Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= H24O09_2
         (1041 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17561952|ref|NP_503305.1| cyclin-like F-box family member (5B...   680   0.0
gi|17567597|ref|NP_508559.1| cyclin-like F-box family member (XD...   256   5e-67
gi|17550770|ref|NP_510808.1| cyclin-like F-box family member (XR...   238   2e-61
gi|17555320|ref|NP_499788.1| cyclin-like F-box family member (3O...    99   1e-19
gi|25153988|ref|NP_740980.1| cyclin-like F-box family member (42...    98   3e-19
gi|7496931|pir||T15749 hypothetical protein C33F10.8 - Caenorhab...    97   6e-19
gi|29570440|gb|AAO91704.1| Hypothetical protein R08C7.13 [Caenor...    96   1e-18
gi|7498363|pir||T32607 hypothetical protein E04A4.1 - Caenorhabd...    96   1e-18
gi|17541840|ref|NP_500565.1| cyclin-like F-box family member (4F...    96   1e-18
gi|32566327|ref|NP_500625.2| predicted CDS, cyclin-like F-box fa...    96   1e-18
gi|7506472|pir||T29660 hypothetical protein R08C7.9 - Caenorhabd...    96   1e-18
gi|17541590|ref|NP_501431.1| cyclin-like F-box family member (4J...    89   2e-16
gi|31746673|gb|AAC16976.2| Hypothetical protein C33E10.1 [Caenor...    80   6e-14
gi|17554632|ref|NP_499389.1| cyclin-like F-box family member (3L...    79   2e-13
gi|17561462|ref|NP_507756.1| predicted CDS, cyclin-like F-box fa...    76   1e-12
gi|17540294|ref|NP_502240.1| cyclin-like F-box family member (4M...    76   1e-12
gi|17561468|ref|NP_507759.1| predicted CDS, cyclin-like F-box fa...    76   1e-12
gi|17511127|ref|NP_493609.1| putative mitochondrial protein fami...    75   2e-12
gi|17531811|ref|NP_494100.1| predicted CDS, cyclin-like F-box fa...    74   4e-12
gi|29570442|gb|AAO91706.1| Hypothetical protein R08C7.9 [Caenorh...    74   7e-12
gi|17555104|ref|NP_497155.1| cyclin-like F-box family member (3A...    73   1e-11
gi|17540100|ref|NP_500515.1| predicted CDS, transposase (4E982) ...    72   3e-11
gi|17555102|ref|NP_497154.1| cyclin-like F-box family member (3A...    69   1e-10
gi|17543002|ref|NP_500634.1| cyclin-like F-box family member (4F...    69   2e-10
gi|17507461|ref|NP_493498.1| cyclin-like F-box family member (1O...    68   4e-10
gi|17560014|ref|NP_507744.1| predicted CDS, putative protein fam...    67   9e-10
gi|39587416|emb|CAE75070.1| Hypothetical protein CBG22986 [Caeno...    67   9e-10
gi|17531651|ref|NP_494079.1| cyclin-like F-box family member (2C...    67   9e-10
gi|17532533|ref|NP_494097.1| cyclin-like F-box family member (2C...    66   1e-09
gi|7498705|pir||T20640 hypothetical protein F09C3.3 - Caenorhabd...    65   2e-09
gi|17506553|ref|NP_493495.1| predicted CDS, cyclin-like F-box fa...    65   2e-09
gi|17540942|ref|NP_502146.1| predicted CDS, cyclin-like F-box fa...    65   3e-09
gi|17532979|ref|NP_494358.1| predicted CDS, cyclin-like F-box fa...    65   3e-09
gi|17565318|ref|NP_507398.1| predicted CDS, putative protein fam...    64   6e-09
gi|17536893|ref|NP_494653.1| predicted CDS, cyclin-like F-box fa...    64   7e-09
gi|17533147|ref|NP_494640.1| short-chain dehydrogenase family me...    64   7e-09
gi|17539594|ref|NP_500624.1| predicted CDS, putative cytoplasmic...    63   1e-08
gi|17534513|ref|NP_494042.1| cyclin-like F-box family member (2B...    63   1e-08
gi|17532981|ref|NP_494359.1| cyclin-like F-box family member (2D...    62   2e-08
gi|17552604|ref|NP_499398.1| cyclin-like F-box family member (3L...    62   2e-08
gi|17532977|ref|NP_494357.1| cyclin-like F-box family member (2D...    62   2e-08
gi|17509951|ref|NP_493362.1| cyclin-like F-box family member (1O...    62   2e-08
gi|7498624|pir||T25674 hypothetical protein F08D12.6 - Caenorhab...    62   3e-08
gi|17532973|ref|NP_494355.1| predicted CDS, cyclin-like F-box fa...    62   3e-08
gi|17507459|ref|NP_493499.1| cyclin-like F-box family member (1O...    61   4e-08
gi|17533245|ref|NP_496662.1| cyclin-like F-box family member (2M...    61   4e-08
gi|17534501|ref|NP_494039.1| cyclin-like F-box family member (2B...    61   4e-08
gi|7503792|pir||T22401 hypothetical protein F49B2.1 - Caenorhabd...    61   4e-08
gi|17534271|ref|NP_494693.1| cyclin-like F-box family member (2E...    61   5e-08
gi|17510357|ref|NP_493459.1| predicted CDS, cyclin-like F-box fa...    60   6e-08
gi|17533549|ref|NP_494354.1| cyclin-like F-box family member (2D...    60   1e-07
gi|17534511|ref|NP_494041.1| predicted CDS, cyclin-like F-box fa...    59   2e-07
gi|17558588|ref|NP_507762.1| serpentine Receptor, class H (srh-2...    57   5e-07
gi|38174876|emb|CAE53731.1| Hypothetical protein C43D7.9 [Caenor...    57   5e-07
gi|17555108|ref|NP_497157.1| very Early Transcript VET-3, cyclin...    57   7e-07
gi|17537759|ref|NP_494024.1| cyclin-like F-box family member (2B...    56   1e-06
gi|17564738|ref|NP_507741.1| cyclin-like F-box family member (5T...    56   2e-06
gi|17532545|ref|NP_494094.1| cyclin-like F-box family member (2C...    55   3e-06
gi|17560016|ref|NP_507743.1| cyclin-like F-box family member (5T...    54   6e-06
gi|17541818|ref|NP_502100.1| putative cytoplasmic protein family...    54   8e-06
gi|17537289|ref|NP_494560.1| predicted CDS, cyclin-like F-box fa...    54   8e-06
gi|17557382|ref|NP_507586.1| putative protein family member (5S7...    51   4e-05
gi|17537357|ref|NP_493989.1| cyclin-like F-box family member (2B...    51   4e-05
gi|7507908|pir||T33429 hypothetical protein T17A3.6 - Caenorhabd...    51   4e-05
gi|17534927|ref|NP_493999.1| cyclin-like F-box family member (2B...    51   4e-05
gi|7497385|pir||T19919 hypothetical protein C44B9.5 - Caenorhabd...    51   4e-05
gi|17555106|ref|NP_497156.1| putative cytoplasmic protein family...    51   4e-05
gi|17534911|ref|NP_493998.1| predicted CDS, putative cytoplasmic...    51   5e-05
gi|17558582|ref|NP_507766.1| cyclin-like F-box family member (5T...    50   9e-05
gi|17537761|ref|NP_494025.1| cyclin-like F-box family member (2B...    50   1e-04
gi|17534919|ref|NP_493991.1| predicted CDS, serum paraoxonase ar...    50   1e-04
gi|17536311|ref|NP_494178.1| predicted CDS, cyclin-like F-box fa...    50   1e-04
gi|7497305|pir||T32324 hypothetical protein C41H7.2 - Caenorhabd...    49   1e-04
gi|17510373|ref|NP_493458.1| cyclin-like F-box family member (1O...    49   1e-04
gi|17533773|ref|NP_494069.1| cyclin-like F-box family member (2C...    49   2e-04
gi|17568467|ref|NP_508301.1| predicted CDS, putative protein fam...    49   2e-04
gi|17510369|ref|NP_493456.1| cyclin-like F-box family member (1O...    49   2e-04
gi|17506557|ref|NP_493494.1| cyclin-like F-box family member (1O...    48   3e-04
gi|17510355|ref|NP_493460.1| cyclin-like F-box family member (1O...    48   3e-04
gi|17532983|ref|NP_494360.1| cyclin-like F-box family member (2D...    48   3e-04
gi|17537355|ref|NP_493990.1| cyclin-like F-box family member (2B...    48   4e-04
gi|32565853|ref|NP_872062.1| predicted CDS, putative cytoplasmic...    48   4e-04
gi|39585960|emb|CAE68249.1| Hypothetical protein CBG13925 [Caeno...    48   4e-04
gi|38176033|gb|AAB70998.3| Hypothetical protein M01D1.2 [Caenorh...    47   6e-04
gi|32564823|ref|NP_493891.2| Meprin/TRAF-like MATH family member...    47   6e-04
gi|25395396|pir||B88035 protein M01D1.2 [imported] - Caenorhabdi...    47   6e-04
gi|17536137|ref|NP_494083.1| predicted CDS, cyclin-like F-box fa...    47   7e-04
gi|17533763|ref|NP_494071.1| predicted CDS, cyclin-like F-box fa...    47   0.001
gi|17532265|ref|NP_494204.1| cyclin-like F-box family member (2C...    47   0.001
gi|7505154|pir||T32391 hypothetical protein K02E7.5 - Caenorhabd...    47   0.001
gi|17533767|ref|NP_494067.1| cyclin-like F-box family member (2C...    46   0.002
gi|17534505|ref|NP_494036.1| cyclin-like F-box family member (2B...    46   0.002
gi|17561466|ref|NP_507758.1| predicted CDS, attractin like famil...    45   0.002
gi|17534055|ref|NP_494058.1| cyclin-like F-box family member (2C...    45   0.002
gi|39585954|emb|CAE68243.1| Hypothetical protein CBG13917 [Caeno...    45   0.002
gi|17534073|ref|NP_494056.1| predicted CDS, cyclin-like F-box fa...    45   0.003
gi|17539858|ref|NP_500533.1| putative protein family member (4F5...    45   0.003
gi|17538558|ref|NP_502092.1| cyclin-like F-box family member (4L...    45   0.004
gi|17535155|ref|NP_493897.1| cyclin-like F-box family member (2B...    44   0.005
gi|17535961|ref|NP_493775.1| cyclin-like F-box family member (2A...    44   0.006
gi|17541606|ref|NP_502237.1| cyclin-like F-box family member (4M...    44   0.006
gi|49035103|gb|AAB66212.2| Hypothetical protein F45C12.14 [Caeno...    44   0.008
gi|17534923|ref|NP_493995.1| cyclin-like F-box family member (2B...    43   0.010
gi|39583709|emb|CAE63813.1| Hypothetical protein CBG08363 [Caeno...    43   0.014
gi|17510619|ref|NP_490869.1| predicted CDS, putative cytoplasmic...    43   0.014
gi|17534091|ref|NP_493878.1| cyclin-like F-box family member (2B...    42   0.018
gi|17532913|ref|NP_494167.1| cyclin-like F-box family member (36...    42   0.018
gi|17550704|ref|NP_510738.1| putative protein family member (XR5...    42   0.023
gi|17561450|ref|NP_507750.1| cyclin-like F-box family member (5T...    42   0.023
gi|17561456|ref|NP_507753.1| cyclin-like F-box family member (5T...    42   0.030
gi|32565172|ref|NP_493903.2| putative protein family member (13....    42   0.030
gi|39586059|emb|CAE69135.1| Hypothetical protein CBG15162 [Caeno...    42   0.030
gi|17534917|ref|NP_493992.1| predicted CDS, cyclin-like F-box fa...    41   0.040
gi|17537755|ref|NP_494026.1| cyclin-like F-box family member (2B...    41   0.040
gi|39582266|emb|CAE64217.1| Hypothetical protein CBG08850 [Caeno...    41   0.052
gi|17543454|ref|NP_502619.1| predicted CDS, putative cytoplasmic...    40   0.068
gi|49035188|gb|AAK67220.3| Hypothetical protein C52E2.6 [Caenorh...    40   0.068
gi|17564740|ref|NP_507740.1| cyclin-like F-box family member (5T...    40   0.068
gi|7506054|pir||T32302 hypothetical protein M151.6 - Caenorhabdi...    40   0.068
gi|32565225|ref|NP_494093.2| putative cytoplasmic protein family...    40   0.068
gi|17556282|ref|NP_499546.1| cyclin-like F-box family member (3M...    40   0.088
gi|17532051|ref|NP_493732.1| putative cytoplasmic protein family...    40   0.12
gi|17561464|ref|NP_507757.1| predicted CDS, attractin like famil...    40   0.12
gi|32699231|gb|AAB71205.2| Hypothetical protein C24H12.9 [Caenor...    40   0.12
gi|39587408|emb|CAE75062.1| Hypothetical protein CBG22977 [Caeno...    40   0.12
gi|17564742|ref|NP_507739.1| predicted CDS, cyclin-like F-box fa...    39   0.15
gi|17532035|ref|NP_493736.1| cyclin-like F-box family member (2A...    39   0.15
gi|32564870|ref|NP_494603.2| putative mitochondrial protein fami...    39   0.15
gi|17537757|ref|NP_494023.1| predicted CDS, cyclin-like F-box fa...    39   0.15
gi|17535149|ref|NP_493895.1| cyclin-like F-box family member (2B...    39   0.15
gi|17534071|ref|NP_494055.1| putative protein family member (2C6...    39   0.20
gi|17556272|ref|NP_499540.1| cyclin-like F-box family member (3M...    39   0.20
gi|7510650|pir||T25956 hypothetical protein ZC204.7 - Caenorhabd...    39   0.26
gi|39587417|emb|CAE75071.1| Hypothetical protein CBG22987 [Caeno...    39   0.26
gi|17558866|ref|NP_504399.1| cyclin-like F-box family member (5F...    39   0.26
gi|50507808|emb|CAB04476.2| Hypothetical protein F55C9.11 [Caeno...    38   0.34
gi|17561470|ref|NP_507760.1| cyclin-like F-box family member (5T...    38   0.34
gi|17535151|ref|NP_493896.1| cyclin-like F-box family member (2B...    38   0.44
gi|17564748|ref|NP_507736.1| acyltransferase 3 family (5T697) [C...    37   0.57
gi|17556284|ref|NP_499547.1| predicted CDS, cyclin-like F-box fa...    37   0.57
gi|17555720|ref|NP_499353.1| cyclin-like F-box family member (3L...    37   0.57
gi|39588214|emb|CAE68139.1| Hypothetical protein CBG13790 [Caeno...    37   0.75
gi|17564736|ref|NP_507742.1| cyclin-like F-box family member (5T...    37   0.75
gi|39588220|emb|CAE68145.1| Hypothetical protein CBG13797 [Caeno...    37   0.98
gi|28870017|ref|NP_792636.1| macrolide ABC efflux protein MacB [...    36   1.3
gi|17537845|ref|NP_494136.1| predicted CDS, Meprin/TRAF-like MAT...    36   1.7
gi|17508809|ref|NP_493003.1| cyclin-like F-box family member (1M...    36   1.7
gi|7511050|pir||T32417 hypothetical protein ZK250.6 - Caenorhabd...    36   1.7
gi|17510371|ref|NP_493457.1| cyclin-like F-box (1O679) [Caenorha...    36   1.7
gi|39588219|emb|CAE68144.1| Hypothetical protein CBG13796 [Caeno...    35   2.2
gi|7510647|pir||T25950 hypothetical protein ZC204.4 - Caenorhabd...    35   2.2
gi|17532919|ref|NP_494169.1| predicted CDS, putative protein fam...    35   2.8
gi|26553605|ref|NP_757539.1| predicted coiled-coil structure con...    35   3.7
gi|17558592|ref|NP_507761.1| cyclin-like F-box family member (5T...    35   3.7
gi|39583277|emb|CAE60069.1| Hypothetical protein CBG03586 [Caeno...    34   4.8
gi|39585522|emb|CAE65282.1| Hypothetical protein CBG10182 [Caeno...    34   4.8
gi|49090700|ref|XP_406811.1| hypothetical protein AN2674.2 [Aspe...    34   4.8
gi|39588213|emb|CAE68138.1| Hypothetical protein CBG13789 [Caeno...    34   6.3
gi|39588295|emb|CAE72646.1| Hypothetical protein CBG19852 [Caeno...    34   6.3
gi|17537295|ref|NP_494557.1| putative protein family member (2D7...    33   8.3
gi|39588217|emb|CAE68142.1| Hypothetical protein CBG13793 [Caeno...    33   8.3
gi|17534915|ref|NP_493994.1| predicted CDS, putative cytoplasmic...    33   8.3
gi|17510081|ref|NP_493053.1| cyclin-like F-box family member (1M...    33   8.3
gi|17566476|ref|NP_507899.1| cyclin-like F-box family member (5U...    33   8.3
gi|7505335|pir||T32848 hypothetical protein K05F6.7 - Caenorhabd...    33   8.3
gi|46136995|ref|XP_390189.1| hypothetical protein FG10013.1 [Gib...    33   8.3
gi|32698452|emb|CAB60388.2| Hypothetical protein Y47H10A.2 [Caen...    33   8.3


>gi|17561952|ref|NP_503305.1| cyclin-like F-box family member (5B202)
            [Caenorhabditis elegans]
 gi|7206744|gb|AAF39903.1| Hypothetical protein H24O09.2
            [Caenorhabditis elegans]
          Length = 346

 Score =  680 bits (1755), Expect = 0.0
 Identities = 337/346 (97%), Positives = 337/346 (97%)
 Frame = -1

Query: 1041 MNILRLPTKALRCTLQHWPLLEILTFSLFSKKTKNLSKSLHRSALSISVNVEELIELKIQ 862
            MNILRLPTKALRCTLQHWPLLEILTFSLFSKKTKNLSKSLHRSALSISVNVEELIELKIQ
Sbjct: 1    MNILRLPTKALRCTLQHWPLLEILTFSLFSKKTKNLSKSLHRSALSISVNVEELIELKIQ 60

Query: 861  IARRDTINFIFYTSRYRANPYYDPNAGVVLIDNPDEYIGIVDTTKNSRIWMHFPNMGIRD 682
            IARRDTINFIFYTSRYRANPYYDPNAGVVLIDNPDEYIGIVDTTKNSRIWMHFPNMGIRD
Sbjct: 61   IARRDTINFIFYTSRYRANPYYDPNAGVVLIDNPDEYIGIVDTTKNSRIWMHFPNMGIRD 120

Query: 681  FVDHFFDVLSLSKLDEFSISKDNYCTQEFCDEFKELDVQTFVSPLQMDNSSFYQKIIRMF 502
            FVDHFFDVLSLSKLDEFSISKDNYCTQEFCDEFKELDVQTFVSPLQMDNSSFYQKIIRMF
Sbjct: 121  FVDHFFDVLSLSKLDEFSISKDNYCTQEFCDEFKELDVQTFVSPLQMDNSSFYQKIIRMF 180

Query: 501  SSRSKRLDFGLPTFPFKTHTAQEXXXXXXXXXQILYKCSLVEVLSINSTLIYGEDLIGVN 322
            SSRSKRLDFGLPTFPFKTHTAQE         QILYKCSLVEVLSINSTLIYGEDLIGVN
Sbjct: 181  SSRSKRLDFGLPTFPFKTHTAQEFMFQNFNFFQILYKCSLVEVLSINSTLIYGEDLIGVN 240

Query: 321  QLNVFLRHWINGSNPRLEYFQFYVYLQTSLEDLFSIIFNKVNYQRQPDSLLRAFCLSVQG 142
            QLNVFLRHWINGSNPRLEYFQFYVYLQTSLEDLFSIIFNKVNYQRQPDSLLRAFCLSVQG
Sbjct: 241  QLNVFLRHWINGSNPRLEYFQFYVYLQTSLEDLFSIIFNKVNYQRQPDSLLRAFCLSVQG 300

Query: 141  YDDLIYNLKKIKGGMDIERTDGARATVKINGVGHNHFVQFFKWDNN 4
            YDDLIYNLKKIKGGMDIERTDGARATVKINGVGHNHFVQFFKWDNN
Sbjct: 301  YDDLIYNLKKIKGGMDIERTDGARATVKINGVGHNHFVQFFKWDNN 346




[DB home][top]