVPFDKQELSAILKFG 1714
            VTKGSVEE+I+ERAK+K+VLDHLVIQRMDTTGKTVL   +T S S PF+K+ELSAILKFG
Sbjct: 535  VTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILKFG 594

Query: 1713 AVXXXXX-XXXXXXXXEVDIDRILMGAETREAEE-EVMKENELLSSFKYANFAIDEEKDI 1540
            A               E+DID IL  AETRE E   +    ELLS FK ANF+  +E DI
Sbjct: 595  AEELFKEPEGEEEEPQEMDIDEILKRAETRENEPGPITVGEELLSQFKVANFSNMDEDDI 654

Query: 1539 AAATDE----WAAIIPEEDRNRILEEERMKELAEMNLAPRQRKQPIPQVVXXXXXXXXXX 1372
                ++    W  IIPE  R RI EEER KEL ++ + PR R     + +
Sbjct: 655  ELEPEQNLRNWEEIIPEVQRRRIEEEERQKELEKIYMLPRMRN--CAKQISFNGSERRHS 712

Query: 1371 XXXXXXXXXXKAVG--------------------NFTIPEIKRFIKSFRKFSMPLNRLEE 1252
                       ++                      F+  EI+RFIKS++KF  PL RL+
Sbjct: 713  RSRRYSGSDSDSISERKRPRKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDA 772

Query: 1251 IAQDAELEEHSTDEMKKLVESLSEACKKAADE--FDSNEKNGDAGAAESEKKDIERKFKF 1078
            IA+DAEL + S  ++++L E +   C KA ++  F      G  G  +         F+
Sbjct: 773  IARDAELVDKSETDLRRLGELVHNGCIKALNDNSFVQERAAGRLGKVKGP------TFRI 826

Query: 1077 HTCDVNLKQIERSHAELKPLHEILKSE-ETKTSFKPPANAKLQKGWDVDWSRPDDSALLL 901
                VN K +     EL PLH+ + S+ E +  +  P + K    +D+DW + DDS LL+
Sbjct: 827  SGVQVNAKLVISHEEELAPLHKSIPSDPEERKRYVIPCHTKAAH-FDIDWCKEDDSNLLI 885

Query: 900  GVWKYGYGSWEAIKMDPTLGLADKIFIKDKTKK 802
            G+++YGYGSWE IKMDP L L  KI   D  KK
Sbjct: 886  GIYEYGYGSWEMIKMDPDLSLTQKILPDDPDKK 918


>gi|48137452|ref|XP_393364.1| similar to SD21488p [Apis mellifera]
          Length = 1517

 Score =  830 bits (2145), Expect = 0.0
 Identities = 408/681 (59%), Positives = 511/681 (74%), Gaps = 5/681 (0%)
 Frame = -1

Query: 3816 ETVERVIKWRHGVPGATGSATTCYNIADKGDPN-DQIPGDKTEQQFFVKWTGWSHLHNTW 3640
            ET+ER++  R G  G TG+ TT Y + + GDPN + +  ++TE Q+ +KW GWSH+HNTW
Sbjct: 363  ETIERILGQRIGKKGVTGNVTTIYAVEENGDPNPEDLSREETELQYLIKWKGWSHIHNTW 422

Query: 3639 ESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSADKEYIEFFECEQQMAEELCEEYKKVE 3460
            ESE SL     KGLKK+ N++K+++E++ W+  A  E I++FEC+ ++ ++L + Y  VE
Sbjct: 423  ESEESLKAQKVKGLKKLDNFIKREREIKQWRDYAGPEDIDYFECQLELQQDLLKSYNNVE 482

Query: 3459 RVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWEDEKMVA---PEQIKAYYHRIENLK 3289
            R++A     D     S   +Y  KW  LPY++ TWED  ++    PE+IK +  R E+ +
Sbjct: 483  RIIAEYNKPD-----SEHPDYYCKWESLPYAEATWEDGALIVKKWPEKIKEFREREESKR 537

Query: 3288 SPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLNWMVYAWCKGNSSILAD 3109
            +P+K+  VL+ RPKF + +  PD++    + T  LRDYQ++GLNWM+++WCK NS ILAD
Sbjct: 538  TPSKHCKVLKSRPKFHQLKGQPDYMGKGRDLT--LRDYQMDGLNWMIHSWCKENSVILAD 595

Query: 3108 EMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQWAPEMNLVVYMGDVV 2929
            EMGLGKTIQ+I  L  LFH + L GP+L+VVPLSTM +WQ+E +QWAP+MN V Y+GDV
Sbjct: 596  EMGLGKTIQTICFLYYLFHTHQLYGPFLLVVPLSTMTSWQREMSQWAPDMNFVTYLGDVT 655

Query: 2928 SRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLSSIDWAALLVDEAHRLKNDESLL 2749
            SR++IR+YEW    +K++K NAILTTYEI+LKDKAFL +++WA LLVDEAHRLKND+SLL
Sbjct: 656  SRNVIREYEWCYS-SKRLKFNAILTTYEIVLKDKAFLGALNWAVLLVDEAHRLKNDDSLL 714

Query: 2748 YKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKFDCWEEFETAHNESNHKGISAL 2569
            YK+L +F  NH+LLITGTPLQNSLKELWALLHFIMP KF  WEEFE  H+ +  KG S L
Sbjct: 715  YKALAEFHTNHRLLITGTPLQNSLKELWALLHFIMPTKFGSWEEFEKEHDNAAQKGYSKL 774

Query: 2568 HKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQFYKWILTKNYRELSKGVKGSIN 2389
            HK+LEPF+LRRVKKDVEKSLP K EQILRV+MT+ QKQ+YKWILTKNY  L KGVKGS
Sbjct: 775  HKQLEPFILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNYNALRKGVKGSTM 834

Query: 2388 GFVNLVMELKKCCNHASLTRQYDH-IYDDAQGXXXXXXXXXXXXXXXXXXXXXXXXXGHR 2212
             F+N+V+ELKKCCNHA LT+  ++   D+ +                          GHR
Sbjct: 835  TFLNIVIELKKCCNHAFLTKPTENERKDNNEDYLQQLIRGSGKLVLLDKLLVRLRETGHR 894

Query: 2211 VLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRA 2032
            VLIFSQMV MLDIL EYLQ + FP QRLDGS++ +LRKQALDH+NA GS DF FLLSTRA
Sbjct: 895  VLIFSQMVRMLDILGEYLQKKHFPFQRLDGSIKGELRKQALDHFNAEGSQDFCFLLSTRA 954

Query: 2031 GGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERA 1852
            GGLGINLATADTVIIFDSDWNPQNDLQA +RAHRIGQ   VNIYRLVTK SVEEEIVERA
Sbjct: 955  GGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTKNSVEEEIVERA 1014

Query: 1851 KRKLVLDHLVIQRMDTTGKTV 1789
            K+K+VLDHLVIQRMDTTG+T+
Sbjct: 1015 KQKMVLDHLVIQRMDTTGRTL 1035



 Score = 48.5 bits (114), Expect = 0.001
 Identities = 24/51 (47%), Positives = 33/51 (64%)
 Frame = -1

Query: 903  LGVWKYGYGSWEAIKMDPTLGLADKIFIKDKTKKPQGKNLQVRVDYLLKLM 751
            LG++++G GSWEAIKMD  L L DK+       K Q K +  R +YLLK++
Sbjct: 1050 LGIYQHGMGSWEAIKMDNNLKLGDKLL--PNGSKLQLKKINTRAEYLLKVL 1098


>gi|20152037|gb|AAM11378.1| LD39323p [Drosophila melanogaster]
          Length = 1101

 Score =  799 bits (2064), Expect = 0.0
 Identities = 443/856 (51%), Positives = 558/856 (64%), Gaps = 49/856 (5%)
 Frame = -1

Query: 3171 LEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAW 2992
            ++GLNW++++WCK NS ILADEMGLGKTIQ+I  L SLF  + L GP+L VVPLSTM AW
Sbjct: 1    MDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLYGPFLCVVPLSTMTAW 60

Query: 2991 QKEFAQWAPEMNLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLSS 2812
            Q+EF  WAP+MN+V Y+GD+ SR++I+QYEW    +K++K N ILTTYEI+LKDK FL +
Sbjct: 61   QREFDLWAPDMNVVTYLGDIKSRELIQQYEWQFESSKRLKFNCILTTYEIVLKDKQFLGT 120

Query: 2811 IDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKF 2632
            + WAALLVDEAHRLKND+SLLYKSL +F  NH+LLITGTPLQNSLKELWALLHFIMP+KF
Sbjct: 121  LQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLHFIMPDKF 180

Query: 2631 DCWEEFETAHNESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQF 2452
            D WE FE  H  +  KG + LH++LEP++LRRVKKDVEKSLP K EQILRV+MT+ QKQ+
Sbjct: 181  DTWENFEVQHGNAEDKGYTRLHQQLEPYILRRVKKDVEKSLPAKVEQILRVEMTSLQKQY 240

Query: 2451 YKWILTKNYRELSKGVKGSINGFVNLVMELKKCCNHASLTR--QYDHIYDDAQGXXXXXX 2278
            YKWILTKN+  L KG +GS + F+N+V+ELKKCCNHA+L R  +++ +
Sbjct: 241  YKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDEALQTLL 300

Query: 2277 XXXXXXXXXXXXXXXXXXXGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRK 2098
                               GHRVLIFSQMV MLD+L +YLQ R FP QRLDGS++ ++R+
Sbjct: 301  KGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRR 360

Query: 2097 QALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQT 1918
            QALDH+NA GS DF FLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQA +RAHRIGQ
Sbjct: 361  QALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQK 420

Query: 1917 KTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTVLSK--NATASGSVPFDK 1744
              VNIYRLVT  SVEE+IVERAK+K+VLDHLVIQRMDTTG+TVL K  N  +S S PF+K
Sbjct: 421  NQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSGNGHSSNSNPFNK 480

Query: 1743 QELSAILKFGAVXXXXXXXXXXXXXEVDIDRILMGAETREAEEEVMKENELLSSFKYANF 1564
             +LSAILKFGA                DID IL  AETR  + E M  ++LLS+FK A+
Sbjct: 481  DDLSAILKFGAEELFKDEQEHDDDLVCDIDEILRRAETRNEDPE-MPADDLLSAFKVASI 539

Query: 1563 AIDEE--------KDIAAATDE-----WAAIIPEEDRNRILEEERMKELAEMNLAPRQR- 1426
            A  EE        +D  AA +E     W  IIPE  R  I ++ER KE+ ++ L PR++
Sbjct: 540  AAFEEEPSDSVSKQDQNAAGEEDDSKDWDDIIPEGFRKAIDDQERAKEMEDLYLPPRRKT 599

Query: 1425 -----------------KQPIPQ-------VVXXXXXXXXXXXXXXXXXXXXKAVGNFTI 1318
                             KQ            +                    + +  FT
Sbjct: 600  AANQNEGKRGAGKGGKGKQQADDSGGDSDYELGSDGSGDDGRPRKRGRPTMKEKITGFTD 659

Query: 1317 PEIKRFIKSFRKFSMPLNRLEEIAQDAELEEHSTDEMKKLVESLSEACKKAADEFDSNEK 1138
             E++RFI+S++KF  PL+R+E IA DAEL+E    E+K+L E L + C +   E    E
Sbjct: 660  AELRRFIRSYKKFPAPLHRMEAIACDAELQEKPLAELKRLGEMLHDRCVQFLHEHKEEES 719

Query: 1137 ----NGDAGAAESEKKDIERKFKFHTCDVNLKQIERSHAELKPLHEILKS---EETKTSF 979
                  +   A+  +       K      N K++     EL+PL+EI+ S   E  + SF
Sbjct: 720  KTAATDETPGAKQRRARATFSVKLGGVSFNAKKLLACEQELQPLNEIMPSMPEERQQWSF 779

Query: 978  KPPANAKLQKGWDVDWSRPDDSALLLGVWKYGYGSWEAIKMDPTLGLADKIFIKDKTKKP 799
                 A +   +DVDW   +D+ LL G+++YG GSWE +K+DPTL L DKI + D T+KP
Sbjct: 780  NIKTRAPV---FDVDWGIEEDTKLLCGIYQYGIGSWEQMKLDPTLKLTDKILLND-TRKP 835

Query: 798  QGKNLQVRVDYLLKLM 751
            Q K LQ R +YLLK++
Sbjct: 836  QAKQLQTRAEYLLKII 851


>gi|47211143|emb|CAF96563.1| unnamed protein product [Tetraodon
            nigroviridis]
          Length = 1919

 Score =  754 bits (1948), Expect = 0.0
 Identities = 436/920 (47%), Positives = 542/920 (58%), Gaps = 123/920 (13%)
 Frame = -1

Query: 3816 ETVERVIKWRHGVPGATGSATTCYNIADKGDPNDQI-----PGDKTEQQFFVKWTGWSHL 3652
            ETVERV+  R G   ATGSATT Y +   GDPN        PGD    Q+ +KW
Sbjct: 253  ETVERVMDSRIGRKRATGSATTVYAVEADGDPNADFSPSREPGDV---QYLIKWP----- 304

Query: 3651 HNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSADKEYIEFFECEQQMAEELCEEY 3472
                                       QK+            IE+F C++++ ++L  +Y
Sbjct: 305  --------------------------LQKD------------IEYFNCQEELMDDLHSQY 326

Query: 3471 KKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWEDEKMVAPE---QIKAYYHRI 3301
            + VER++ H   +  A       +YL KW GLPYS+C+WED  ++A +   +I  Y  R
Sbjct: 327  QLVERIIGHSNQKSAAG----YPDYLCKWQGLPYSECSWEDGALIAKKFQKRIDDYMSRH 382

Query: 3300 ENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLNWMVYAWCKGNSS 3121
            ++   P+++  VL++RP+F   +  P F+    E    LRDYQL+GLNWM ++WCKGNS
Sbjct: 383  QSKTIPSRDCKVLKQRPRFVPMKKQPAFIDEGLE----LRDYQLDGLNWMAHSWCKGNSC 438

Query: 3120 ILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQWAPEMNLVVYM 2941
            ILADEMGLGKTIQ+I  L  LF  + L GP+L+VVPLST+ +WQ+E   WAP+MN+VVY+
Sbjct: 439  ILADEMGLGKTIQTICFLNYLFSEHQLYGPFLLVVPLSTLTSWQREIQLWAPQMNVVVYL 498

Query: 2940 GDVVSRDM----------------------------------------------IRQYEW 2899
            GD+ SR M                                              IR +EW
Sbjct: 499  GDISSRTMVGLCFCLLLAPSLPACLPVCVCVCVCVCVREREKTGLLTSFLPVYQIRTHEW 558

Query: 2898 FVGGTKKMKINAILTTYEILLKDK--------------------AFLSSIDWAALLVDEA 2779
                +K+MK N +LTTYEILLKDK                    +FL  ++WA + VDEA
Sbjct: 559  IHVHSKRMKFNILLTTYEILLKDKVGLFVAPSSLSGGRPGLPVLSFLGGVNWAFIGVDEA 618

Query: 2778 HRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKFDCWEEFETAHN 2599
            HRLKND+SLLYK++ +F+ NH+LLITGTPLQNSLKELW+LLHFIMP+KF  WE FE  H
Sbjct: 619  HRLKNDDSLLYKTMMEFKSNHRLLITGTPLQNSLKELWSLLHFIMPDKFHSWELFEEEHG 678

Query: 2598 ESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQFYKWILTKNYRE 2419
            +    G ++LHK+LEPFLLRRVKKDVEKSLP K EQILRV+M+A QKQ+YKWILT+NY+
Sbjct: 679  KGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAIQKQYYKWILTRNYKA 738

Query: 2418 LSKGVKGSINGFVNLVMELKKCCNHASLTRQYDHIYDDAQGXXXXXXXXXXXXXXXXXXX 2239
            LSKGVKGS +GF+N++MELKKCCNH  L R  +   + ++
Sbjct: 739  LSKGVKGSTSGFLNIMMELKKCCNHCYLVRPPEEDLNKSEALQQLVRSSGKLVLLDKLLI 798

Query: 2238 XXXXXXGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGST- 2062
                   HRVLIFSQMV MLDIL +YL+ R+F  QRLDGS++ ++RKQALDH+NA GS
Sbjct: 799  RLKERG-HRVLIFSQMVRMLDILADYLRSRQFLFQRLDGSIKGEMRKQALDHFNAEGSEV 857

Query: 2061 --------------------------DFAFLLSTRAGGLGINLATADTVIIFDSDWNPQN 1960
                                      DF FLLSTRAGGLGINLA+ADTV+IFDSDWNPQN
Sbjct: 858  RGHAGSAWPGSRSSLTAPAPLPLCLQDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQN 917

Query: 1959 DLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTVLSK 1780
            DLQA +RAHRIGQ + VNIYRLVTKGSVEE+I+ERAK+K+VLDHLVIQRMDTTGKTVL
Sbjct: 918  DLQAQARAHRIGQKRQVNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLHT 977

Query: 1779 NATASGSVPFDKQELSAILKFGAVXXXXX-------------------XXXXXXXXEVDI 1657
             A  S S PF+K+ELSAILKFGA                                 E+DI
Sbjct: 978  GAAPSSSAPFNKEELSAILKFGAEELFKEPEGEEQEPQVGAGPDGGGPLAQARSGPEMDI 1037

Query: 1656 DRILMGAETREAEE-EVMKENELLSSFKYANFAI--DEEKDIAAATDEWAAIIPEEDRNR 1486
            D IL  AETRE +        ELLS FK ANF++  DEE D   +   W  IIPEE R R
Sbjct: 1038 DEILKRAETRENDPGPSTVGEELLSQFKVANFSMMEDEEMDSERSQRSWDDIIPEEQRRR 1097

Query: 1485 ILEEERMKELAEMNLAPRQR 1426
            + EEER KEL E+ L PR R
Sbjct: 1098 LEEEERQKELEEIYLLPRMR 1117



 Score =  106 bits (265), Expect = 4e-21
 Identities = 61/187 (32%), Positives = 90/187 (47%), Gaps = 27/187 (14%)
 Frame = -1

Query: 1227 EHSTDEMKKLVESLSEACKKAADEFDSNEKNGDAGAAESEKKDIER-------------- 1090
            E S  ++K+L E++   C +   E     +    G      +  ER
Sbjct: 1225 EKSEHDLKRLAETVHNGCVRTLRENPCGPEKASGGTPPGPVRTAERVRGWQETQAHAAVC 1284

Query: 1089 ------------KFKFHTCDVNLKQIERSHAELKPLHEILKSE-ETKTSFKPPANAKLQK 949
                         F+     VN K +     EL PLH+ + ++ E +  +  P ++K
Sbjct: 1285 SPGGKRGKVKGPTFRISGVQVNAKLVISHEQELAPLHKAIPADPEDRKRYVIPCHSKAAH 1344

Query: 948  GWDVDWSRPDDSALLLGVWKYGYGSWEAIKMDPTLGLADKIFIKDKTKKPQGKNLQVRVD 769
             +D+DW + DDS+LL+G+++YGYGSWE IKMDP L L  K+   D  KKPQ K LQ R D
Sbjct: 1345 -FDIDWGKEDDSSLLVGIYEYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRAD 1403

Query: 768  YLLKLMS 748
            YL+KL+S
Sbjct: 1404 YLIKLLS 1410


>gi|50761329|ref|XP_429117.1| PREDICTED: similar to chromodomain
            helicase DNA binding protein 1, partial [Gallus gallus]
          Length = 616

 Score =  747 bits (1928), Expect = 0.0
 Identities = 365/620 (58%), Positives = 466/620 (74%), Gaps = 4/620 (0%)
 Frame = -1

Query: 3612 NAKGLKKVQNYVKKQKEVEMWKRSADKEYIEFFECEQQMAEELCEEYKKVERVVAHQTSR 3433
            N KG+KK+ NY KK +E + W ++A  E +E++ C+Q+  ++L ++Y+ VER++AH   +
Sbjct: 3    NVKGMKKLDNYKKKCQETKRWLKNASPEDVEYYNCQQEFTDDLHKQYQVVERIIAHSNQK 62

Query: 3432 DRAADGSMATEYLIKWSGLPYSDCTWEDEKMVAPEQ---IKAYYHRIENLKSPNKNSNVL 3262
              A       +Y  KW GLPYS+C+WED  ++A +    I  Y+ R ++  +P K+  +L
Sbjct: 63   SAAG----YPDYYCKWQGLPYSECSWEDGALIAKKFQACIDEYFSRNQSKTTPFKDCKIL 118

Query: 3261 RKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQ 3082
            ++RP+F   +  P ++   G    +LRDYQL GLNW+ ++WCKGNS ILADEMGLGKTIQ
Sbjct: 119  KQRPRFVALKKQPFYI--GGRDCLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQ 176

Query: 3081 SISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQWAPEMNLVVYMGDVVSRDMIRQYE 2902
            +IS L  LFH ++L GP+L+VVPLST+ +WQ+E   WAP+MN VVY+GD+ SR+MIR +E
Sbjct: 177  TISFLNYLFHEHELYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHE 236

Query: 2901 WFVGGTKKMKINAILTTYEILLKDKAFLSSIDWAALLVDEAHRLKNDESLLYKSLTQFRF 2722
            W    TK++K N +LTTYEILLKDK+FL  ++W  + +DEAHRLKND+SLLYK+L  F+
Sbjct: 237  WMHPQTKRLKFNILLTTYEILLKDKSFLGGLNWVFIGIDEAHRLKNDDSLLYKTLIDFKS 296

Query: 2721 NHKLLITGTPLQNSLKELWALLHFIMPEKFDCWEEFETAHNESNHKGISALHKKLEPFLL 2542
            NH+LLITGTPLQNSLKELW+LLHFIMPEKF  WE+FE  H +    G ++LHK+LEPFLL
Sbjct: 297  NHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREFGYASLHKELEPFLL 356

Query: 2541 RRVKKDVEKSLPPKTEQILRVDMTAHQKQFYKWILTKNYRELSKGVKGSINGFVNLVMEL 2362
            RRVKKDVEKSLP K EQILR++M+A QKQ+YKWILT+NY+ LSKG KGS +GF+N++MEL
Sbjct: 357  RRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMEL 416

Query: 2361 KKCCNHASLTR-QYDHIYDDAQGXXXXXXXXXXXXXXXXXXXXXXXXXGHRVLIFSQMVM 2185
            KKCCNH  L +   D+ + + Q                          G+RVLIFSQMV
Sbjct: 417  KKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVR 476

Query: 2184 MLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLAT 2005
            MLDIL EYL+ R+FP QRLDGS++ +LRKQALDH+NA GS DF FLLSTRAGGLGINLA+
Sbjct: 477  MLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLAS 536

Query: 2004 ADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHL 1825
            ADTV+IFDSDWNPQNDLQA +RAHRIGQ K VNIYRLVTKGSVEE+I+ERAK+K+VLDHL
Sbjct: 537  ADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHL 596

Query: 1824 VIQRMDTTGKTVLSKNATAS 1765
            VIQRMDTTGKTVL   +T S
Sbjct: 597  VIQRMDTTGKTVLHTGSTPS 616


>gi|34854132|ref|XP_238731.2| similar to
            Chromodomain-helicase-DNA-binding protein 1 (CHD-1)
            [Rattus norvegicus]
          Length = 882

 Score =  687 bits (1774), Expect = 0.0
 Identities = 345/645 (53%), Positives = 445/645 (68%), Gaps = 9/645 (1%)
 Frame = -1

Query: 3816 ETVERVIKWRHGVPGATGSATTCYNIADKGDPN-----DQIPGDKTEQQFFVKWTGWSHL 3652
            ET+ER +  R G  GATG+ TT Y I   GDPN      + PGD    Q+ +KW GWSH+
Sbjct: 270  ETIERFMDCRVGRKGATGATTTIYAIEADGDPNAGFEKSKEPGDV---QYLIKWKGWSHI 326

Query: 3651 HNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSADKEYIEFFECEQQMAEELCEEY 3472
            HNTWE+E +L   N +G+KK+ NY KK +E + W ++A  E +E++ C+Q++ ++L ++Y
Sbjct: 327  HNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQY 386

Query: 3471 KKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWEDEKMVAPEQ---IKAYYHRI 3301
            + VER++AH   +  A       +Y  KW GLPYS+C+WED  +++ +    I  Y+ R
Sbjct: 387  QIVERIIAHSNQKSAAG----LPDYYCKWQGLPYSECSWEDGALISKKFQTCIDEYFSRN 442

Query: 3300 ENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLNWMVYAWCKGNSS 3121
            ++  +P K+  VL++RP+F   +  P ++   G    +LRDYQL GLNW+ ++WCKGNS
Sbjct: 443  QSKTTPFKDCKVLKQRPRFVALKKQPSYI--GGHEGLELRDYQLNGLNWLAHSWCKGNSC 500

Query: 3120 ILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQWAPEMNLVVYM 2941
            ILADEMGLGKTIQ+IS L  LFH + L GP+L+VVPLST+ +WQ+E   WA +MN VVY+
Sbjct: 501  ILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYL 560

Query: 2940 GDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLSSIDWAALLVDEAHRLKND 2761
            GD+ SR+MIR +EW    TK++K N +LTTYEILLKDKAFL  ++WA + VDEAHRLKND
Sbjct: 561  GDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKND 620

Query: 2760 ESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKFDCWEEFETAHNESNHKG 2581
            +SLLYK+L  F+ NH+LLITGTPLQNSLKELW+LLHFIMPEKF  WE+FE  H +    G
Sbjct: 621  DSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYG 680

Query: 2580 ISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQFYKWILTKNYRELSKGVK 2401
             ++LHK+LEPFLLRRVKKDVEKSLP K EQILR++M+A QKQ+YKWILT+NY+ LSKG K
Sbjct: 681  YASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSK 740

Query: 2400 GSINGFVNLVMELKKCCNHASLTRQYD-HIYDDAQGXXXXXXXXXXXXXXXXXXXXXXXX 2224
            GS +GF+N++MELKKCCNH  L +  D + + + Q
Sbjct: 741  GSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRE 800

Query: 2223 XGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLL 2044
             G+RVLIFSQMV MLDIL EYL+ R+FP Q                        DF FLL
Sbjct: 801  RGNRVLIFSQMVRMLDILAEYLKYRQFPFQ------------------------DFCFLL 836

Query: 2043 STRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTV 1909
            STRAGGLGINLA+ADTV+IFDSDWNPQNDLQA +RAHRIGQ K V
Sbjct: 837  STRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 881


>gi|49077756|ref|XP_402701.1| hypothetical protein UM05086.1 [Ustilago
            maydis 521]
 gi|46097644|gb|EAK82877.1| hypothetical protein UM05086.1 [Ustilago
            maydis 521]
          Length = 1834

 Score =  683 bits (1763), Expect = 0.0
 Identities = 431/1212 (35%), Positives = 638/1212 (52%), Gaps = 67/1212 (5%)
 Frame = -1

Query: 3735 DKGDPNDQIPGDKTEQQFFVKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKK---QK 3565
            D+ D  + IP      +F VKW G+SHLH+T E+ + L     +G K+V NY+K    ++
Sbjct: 406  DRLDDKEDIPTQN--MRFIVKWKGYSHLHDTHETYDFLR--RYRGFKRVDNYIKSVLLRE 461

Query: 3564 EVEMWKRSADKEYIEFFECEQQMAEELCEEYKKVERVVAHQTSRDRAADGSMATEYLIKW 3385
            +  +   +A +E +E  + E++   EL E +K VER++A + +            YL+KW
Sbjct: 462  KALLSDPNASREDVEALQIEKERQIELIESFKTVERIIAQRDNHANKDIPYPHLAYLVKW 521

Query: 3384 SGLPYSDCTWEDE---KMVAPEQIKAYYHRIENLKSPNKNSNVLRKRPKFEKFESMPDFL 3214
             GLPY+DCTWE E   K +A + I AY  R      P ++ N  + RPK+ +    P ++
Sbjct: 522  KGLPYADCTWEAEQEIKDIAQDAINAYVKRSATTTVPWRSQNFSQGRPKYTRMTEQPAYI 581

Query: 3213 KTDGESTHKLRDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAG 3034
                 S   L+D+Q+ GLNW+ Y W K  + ILADEMGLGKT+Q++S L+ LFH     G
Sbjct: 582  -----SAGTLKDFQMTGLNWLAYLWSKNENGILADEMGLGKTVQTVSFLSYLFHSCYQYG 636

Query: 3033 PYLVVVPLSTMAAWQKEFAQWAPEMNLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILT 2854
            P+LVVVPLST+ AW  +F  WAP++N + YMG+  SR+MIR+YE+  G  KKMK N ++T
Sbjct: 637  PFLVVVPLSTLPAWMNQFEHWAPDLNAIAYMGNSASREMIREYEF--GPAKKMKFNVLVT 694

Query: 2853 TYEILLKDKAFLSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLK 2674
            TYE +LKD+A L  + W  L VDEAHRLKN E+ LY++L  F    KLLITGTPLQN++K
Sbjct: 695  TYEFILKDRAELGQVKWQYLAVDEAHRLKNSEAQLYEALNSFHAAGKLLITGTPLQNNVK 754

Query: 2673 ELWALLHFIMPEKFDCWEEFETAHNESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTE 2494
            EL ALLHF+ P++FD   +F+   N  +   I  LH+KL+  +LRR+KKDV K LP K+E
Sbjct: 755  ELIALLHFLRPDQFDLDVDFDI--NNVDQTVIKELHEKLDNVMLRRLKKDVIKELPTKSE 812

Query: 2493 QILRVDMTAHQKQFYKWILTKNYRELSKGVKGSINGFVNLVMELKKCCNHASLTRQYDHI 2314
            +ILRV+M+A Q++ YK ILT+NY  LS       +  +N+ +ELKK  NH  L    + I
Sbjct: 813  KILRVEMSAMQQRMYKAILTRNYSLLSGATTAQFS-LLNIAIELKKASNHPYLFDGTEII 871

Query: 2313 YDDAQGXXXXXXXXXXXXXXXXXXXXXXXXXGHRVLIFSQMVMMLDILQEYLQLRRFPSQ 2134
             D+ +                          GHRVLIFSQMV MLDIL +Y+ LR +  Q
Sbjct: 872  SDNREETLKGLVMHSGKMVLLDKLLARLKADGHRVLIFSQMVRMLDILSDYMSLRGYIHQ 931

Query: 2133 RLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDL 1954
            RLDG++ +++RK+A++H+NA GS DFAFLLSTRAGGLGINL TADTVIIFDSDWNPQNDL
Sbjct: 932  RLDGTVSSEIRKKAIEHFNAEGSPDFAFLLSTRAGGLGINLETADTVIIFDSDWNPQNDL 991

Query: 1953 QAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTVLSKNA 1774
            QAM+RAHR+     V+++R +TK +VEE+++ERAKRK+VL++ +I +MDT+G T  +  A
Sbjct: 992  QAMARAHRLNSKFHVSVFRFLTKDTVEEDVLERAKRKMVLEYAIIHQMDTSG-TNFAPKA 1050

Query: 1773 TASGSVPFDKQELSAILKFGA---VXXXXXXXXXXXXXEVDIDRILMGAETREAEEEVMK 1603
            +A     F K+EL AILKFGA                 E+D+D IL  AE  E E +
Sbjct: 1051 SAKNQQQFSKEELGAILKFGAQNMFKSDNEDGQQKKLDEMDLDDILSHAEAHETEADPTG 1110

Query: 1602 EN----ELLSSFKYANFAIDEEKDIAAATDEWAAIIPEEDRNRILEEERMKELAE-MNLA 1438
             +    E L SF       D + D++     W  IIP E+R +  EEER K + E    A
Sbjct: 1111 SSAGGQEFLKSFAQVQ---DFKADLS-----WDDIIPLEERQKAEEEERKKAVEEAAAAA 1162

Query: 1437 PRQRKQPIPQVVXXXXXXXXXXXXXXXXXXXXKAVG------------NFTIPEIKRFIK 1294
               R++   QV                      A                   +++  I+
Sbjct: 1163 STSRRRAAAQVAPGTYDNGEADDPSTSPGAAKDAAAKRARKTAAQRSVEMKERDLRVLIR 1222

Query: 1293 SFRKFSMPLNRLEEIAQDAELEEHSTDEMKKLVESLSEACKKAADEFDSNEKNGDAGAAE 1114
              +++     + + I ++ +L++ +   + ++ + L + C+ A  E  +  K G     E
Sbjct: 1223 GIQRWGDIRYKTDPIIKEGKLQDKNRSVLFQISDELVKTCEDAVAEHQAFMK-GKQERGE 1281

Query: 1113 SEKKDIERKFKFHTC----DVNLKQIERSHAELKPLHEILKSEETKTSFKPPA-NAKLQK 949
                 + +K    +C     +N + +   H EL+ L E L + E    ++ P+ + K
Sbjct: 1282 EISSALRQKAVLVSCRGITGINAETVLIRHYELRLLAETLDNIEDPLEWRVPSEHLKATL 1341

Query: 948  GWDVDWSRPDDSALLLGVWKYGYGSWEAIKMDPTLGLADKIFIKDKTK------------ 805
             W   W   DD+ LL+G+WKYG+G+WE I+ DP  G+A K F+++  K
Sbjct: 1342 NWAGGWDAKDDAMLLVGIWKYGFGAWEQIEADPDFGMAGKFFLEEGKKANQEPQASEKDT 1401

Query: 804  -------KPQGK--------NLQVRVDYLLKLMSXXXXXXXXXXXXXXXXXXVPVGPEKK 670
                    PQGK        +L  R DYLLK++                        +K
Sbjct: 1402 PRSGTSGPPQGKPRPIPNAIHLVRRGDYLLKVLREYDDNAKAYQKSLAEGGGGAKSSKKA 1461

Query: 669  KRH---TNNVPQEGXXXXXXXXXXKNSSSLKDQLALLSIDKSLYGGALEDS--SAKPFLE 505
            ++    + + P               ++  +    + S D S      +DS  ++    E
Sbjct: 1462 RKSPSPSTHSPAPAGKLGKGSGGGGGAADKRRPAPVYSSDSS------DDSEYASMDEAE 1515

Query: 504  CVKLCMPVHKYMKKLKEAQEAKNQADEA----KYLTRLGDSFLENLETLIKKKPKTNIRK 337
            C +L  P  K +K+L++  +   +  +     + L+ +G      L+T           +
Sbjct: 1516 CKELMRPCKKQLKRLRDGTDHLERDQKVSVLKECLSAIGGHIDHLLDTKFASLSSKEKDR 1575

Query: 336  WYNYLWIFLCKF 301
            W+++LW F   F
Sbjct: 1576 WFHHLWAFSAFF 1587


>gi|19115879|ref|NP_594967.1| putative transcriptional regulator;
            chromodomain helicase [Schizosaccharomyces pombe]
 gi|15214050|sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3
 gi|7490233|pir||T38720 chromodomain helicase - fission yeast
            (Schizosaccharomyces pombe)
 gi|2408073|emb|CAB16277.1| SPAC3G6.01 [Schizosaccharomyces pombe]
          Length = 1388

 Score =  682 bits (1759), Expect = 0.0
 Identities = 437/1205 (36%), Positives = 654/1205 (54%), Gaps = 70/1205 (5%)
 Frame = -1

Query: 3693 EQQFFVKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKR---SADKEYI 3523
            + +F +KW  +SHLH TWE  N+++++  +G KKV N++K+   ++   R   +  +E I
Sbjct: 213  DYEFLIKWVNFSHLHCTWEPYNNISMI--RGSKKVDNHIKQVILLDREIREDPTTTREDI 270

Query: 3522 EFFECEQQMAEELCEEYKKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWEDEK 3343
            E  + E++   E  EEYK+V+R+VA   +    +DGS+  EYL+KW  L Y  CTWE
Sbjct: 271  EAMDIEKERKRENYEEYKQVDRIVAKHLN----SDGSV--EYLVKWKQLLYDFCTWEASS 324

Query: 3342 MVAP---EQIKAYYHRIENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQ 3172
            ++ P    +I+A+  R E+  SP++ +N    RPK+ K E  P ++ T GE    LRD+Q
Sbjct: 325  IIEPIAATEIQAFQEREESALSPSRGTNYGNSRPKYRKLEQQPSYI-TGGE----LRDFQ 379

Query: 3171 LEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAW 2992
            L G+NWM Y W K  + ILADEMGLGKT+Q+++ L+ L H     GP+LVVVPLST+ AW
Sbjct: 380  LTGVNWMAYLWHKNENGILADEMGLGKTVQTVAFLSYLAHSLRQHGPFLVVVPLSTVPAW 439

Query: 2991 QKEFAQWAPEMNLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLSS 2812
            Q+  A WA +MN + Y+G+  SR +IR YE++V GT+K+K N +LTTYE +LKD++ LS+
Sbjct: 440  QETLALWASDMNCISYLGNTTSRQVIRDYEFYVDGTQKIKFNLLLTTYEYVLKDRSVLSN 499

Query: 2811 IDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEKF 2632
            I W  + +DEAHRLKN ES LY++L+QF+ +++LLITGTPLQN+++EL AL+ F+MP KF
Sbjct: 500  IKWQYMAIDEAHRLKNSESSLYEALSQFKNSNRLLITGTPLQNNIRELAALVDFLMPGKF 559

Query: 2631 DCWEEFE-TAHNESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAHQKQ 2455
            +  EE    A +E     I +L + L+P++LRR+KKDVEKSLP K+E+ILRV+++  Q
Sbjct: 560  EIREEINLEAPDEEQEAYIRSLQEHLQPYILRRLKKDVEKSLPSKSERILRVELSDLQMY 619

Query: 2454 FYKWILTKNYRELSKGV-KGSINGFVNLVMELKKCCNHASLTRQYDHIYD------DAQG 2296
            +YK ILT+NYR L++ +  GS    +N+V+ELKK  NH  L   +D + +      ++QG
Sbjct: 620  WYKNILTRNYRVLTQSISSGSQISLLNIVVELKKASNHPYL---FDGVEESWMQKINSQG 676

Query: 2295 ----XXXXXXXXXXXXXXXXXXXXXXXXXGHRVLIFSQMVMMLDILQEYLQLRRFPSQRL 2128
                                         GHRVLIFSQMV MLDIL +YL LR +P QRL
Sbjct: 677  RRDEVLKGLIMNSGKMVLLDKLLSRLRRDGHRVLIFSQMVRMLDILGDYLSLRGYPHQRL 736

Query: 2127 DGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQA 1948
            DG++ A +R+ ++DH+NAP S DF FLLSTRAGGLGINL TADTVIIFDSDWNPQ DLQA
Sbjct: 737  DGTVPAAVRRTSIDHFNAPNSPDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQA 796

Query: 1947 MSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTVLSKNATA 1768
            M+RAHRIGQ   V +YRL++K ++EE+++ERA+RK++L++ +I  +  T K   SKN
Sbjct: 797  MARAHRIGQKNHVMVYRLLSKDTIEEDVLERARRKMILEYAIIS-LGVTDKQKNSKND-- 853

Query: 1767 SGSVPFDKQELSAILKFGAVXXXXXXXXXXXXXEVDIDRILMGAETREAEEEV----MKE 1600
                 F  +ELSAILKFGA              ++++D IL  AE  +   +V    M
Sbjct: 854  ----KFSAEELSAILKFGASNMFKAENNQKKLEDMNLDEILEHAEDHDTSNDVGGASMGG 909

Query: 1599 NELLSSFKYANFAIDEEKDIAAATDEWAAIIPEEDRNRILEEERMKE-----LAEMNLAP 1435
             E L  F+  ++  D           W  IIP  +R +  EE+R++E       E+ L+
Sbjct: 910  EEFLKQFEVTDYKADV---------SWDDIIPLTEREKFEEEDRLREEEEALKQEIELSS 960

Query: 1434 RQRKQPIPQVVXXXXXXXXXXXXXXXXXXXXKAVGNFTIPEIKRFIKSFRKFSMPLNRLE 1255
            R+  +P P                         V      EI+   ++  ++    +R
Sbjct: 961  RRGNRPYPSSAVESPSYSGTSERKSKKQMLKDEV--LLEKEIRLLYRAMIRYGSLEHRYN 1018

Query: 1254 EIAQDAELEEHSTDEMKKLVESLSEACKKAADEFDSNEKNGDAGAAESEKKDIERKFKFH 1075
            +I + A+L       +KK+   L  A +KA    + +  N D    +S +K +   FK
Sbjct: 1019 DIVKYADLTTQDAHVIKKIAADLVTASRKAVSAAEKDLSN-DQSNNKSSRKALLITFK-G 1076

Query: 1074 TCDVNLKQIERSHAELKPLHEILKSEETKTSFKPPANAKLQKGWDVDWSRPDDSALLLGV 895
              ++N + + +   +L  L++ + +    ++F+ P + +   GW   W   +DS LL G+
Sbjct: 1077 VKNINAETLVQRLNDLDILYDAMPT-SGYSNFQIPMHVRSVHGWSCQWGPREDSMLLSGI 1135

Query: 894  WKYGYGSWEAIKMDPTLGLADKIFIKD---------------KTKKPQGKNLQVRVDYLL 760
             K+G+G+W  I+ DP L + DKIF++D               + K P   +L  R +YLL
Sbjct: 1136 CKHGFGAWLEIRDDPELKMKDKIFLEDTKQTDNSVPKDKENKEKKVPSAVHLVRRGEYLL 1195

Query: 759  KLMSXXXXXXXXXXXXXXXXXXVPVGPEKKKRHTNNVPQEGXXXXXXXXXXKNSS----- 595
              +                      G  + K+ T N  Q G          ++++
Sbjct: 1196 SALREHHQNFGIKSSPAISTN----GKTQPKKQTANRRQSGKPNVKSAQKIESATRTPSP 1251

Query: 594  ---------SLKD-----------QLALLSIDKSLYGGALEDSSAKPFLECVKLCMPVHK 475
                     S KD           +    S  KS         +A+    C +L  PV K
Sbjct: 1252 AISESRKKPSSKDTKIETPSREQSRSQTASPVKSEKDDGNVSLNAEQKARCKELMYPVRK 1311

Query: 474  YMKKLKEAQEAKNQADEAKYLTRLGDSFLENLETLIKKKP---KTNIRKWYNYLWIFLCK 304
            +MK+L++      +A+  K LT    +  +++E  +   P   K  +RK    LW+F C
Sbjct: 1312 HMKRLRKDSSGLGRAELVKLLTECLTTIGKHIEKTVNDTPSEEKATVRK---NLWMFACY 1368

Query: 303  FTLRE 289
            F  +E
Sbjct: 1369 FWPKE 1373


>gi|42569009|ref|NP_178970.2| chromodomain-helicase-DNA-binding family
            protein / CHD family protein [Arabidopsis thaliana]
          Length = 1722

 Score =  679 bits (1751), Expect = 0.0
 Identities = 423/1018 (41%), Positives = 579/1018 (56%), Gaps = 35/1018 (3%)
 Frame = -1

Query: 3702 DKTEQQFFVKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSADKEYI 3523
            D  E +F +KW G SHLH  W++ + L   N  G KKV NY KK  E   ++ +  +E I
Sbjct: 458  DWNEMEFLIKWKGQSHLHCQWKTLSDL--QNLSGFKKVLNYTKKVTEEIRYRTALSREEI 515

Query: 3522 EFFECEQQMAEELCEEYKKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWEDEK 3343
            E  +  ++M  ++ ++  +VER++A + S+D   D  +  EYL+KW GL Y++ TWE +
Sbjct: 516  EVNDVSKEMDLDIIKQNSQVERIIADRISKDGLGD--VVPEYLVKWQGLSYAEATWEKDV 573

Query: 3342 MVAPEQIKAYYHRIENLKSPNKNSNVLRKRPK----FEKFESMPDFLKTDGESTHKLRDY 3175
             +A  Q+    ++   +    +   V ++R K      K +  P++L         LRDY
Sbjct: 574  DIAFAQVAIDEYKAREVSIAVQGKMVEQQRTKGKASLRKLDEQPEWLIGG-----TLRDY 628

Query: 3174 QLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAA 2995
            QLEGLN++V +W    + ILADEMGLGKT+QS+S+L  L +   + GP+LVVVPLST+A
Sbjct: 629  QLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPFLVVVPLSTLAN 688

Query: 2994 WQKEFAQWAPEMNLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAFLS 2815
            W KEF +W P MN++VY+G   SR++  +        + +K NA+LTTYE++LKDKA LS
Sbjct: 689  WAKEFRKWLPGMNIIVYVGTRASREVRNKTNDVHKVGRPIKFNALLTTYEVVLKDKAVLS 748

Query: 2814 SIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMPEK 2635
             I W  L+VDEAHRLKN E+ LY +L +F   +KLLITGTPLQNS++ELWALLHF+ P K
Sbjct: 749  KIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQNSVEELWALLHFLDPGK 808

Query: 2634 FDCWEEF-ETAHNES--NHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAH 2464
            F   +EF E   N S  N   ++ LH +L P +LRRV KDVEKSLPPK E+ILRV+M+
Sbjct: 809  FKNKDEFVENYKNLSSFNESELANLHLELRPHILRRVIKDVEKSLPPKIERILRVEMSPL 868

Query: 2463 QKQFYKWILTKNYRELSKGVKGSINGFVNLVMELKKCCNHASLTRQYDHIYD---DAQGX 2293
            QKQ+YKWIL +N+ +L+KGV+G+    +N+V+ELKKCCNH  L    DH Y    +
Sbjct: 869  QKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDINDNSK 928

Query: 2292 XXXXXXXXXXXXXXXXXXXXXXXXGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMR 2113
                                     HRVLIFSQMV MLDIL EYL LR F  QRLDGS +
Sbjct: 929  LDKIILSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTK 988

Query: 2112 ADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH 1933
            A+LR+QA+DH+NAP S DF FLLSTRAGGLGINLATADTV+IFDSDWNPQNDLQAMSRAH
Sbjct: 989  AELRQQAMDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAH 1048

Query: 1932 RIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTVLSKNATASGSVP 1753
            RIGQ + VNIYR VT  SVEEEI+ERAKRK+VLDHLVIQ+++  G+  L K  T  GS
Sbjct: 1049 RIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLNAEGR--LEKRETKKGS-N 1105

Query: 1752 FDKQELSAILKFGA----VXXXXXXXXXXXXXEVDIDRILMGAETREAEEEVMKENELLS 1585
            FDK ELSAIL+FGA                   +DID IL  AE  E +     E+ELL
Sbjct: 1106 FDKNELSAILRFGAEELFKEDKNDEESKKRLLSMDIDEILERAEQVEEKHTDETEHELLG 1165

Query: 1584 SFKYANFAIDEE---------KDIAAATDEWAAIIPEEDRNR------ILEEERMKELAE 1450
            +FK ANF   E+         K  +  T E  A+ P   RN          +   K   +
Sbjct: 1166 AFKVANFCNAEDDGSFWSRWIKPDSVVTAE-EALAPRAARNTKSYVDPSHPDRTSKRKKK 1224

Query: 1449 MNLAPRQRKQPIPQVVXXXXXXXXXXXXXXXXXXXXKAVGNFTIPEIKRFIKSFRKFSMP 1270
             +  P   ++   +                       + GN    + +RF ++  KF
Sbjct: 1225 GSEPPEHTERSQKRRKTEYFVPSTPLLEGTSAQVRGWSYGNLPKRDAQRFYRTVMKFGNH 1284

Query: 1269 LNRLEEIAQD--AELEEHSTDEMKKLVESLSEACKKAADEFDSNEKNGDAGAAESEKKDI 1096
             N++  IA++    +E    +   +L ++L + CK++ +  +   K           K
Sbjct: 1285 -NQMACIAEEVGGVVEAAPEEAQVELFDALIDGCKESVETGNFEPKGPVLDFFGVPVKAN 1343

Query: 1095 ERKFKFHTCDVNLKQIERSHAELKPLHEILKSEETKTSFKPPANAKLQKGWDVDWSRPDD 916
            E   +     +  K+I R +  +        S+    S+  P+N    KG    W++ DD
Sbjct: 1344 ELLKRVQGLQLLSKRISRYNDPI--------SQFRVLSYLKPSN--WSKG--CGWNQIDD 1391

Query: 915  SALLLGVWKYGYGSWEAIKMDPTLGLADKI----FIKDKTKKPQGKNLQVRVDYLLKL 754
            + LLLG+  +G+G+WE I++D +LGL  KI        +T  P+  NL+ R   LL++
Sbjct: 1392 ARLLLGILYHGFGNWEKIRLDESLGLTKKIAPVELQHHETFLPRAPNLKERATALLEM 1449


>gi|50256686|gb|EAL19409.1| hypothetical protein CNBH1020
            [Cryptococcus neoformans var. neoformans B-3501A]
          Length = 1514

 Score =  674 bits (1739), Expect = 0.0
 Identities = 449/1218 (36%), Positives = 634/1218 (51%), Gaps = 70/1218 (5%)
 Frame = -1

Query: 3732 KGDPNDQIPGDKTEQQFFVKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKKQKEVEM 3553
            K DP D IP  +   +F +KW  +SH+HNT   E    L N KG KKV+NY+ K   ++
Sbjct: 268  KDDPKD-IP--QVNLRFHIKWKDYSHIHNT--DETYAFLKNYKGFKKVENYITKVWTIDQ 322

Query: 3552 ----------WKRSADKEYIEFFECEQQMAEELCEEYKKVERVVAHQTSRDRAADGSMAT 3403
                      WK +  +E +E +E +++  +EL E YK VERV+  +  + +      AT
Sbjct: 323  RYHHPEPDAAWKPT--QEEMEQYEIDKERIKELQESYKIVERVLDEKEEKRKE---GRAT 377

Query: 3402 EYLIKWSGLPYSDCTWEDEKMV-----APEQIKAYYHRIENLKSPNKN-SNVLRKRPKFE 3241
             + +KW+ L YSDCTWE  + V     A E I+ ++ R      P ++ S  +  RP ++
Sbjct: 378  LFFVKWTNLQYSDCTWETYEDVMECQGAKEGIEEFHQRQARTTIPARSISYGIDNRPTYQ 437

Query: 3240 KFESMPDFLKTDGESTHKLRDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLAS 3061
            K    P +L   G     L+ +QL GLNW+ Y W KG + ILADEMGLGKT+QS+S L+
Sbjct: 438  KIPENPPYLACGG----ALKPFQLTGLNWLAYVWSKGENGILADEMGLGKTVQSVSFLSY 493

Query: 3060 LFHRYDLAGPYLVVVPLSTMAAWQKEFAQWAPEMNLVVYMGDVVSRDMIRQYEWFVGGTK 2881
            LFH     GP+LVVVPLST++AWQ +F +WAPE+N++ YMG   SRD+IRQ+E+  G  K
Sbjct: 494  LFHVQHQYGPFLVVVPLSTISAWQAQFKRWAPELNVICYMGSARSRDVIRQFEF--GPLK 551

Query: 2880 KMKINAILTTYEILLKDKAFLSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLIT 2701
             +K N +LTTYE +LKD+  L  I W  L VDEAHRLKN ES LY++L  F    KLLIT
Sbjct: 552  NLKFNVLLTTYEFILKDRQDLQQIKWQVLAVDEAHRLKNHESQLYEALKSFWSASKLLIT 611

Query: 2700 GTPLQNSLKELWALLHFIMPEKFDCWEEFE-TAHNESNHKGISALHKKLEPFLLRRVKKD 2524
            GTPLQN++KEL AL+HF+MPEKF    +F+    +E     I  LH KL   +LRR+KKD
Sbjct: 612  GTPLQNNVKELLALMHFLMPEKFQLANDFDLNDASEDQGAKIKDLHDKLTTLMLRRLKKD 671

Query: 2523 VEKSLPPKTEQILRVDMTAHQKQFYKWILTKNYRELSKGVKGSINGFVNLVMELKKCCNH 2344
            V K LP K+E+ILRV+M+A Q  +YK ILTKN+  LSKG    ++  +N+ MELKK  NH
Sbjct: 672  VVKELPTKSERILRVEMSAMQTHYYKNILTKNFAVLSKGGTQQVS-LMNVAMELKKASNH 730

Query: 2343 ASLTRQYDHIYDDAQGXXXXXXXXXXXXXXXXXXXXXXXXXGHRVLIFSQMVMMLDILQE 2164
              L    +     A                           GHRVLIFSQMV +LDI+ +
Sbjct: 731  PYLFEGAEDRSKPANEILRGLVMNSGKMVCLDMLLSRLKSDGHRVLIFSQMVRLLDIISD 790

Query: 2163 YLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIF 1984
            Y+  R +  QRLDG++ +D+RK++++H+NAPGS DFAFLLSTRAGGLGINL TADTVIIF
Sbjct: 791  YMTARGYVHQRLDGTVPSDVRKKSIEHFNAPGSPDFAFLLSTRAGGLGINLETADTVIIF 850

Query: 1983 DSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRMDT 1804
            DSD+NPQNDLQAM+RAHRIGQ + V+I+RLV+KG++EE+I+ERA RK++L++ +I +MDT
Sbjct: 851  DSDYNPQNDLQAMARAHRIGQQRHVSIFRLVSKGTIEEDILERAMRKMLLEYAIINKMDT 910

Query: 1803 TGKTVLSKNATASGSVPFDKQELSAILKFGA--VXXXXXXXXXXXXXEVDIDRILMGAET 1630
            TG  +   +     +V   K+ELSAILKFGA  +             E+++D IL  A+
Sbjct: 911  TGAHINGSSTPKDKNVDLSKEELSAILKFGARNMFKTDDSTQNKKLDEMNLDDILNNADA 970

Query: 1629 REAEEEVMKENELLSSFKY-ANFAIDEEKDIAAATDEWAAIIPEEDRNRILEEERMKELA 1453
             + E         L    + + FA  ++         W  IIPE++R +  EEE     A
Sbjct: 971  FDTESAAAPGTTSLGGEGFLSQFAAIQDVKADVDNLSWDEIIPEDERGKAEEEENAAATA 1030

Query: 1452 EMNLAPRQR----KQPIPQVVXXXXXXXXXXXXXXXXXXXXKAVGNFTIPEIKR------ 1303
            E+  A  ++    K P                         KA G       +R
Sbjct: 1031 EIVAASSRKRAAAKAPGTYQDMDLDDHDGSSKPGSPNDKKPKAPGQLKKTPAQRALELKD 1090

Query: 1302 -----FIKSFRKFSMPLNRLEEIAQDAELEEHSTDEMKKLVESL------SEACKKAADE 1156
                  I+  +K+    +R E I ++A+LE  +   + +  E +      + A  KA
Sbjct: 1091 RDLRVLIRGIQKWGDIRSRYEPIVKEAKLENKNRVVIIQTCEDIITHGEQTIAAHKA--H 1148

Query: 1155 FDSNEKNGDAGAAESEKKDIERKFKFHTCDVNLKQIERSHAELKPLHEILKSEETKTSFK 976
                ++ G+  ++   +K I   +K     +N + +   + ELK L E  K  E   S+
Sbjct: 1149 IRDLQERGEPISSSLRQKAILFTYK-GVASINAETVVARYYELKALVEHFKRVEDFPSYT 1207

Query: 975  PPANA-KLQKGWDVDWSRPDDSALLLGVWKYGYGSWEAIKMDPTLGLADKIFIKD----- 814
             P ++ K    W V+W+  +DS LL+G+WK+G+GSWEAI  DP L L DKIF++D
Sbjct: 1208 IPHDSLKPTMNWTVEWTAREDSQLLVGIWKHGFGSWEAIAHDPELHLNDKIFLEDPKAAK 1267

Query: 813  ------KTKKPQGKNLQVRVDYLLKLMSXXXXXXXXXXXXXXXXXXVP------------ 688
                  K   P   +LQ R DYL  ++                   +P
Sbjct: 1268 LDPNAPKPGVPGPVHLQRRGDYLCGIIREYEENRRILVEQQAMIASLPAKEGFGFEHPPL 1327

Query: 687  ---VGPEKKKRHTNNVPQEGXXXXXXXXXXKNSSSLKDQLALLSIDKSLYGGALEDSSAK 517
                GP KK       P                   K      S D+S Y    ED+
Sbjct: 1328 PSIAGPSKK-------PSPSIASSSKDRDSGKGKRRKTPEYTDSEDESSYESMDEDA--- 1377

Query: 516  PFLECVKLCMPVHKYMKKLKEAQEAKNQADEAKYLTRLGDSFLENLETLIKKKPK--TNI 343
                  +L  P  K++KKLK   E  ++ ++   L          ++ ++ +K     N
Sbjct: 1378 ----VKELLRPAKKHLKKLKSGTENLSREEKIVALKECLAGIGARIDEVVAEKAAEGQNA 1433

Query: 342  RKWYNYLWIFLCKFTLRE 289
             KW  + W+F   F  R+
Sbjct: 1434 TKWRKHCWVFASFFWPRQ 1451


>gi|25411492|pir||C84507 hypothetical protein At2g13370 [imported] -
            Arabidopsis thaliana
 gi|4733988|gb|AAD28668.1| putative chromodomain-helicase-DNA-binding
            protein [Arabidopsis thaliana]
          Length = 1738

 Score =  673 bits (1736), Expect = 0.0
 Identities = 425/1029 (41%), Positives = 580/1029 (56%), Gaps = 46/1029 (4%)
 Frame = -1

Query: 3702 DKTEQQFFVKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRSADKEYI 3523
            D  E +F +KW G SHLH  W++ + L   N  G KKV NY KK  E   ++ +  +E I
Sbjct: 458  DWNEMEFLIKWKGQSHLHCQWKTLSDL--QNLSGFKKVLNYTKKVTEEIRYRTALSREEI 515

Query: 3522 EFFECEQQMAEELCEEYKKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWEDEK 3343
            E  +  ++M  ++ ++  +VER++A + S+D   D  +  EYL+KW GL Y++ TWE +
Sbjct: 516  EVNDVSKEMDLDIIKQNSQVERIIADRISKDGLGD--VVPEYLVKWQGLSYAEATWEKDV 573

Query: 3342 MVAPEQIKAYYHRIENLKSPNKNSNVLRKRPK------FEKFE-----SMPDFLKTDGES 3196
             +A  Q+    ++   +    +   V ++R K      F   E     S+    K D +
Sbjct: 574  DIAFAQVAIDEYKAREVSIAVQGKMVEQQRTKGKGENSFSNAELWLLFSVASLRKLDEQP 633

Query: 3195 TH----KLRDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPY 3028
                   LRDYQLEGLN++V +W    + ILADEMGLGKT+QS+S+L  L +   + GP+
Sbjct: 634  EWLIGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPF 693

Query: 3027 LVVVPLSTMAAWQKEFAQWAPEMNLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILTTY 2848
            LVVVPLST+A W KEF +W P MN++VY+G   SR++  +        + +K NA+LTTY
Sbjct: 694  LVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVRNKTNDVHKVGRPIKFNALLTTY 753

Query: 2847 EILLKDKAFLSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKEL 2668
            E++LKDKA LS I W  L+VDEAHRLKN E+ LY +L +F   +KLLITGTPLQNS++EL
Sbjct: 754  EVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQNSVEEL 813

Query: 2667 WALLHFIMPEKFDCWEEF-ETAHNES--NHKGISALHKKLEPFLLRRVKKDVEKSLPPKT 2497
            WALLHF+ P KF   +EF E   N S  N   ++ LH +L P +LRRV KDVEKSLPPK
Sbjct: 814  WALLHFLDPGKFKNKDEFVENYKNLSSFNESELANLHLELRPHILRRVIKDVEKSLPPKI 873

Query: 2496 EQILRVDMTAHQKQFYKWILTKNYRELSKGVKGSINGFVNLVMELKKCCNHASLTRQYDH 2317
            E+ILRV+M+  QKQ+YKWIL +N+ +L+KGV+G+    +N+V+ELKKCCNH  L    DH
Sbjct: 874  ERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADH 933

Query: 2316 IYD---DAQGXXXXXXXXXXXXXXXXXXXXXXXXXGHRVLIFSQMVMMLDILQEYLQLRR 2146
             Y    +                             HRVLIFSQMV MLDIL EYL LR
Sbjct: 934  GYGGDINDNSKLDKIILSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLRG 993

Query: 2145 FPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNP 1966
            F  QRLDGS +A+LR+QA+DH+NAP S DF FLLSTRAGGLGINLATADTV+IFDSDWNP
Sbjct: 994  FQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNP 1053

Query: 1965 QNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTVL 1786
            QNDLQAMSRAHRIGQ + VNIYR VT  SVEEEI+ERAKRK+VLDHLVIQ+++  G+  L
Sbjct: 1054 QNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLNAEGR--L 1111

Query: 1785 SKNATASGSVPFDKQELSAILKFGA----VXXXXXXXXXXXXXEVDIDRILMGAETREAE 1618
             K  T  GS  FDK ELSAIL+FGA                   +DID IL  AE  E +
Sbjct: 1112 EKRETKKGS-NFDKNELSAILRFGAEELFKEDKNDEESKKRLLSMDIDEILERAEQVEEK 1170

Query: 1617 EEVMKENELLSSFKYANFAIDEE---------KDIAAATDEWAAIIPEEDRNR------I 1483
                 E+ELL +FK ANF   E+         K  +  T E  A+ P   RN
Sbjct: 1171 HTDETEHELLGAFKVANFCNAEDDGSFWSRWIKPDSVVTAE-EALAPRAARNTKSYVDPS 1229

Query: 1482 LEEERMKELAEMNLAPRQRKQPIPQVVXXXXXXXXXXXXXXXXXXXXKAVGNFTIPEIKR 1303
              +   K   + +  P   ++   +                       + GN    + +R
Sbjct: 1230 HPDRTSKRKKKGSEPPEHTERSQKRRKTEYFVPSTPLLEGTSAQVRGWSYGNLPKRDAQR 1289

Query: 1302 FIKSFRKFSMPLNRLEEIAQD--AELEEHSTDEMKKLVESLSEACKKAADEFDSNEKNGD 1129
            F ++  KF    N++  IA++    +E    +   +L ++L + CK++ +  +   K
Sbjct: 1290 FYRTVMKFGNH-NQMACIAEEVGGVVEAAPEEAQVELFDALIDGCKESVETGNFEPKGPV 1348

Query: 1128 AGAAESEKKDIERKFKFHTCDVNLKQIERSHAELKPLHEILKSEETKTSFKPPANAKLQK 949
                    K  E   +     +  K+I R +  +        S+    S+  P+N    K
Sbjct: 1349 LDFFGVPVKANELLKRVQGLQLLSKRISRYNDPI--------SQFRVLSYLKPSN--WSK 1398

Query: 948  GWDVDWSRPDDSALLLGVWKYGYGSWEAIKMDPTLGLADKI----FIKDKTKKPQGKNLQ 781
            G    W++ DD+ LLLG+  +G+G+WE I++D +LGL  KI        +T  P+  NL+
Sbjct: 1399 G--CGWNQIDDARLLLGILYHGFGNWEKIRLDESLGLTKKIAPVELQHHETFLPRAPNLK 1456

Query: 780  VRVDYLLKL 754
             R   LL++
Sbjct: 1457 ERATALLEM 1465


>gi|45201219|ref|NP_986789.1| AGR123Cp [Eremothecium gossypii]
 gi|44986073|gb|AAS54613.1| AGR123Cp [Eremothecium gossypii]
          Length = 1422

 Score =  650 bits (1676), Expect = 0.0
 Identities = 406/1072 (37%), Positives = 582/1072 (53%), Gaps = 85/1072 (7%)
 Frame = -1

Query: 3711 IPGDKTEQQFFVKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRS--- 3541
            +P  K   +F +KW   SH+HNTWE+  SL   N +G+KKV NY+K+   ++   R+
Sbjct: 184  VPECKECYEFLIKWNNESHIHNTWETAESLG--NVRGVKKVDNYIKQYILLDHELRTDKY 241

Query: 3540 ADKEYIEFFECEQQMAEELCEEYKKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDC 3361
              +E IE  + E +   +  EE+KKVER++   + R    DGS   +YL+KW  L Y +
Sbjct: 242  TTREDIEVMDLEHERRCDEFEEFKKVERII--DSDRVTLDDGSSQLQYLVKWKRLNYDEA 299

Query: 3360 TWEDEKMV---APEQIKAYYHRIENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTH 3190
            TWE+  ++   APE++K +  R  +   P  +SN   +RP FEK    P F+K  GE
Sbjct: 300  TWENASVIVKMAPEEVKRFQSRSSSKILPQHSSNYGSQRPGFEKLSVQPSFIK-GGE--- 355

Query: 3189 KLRDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPL 3010
             LRD+QL G+NWM + W K ++ ILADEMGLGKT+Q++S ++ L       GP+LVVVPL
Sbjct: 356  -LRDFQLTGINWMAFLWSKSDNGILADEMGLGKTVQTVSFISWLIFARRQNGPHLVVVPL 414

Query: 3009 STMAAWQKEFAQWAPEMNLVVYMGDVVSRDMIRQYEWFVG----GTKKMKINAILTTYEI 2842
            STM AWQ+ F +WAPE+N V YMG+  SRD+IR+YE++      G K +K N +LTTYE
Sbjct: 415  STMPAWQETFEKWAPELNCVYYMGNQKSRDVIREYEFYTNPHTKGKKNIKFNVLLTTYEY 474

Query: 2841 LLKDKAFLSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWA 2662
            +LKD+  L +I W  L VDEAHRLKN ES LY+SL+ F+  +++LITGTPLQN++KEL A
Sbjct: 475  ILKDRLELGAIKWQFLAVDEAHRLKNAESSLYESLSSFKVANRMLITGTPLQNNIKELAA 534

Query: 2661 LLHFIMPEKFDCWEEFETAH-NESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQIL 2485
            L++F+MP KF   +E +  + +E     I  LHK+L+P++LRR+KKDVEKSLP KTE+IL
Sbjct: 535  LVNFLMPGKFTIDQEIDFENQDEKQENYIRDLHKRLQPYILRRLKKDVEKSLPSKTERIL 594

Query: 2484 RVDMTAHQKQFYKWILTKNYRELSKGVKGSINGFVNLVMELKKCCNHASL--------TR 2329
            RV+++  Q ++YK ILTKNY  L+ G KG+    +N++ ELKK  NH  L
Sbjct: 595  RVELSDVQTEYYKNILTKNYNALTAGTKGTHFSLLNIMNELKKASNHPYLFGNAENRVLA 654

Query: 2328 QYDHIYDDAQGXXXXXXXXXXXXXXXXXXXXXXXXXGHRVLIFSQMVMMLDILQEYLQLR 2149
            ++       +                          GHRVLIFSQMV MLDIL +YL ++
Sbjct: 655  KFGDGNRSRENILRGLIMSSGKMVLLDKLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIK 714

Query: 2148 RFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWN 1969
                QRLDG++ +  R+ ++DH+NAP S DF FLLSTRAGGLGINL TADTVIIFDSDWN
Sbjct: 715  GINFQRLDGTVPSSQRRISIDHFNAPDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWN 774

Query: 1968 PQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTV 1789
            PQ DLQAM+RAHRIGQ   V +YR V+K +VEEE++ERA++K++L++ +I    T G
Sbjct: 775  PQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKY 834

Query: 1788 LSKNATASGSVPFDKQELSAILKFGAVXXXXXXXXXXXXXEVDIDRILMGAE----TREA 1621
             SK+     +      ELS ILKFGA              ++++D +L  AE    T +
Sbjct: 835  TSKSKAEPSA-----GELSEILKFGAGNMFKAHDNQKKLEDLNLDDVLNHAEDHVTTPDL 889

Query: 1620 EEEVMKENELLSSFKYANFAIDEEKDIAAATDEWAAIIPEEDRNRILE--EERMKELAEM 1447
             E  +   E L  F+  ++  D E D     DE   +  EE + +  E  +E+++ +
Sbjct: 890  GESHLGGEEFLKQFEVTDYKADVEWDDIIPEDELRKLKDEEQKRKDEEYVQEQLQMMNRR 949

Query: 1446 NLAPRQRKQPIPQVVXXXXXXXXXXXXXXXXXXXXKAVGNFTIPEIKRFIKSFRKFSMPL 1267
            N+A  + K  +                          + +    EI+   K+  K+
Sbjct: 950  NVALNKIKNSVNG--DGAQSLSDKEDSRSKKRAKSNNLNSIGEREIRALYKAILKYGDLT 1007

Query: 1266 NRLEEIAQDAELEEHSTDEMKKLVESLSEACKKA------------------ADEFDSNE 1141
             RL ++  D  L   S ++  +L + L    +K                    +E+ +
Sbjct: 1008 ERLGDLIADGTLPVKSLEKYGELYDELMSIARKQINDEESKRNEAISRLERDVEEYKTKV 1067

Query: 1140 KNGD--------------AGAAESEKKDIERKFKFHTCDVNLKQIERSHAELKPLHEILK 1003
            K+G+                A   EK+ +  +F +    +N + I     +L+ LH  LK
Sbjct: 1068 KSGEIKPDDNAKDLPIARLAAKRREKRAVLFEF-YEIKGLNAETIVNRTDDLRFLHNFLK 1126

Query: 1002 SEETKTSFKPPANAKLQK---GWDVDWSRPDDSALLLGVWKYGYGSWEAIKMDPTLGLAD 832
            +       K     +L K    W+  W++ DD  LL+GV KYGYGSW  ++ DP LGL+D
Sbjct: 1127 NNYPSDPMKFRFLNRLPKPITNWNCTWTQEDDEKLLVGVDKYGYGSWSQVRDDPFLGLSD 1186

Query: 831  KIFIKD------------------KT-------KKPQGKNLQVRVDYLLKLM 751
            KIF+ +                  KT       K P   +L  RVDYLL ++
Sbjct: 1187 KIFLNEPGTQTNDSAAADADAADKKTRLANAAKKVPGSVHLGRRVDYLLTVL 1238


>gi|19114572|ref|NP_593660.1| putative helicase [Schizosaccharomyces
            pombe]
 gi|15214054|sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1
 gi|11267544|pir||T50107 probable helicase [imported] - fission yeast
            (Schizosaccharomyces pombe)
 gi|6714825|emb|CAB66168.1| SPAC1783.05 [Schizosaccharomyces pombe]
          Length = 1373

 Score =  649 bits (1673), Expect = 0.0
 Identities = 408/1033 (39%), Positives = 575/1033 (55%), Gaps = 35/1033 (3%)
 Frame = -1

Query: 3744 NIADKGDPNDQIPGDKTEQQFFVKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKKQK 3565
            N   + D  D  P  K+  Q+ +KW   SHLHNTWE  ++L+  + +G KKV NY+K+
Sbjct: 214  NHRKRADAQDDDP--KSSYQYLIKWQEVSHLHNTWEDYSTLS--SVRGYKKVDNYIKQNI 269

Query: 3564 EVEMWKR---SADKEYIEFFECEQQMAEELCEEYKKVERVVAHQTSRDRAADGSMATEYL 3394
              +   R   +   E IE  + E++    L EEYK VER+VA +T+ +        TEY
Sbjct: 270  IYDREIREDPTTTFEDIEALDIERERKNMLFEEYKIVERIVASETNEEGK------TEYF 323

Query: 3393 IKWSGLPYSDCTWEDEKMV---APEQIKAYYHRIENLKSPNKNSNVLRKRPKFEKFESMP 3223
            +KW  LPY +CTWED  ++   AP ++  +  R  +   P K       RP + K E  P
Sbjct: 324  VKWRQLPYDNCTWEDADVIYSMAPNEVYQFLQRENSPYLPYKGV-FYNTRPPYRKLEKQP 382

Query: 3222 DFLKTDGESTHKLRDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYD 3043
             ++K  GE    +RD+QL G+NWM Y W +  + ILADEMGLGKT+Q++  L+ L H
Sbjct: 383  SYIK-GGE----IRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSLK 437

Query: 3042 LAGPYLVVVPLSTMAAWQKEFAQWAPEMNLVVYMGDVVSRDMIRQYEWFVG-GTKKMKIN 2866
              GP+L+VVPLST+ AWQ+  A W P++N + Y G+  SR  IR+YE+++   ++K+K N
Sbjct: 438  QHGPFLIVVPLSTVPAWQETLANWTPDLNSICYTGNTESRANIREYEFYLSTNSRKLKFN 497

Query: 2865 AILTTYEILLKDKAFLSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQ 2686
             +LTTYE +LKDK  L++I W  L +DEAHRLKN ES LY++L+QFR  ++LLITGTPLQ
Sbjct: 498  ILLTTYEYILKDKQELNNIRWQYLAIDEAHRLKNSESSLYETLSQFRTANRLLITGTPLQ 557

Query: 2685 NSLKELWALLHFIMPEKFDCWEEFE-TAHNESNHKGISALHKKLEPFLLRRVKKDVEKSL 2509
            N+LKEL +L++F+MP KF   +E      N    + I  L ++L+PF+LRR+KKDVEKSL
Sbjct: 558  NNLKELASLVNFLMPGKFYIRDELNFDQPNAEQERDIRDLQERLQPFILRRLKKDVEKSL 617

Query: 2508 PPKTEQILRVDMTAHQKQFYKWILTKNYRELSKGVKGSIN-GFVNLVMELKKCCNH---- 2344
            P K+E+ILRV+++  Q ++YK ILTKNYR L+    G      +N+V+ELKK  NH
Sbjct: 618  PSKSERILRVELSDMQTEWYKNILTKNYRALTGHTDGRGQLSLLNIVVELKKVSNHPYLF 677

Query: 2343 ----------ASLTRQYDHIYDDAQGXXXXXXXXXXXXXXXXXXXXXXXXXGHRVLIFSQ 2194
                        +TR+     D  +G                         GHRVLIFSQ
Sbjct: 678  PGAAEKWMMGRKMTRE-----DTLRG----IIMNSGKMVLLDKLLQRLKHDGHRVLIFSQ 728

Query: 2193 MVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGIN 2014
            MV ML+IL EY+ LR +  QRLDG++ A +R+ ++DH+NAP S DF FLLSTRAGGLGIN
Sbjct: 729  MVRMLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAPDSPDFVFLLSTRAGGLGIN 788

Query: 2013 LATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVL 1834
            L TADTVIIFDSDWNPQ DLQAM+RAHRIGQ   VN+YR ++K +VEE+I+ERA+RK++L
Sbjct: 789  LNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVEEDILERARRKMIL 848

Query: 1833 DHLVIQRMDTTGKTVLSKNATASGSVPFDKQELSAILKFGAVXXXXXXXXXXXXXEVDID 1654
            ++ +I    + G T  SKN   S +  +D QELSAILKFGA               +++D
Sbjct: 849  EYAII----SLGVTEKSKN---SKNDKYDAQELSAILKFGASNMFKATENQKKLENMNLD 901

Query: 1653 RILMGAETREAEEEV----MKENELLSSFKYANFAIDEEKDIAAATDEWAAIIPEEDRNR 1486
             IL  AE R++  +V    M   E L  F        E  D  A    W  IIPEE+  R
Sbjct: 902  DILSHAEDRDSSNDVGGASMGGEEFLKQF--------EVTDYKAEDLNWDDIIPEEEMER 953

Query: 1485 ILEEERMKELAEMNLAPRQRKQPIPQVVXXXXXXXXXXXXXXXXXXXXKAVGNFT-IPEI 1309
            I EEERM          R+R++   +                      +         EI
Sbjct: 954  IEEEERMLAAQRAKEEERERREEEERENDEDHPSRTYKRTTKSITKRQQRREEMVREKEI 1013

Query: 1308 KRFIKSFRKFSMPLNRLEEIAQDAELEEHSTDEMKKLVESLSEACKKAADEFDSNEKNGD 1129
            +   ++  KF +   R + I ++AEL+      +  L   + +AC +A +   +++
Sbjct: 1014 RLLYRAMIKFGLVDERFDTIVKEAELQATDPKRIYSLSADMVKACDEAVERLGADDTKN- 1072

Query: 1128 AGAAESEKKDIERKFKFHTCDVNLKQIERSHAELKPLHEILKS-EETKTSFKPPANAKLQ 952
                +  +K I  +FK    ++N + +     +L  LH   K  +  K     P  +
Sbjct: 1073 ----KQPRKAILIEFK-GVKNINAETVTLRVKDLTHLHRAYKGLDPLKQIIGYPIRS--V 1125

Query: 951  KGWDVDWSRPDDSALLLGVWKYGYGSWEAIKMDPTLGLADKIFI------KDKTKKPQGK 790
              W+  W   +DS LL G+ K+G+G W+AIK DP LGL DKIF+      K+    P
Sbjct: 1126 HSWNCSWGIKEDSMLLAGINKHGFGCWQAIKNDPDLGLHDKIFLDEAKNDKESRYVPSAV 1185

Query: 789  NLQVRVDYLLKLM 751
            +L  R +YLL ++
Sbjct: 1186 HLVRRGEYLLSVV 1198


>gi|50306047|ref|XP_452985.1| unnamed protein product [Kluyveromyces
            lactis]
 gi|49642118|emb|CAH01836.1| unnamed protein product [Kluyveromyces
            lactis NRRL Y-1140]
          Length = 1525

 Score =  647 bits (1668), Expect = 0.0
 Identities = 402/1025 (39%), Positives = 567/1025 (55%), Gaps = 66/1025 (6%)
 Frame = -1

Query: 3687 QFFVKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRS---ADKEYIEF 3517
            +F +KW   SHLHN+WES   L     KGLK+++NY K+   ++   R+     +E IE
Sbjct: 219  EFLIKWADQSHLHNSWESYEDLKENGTKGLKRIENYYKQFIILDQEVRADPYTTREDIEV 278

Query: 3516 FECEQQMAEELCEEYKKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWEDEKMV 3337
             + E +   +  EE+K  ER++  +   +    GS   +YL+KW  L Y +CTWE    +
Sbjct: 279  MDLEHERRIDEFEEFKVPERIIDSERFENEDGSGSSQLKYLVKWRRLNYDECTWEVASEI 338

Query: 3336 ---APEQIKAYYHRIENLKSPNKNSNV-LRKRPKFEKFESMPDFLKTDGESTHKLRDYQL 3169
               APEQ+K + +R  +   P  +SN    +RPKFEK ++ P F+K  GE    LRD+QL
Sbjct: 339  VKMAPEQVKEFQNRTNSKIMPQNSSNYPANQRPKFEKLDAQPSFIK-GGE----LRDFQL 393

Query: 3168 EGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQ 2989
             G+NWM + W K ++ ILADEMGLGKT+Q++S ++ L +     GP+LVVVPLSTM AWQ
Sbjct: 394  TGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAWQ 453

Query: 2988 KEFAQWAPEMNLVVYMGDVVSRDMIRQYEWFVG----GTKKMKINAILTTYEILLKDKAF 2821
            + F +WAP +N V YMG+  SRD+I+ YE++      G K +K N +LTTYE +LKD++
Sbjct: 454  ETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYEYILKDRST 513

Query: 2820 LSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMP 2641
            L SI W  L VDEAHRLKN ES LY+SL  F+  ++LLITGTPLQN++KEL AL++F+MP
Sbjct: 514  LGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMP 573

Query: 2640 EKFDCWEEFETAH-NESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAH 2464
             +F   +E +  + +E   + I  LHK+L+PF+LRR+KKDVEKSLP KTE+ILRV+++
Sbjct: 574  GRFTIDQEIDFENQDEQQEEYIRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDV 633

Query: 2463 QKQFYKWILTKNYRELSKGVKGSINGFVNLVMELKKCCNHASL--------TRQYDHIYD 2308
            Q ++YK ILTKNY  L+ G+KG     +N++ ELKK  NH  L          ++   +
Sbjct: 634  QTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELKKASNHPYLFDNAEERVLSKFGDGHK 693

Query: 2307 DAQGXXXXXXXXXXXXXXXXXXXXXXXXXGHRVLIFSQMVMMLDILQEYLQLRRFPSQRL 2128
              +                          GHRVLIFSQMV +LDIL +YL ++    QRL
Sbjct: 694  SRENILRGLIMSSGKMVLLDKLLTRLKKDGHRVLIFSQMVRILDILGDYLSIKGINFQRL 753

Query: 2127 DGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQA 1948
            DG++ +  R+ ++DH+NA  S DF FLLSTRAGGLGINL TADTVIIFDSDWNPQ DLQA
Sbjct: 754  DGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQA 813

Query: 1947 MSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTVLS--KNA 1774
            M+RAHRIGQ   V +YR V+K +VEEE++ERA++K++L++ +I    T G  + S  KN
Sbjct: 814  MARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKISSTKKNE 873

Query: 1773 TASGSVPFDKQELSAILKFGAVXXXXXXXXXXXXXEVDIDRILMGAE----TREAEEEVM 1606
             ++G       ELS ILKFGA              ++++D +L  AE    T E  E  +
Sbjct: 874  PSAG-------ELSEILKFGAGNMFKPNDNQQKLEDLNLDEVLNHAEDHITTPELGESNL 926

Query: 1605 KENELLSSFKYANFAIDEEKDIAAATDEWAAIIPEEDRNRILEEERMKELAEMNLAPRQR 1426
               E L  F+  ++  D + D     DE   +  EE R   ++EE ++E  ++
Sbjct: 927  GGEEFLRQFEVTDYKADVDWDDIIPEDELKKLKDEEQRR--IDEEYVREQLDIMNRKTAA 984

Query: 1425 KQPIPQVVXXXXXXXXXXXXXXXXXXXXKAVGN---FTIPEIKRFIKSFRKFSMPLNRLE 1255
               I + V                        N   F   EI+   K   +F    N+ E
Sbjct: 985  IDKIKRSVNGETFGSDSEDEGNSKSRKRSKANNLDAFGEREIRALYKCILRFGDIENKFE 1044

Query: 1254 EIAQDAELEEHSTDEMKKLV-ESLSEA-----------------CKKAADEFDSNEKN-- 1135
            E+  D  L   S D  K+L  E ++EA                  +K A E+    KN
Sbjct: 1045 ELIADGSLPVKSIDRYKELYHEMITEAETLMRDEEAKRHEIFSKLEKDAAEYRQKIKNLE 1104

Query: 1134 ----GDAG---------AAESEKKDIERKFKFH-TCDVNLKQIERSHAELKPLHEILKS- 1000
                 DAG         A   EK+ I   F+FH T  +N   +      LK L   ++
Sbjct: 1105 IKPEDDAGKETPITLLSAKRREKRAI--LFEFHDTKALNADTLVNRRDNLKFLSNFVERN 1162

Query: 999  -EETKTSFK-PPANAKLQKGWDVDWSRPDDSALLLGVWKYGYGSWEAIKMDPTLGLADKI 826
             ++    FK    N K    W+  W + DD  LL+G++KYGYG+W  I+ DP LGL +K+
Sbjct: 1163 YKDDPLQFKFVNKNPKPVSAWNCVWGKEDDEKLLIGIYKYGYGAWMQIRDDPFLGLTEKL 1222

Query: 825  FIKDK 811
            F+ ++
Sbjct: 1223 FLNNE 1227


>gi|50293735|ref|XP_449279.1| unnamed protein product [Candida
            glabrata]
 gi|49528592|emb|CAG62253.1| unnamed protein product [Candida glabrata
            CBS138]
          Length = 1476

 Score =  644 bits (1660), Expect = 0.0
 Identities = 395/1022 (38%), Positives = 566/1022 (54%), Gaps = 60/1022 (5%)
 Frame = -1

Query: 3699 KTEQQFFVKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKK---QKEVEMWKRSADKE 3529
            K   +F +KWT  SHLHNTWE+  SLA    KG+K++ NY K+   Q++          E
Sbjct: 223  KENYEFQIKWTDQSHLHNTWETYESLA--GVKGIKRLDNYCKQYIIQEQQVRLDPYITPE 280

Query: 3528 YIEFFECEQQMAEELCEEYKKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWED 3349
             IE  + E +   +  +E+   ER++  Q  R    DG+   +YL+KW  L Y + TWED
Sbjct: 281  DIEIMDMEHERRLDELQEFTNPERIIDSQ--RVELEDGTSQLQYLVKWRHLNYDEATWED 338

Query: 3348 EK---MVAPEQIKAYYHRIENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRD 3178
                  +APE +K +  R  +   P  +SN   +RP+FEK    P F+K  GE    LRD
Sbjct: 339  AAEIVKIAPEPVKHFQSRQNSKILPQYSSNYTSERPRFEKLSVQPPFIK-GGE----LRD 393

Query: 3177 YQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMA 2998
            +QL G+NWM + W K ++ ILADEMGLGKT+Q+++ ++ L       GP+LVVVPLSTM
Sbjct: 394  FQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHLVVVPLSTMP 453

Query: 2997 AWQKEFAQWAPEMNLVVYMGDVVSRDMIRQYEWFVG----GTKKMKINAILTTYEILLKD 2830
            AW + F +WAP+++++ YMG+  SRD+ R+YE++      G K++K N ++TTYE +LKD
Sbjct: 454  AWIETFEKWAPDIDVICYMGNQKSRDIEREYEFYSNPKGKGKKQIKFNVLMTTYEYILKD 513

Query: 2829 KAFLSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHF 2650
            +A L SI W  L VDEAHRLKN ES LY+SL  F+  ++LLITGTPLQN++KEL AL++F
Sbjct: 514  RAELGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNF 573

Query: 2649 IMPEKFDCWEEFETAH-NESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDM 2473
            +MP +F   +E +  + +E   + I  LHK+L+PF+LRR+KKDVEKSLP KTE+ILRV++
Sbjct: 574  LMPGRFTIDQEIDFENQDEEQEQYIRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVEL 633

Query: 2472 TAHQKQFYKWILTKNYRELSKGVKGSINGFVNLVMELKKCCNHASLTRQYDHIYDDAQGX 2293
            +  Q ++YK ILTKNY  L+ G KG     +N++  L K  NH  L    +    +  G
Sbjct: 634  SDVQTEYYKNILTKNYSALTAGAKGGRFSMLNIMNTLMKASNHPYLFDSAEEKVLEKFGA 693

Query: 2292 XXXX--------XXXXXXXXXXXXXXXXXXXXGHRVLIFSQMVMMLDILQEYLQLRRFPS 2137
                                            GHRVLIFSQMV +LDIL +YL ++
Sbjct: 694  GNMSRENILRGLIMSSGKMVLLDKLLTRLKKDGHRVLIFSQMVRILDILGDYLSIKGINF 753

Query: 2136 QRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQND 1957
            QRLDG++ ++ R+ A+DH+NAPGS DF FLLSTRAGGLGINL TADTVIIFDSDWNPQ D
Sbjct: 754  QRLDGTVPSNQRRIAIDHFNAPGSDDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQAD 813

Query: 1956 LQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTVLSKN 1777
            LQAM+RAHRIGQ   V +YRLV+K +VEEE++ERA++K++L++ +I    T G     K
Sbjct: 814  LQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKYTKKT 873

Query: 1776 ATASGSVPFDKQELSAILKFGAVXXXXXXXXXXXXXEVDIDRILMGAE----TREAEEEV 1609
              ++G       ELS ILKFGA              ++++D +L  AE    T +  E
Sbjct: 874  EPSAG-------ELSEILKFGAGNMFAAKDNQKKLEDLNLDDVLSHAEDHVTTPDLGESH 926

Query: 1608 MKENELLSSFKYANFAIDEEKDIAAATDEWAAIIPEEDRNRILEEERMKELAEMNLAPRQ 1429
            +   E L  F+  ++  D + D     +E   +  EE R++  +EE +KE  EM
Sbjct: 927  LGGEEFLKQFEVTDYKADVDWDDIIPEEELKKLQDEEQRHK--DEEYVKEQLEMMNRRNN 984

Query: 1428 RKQPIPQVVXXXXXXXXXXXXXXXXXXXXKAVGNFTI---PEIKRFIKSFRKFSMPLNRL 1258
              + I   V                        +       E++   ++  +F    ++L
Sbjct: 985  ALKKIKDSVNGEGSTVTSDDEDGRSSRRRAKTNDLNSIGDSEVRALYRAVLRFGDVTDKL 1044

Query: 1257 EEIAQDAELEEHSTDEMKKLVESLSEACKK------------------AADEFDSNEKNG 1132
            +E+  D  L   S ++ K+++E L +  K                   AA E+    K G
Sbjct: 1045 DELIADGTLPVKSIEKYKEILEELLDEAKSIYEEEDTKRTQTLREFEAAAHEYKMKLKTG 1104

Query: 1131 DAGAAESEK---------KDIERK---FKFHTC-DVNLKQIERSHAELKPLHEILKS--E 997
            +  A E EK         K  E+K   F FH    +N + I     +L+ ++   K+  +
Sbjct: 1105 EIKAEEQEKDNPITRLTMKRREKKAILFTFHKVKSLNAESIVNRCRDLEFVNNYFKTHFK 1164

Query: 996  ETKTSFK-PPANAKLQKGWDVDWSRPDDSALLLGVWKYGYGSWEAIKMDPTLGLADKIFI 820
                 FK   A+ K    W+ DW++ DD  L++G+ KYGYG+W  I+ DP LGL +KIF+
Sbjct: 1165 NDPLEFKFDKAHPKPVTNWNCDWNQMDDEKLMVGIHKYGYGAWAQIRDDPFLGLTNKIFL 1224

Query: 819  KD 814
             D
Sbjct: 1225 SD 1226


>gi|11267547|pir||T43334 helicase-related protein hrp1 - fission yeast
             (Schizosaccharomyces pombe)
 gi|1597721|emb|CAA67494.1| putative helicase [Schizosaccharomyces
            pombe]
          Length = 1367

 Score =  639 bits (1647), Expect = 0.0
 Identities = 402/1022 (39%), Positives = 566/1022 (55%), Gaps = 34/1022 (3%)
 Frame = -1

Query: 3714 QIPGDKTEQQFFVKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKR--- 3544
            Q  G K+  Q+ +KW   SHLHNTWE  ++L+  + +G KKV NY+K+    +   R
Sbjct: 222  QDDGPKSSYQYLIKWQEVSHLHNTWEDYSTLS--SVRGYKKVDNYIKQNIIYDREIREDP 279

Query: 3543 SADKEYIEFFECEQQMAEELCEEYKKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSD 3364
            +   E IE  + E++    L EEYK VER+VA +T+ +        TEY +KW  LPY +
Sbjct: 280  TTTFEDIEALDIERERKNMLFEEYKIVERIVASETNEEGK------TEYFVKWRQLPYDN 333

Query: 3363 CTWEDEKMV---APEQIKAYYHRIENLKSPNKNSNVLRKRPKFEKFESMPDFLKTDGEST 3193
            CTWED  ++   AP ++  +  R  +   P K       RP + K E  P ++K  GE
Sbjct: 334  CTWEDSDVIYSMAPNEVYQFLQRENSPYLPYKGV-FYNTRPPYRKLEKQPSYMK-GGE-- 389

Query: 3192 HKLRDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVP 3013
              +RD+QL G+NWM Y W +  + ILADEMGLGKT+Q++  L+ L H     GP+L+VVP
Sbjct: 390  --IRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSLKQHGPFLIVVP 447

Query: 3012 LSTMAAWQKEFAQWAPEMNLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLK 2833
            LST+ AWQ+  A W P++N + Y G+  SR ++         ++K+K N +LTTYE +LK
Sbjct: 448  LSTVPAWQETLANWTPDLNSICYTGNTESRAILESMN-----SRKLKFNILLTTYEYILK 502

Query: 2832 DKAFLSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLH 2653
            DK  L++I W  L +DEAHRLKN ES LY++L+QFR  ++LLITGTPLQN+LKEL +L++
Sbjct: 503  DKQELNNIRWQYLAIDEAHRLKNSESSLYETLSQFRTANRLLITGTPLQNNLKELASLVN 562

Query: 2652 FIMPEKFDCWEEFE-TAHNESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVD 2476
            F+MP KF   +E      N    + I  L ++L+PF+LRR+KKDVEKSLP K+E+ILRV+
Sbjct: 563  FLMPGKFYIRDELNFDQPNAEQERDIRDLQERLQPFILRRLKKDVEKSLPSKSERILRVE 622

Query: 2475 MTAHQKQFYKWILTKNYRELSKGVKGSIN-GFVNLVMELKKCCNH--------------A 2341
            ++  Q ++YK ILTKNYR L+    G      +N+V+ELKK  NH
Sbjct: 623  LSDMQTEWYKNILTKNYRALTGHTDGRGQLSLLNIVVELKKVSNHPYLFPGAAEKWMMGR 682

Query: 2340 SLTRQYDHIYDDAQGXXXXXXXXXXXXXXXXXXXXXXXXXGHRVLIFSQMVMMLDILQEY 2161
             +TR+     D  +G                         GHRVLIFSQMV ML+IL EY
Sbjct: 683  KMTRE-----DTLRG----IIMNSGKMVLLDKLLQRLKHDGHRVLIFSQMVRMLNILGEY 733

Query: 2160 LQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFD 1981
            + LR +  QRLDG++ A +R+ ++DH+NAP S DF FLLSTRAGGLGINL TADTVIIFD
Sbjct: 734  MSLRGYNYQRLDGTIPASVRRVSIDHFNAPDSPDFVFLLSTRAGGLGINLNTADTVIIFD 793

Query: 1980 SDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRMDTT 1801
            SDWNPQ DLQAM+RAHRIGQ   VN+YR ++K +VEE+I+ERA+RK++L++ +I    +
Sbjct: 794  SDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVEEDILERARRKMILEYAII----SL 849

Query: 1800 GKTVLSKNATASGSVPFDKQELSAILKFGAVXXXXXXXXXXXXXEVDIDRILMGAETREA 1621
            G T  SKN   S +  +D QELSAILKFGA               +++D IL  AE R++
Sbjct: 850  GVTEKSKN---SKNDKYDAQELSAILKFGASNMFKATENQKKLENMNLDDILSHAEDRDS 906

Query: 1620 EEEV----MKENELLSSFKYANFAIDEEKDIAAATDEWAAIIPEEDRNRILEEERMKELA 1453
              +V    M   E L  F        E  D  A    W  IIPEE+  RI EEERM
Sbjct: 907  SNDVGGASMGGEEFLKQF--------EVTDYKAEDLNWDDIIPEEEMERIEEEERMLAAQ 958

Query: 1452 EMNLAPRQRKQPIPQVVXXXXXXXXXXXXXXXXXXXXKAVGNFT-IPEIKRFIKSFRKFS 1276
                  R+R++   +                      +         EI+   ++  KF
Sbjct: 959  RAKEEERERREEEERENDEDHPSRTYKRTTKSITKRQQRREEMVREKEIRLLYRAMIKFG 1018

Query: 1275 MPLNRLEEIAQDAELEEHSTDEMKKLVESLSEACKKAADEFDSNEKNGDAGAAESEKKDI 1096
            +   R + I ++AEL+      +  L   + +AC +A +   +++        +  +K I
Sbjct: 1019 LVDERFDTIVKEAELQATDPKRIYSLSADMVKACDEAVERLGADDTKN-----KQPRKAI 1073

Query: 1095 ERKFKFHTCDVNLKQIERSHAELKPLHEILKS-EETKTSFKPPANAKLQKGWDVDWSRPD 919
              +FK    ++N + +     +L  LH   K  +  K     P  +     W+  W   +
Sbjct: 1074 LIEFK-GVKNINAETVTLRVKDLTHLHRAYKGLDPLKQIIGYPIRS--VHSWNCSWGIKE 1130

Query: 918  DSALLLGVWKYGYGSWEAIKMDPTLGLADKIFI------KDKTKKPQGKNLQVRVDYLLK 757
            DS LL G+ K+G+G W+AIK DP LGL DKIF+      K+    P   +L  R +YLL
Sbjct: 1131 DSMLLAGINKHGFGCWQAIKNDPDLGLHDKIFLDEAKNDKESRYVPSAVHLVRRGEYLLS 1190

Query: 756  LM 751
            ++
Sbjct: 1191 VV 1192


>gi|50426953|ref|XP_462077.1| unnamed protein product [Debaryomyces
            hansenii]
 gi|49657747|emb|CAG90563.1| unnamed protein product [Debaryomyces
            hansenii CBS767]
          Length = 1405

 Score =  638 bits (1645), Expect = 0.0
 Identities = 401/1053 (38%), Positives = 587/1053 (55%), Gaps = 70/1053 (6%)
 Frame = -1

Query: 3699 KTEQQFFVKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKKQKEVEMWKRS---ADKE 3529
            K +  F VKW+  SHLHNTWES ++L   + KG +KV NY+K+   ++   R+     KE
Sbjct: 188  KLDYLFKVKWSDASHLHNTWESWSTLK--DFKGFRKVDNYIKQFIIMDREIRNDPLTTKE 245

Query: 3528 YIEFFECEQQMAEELCEEYKKVERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWED 3349
             IE  + + +   +   EY +VER+V  + +     DG    +Y  KW  L Y +C+WE+
Sbjct: 246  DIEAMDIDLERRRDEQNEYTEVERIVDSERAE---VDGESQLQYYCKWKRLYYDECSWEN 302

Query: 3348 EK---MVAPEQIKAYYHRIENLKSPNKNSNV-LRKRPKFEKFESMPDFLKTDGESTHKLR 3181
             +    +APEQ+  Y  R+++   PN ++N    +RP+FEK    P F+K +GE    LR
Sbjct: 303  AEEIARIAPEQVTRYQQRLKSKILPNLSANYPSNQRPRFEKLVKQPLFIK-NGE----LR 357

Query: 3180 DYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTM 3001
            D+QL GLNWM + W +  + ILADEMGLGKT+Q++S L+ L +     GP+LVVVPLST+
Sbjct: 358  DFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVSFLSWLIYARRQNGPHLVVVPLSTV 417

Query: 3000 AAWQKEFAQWAPEMNLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDKAF 2821
             AWQ+ F +W+P++N + Y+G+  SR  +R YE F  G  K K N +LTTYE +LKD+
Sbjct: 418  PAWQETFEKWSPDLNCIYYLGNTESRRNLRNYE-FYQGNNKPKFNILLTTYEYILKDRNE 476

Query: 2820 LSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALLHFIMP 2641
            L +I W  L VDEAHRLKN ES LY+SL  F+  ++LLITGTPLQN++KEL AL +F+MP
Sbjct: 477  LGAIKWQFLAVDEAHRLKNAESSLYESLKLFKVTNRLLITGTPLQNNIKELAALCNFLMP 536

Query: 2640 EKFDCWEEFE-TAHNESNHKGISALHKKLEPFLLRRVKKDVEKSLPPKTEQILRVDMTAH 2464
             KF+  +E +  + ++   + I  L KK++PF+LRR+KKDVEKSLP KTE+ILRV+++
Sbjct: 537  GKFNIEQEIDFESPDDQQEQYIKDLQKKIQPFILRRLKKDVEKSLPSKTERILRVELSDL 596

Query: 2463 QKQFYKWILTKNYRELSKGVKGSINGFVNLVMELKKCCNHASLTRQYDHIYDDAQGXXXX 2284
            Q  +YK I+TKNY  L+ G KGS    +N++ ELKK  NH        +++D A+
Sbjct: 597  QTDYYKNIITKNYSALNAGNKGSQISLLNVMSELKKASNH-------PYLFDGAEERALA 649

Query: 2283 XXXXXXXXXXXXXXXXXX-------------XXXGHRVLIFSQMVMMLDILQEYLQLRRF 2143
                                              GHRVLIFSQMV MLDIL +YL ++ +
Sbjct: 650  KANSNARDNVLRGIIMSSGKMVLLEQLLTRLKKEGHRVLIFSQMVRMLDILGDYLSIKGY 709

Query: 2142 PSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQ 1963
              QRLDG + +  R+ ++DH+NAP S DFAFLLSTRAGGLGINL TADTV+IFDSDWNPQ
Sbjct: 710  QFQRLDGGIPSSQRRISIDHFNAPDSKDFAFLLSTRAGGLGINLMTADTVVIFDSDWNPQ 769

Query: 1962 NDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRMDTTGKTVLS 1783
             DLQAM+RAHRIGQ   V++YR V+K +VEEEI+ERA++K++L++ +I    T   +  S
Sbjct: 770  ADLQAMARAHRIGQKNHVSVYRFVSKDTVEEEILERARKKMILEYAIISLGITDPSSTKS 829

Query: 1782 KNATASGSVPFDKQELSAILKFGAVXXXXXXXXXXXXXEVDIDRILMGAE----TREAEE 1615
            K   ++        EL+ ILKFGA              ++++D +L  AE    T +  E
Sbjct: 830  KTEPSA-------NELTQILKFGAGNMFRENDNQKKLEDLNLDEVLNHAEDHVTTPDLGE 882

Query: 1614 EVMKENELLSSFKYANFAIDEEKDIAAATDEWAAIIPEEDRNRILEEERMK---ELAEMN 1444
              +   E L  F+  ++  D          EW  IIP+E+ +++ E+E+ K   E  +
Sbjct: 883  SNLGSEEFLKQFEVTDYKAD---------IEWDDIIPQEELSKLKEDEKKKADDEFLQEQ 933

Query: 1443 LAPRQRKQPIPQVVXXXXXXXXXXXXXXXXXXXXKAVGN-----FTIPEIKRFIKSFRKF 1279
            ++   R++   + +                        N      +  EI+   +S  K
Sbjct: 934  ISMYSRRKAAVRKLQDGSENVSEDEVADSDNQRKARKRNDENYQLSEKEIRGIYRSILKL 993

Query: 1278 SMPLNRLEEIAQDAELE-------EHSTDEM----KKLVES--------LSEACKKAADE 1156
                 + E++ +D  +        +H+ +E+    K+LV+         L+E  +KA +
Sbjct: 994  GDLTGKWEQLVEDGSISNKNPVLIKHAYNEIINISKQLVKEEEARRTKVLAELERKAMEL 1053

Query: 1155 FDSNEKNGDAG-------AAESEKKDIERKFKFHTCDVNLKQIERSHAELKPLHEILKSE 997
             D N    D         A + EK+ +  +++    ++N + +     ++K L E L S+
Sbjct: 1054 KDKNVVTVDGSSPMALWVAKKKEKRAVLFEYQ-GVKNINAELVLARPQDMK-LLESLISK 1111

Query: 996  ETKTSFKPPANAKLQKGWDVDWSRPDDSALLLGVWKYGYGSWEAIKMDPTLGLADKIFI- 820
            E  TSF+ P   K    W+ +W   DDS LL+GV+K+GYGSW  I+ DP LGL +K+F+
Sbjct: 1112 ENPTSFEIPKPPKQVSSWNCEWDTKDDSMLLVGVYKFGYGSWVQIRDDPVLGLQNKLFLD 1171

Query: 819  ----------KDKTKKPQGKNLQVRVDYLLKLM 751
                      K   K P   +L  RVDYL  L+
Sbjct: 1172 SANSKESKEDKSAKKVPGAVHLGRRVDYLFTLL 1204




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