Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= H12I13_6
         (1845 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17534699|ref|NP_495216.1| fem-3 mRNA Binding Factor FBF-1, pu...  1214   0.0
gi|17534639|ref|NP_495220.1| fem-3 mRNA Binding Factor FBF-2, pu...  1085   0.0
gi|39597126|emb|CAE59353.1| Hypothetical protein CBG02702 [Caeno...   400   e-110
gi|39587850|emb|CAE67868.1| Hypothetical protein CBG13460 [Caeno...   382   e-104
gi|39597125|emb|CAE59352.1| Hypothetical protein CBG02701 [Caeno...   358   2e-97
gi|17541730|ref|NP_502606.1| PUmilio and FBF family member (56.9...   353   8e-96
gi|39590681|emb|CAE65051.1| Hypothetical protein CBG09894 [Caeno...   352   1e-95
gi|39587669|emb|CAE58607.1| Hypothetical protein CBG01774 [Caeno...   350   9e-95
gi|25153684|ref|NP_741425.1| pumilio-family RNA-binding protein ...   346   1e-93
gi|17535393|ref|NP_495814.1| PUmilio and FBF family member (62.6...   322   2e-86
gi|39587200|emb|CAE57668.1| Hypothetical protein CBG00661 [Caeno...   312   2e-83
gi|17541734|ref|NP_500820.1| PUmilio and FBF family member (54.8...   274   6e-72
gi|17535395|ref|NP_496773.1| PUmilio and FBF family member (54.9...   272   2e-71
gi|39580510|emb|CAE66511.1| Hypothetical protein CBG11800 [Caeno...   259   2e-67
gi|39584728|emb|CAE67623.1| Hypothetical protein CBG13175 [Caeno...   241   6e-62
gi|17510107|ref|NP_490694.1| PUmilio and FBF family member (puf-...   195   4e-48
gi|39584503|emb|CAE74581.1| Hypothetical protein CBG22348 [Caeno...   176   2e-42
gi|17541732|ref|NP_500301.1| PUmilio and FBF family member (puf-...   173   1e-41
gi|39592708|emb|CAE62322.1| Hypothetical protein CBG06390 [Caeno...   154   9e-36
gi|20513851|gb|AAM22812.1| BPM [Hordeum vulgare]                      133   1e-29
gi|6056191|gb|AAF02808.1| putative RNA binding protein [Arabidop...   130   8e-29
gi|22330960|ref|NP_187647.2| pumilio/Puf RNA-binding domain-cont...   130   1e-28
gi|8071634|gb|AAF71823.1| pumilio domain-containing protein PPD1...   129   2e-28
gi|30685690|ref|NP_188660.3| pumilio/Puf RNA-binding domain-cont...   129   2e-28
gi|42408517|dbj|BAD09696.1| putative pumilio-family RNA-binding ...   129   2e-28
gi|15227052|ref|NP_180483.1| pumilio/Puf RNA-binding domain-cont...   129   3e-28
gi|34863115|ref|XP_216661.2| similar to PUM1 [Rattus norvegicus]      128   4e-28
gi|20465637|gb|AAM20149.1| putative pumilio/Mpt5 family RNA-bind...   127   1e-27
gi|15227051|ref|NP_180482.1| pumilio/Puf RNA-binding domain-cont...   127   1e-27
gi|7496737|pir||T15717 hypothetical protein C30G12.7 - Caenorhab...   126   2e-27
gi|25146578|ref|NP_495523.2| PUmilio and FBF family member (puf-...   126   2e-27
gi|15227038|ref|NP_180478.1| pumilio/Puf RNA-binding domain-cont...   126   2e-27
gi|34908236|ref|NP_915465.1| putative pumilio/Mpt5 family RNA-bi...   125   3e-27
gi|13491168|ref|NP_056132.1| pumilio homolog 2; pumilio (Drosphi...   125   3e-27
gi|17224452|gb|AAL36981.1| translational repressor pumilio [Homo...   125   3e-27
gi|14719326|gb|AAK73144.1| putative pumilio/Mpt5 family RNA-bind...   125   3e-27
gi|27692665|gb|AAH41773.1| Pum2 protein [Mus musculus]                124   6e-27
gi|50552866|ref|XP_503843.1| hypothetical protein [Yarrowia lipo...   124   6e-27
gi|28972107|dbj|BAC65507.1| mKIAA0235 protein [Mus musculus]          124   6e-27
gi|50745075|ref|XP_419973.1| PREDICTED: similar to pumilio homol...   124   6e-27
gi|39644512|gb|AAH24218.2| PUM2 protein [Homo sapiens]                124   8e-27
gi|41688714|sp|Q8TB72|PUM2_HUMAN Pumilio homolog 2 (Pumilio2)         124   8e-27
gi|9293981|dbj|BAB01884.1| RNA binding protein-like [Arabidopsis...   124   8e-27
gi|8394|emb|CAA44474.1| pumilio [Drosophila melanogaster]             124   1e-26
gi|14277944|pdb|1IB2|A Chain A, Crystal Structure Of A Pumilio-H...   123   1e-26
gi|6681354|dbj|BAA07895.2| KIAA0099 protein [Homo sapiens]            123   1e-26
gi|13491166|ref|NP_055491.1| pumilio homolog 1; pumilio (Drosoph...   123   1e-26
gi|34906006|ref|NP_914350.1| P0518C01.14 [Oryza sativa (japonica...   123   2e-26
gi|13507678|ref|NP_109648.1| pumilio 2 [Mus musculus] >gnl|BL_OR...   123   2e-26
gi|41688655|sp|Q80U58|PUM2_MOUSE Pumilio homolog 2 >gnl|BL_ORD_I...   123   2e-26
gi|29748037|gb|AAH50747.1| Pum1 protein [Mus musculus]                122   3e-26
gi|16209558|gb|AAL14121.1| pumilio-like protein 1 [Xenopus laevis]    122   3e-26
gi|26450884|dbj|BAC42549.1| putative RNA binding protein [Arabid...   121   5e-26
gi|5106561|gb|AAD39751.1| RNA binding protein PufA [Dictyosteliu...   121   5e-26
gi|6323016|ref|NP_013088.1| member of the PUF protein family, wh...   121   5e-26
gi|24645262|ref|NP_731314.1| CG9755-PA [Drosophila melanogaster]...   121   5e-26
gi|423994|pir||A46221 abdominal segment formation protein pumili...   121   5e-26
gi|28804566|dbj|BAC57980.1| Pumilio [Xenopus laevis]                  121   5e-26
gi|45551850|ref|NP_731316.2| CG9755-PB [Drosophila melanogaster]...   121   5e-26
gi|28573153|ref|NP_788604.1| CG9755-PE [Drosophila melanogaster]...   121   5e-26
gi|50759604|ref|XP_417702.1| PREDICTED: similar to pumilio homol...   121   5e-26
gi|41688656|sp|Q80U78|PUM1_MOUSE Pumilio homolog 1                    121   6e-26
gi|13507676|ref|NP_109647.1| pumilio 1 [Mus musculus] >gnl|BL_OR...   121   6e-26
gi|34871681|ref|XP_342929.1| similar to mKIAA0099 protein [Rattu...   121   6e-26
gi|48097149|ref|XP_391849.1| similar to ENSANGP00000002715 [Apis...   121   6e-26
gi|29165749|gb|AAH48174.1| Pumilio 1 [Mus musculus]                   121   6e-26
gi|50286443|ref|XP_445650.1| unnamed protein product [Candida gl...   121   6e-26
gi|28972067|dbj|BAC65487.1| mKIAA0099 protein [Mus musculus]          121   6e-26
gi|48716356|dbj|BAD22967.1| pumilio-like [Oryza sativa (japonica...   120   8e-26
gi|33589344|gb|AAQ22439.1| RE63138p [Drosophila melanogaster]         120   8e-26
gi|23505401|gb|AAN37689.1| pumilio-like mating protein M90 [Phyt...   119   2e-25
gi|39582339|emb|CAE67588.1| Hypothetical protein CBG13130 [Caeno...   119   3e-25
gi|50311501|ref|XP_455775.1| unnamed protein product [Kluyveromy...   117   9e-25
gi|32488045|emb|CAE02858.1| OSJNBa0014F04.24 [Oryza sativa (japo...   117   1e-24
gi|31230305|ref|XP_318367.1| ENSANGP00000002715 [Anopheles gambi...   117   1e-24
gi|12082247|dbj|BAB20864.1| pumilio [Xenopus laevis]                  116   2e-24
gi|25150422|ref|NP_508980.2| PUmilio and FBF family member (78.5...   116   2e-24
gi|7509052|pir||T26218 hypothetical protein W06B11.2 - Caenorhab...   116   2e-24
gi|23479371|gb|EAA16219.1| RNA binding protein PufA [Plasmodium ...   115   3e-24
gi|18416639|ref|NP_567733.1| pumilio/Puf RNA-binding domain-cont...   115   3e-24
gi|39598118|emb|CAE68810.1| Hypothetical protein CBG14762 [Caeno...   115   3e-24
gi|45184672|ref|NP_982390.1| AAL152Wp [Eremothecium gossypii] >g...   115   4e-24
gi|50418943|ref|XP_457992.1| unnamed protein product [Debaryomyc...   112   4e-23
gi|47208830|emb|CAF90334.1| unnamed protein product [Tetraodon n...   112   4e-23
gi|15131678|emb|CAC48394.1| putative RNA binding protein [Saprol...   111   5e-23
gi|7484786|pir||T04242 abdominal segment formation protein pumil...   111   7e-23
gi|23510154|ref|NP_702820.1| RNA-binding protein of pumilio/mpt5...   110   1e-22
gi|46432746|gb|EAK92215.1| hypothetical protein CaO19.1795 [Cand...   108   4e-22
gi|11282577|pir||T50143 pumilio family protein [imported] - fiss...   105   4e-21
gi|19114053|ref|NP_593141.1| pumilio-like protein [Schizosacchar...   105   4e-21
gi|42573043|ref|NP_974618.1| pumilio/Puf RNA-binding domain-cont...   105   5e-21
gi|32411771|ref|XP_326366.1| hypothetical protein [Neurospora cr...   102   3e-20
gi|28394605|gb|AAO38522.1| pumilio RBD [Schistocerca americana]       101   7e-20
gi|49099032|ref|XP_410724.1| hypothetical protein AN6587.2 [Aspe...   100   2e-19
gi|35186936|gb|AAQ84130.1| pumilio protein 1 [Trypanosoma cruzi]       99   3e-19
gi|47216145|emb|CAG10019.1| unnamed protein product [Tetraodon n...    99   3e-19
gi|2204253|emb|CAA97457.1| unnamed protein product [Saccharomyce...    98   8e-19
gi|50259479|gb|EAL22152.1| hypothetical protein CNBC2900 [Crypto...    97   1e-18
gi|1297005|emb|CAA66165.1| unnamed protein product [Saccharomyce...    96   2e-18
gi|35186938|gb|AAQ84131.1| pumilio protein 2 [Trypanosoma cruzi]       95   6e-18
gi|19113974|ref|NP_593062.1| pumilio domain containing protein [...    92   3e-17
gi|23613209|ref|NP_703531.1| RNA-binding protein, putative [Plas...    92   3e-17
gi|25518535|pir||D86479 hypothetical protein F14D7.3 - Arabidops...    92   4e-17
gi|15220217|ref|NP_174811.1| pumilio/Puf RNA-binding domain-cont...    92   4e-17
gi|38105923|gb|EAA52293.1| hypothetical protein MG04985.4 [Magna...    91   1e-16
gi|23478929|gb|EAA15887.1| 00806 domains.-related [Plasmodium yo...    88   6e-16
gi|49073704|ref|XP_401046.1| hypothetical protein UM03431.1 [Ust...    87   1e-15
gi|19074973|ref|NP_586479.1| RNA-BINDING PROTEIN OF THE PUMILIO ...    87   1e-15
gi|794145|emb|CAA58660.1| MPT5=HTR1 [Saccharomyces cerevisiae]         87   1e-15
gi|6321260|ref|NP_011337.1| mRNA binding protein, specifically b...    87   1e-15
gi|730058|sp|P39016|MPT5_YEAST Suppressor protein MPT5 (HTR1 pro...    87   1e-15
gi|50260205|gb|EAL22866.1| hypothetical protein CNBB0870 [Crypto...    86   2e-15
gi|49084530|ref|XP_404457.1| hypothetical protein AN0320.2 [Aspe...    86   2e-15
gi|50407425|ref|XP_456710.1| unnamed protein product [Debaryomyc...    83   3e-14
gi|25518106|pir||B86355 F16L1.3 protein - Arabidopsis thaliana >...    82   3e-14
gi|15219849|ref|NP_173643.1| pumilio/Puf RNA-binding domain-cont...    82   3e-14
gi|45187817|ref|NP_984040.1| ADL056Wp [Eremothecium gossypii] >g...    82   6e-14
gi|50293245|ref|XP_449034.1| unnamed protein product [Candida gl...    82   6e-14
gi|50302921|ref|XP_451398.1| unnamed protein product [Kluyveromy...    80   2e-13
gi|50309115|ref|XP_454563.1| unnamed protein product [Kluyveromy...    79   3e-13
gi|35186940|gb|AAQ84132.1| pumilio protein 3 [Trypanosoma cruzi]       79   3e-13
gi|50419553|ref|XP_458303.1| unnamed protein product [Debaryomyc...    79   3e-13
gi|50284731|ref|XP_444793.1| unnamed protein product [Candida gl...    79   4e-13
gi|32415469|ref|XP_328214.1| hypothetical protein [Neurospora cr...    78   6e-13
gi|234327|gb|AAB19616.1| 98 kda [Saccharomyces cerevisiae] >gnl|...    78   6e-13
gi|15236630|ref|NP_192624.1| pumilio/Puf RNA-binding domain-cont...    78   8e-13
gi|6321424|ref|NP_011501.1| member of the PUF protein family; Pu...    77   1e-12
gi|50552736|ref|XP_503778.1| hypothetical protein [Yarrowia lipo...    77   1e-12
gi|22330712|ref|NP_177940.2| pumilio/Puf RNA-binding domain-cont...    77   2e-12
gi|19115035|ref|NP_594123.1| serine rich pumilio family rna bind...    77   2e-12
gi|25406544|pir||H96810 probable RNA-binding protein, 42664-4478...    77   2e-12
gi|38109451|gb|EAA55325.1| hypothetical protein MG06982.4 [Magna...    76   3e-12
gi|46107916|ref|XP_381017.1| hypothetical protein FG00841.1 [Gib...    74   9e-12
gi|46444151|gb|EAL03428.1| hypothetical protein CaO19.4991 [Cand...    74   1e-11
gi|45201010|ref|NP_986580.1| AGL086Cp [Eremothecium gossypii] >g...    74   1e-11
gi|38105096|gb|EAA51563.1| hypothetical protein MG03158.4 [Magna...    72   3e-11
gi|15489333|gb|AAH13765.1| Pum2 protein [Mus musculus]                 72   5e-11
gi|18958720|gb|AAL82701.1| Tcc1a22.1 [Trypanosoma cruzi]               72   6e-11
gi|6562659|emb|CAB62815.1| probable RNA-binding regulatory prote...    71   8e-11
gi|35186942|gb|AAQ84133.1| pumilio protein 4 [Trypanosoma cruzi]       70   2e-10
gi|11359455|pir||T49434 hypothetical protein B17C10.150 [importe...    69   3e-10
gi|16416090|emb|CAB91235.2| conserved hypothetical protein [Neur...    69   3e-10
gi|32415439|ref|XP_328199.1| hypothetical protein [Neurospora cr...    69   3e-10
gi|25518666|pir||F86479 hypothetical protein F14D7.5 [imported] ...    69   4e-10
gi|46124665|ref|XP_386886.1| hypothetical protein FG06710.1 [Gib...    69   5e-10
gi|15220219|ref|NP_174813.1| pumilio/Puf RNA-binding domain-cont...    68   8e-10
gi|46439384|gb|EAK98702.1| hypothetical protein CaO19.12836 [Can...    68   8e-10
gi|46439485|gb|EAK98802.1| hypothetical protein CaO19.5381 [Cand...    67   1e-09
gi|29250663|gb|EAA42153.1| GLP_480_50506_52464 [Giardia lamblia ...    65   6e-09
gi|22327888|ref|NP_200462.2| pumilio/Puf RNA-binding domain-cont...    64   9e-09
gi|19114599|ref|NP_593687.1| pumilio domain containing RNA bindi...    59   3e-07
gi|49093922|ref|XP_408422.1| hypothetical protein AN4285.2 [Aspe...    59   3e-07
gi|46121649|ref|XP_385379.1| hypothetical protein FG05203.1 [Gib...    59   5e-07
gi|19075301|ref|NP_587801.1| RNA binding protein, pumilio-family...    58   9e-07
gi|8809626|dbj|BAA97177.1| unnamed protein product [Arabidopsis ...    57   1e-06
gi|15239174|ref|NP_199123.1| pumilio/Puf RNA-binding domain-cont...    56   3e-06
gi|14517318|gb|AAK62674.1| PUF1 [Trypanosoma brucei]                   56   3e-06
gi|38347107|emb|CAE05084.2| OSJNBa0009K15.4 [Oryza sativa (japon...    54   1e-05
gi|22327539|ref|NP_199125.2| pumilio/Puf RNA-binding domain-cont...    52   6e-05
gi|9757838|dbj|BAB08275.1| unnamed protein product [Arabidopsis ...    51   8e-05
gi|35186944|gb|AAQ84134.1| pumilio protein 5 [Trypanosoma cruzi]       51   1e-04
gi|35186952|gb|AAQ84138.1| pumilio protein 9 [Trypanosoma cruzi]       48   0.001
gi|35186946|gb|AAQ84135.1| pumilio protein 6 [Trypanosoma cruzi]       47   0.001
gi|23508154|ref|NP_700824.1| hypothetical protein [Plasmodium fa...    44   0.013
gi|29247749|gb|EAA39302.1| GLP_532_33764_32247 [Giardia lamblia ...    43   0.029
gi|15238635|ref|NP_200826.1| pumilio/Puf RNA-binding domain-cont...    41   0.11
gi|8885569|dbj|BAA97499.1| unnamed protein product [Arabidopsis ...    41   0.11
gi|15238618|ref|NP_200819.1| pumilio/Puf RNA-binding domain-cont...    40   0.15
gi|15237851|ref|NP_200736.1| pumilio/Puf RNA-binding domain-cont...    40   0.25
gi|9759249|dbj|BAB09773.1| unnamed protein product [Arabidopsis ...    37   1.2
gi|15220239|ref|NP_174820.1| pumilio/Puf RNA-binding domain-cont...    37   1.2
gi|45593283|gb|AAS68191.1| vitellogenin precursor [Cherax quadri...    37   1.6
gi|49078714|ref|XP_403082.1| hypothetical protein UM05467.1 [Ust...    37   1.6
gi|47221942|emb|CAG08197.1| unnamed protein product [Tetraodon n...    36   2.7
gi|4757852|ref|NP_004319.1| BCS1-like; BCS1 (yeast homolog)-like...    36   3.6
gi|33096767|emb|CAE11877.1| hypothetical protein [Homo sapiens]        36   3.6
gi|34876825|ref|XP_217434.2| similar to BCS1-like [Rattus norveg...    36   3.6
gi|21313544|ref|NP_080060.1| BCS1-like [Mus musculus] >gnl|BL_OR...    36   3.6
gi|28277919|gb|AAH45990.1| Zgc:56205 protein [Danio rerio]             35   4.7
gi|46395758|sp|Q7ZV60|BCS1_BRARE Mitochondrial chaperone BCS1 (B...    35   4.7
gi|38347109|emb|CAE05086.2| OSJNBa0009K15.6 [Oryza sativa (japon...    35   4.7
gi|38073611|ref|XP_127105.4| expressed sequence AA408451 [Mus mu...    35   6.1
gi|29420437|dbj|BAC66469.1| tyrosine phosphatase CDC25 [Dictyost...    35   6.1
gi|49387789|dbj|BAD26354.1| pumilio/Puf RNA-binding domain-conta...    35   6.1
gi|34867533|ref|XP_234466.2| similar to Tetratricopeptide repeat...    35   6.1
gi|15219041|ref|NP_173581.1| pumilio/Puf RNA-binding domain-cont...    35   8.0
gi|25513459|pir||B86349 F8K7.3 protein - Arabidopsis thaliana >g...    35   8.0
gi|45361699|ref|NP_989423.1| fork head transcription factor FoxA...    35   8.0


>gi|17534699|ref|NP_495216.1| fem-3 mRNA Binding Factor FBF-1, pumilio
            family member (fbf-1) [Caenorhabditis elegans]
 gi|37078541|sp|Q9N5M6|FBF1_CAEEL Fem-3 mRNA binding factor 1
 gi|7206720|gb|AAF39879.1| Fem-3 mrna binding factor protein 1
            [Caenorhabditis elegans]
          Length = 614

 Score = 1214 bits (3141), Expect = 0.0
 Identities = 603/614 (98%), Positives = 603/614 (98%)
 Frame = -1

Query: 1845 MDQSKMRYTNQFRKTPQKPTSTEVGNHHTPAHSPMAQHETSMWNFNSLNPYFSMLNMNDG 1666
            MDQSKMRYTNQFRKTPQKPTSTEVGNHHTPAHSPMAQHETSMWNFNSLNPYFSMLNMNDG
Sbjct: 1    MDQSKMRYTNQFRKTPQKPTSTEVGNHHTPAHSPMAQHETSMWNFNSLNPYFSMLNMNDG 60

Query: 1665 MNYARHQQNHIVTSRPPTPLTDLMSLRSFQSFPNVFMPVSRSRTSSFIQSDTDSSRLEPD 1486
            MNYARHQQNHIVTSRPPTPLTDLMSLRSFQSFPNVFMPVSRSRTSSFIQSDTDSSRLEPD
Sbjct: 61   MNYARHQQNHIVTSRPPTPLTDLMSLRSFQSFPNVFMPVSRSRTSSFIQSDTDSSRLEPD 120

Query: 1485 DFSQNVRYCSTEIDRNNSSSKNDHLKYSRPALXXXXXXXXXXXNVLPTWSLDSNGEMRSR 1306
            DFSQNVRYCSTEIDRNNSSSKNDHLKYSRPAL           NVLPTWSLDSNGEMRSR
Sbjct: 121  DFSQNVRYCSTEIDRNNSSSKNDHLKYSRPALSRNSRSFTRSNNVLPTWSLDSNGEMRSR 180

Query: 1305 LSLSEVLDSGDLMKFAVDKTGCQFLEKAVKGSLTSYQKFQLFEQVIGRKDDFLKLSTNIF 1126
            LSLSEVLDSGDLMKFAVDKTGCQFLEKAVKGSLTSYQKFQLFEQVIGRKDDFLKLSTNIF
Sbjct: 181  LSLSEVLDSGDLMKFAVDKTGCQFLEKAVKGSLTSYQKFQLFEQVIGRKDDFLKLSTNIF 240

Query: 1125 GNYFVQEIIGMSLTTYDDDNIKRQEKLKNFISSQMTDMCLDKFACRVIQSSLQNMDLSLA 946
            GNYFVQEIIGMSLTTYDDDNIKRQEKLKNFISSQMTDMCLDKFACRVIQSSLQNMDLSLA
Sbjct: 241  GNYFVQEIIGMSLTTYDDDNIKRQEKLKNFISSQMTDMCLDKFACRVIQSSLQNMDLSLA 300

Query: 945  CKLVQALPRDARLIAICVDQNANHVIQKVVAVIPLKNWEFIVDFVATPEHLRQICFDKYG 766
            CKLVQALPRDARLIAICVDQNANHVIQKVVAVIPLKNWEFIVDFVATPEHLRQICFDKYG
Sbjct: 301  CKLVQALPRDARLIAICVDQNANHVIQKVVAVIPLKNWEFIVDFVATPEHLRQICFDKYG 360

Query: 765  CRVVQTIIEKLTADSINVDLTSAAQHLRERALQRLMTSVTNRCQELATNEYANYIIQHIV 586
            CRVVQTIIEKLTADSINVDLTSAAQHLRERALQRLMTSVTNRCQELATNEYANYIIQHIV
Sbjct: 361  CRVVQTIIEKLTADSINVDLTSAAQHLRERALQRLMTSVTNRCQELATNEYANYIIQHIV 420

Query: 585  SNDDLAVYRECIIEKCLMRNLLSLSQEKFASHVVEKAFLHAPMELLAEMMDEIFDGYMPH 406
            SNDDLAVYRECIIEKCLMRNLLSLSQEKFASHVVEKAFLHAPMELLAEMMDEIFDGYMPH
Sbjct: 421  SNDDLAVYRECIIEKCLMRNLLSLSQEKFASHVVEKAFLHAPMELLAEMMDEIFDGYMPH 480

Query: 405  PGTGKDALDIMMFHQFGNYVVQCMLTICCDAVSGRRQTKEGSYDHANSFQVWLKKLHSRV 226
            PGTGKDALDIMMFHQFGNYVVQCMLTICCDAVSGRRQTKEGSYDHANSFQVWLKKLHSRV
Sbjct: 481  PGTGKDALDIMMFHQFGNYVVQCMLTICCDAVSGRRQTKEGSYDHANSFQVWLKKLHSRV 540

Query: 225  TKERHRLSRFSSGKKMIETLAHLRSTHPIYGLQSSGHESFKTDCFSTASEHDGLELEKNG 46
            TKERHRLSRFSSGKKMIETLAHLRSTHPIYGLQSSGHESFKTDCFSTASEHDGLELEKNG
Sbjct: 541  TKERHRLSRFSSGKKMIETLAHLRSTHPIYGLQSSGHESFKTDCFSTASEHDGLELEKNG 600

Query: 45   IEEGNLRLMRTFSP 4
            IEEGNLRLMRTFSP
Sbjct: 601  IEEGNLRLMRTFSP 614


>gi|17534639|ref|NP_495220.1| fem-3 mRNA Binding Factor FBF-2, pumilio
            family member (71.8 kD) (fbf-2) [Caenorhabditis elegans]
 gi|2496963|sp|Q09312|FBF2_CAEEL Fem-3 mRNA binding factor 2
 gi|7499607|pir||T16128 hypothetical protein F21H12.5 - Caenorhabditis
            elegans
 gi|726408|gb|AAC46716.1| Fem-3 mrna binding factor protein 2
            [Caenorhabditis elegans]
          Length = 632

 Score = 1085 bits (2805), Expect = 0.0
 Identities = 550/610 (90%), Positives = 567/610 (92%), Gaps = 2/610 (0%)
 Frame = -1

Query: 1845 MDQSKMRYTNQFRKTPQKPTSTEVGNHHTPAHSPMAQHETSMWNFNSLNPYFSMLNMNDG 1666
            MDQSKMR TNQFRKT QKP ST + ++ TPA SPMAQHET MW+FNSLNPYFSMLNMNDG
Sbjct: 1    MDQSKMRRTNQFRKTSQKPPSTGIDSYPTPAQSPMAQHETPMWDFNSLNPYFSMLNMNDG 60

Query: 1665 MNYARHQQNHIVTSRPPTPLTDLMSLRSFQSFPNVFMPVSRSRTSSFIQSDTDSSRLEPD 1486
            +NYARHQQNHIVTSRPPTPLTDLMSLRSFQSFPNVFMPVSRSRTSSFIQSDTDSSRLE D
Sbjct: 61   INYARHQQNHIVTSRPPTPLTDLMSLRSFQSFPNVFMPVSRSRTSSFIQSDTDSSRLESD 120

Query: 1485 DFSQNVRYCSTEIDRNNS--SSKNDHLKYSRPALXXXXXXXXXXXNVLPTWSLDSNGEMR 1312
            DFSQNVR  S +IDR+ S  SSK+ HLKYSRPAL           NVLPTWSLDSNGEMR
Sbjct: 121  DFSQNVRCFSADIDRSKSYGSSKHYHLKYSRPALSRNSRSFTRSNNVLPTWSLDSNGEMR 180

Query: 1311 SRLSLSEVLDSGDLMKFAVDKTGCQFLEKAVKGSLTSYQKFQLFEQVIGRKDDFLKLSTN 1132
            SRLSLSEVLDSGDLMKFAVDKTGCQFLEKAVKGSLTSYQKFQLFEQVIGRKDDFLKLSTN
Sbjct: 181  SRLSLSEVLDSGDLMKFAVDKTGCQFLEKAVKGSLTSYQKFQLFEQVIGRKDDFLKLSTN 240

Query: 1131 IFGNYFVQEIIGMSLTTYDDDNIKRQEKLKNFISSQMTDMCLDKFACRVIQSSLQNMDLS 952
            IFGNY VQ +IG+SL T DD   KRQEKLKNFISSQMTDMCLDKFACRVIQSSLQNMDLS
Sbjct: 241  IFGNYLVQSVIGISLATNDDGYTKRQEKLKNFISSQMTDMCLDKFACRVIQSSLQNMDLS 300

Query: 951  LACKLVQALPRDARLIAICVDQNANHVIQKVVAVIPLKNWEFIVDFVATPEHLRQICFDK 772
            LACKLVQALPRDARLIAICVDQNANHVIQKVVAVIPLKNWEFIVDFVATPEHLRQIC DK
Sbjct: 301  LACKLVQALPRDARLIAICVDQNANHVIQKVVAVIPLKNWEFIVDFVATPEHLRQICSDK 360

Query: 771  YGCRVVQTIIEKLTADSINVDLTSAAQHLRERALQRLMTSVTNRCQELATNEYANYIIQH 592
            YGCRVVQTIIEKLTADS+NVDLTSAAQ+LRERALQRLMTSVTNRCQELATNEYANYIIQH
Sbjct: 361  YGCRVVQTIIEKLTADSMNVDLTSAAQNLRERALQRLMTSVTNRCQELATNEYANYIIQH 420

Query: 591  IVSNDDLAVYRECIIEKCLMRNLLSLSQEKFASHVVEKAFLHAPMELLAEMMDEIFDGYM 412
            IVSNDDLAVYRECIIEKCLMRNLLSLSQEKFASHVVEKAFLHAP+ELLAEMMDEIFDGY+
Sbjct: 421  IVSNDDLAVYRECIIEKCLMRNLLSLSQEKFASHVVEKAFLHAPLELLAEMMDEIFDGYI 480

Query: 411  PHPGTGKDALDIMMFHQFGNYVVQCMLTICCDAVSGRRQTKEGSYDHANSFQVWLKKLHS 232
            PHP TGKDALDIMMFHQFGNYVVQCMLTICCDAVSGRRQTKEG YDHA SFQ WLKKLHS
Sbjct: 481  PHPDTGKDALDIMMFHQFGNYVVQCMLTICCDAVSGRRQTKEGGYDHAISFQDWLKKLHS 540

Query: 231  RVTKERHRLSRFSSGKKMIETLAHLRSTHPIYGLQSSGHESFKTDCFSTASEHDGLELEK 52
            RVTKERHRLSRFSSGKKMIETLA+LRSTHPIY LQSSGH+SFKTD FSTASEHDG ELEK
Sbjct: 541  RVTKERHRLSRFSSGKKMIETLANLRSTHPIYELQSSGHDSFKTDYFSTASEHDGPELEK 600

Query: 51   NGIEEGNLRL 22
            NGIEEG+L L
Sbjct: 601  NGIEEGSLML 610




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