Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= K01G5_6
(1338 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17553978|ref|NP_499370.1| centromere microtubule binding prot... 824 0.0
gi|39591828|emb|CAE71406.1| Hypothetical protein CBG18316 [Caeno... 813 0.0
gi|4503337|ref|NP_001354.1| dyskerin [Homo sapiens] >gnl|BL_ORD_... 574 e-162
gi|5542014|emb|CAB51168.1| dyskerin [Homo sapiens] 574 e-162
gi|2737894|gb|AAB94299.1| Cbf5p homolog 573 e-162
gi|19528063|gb|AAL90146.1| AT23018p [Drosophila melanogaster] 573 e-162
gi|14602859|gb|AAH09928.1| Dyskerin [Homo sapiens] 573 e-162
gi|17975520|ref|NP_525120.1| CG3333-PA [Drosophila melanogaster]... 573 e-162
gi|25031216|ref|XP_204426.1| similar to DYSKERIN [Mus musculus] ... 571 e-161
gi|4406198|gb|AAD19897.1| minifly protein [Drosophila melanogaster] 569 e-161
gi|1083739|pir||A55163 nucleolar protein Nopp140, hepatic - rat ... 564 e-159
gi|19173790|ref|NP_596910.1| dyskeratosis congenita 1, dyskerin ... 564 e-159
gi|9931991|emb|CAC04528.1| DYSKERIN [Mus musculus] 563 e-159
gi|28839578|gb|AAH47840.1| Dkc1 protein [Danio rerio] 557 e-157
gi|31228593|ref|XP_318082.1| ENSANGP00000017710 [Anopheles gambi... 555 e-157
gi|50258601|gb|EAL21288.1| hypothetical protein CNBD3420 [Crypto... 553 e-156
gi|49068022|ref|XP_398300.1| hypothetical protein UM00685.1 [Ust... 549 e-155
gi|45184817|ref|NP_982535.1| AAL007Cp [Eremothecium gossypii] >g... 546 e-154
gi|6323204|ref|NP_013276.1| major low affinity 55 kDa Centromere... 546 e-154
gi|50552986|ref|XP_503903.1| hypothetical protein [Yarrowia lipo... 544 e-153
gi|15230232|ref|NP_191274.1| dyskerin, putative / nucleolar prot... 543 e-153
gi|3334141|sp|O43101|CBF5_CANAL Centromere/microtubule binding p... 543 e-153
gi|50289049|ref|XP_446954.1| unnamed protein product [Candida gl... 540 e-152
gi|50306599|ref|XP_453273.1| CBF5_KLULA [Kluyveromyces lactis] >... 540 e-152
gi|50426879|ref|XP_462038.1| unnamed protein product [Debaryomyc... 537 e-151
gi|34896278|ref|NP_909483.1| putative centromere/microtubule bin... 531 e-149
gi|19115790|ref|NP_594878.1| centromere/microtubule binding prot... 530 e-149
gi|23237811|dbj|BAC16386.1| putative centromere/microtubule bind... 528 e-148
gi|46125657|ref|XP_387382.1| hypothetical protein FG07206.1 [Gib... 526 e-148
gi|3334140|sp|O43100|CBF5_EMENI Centromere/microtubule binding p... 526 e-148
gi|3334142|sp|O43102|CBF5_ASPFU Centromere/microtubule binding p... 522 e-147
gi|46228344|gb|EAK89243.1| Cbf5p; centromere-binding factor 5 li... 520 e-146
gi|49130688|ref|XP_412988.1| CBF5_EMENI Centromere/microtubule b... 518 e-145
gi|32412606|ref|XP_326783.1| hypothetical protein [Neurospora cr... 502 e-141
gi|7530123|emb|CAB86704.1| probable dyskerin [Leishmania major] 496 e-139
gi|8572671|gb|AAF77119.1| Cbf5p [Euglena gracilis] 495 e-138
gi|7378766|emb|CAB85492.1| putative kinetochore protein [Hordeum... 494 e-138
gi|23509395|ref|NP_702062.1| hypothetical protein, conserved [Pl... 486 e-136
gi|23481090|gb|EAA17472.1| unknown protein-related [Plasmodium y... 484 e-135
gi|48141592|ref|XP_397244.1| similar to CG3333-PA [Apis mellifera] 454 e-126
gi|19173642|ref|NP_597445.1| CENTROMERE/MICROTUBULE BINDING PROT... 392 e-108
gi|29245843|gb|EAA37462.1| GLP_576_9913_8648 [Giardia lamblia AT... 377 e-103
gi|47214790|emb|CAF89617.1| unnamed protein product [Tetraodon n... 349 1e-94
gi|50745664|ref|XP_420191.1| PREDICTED: similar to Dyskerin (Nuc... 254 2e-66
gi|15678063|ref|NP_275177.1| centromere/microtubule-binding prot... 253 6e-66
gi|20089974|ref|NP_616049.1| rRNA pseudouridine synthase [Methan... 251 2e-65
gi|48838711|ref|ZP_00295651.1| COG0130: Pseudouridine synthase [... 251 3e-65
gi|20093573|ref|NP_613420.1| Pseudouridine synthase of the TruB ... 249 1e-64
gi|14520738|ref|NP_126213.1| probable trna pseudouridine synthas... 249 1e-64
gi|46142085|ref|ZP_00147704.2| COG0130: Pseudouridine synthase [... 249 1e-64
gi|21228256|ref|NP_634178.1| tRNA pseudouridine synthase [Methan... 246 9e-64
gi|11497854|ref|NP_069076.1| centromere/microtubule-binding prot... 245 2e-63
gi|15668320|ref|NP_247116.1| centromere/microtubule-binding prot... 245 2e-63
gi|18978157|ref|NP_579514.1| hypothetical centromere binding pro... 243 8e-63
gi|14591414|ref|NP_143494.1| centromere/microtubule binding prot... 242 2e-62
gi|45359249|ref|NP_988806.1| pseudouridine syntase related prote... 228 2e-58
gi|18312233|ref|NP_558900.1| tRNA pseudouridine synthase B [Pyro... 221 3e-56
gi|41615239|ref|NP_963737.1| NEQ454 [Nanoarchaeum equitans Kin4-... 205 2e-51
gi|15897325|ref|NP_341930.1| tRNA pseudouridine synthase subunit... 183 7e-45
gi|48477739|ref|YP_023445.1| tRNA pseudouridine 55 synthase [Pic... 178 3e-43
gi|14601124|ref|NP_147652.1| nucleolar protein [Aeropyrum pernix... 173 7e-42
gi|13541183|ref|NP_110871.1| Pseudouridine synthase (dyskerin-re... 172 2e-41
gi|15790662|ref|NP_280486.1| tRNA-pseudouridine synthase; Sus [H... 168 2e-40
gi|15920607|ref|NP_376276.1| 237aa long hypothetical centromere/... 167 4e-40
gi|48852499|ref|ZP_00306685.1| COG0130: Pseudouridine synthase [... 165 2e-39
gi|37154785|sp|Q9HIT4|TRUB_THEAC Probable tRNA pseudouridine syn... 164 6e-39
gi|16082248|ref|NP_394700.1| dyskerin (nucleolar protein Nap57) ... 160 6e-38
gi|47157052|gb|AAT12405.1| centromere/microtubule binding protei... 158 3e-37
gi|38107011|gb|EAA53241.1| hypothetical protein MG07518.4 [Magna... 139 1e-31
gi|46113834|ref|ZP_00183605.2| COG0130: Pseudouridine synthase [... 106 1e-21
gi|48869687|ref|ZP_00322432.1| COG0130: Pseudouridine synthase [... 103 1e-20
gi|16803368|ref|NP_464853.1| highly similar to tRNA pseudouridin... 100 1e-19
gi|47095913|ref|ZP_00233516.1| tRNA pseudouridine synthase B [Li... 100 1e-19
gi|16800433|ref|NP_470701.1| highly similar to tRNA pseudouridin... 99 3e-19
gi|46907554|ref|YP_013943.1| tRNA pseudouridine synthase B [List... 98 4e-19
gi|47094121|ref|ZP_00231844.1| tRNA pseudouridine synthase B [Li... 98 4e-19
gi|28378665|ref|NP_785557.1| pseudouridylate synthase [Lactobaci... 98 4e-19
gi|23466719|ref|ZP_00122306.1| COG0130: Pseudouridine synthase [... 97 9e-19
gi|16273203|ref|NP_439441.1| tRNA pseudouridine 55 synthase [Hae... 97 9e-19
gi|48854842|ref|ZP_00309003.1| COG0130: Pseudouridine synthase [... 97 1e-18
gi|32033694|ref|ZP_00133989.1| COG0130: Pseudouridine synthase [... 97 1e-18
gi|33152521|ref|NP_873874.1| tRNA pseudouridine synthase B [Haem... 96 3e-18
gi|46133542|ref|ZP_00157355.2| COG0130: Pseudouridine synthase [... 96 3e-18
gi|48867925|ref|ZP_00321339.1| COG0130: Pseudouridine synthase [... 95 3e-18
gi|23113754|ref|ZP_00099104.1| COG0130: Pseudouridine synthase [... 94 7e-18
gi|15827813|ref|NP_302076.1| tRNA pseudouridine 55 synthase [Myc... 94 1e-17
gi|23023569|ref|ZP_00062803.1| COG0130: Pseudouridine synthase [... 93 1e-17
gi|15643619|ref|NP_228665.1| tRNA pseudouridine 55 synthase [The... 93 1e-17
gi|15602621|ref|NP_245693.1| TruB [Pasteurella multocida Pm70] >... 93 1e-17
gi|47575469|ref|ZP_00245504.1| COG0130: Pseudouridine synthase [... 92 2e-17
gi|37528346|ref|NP_931691.1| tRNA pseudouridine synthase B (tRNA... 92 3e-17
gi|28210964|ref|NP_781908.1| tRNA pseudouridine synthase B [Clos... 92 3e-17
gi|50842956|ref|YP_056183.1| tRNA pseudouridine synthase B [Prop... 92 4e-17
gi|50877499|emb|CAG37339.1| probable tRNA pseudouridine synthase... 92 4e-17
gi|46129747|ref|ZP_00164073.2| COG0130: Pseudouridine synthase [... 92 4e-17
gi|15606105|ref|NP_213482.1| tRNA pseudouridine 55 synthase [Aqu... 90 1e-16
gi|15241405|ref|NP_196950.1| pseudouridylate synthase TruB famil... 90 1e-16
gi|23099056|ref|NP_692522.1| tRNA-pseudouridine 5S synthase [Oce... 90 1e-16
gi|46310831|ref|ZP_00211449.1| COG0130: Pseudouridine synthase [... 90 1e-16
gi|28899228|ref|NP_798833.1| tRNA pseudouridine 55 synthase [Vib... 90 1e-16
gi|37088867|sp|Q8FPB3|TRUB_COREF tRNA pseudouridine synthase B (... 89 2e-16
gi|25028428|ref|NP_738482.1| putative tRNA pseudouridine synthas... 89 2e-16
gi|14719313|gb|AAK73131.1| putative tRNA synthase [Oryza sativa] 89 2e-16
gi|16078729|ref|NP_389548.1| tRNA pseudouridine 55 synthase [Bac... 89 2e-16
gi|29829090|ref|NP_823724.1| putative tRNA pseudouridine synthas... 89 3e-16
gi|46318661|ref|ZP_00219099.1| COG0130: Pseudouridine synthase [... 89 3e-16
gi|27904828|ref|NP_777954.1| tRNA pseudouridine synthase B [Buch... 88 5e-16
gi|46106243|ref|ZP_00199888.1| COG0130: Pseudouridine synthase [... 88 5e-16
gi|31195023|ref|XP_306459.1| ENSANGP00000001690 [Anopheles gambi... 87 7e-16
gi|46308432|ref|ZP_00210625.1| COG0130: Pseudouridine synthase [... 87 7e-16
gi|21401793|ref|NP_657778.1| TruB_N, TruB family pseudouridylate... 87 7e-16
gi|48769506|ref|ZP_00273851.1| COG0130: Pseudouridine synthase [... 87 9e-16
gi|33863689|ref|NP_895249.1| Putative tRNA pseudouridine synthas... 87 1e-15
gi|27365059|ref|NP_760587.1| Pseudouridine synthase [Vibrio vuln... 87 1e-15
gi|46912240|emb|CAG19035.1| putative tRNA pseudouridine 5S synth... 87 1e-15
gi|48788274|ref|ZP_00284253.1| COG0130: Pseudouridine synthase [... 86 2e-15
gi|15599936|ref|NP_253430.1| tRNA pseudouridine 55 synthase [Pse... 86 2e-15
gi|33596485|ref|NP_884128.1| tRNA pseudouridine synthase B [Bord... 86 2e-15
gi|37088881|sp|Q8GB99|TRUB_HELMO tRNA pseudouridine synthase B (... 86 2e-15
gi|50119661|ref|YP_048828.1| tRNA pseudouridine synthase B [Erwi... 86 2e-15
gi|15901075|ref|NP_345679.1| tRNA pseudouridine synthase B [Stre... 86 2e-15
gi|33865080|ref|NP_896639.1| putative tRNA pseudouridine 55 synt... 86 2e-15
gi|15640665|ref|NP_230294.1| tRNA pseudouridine 55 synthase [Vib... 86 2e-15
gi|48861810|ref|ZP_00315709.1| COG0130: Pseudouridine synthase [... 86 3e-15
gi|33592377|ref|NP_880021.1| tRNA pseudouridine synthase B [Bord... 86 3e-15
gi|45915189|ref|ZP_00193745.2| COG0130: Pseudouridine synthase [... 85 3e-15
gi|49235192|ref|ZP_00329264.1| COG0130: Pseudouridine synthase [... 85 3e-15
gi|47569087|ref|ZP_00239776.1| tRNA pseudouridine synthase B [Ba... 85 3e-15
gi|49478389|ref|YP_037871.1| tRNA pseudouridine synthase B [Baci... 85 3e-15
gi|48845558|ref|ZP_00299835.1| COG0130: Pseudouridine synthase [... 85 4e-15
gi|15616980|ref|NP_240193.1| tRNA pseudouridine 55 synthase [Buc... 85 4e-15
gi|42782898|ref|NP_980145.1| tRNA pseudouridine synthase B [Baci... 85 4e-15
gi|15677239|ref|NP_274392.1| tRNA pseudouridine synthase B [Neis... 84 6e-15
gi|38234052|ref|NP_939819.1| tRNA pseudouridine synthase B [Cory... 84 6e-15
gi|15903135|ref|NP_358685.1| tRNA pseudouridine 5S synthase [Str... 84 6e-15
gi|48858140|ref|ZP_00312104.1| COG0130: Pseudouridine synthase [... 84 8e-15
gi|15895081|ref|NP_348430.1| Pseudouridine synthase [Clostridium... 84 8e-15
gi|15614973|ref|NP_243276.1| tRNA pseudouridine 5S synthase [Bac... 84 1e-14
gi|15794481|ref|NP_284303.1| tRNA pseudouridine synthase B [Neis... 84 1e-14
gi|28195117|gb|AAO33771.1| putative tRNA pseudouridine synthase ... 84 1e-14
gi|16123640|ref|NP_406953.1| tRNA pseudouridine synthase B [Yers... 83 1e-14
gi|21224057|ref|NP_629836.1| probable tRNA pseudouridine synthas... 83 1e-14
gi|41408996|ref|NP_961832.1| TruB [Mycobacterium avium subsp. pa... 83 1e-14
gi|18158779|pdb|1K8W|A Chain A, Crystal Structure Of The E. Coli... 83 2e-14
gi|37088205|sp|Q812X9|TRUB_BACCR tRNA pseudouridine synthase B (... 83 2e-14
gi|50590669|ref|ZP_00332027.1| COG0130: Pseudouridine synthase [... 83 2e-14
gi|16762049|ref|NP_457666.1| tRNA pseudouridine 55 synthase (psi... 83 2e-14
gi|16766582|ref|NP_462197.1| tRNA pseudouridine 5S synthase [Sal... 83 2e-14
gi|16332274|ref|NP_443002.1| tRNA pseudouridine 55 synthase [Syn... 82 2e-14
gi|39996691|ref|NP_952642.1| tRNA pseudouridine synthase B [Geob... 82 4e-14
gi|21672638|ref|NP_660705.1| tRNA pseudouridine synthase B [Buch... 81 5e-14
gi|15609930|ref|NP_217309.1| truB [Mycobacterium tuberculosis H3... 81 6e-14
gi|49473868|ref|YP_031910.1| tRNA pseudouridine synthase B [Bart... 81 6e-14
gi|22537158|ref|NP_688009.1| tRNA pseudouridine synthase B [Stre... 81 6e-14
gi|46015795|pdb|1SGV|A Chain A, Structure Of Trna Psi55 Pseudour... 81 6e-14
gi|48836536|ref|ZP_00293532.1| COG0130: Pseudouridine synthase [... 81 6e-14
gi|13474631|ref|NP_106200.1| tRNA pseudouridine 55 synthase [Mes... 80 8e-14
gi|2462714|emb|CAA71695.1| yhbA [Yersinia enterocolitica] 80 8e-14
gi|3024763|sp|O34273|TRUB_YEREN tRNA pseudouridine synthase B (t... 80 8e-14
gi|18310665|ref|NP_562599.1| tRNA-pseudouridine synthase B [Clos... 80 8e-14
gi|49483434|ref|YP_040658.1| putative tRNA pseudouridine synthas... 80 8e-14
gi|17546010|ref|NP_519412.1| PROBABLE TRNA PSEUDOURIDINE SYNTHAS... 80 8e-14
gi|24114457|ref|NP_708967.1| tRNA pseudouridine 5S synthase [Shi... 80 8e-14
gi|15803708|ref|NP_289742.1| tRNA pseudouridine 5S synthase [Esc... 80 8e-14
gi|15887439|ref|NP_353120.1| AGR_C_127p [Agrobacterium tumefacie... 80 1e-13
gi|15924261|ref|NP_371795.1| tRNA pseudouridine 5S synthase [Sta... 80 1e-13
gi|49475025|ref|YP_033066.1| tRNA pseudouridine synthase B [Bart... 80 1e-13
gi|50086292|ref|YP_047802.1| tRNA pseudouridine 55 synthase [Aci... 80 1e-13
gi|49486110|ref|YP_043331.1| putative tRNA pseudouridine synthas... 80 1e-13
gi|21282883|ref|NP_645971.1| tRNA pseudouridine 5S synthase [Sta... 80 1e-13
gi|15675211|ref|NP_269385.1| putative tRNA pseudouridine 55 synt... 80 1e-13
gi|24379575|ref|NP_721530.1| putative tRNA pseudouridine 5S synt... 79 2e-13
gi|45521587|ref|ZP_00173106.1| COG0130: Pseudouridine synthase [... 79 2e-13
gi|28895999|ref|NP_802349.1| putative tRNA pseudouridine 55 synt... 79 2e-13
gi|34496919|ref|NP_901134.1| tRNA pseudouridine 55 synthase [Chr... 79 2e-13
gi|22299149|ref|NP_682396.1| tRNA pseudouridine synthase B [Ther... 79 3e-13
gi|39933511|ref|NP_945787.1| putative tRNA pseudouridine 55 synt... 79 3e-13
gi|15963994|ref|NP_384347.1| PROBABLE TRNA PSEUDOURIDINE SYNTHAS... 78 4e-13
gi|606106|gb|AAA57969.1| P35 [Escherichia coli] 78 4e-13
gi|15673108|ref|NP_267282.1| tRNA pseudouridine synthase B [Lact... 78 4e-13
gi|15618239|ref|NP_224524.1| tRNA Pseudouridine Synthase [Chlamy... 78 4e-13
gi|23002906|ref|ZP_00046578.1| COG0130: Pseudouridine synthase [... 78 5e-13
gi|23470958|ref|ZP_00126290.1| COG0130: Pseudouridine synthase [... 78 5e-13
gi|48732410|ref|ZP_00266153.1| COG0130: Pseudouridine synthase [... 78 5e-13
gi|48824842|ref|ZP_00286172.1| COG0130: Pseudouridine synthase [... 77 7e-13
gi|15604813|ref|NP_219597.1| tRNA Pseudouridine Synthase [Chlamy... 77 9e-13
gi|37523259|ref|NP_926636.1| tRNA pseudouridine synthase B [Gloe... 77 9e-13
gi|42519357|ref|NP_965287.1| tRNA pseudouridine synthase B [Lact... 77 1e-12
gi|33240877|ref|NP_875819.1| Pseudouridine synthase [Prochloroco... 77 1e-12
gi|33519581|ref|NP_878413.1| tRNA pseudouridine 5S synthase [Can... 77 1e-12
gi|27467866|ref|NP_764503.1| tRNA pseudouridine 5S synthase [Sta... 77 1e-12
gi|46365342|ref|ZP_00227837.1| COG0130: Pseudouridine synthase [... 76 2e-12
gi|46446393|ref|YP_007758.1| probable tRNA pseudouridine synthas... 76 2e-12
gi|46134794|ref|ZP_00158664.2| COG0130: Pseudouridine synthase [... 76 2e-12
gi|21231942|ref|NP_637859.1| tRNA pseudouridine synthase B [Xant... 76 2e-12
gi|23127530|ref|ZP_00109397.1| COG0130: Pseudouridine synthase [... 76 2e-12
gi|48892545|ref|ZP_00325896.1| COG0130: Pseudouridine synthase [... 76 2e-12
gi|34762649|ref|ZP_00143641.1| tRNA pseudouridine synthase B [Fu... 75 3e-12
gi|17988246|ref|NP_540880.1| TRNA PSEUDOURIDINE SYNTHASE B [Bruc... 75 3e-12
gi|19553183|ref|NP_601185.1| pseudouridine synthase [Corynebacte... 75 4e-12
gi|27375892|ref|NP_767421.1| tRNA pseudouridine 55 synthase [Bra... 75 4e-12
gi|32490973|ref|NP_871227.1| truB [Wigglesworthia glossinidia en... 75 4e-12
gi|37088028|sp|P59876|TRUB_BRUSU tRNA pseudouridine synthase B (... 75 4e-12
gi|15892588|ref|NP_360302.1| tRNA pseudouridine 55 synthase [Ric... 75 5e-12
gi|21243414|ref|NP_642996.1| tRNA pseudouridine synthase B [Xant... 74 6e-12
gi|34580429|ref|ZP_00141909.1| tRNA pseudouridine 55 synthase [R... 74 8e-12
gi|13959599|sp|Q9PKU2|TRUB_CHLMU tRNA pseudouridine synthase B (... 74 8e-12
gi|23104770|ref|ZP_00091230.1| COG0130: Pseudouridine synthase [... 74 8e-12
gi|42560883|ref|NP_975334.1| tRNA pseudouridine synthase B [Myco... 74 8e-12
gi|46203345|ref|ZP_00051647.2| COG0130: Pseudouridine synthase [... 74 1e-11
gi|19703970|ref|NP_603532.1| tRNA pseudouridine synthase B [Fuso... 74 1e-11
gi|32474245|ref|NP_867239.1| tRNA pseudouridine synthase B [Pire... 74 1e-11
gi|42523056|ref|NP_968436.1| tRNA pseudouridine synthase B [Bdel... 74 1e-11
gi|46578920|ref|YP_009728.1| tRNA pseudouridine synthase B [Desu... 74 1e-11
gi|15836842|ref|NP_297530.1| tRNA pseudouridine synthase B [Xyle... 74 1e-11
gi|48865951|ref|ZP_00319809.1| COG0130: Pseudouridine synthase [... 73 1e-11
gi|22971190|ref|ZP_00018174.1| hypothetical protein [Chloroflexu... 73 1e-11
gi|39938723|ref|NP_950489.1| pseudouridine synthase [Onion yello... 73 2e-11
gi|20807837|ref|NP_623008.1| Pseudouridine synthase [Thermoanaer... 73 2e-11
gi|17229035|ref|NP_485583.1| tRNA pseudouridine synthase B [Nost... 72 2e-11
gi|22958217|ref|ZP_00005893.1| COG0130: Pseudouridine synthase [... 72 3e-11
gi|50749833|ref|XP_421776.1| PREDICTED: similar to TruB pseudour... 72 4e-11
gi|21910423|ref|NP_664691.1| putative tRNA pseudouridine 55 synt... 72 4e-11
gi|30248767|ref|NP_840837.1| tRNA pseudouridine synthase B [Nitr... 72 4e-11
gi|13959602|sp|Q9RB36|TRUB_CYTJO tRNA pseudouridine synthase B (... 72 4e-11
gi|46141575|ref|ZP_00146868.2| COG0130: Pseudouridine synthase [... 71 5e-11
gi|37088958|sp|Q8KIY0|TRUB_SYNP7 tRNA pseudouridine synthase B (... 71 5e-11
gi|46120124|ref|ZP_00179463.2| COG0130: Pseudouridine synthase [... 71 7e-11
gi|28198124|ref|NP_778438.1| tRNA pseudouridine synthase B [Xyle... 71 7e-11
gi|11278396|pir||T44263 tRNA-pseudouridine 55 synthase (EC 5.4.9... 70 9e-11
gi|46201050|ref|ZP_00055819.2| COG0130: Pseudouridine synthase [... 70 9e-11
gi|22997356|ref|ZP_00041589.1| COG0130: Pseudouridine synthase [... 70 9e-11
gi|22994196|ref|ZP_00038710.1| COG0130: Pseudouridine synthase [... 70 9e-11
gi|21312414|ref|NP_082391.1| RIKEN cDNA 2610009I02 [Mus musculus... 70 1e-10
gi|28572264|ref|NP_789044.1| tRNA pseudouridine synthase B [Trop... 69 2e-10
gi|28493054|ref|NP_787215.1| tRNA pseudouridine synthase B [Trop... 69 2e-10
gi|30021899|ref|NP_833530.1| tRNA pseudouridine synthase B [Baci... 68 6e-10
gi|33861903|ref|NP_893464.1| Putative tRNA pseudouridine 55 synt... 67 7e-10
gi|16124292|ref|NP_418856.1| tRNA pseudouridine synthase B [Caul... 67 1e-09
gi|21040257|ref|NP_631908.1| TruB pseudouridine (psi) synthase h... 66 2e-09
gi|15595148|ref|NP_212937.1| tRNA pseudouridine 55 synthase (tru... 65 5e-09
gi|21673082|ref|NP_661147.1| tRNA pseudouridine synthase B [Chlo... 65 5e-09
gi|2467224|emb|CAA63512.1| hypothetical protein [Lactococcus lac... 65 5e-09
gi|26554377|ref|NP_758311.1| tRNA pseudouridine 5S synthase [Myc... 64 8e-09
gi|32449933|gb|AAH54088.1| 2610009I02Rik protein [Mus musculus] 64 1e-08
gi|31544323|ref|NP_852901.1| TruB [Mycoplasma gallisepticum R] >... 63 1e-08
gi|50365098|ref|YP_053523.1| tRNA pseudouridine 5S synthase [Mes... 63 2e-08
gi|15897326|ref|NP_341931.1| tRNA pseudouridine synthase subunit... 62 2e-08
gi|48766531|ref|ZP_00271081.1| COG0130: Pseudouridine synthase [... 62 4e-08
gi|15806341|ref|NP_295047.1| tRNA pseudouridine 55 synthase, put... 60 9e-08
gi|1850941|gb|AAB48163.1| Orp [Pseudomonas aeruginosa] 60 9e-08
gi|13811970|ref|NP_113099.1| putative pseudouridylate synthase [... 60 1e-07
gi|23943926|ref|NP_084115.1| RIKEN cDNA 2610009I02 [Mus musculus... 60 2e-07
gi|29348622|ref|NP_812125.1| tRNA pseudouridine synthase B [Bact... 59 2e-07
gi|14601123|ref|NP_147651.1| nucleolar protein [Aeropyrum pernix... 58 4e-07
gi|15920606|ref|NP_376275.1| 84aa long hypothetical centromere/m... 58 4e-07
gi|47459301|ref|YP_016163.1| tRNA pseudouridine synthase B [Myco... 58 4e-07
gi|2120153|pir||C57253 tRNA-pseudouridine synthase (EC 5.4.99.-)... 58 6e-07
gi|46200071|ref|YP_005738.1| tRNA pseudouridine 55 synthase [The... 58 6e-07
gi|49322|emb|CAA79237.1| ORF7 [Bacillus subtilis] 57 1e-06
gi|13357914|ref|NP_078188.1| tRNA pseudouridine 55 synthase [Ure... 57 1e-06
gi|48833183|ref|ZP_00290205.1| COG0130: Pseudouridine synthase [... 57 1e-06
gi|15792427|ref|NP_282250.1| tRNA pseudouridine synthase B [Camp... 56 2e-06
gi|15829021|ref|NP_326381.1| TRNA PSEUDOURIDINE SYNTHASE B (TRNA... 52 3e-05
gi|15604361|ref|NP_220877.1| TRNA PSEUDOURIDINE 55 SYNTHASE (tru... 51 5e-05
gi|46190431|ref|ZP_00121517.2| COG0130: Pseudouridine synthase [... 51 7e-05
gi|23466167|ref|NP_696770.1| tRNA pseudouridine synthase B [Bifi... 51 7e-05
gi|47087297|ref|NP_998654.1| zgc:63496 [Danio rerio] >gnl|BL_ORD... 49 2e-04
gi|48848430|ref|ZP_00302676.1| COG0130: Pseudouridine synthase [... 48 5e-04
gi|49083938|ref|XP_404209.1| hypothetical protein AN0072.2 [Aspe... 47 0.001
gi|48841002|ref|ZP_00297928.1| COG0175: 3'-phosphoadenosine 5'-p... 46 0.002
gi|48844904|ref|ZP_00299197.1| COG0130: Pseudouridine synthase [... 45 0.004
gi|50551583|ref|XP_503266.1| hypothetical protein [Yarrowia lipo... 45 0.004
gi|41720175|ref|ZP_00149014.1| COG0175: 3'-phosphoadenosine 5'-p... 45 0.004
gi|42453795|ref|ZP_00153702.1| hypothetical protein Rick066001 [... 44 0.009
gi|23507979|ref|NP_700649.1| tRNA pseudouridine synthase, putati... 44 0.009
gi|23490306|gb|EAA22116.1| TruB family pseudouridylate synthase,... 44 0.009
gi|34557271|ref|NP_907086.1| TRNA PSEUDOURIDINE SYNTHASE B [Woli... 44 0.011
gi|32265623|ref|NP_859655.1| tRNA pseudouridine synthase B [Heli... 43 0.015
gi|42526614|ref|NP_971712.1| tRNA pseudouridine synthase B [Trep... 43 0.015
gi|38104557|gb|EAA51104.1| hypothetical protein MG08626.4 [Magna... 43 0.019
gi|15639874|ref|NP_219324.1| tRNA pseudouridine 55 synthase (tru... 43 0.019
gi|20532240|sp|Q9SMH4|RAA2_CHLRE Trans-splicing factor Raa2, chl... 42 0.025
gi|20092679|ref|NP_618754.1| conserved hypothetical protein [Met... 41 0.057
gi|32405760|ref|XP_323493.1| related to pseudouridine synthase [... 41 0.057
gi|23473666|ref|ZP_00128962.1| COG0130: Pseudouridine synthase [... 41 0.074
gi|16082395|ref|NP_394877.1| conserved hypothetical protein [The... 40 0.16
gi|45190409|ref|NP_984663.1| AEL198Wp [Eremothecium gossypii] >g... 39 0.22
gi|21226985|ref|NP_632907.1| conserved protein [Methanosarcina m... 39 0.22
gi|19113192|ref|NP_596400.1| putative pseudouridine synthase [Sc... 39 0.28
gi|50294183|ref|XP_449503.1| unnamed protein product [Candida gl... 39 0.28
gi|6179671|emb|CAA18302.2| SPBC3B8.13c [Schizosaccharomyces pombe] 39 0.37
gi|6324583|ref|NP_014652.1| Tir4p [Saccharomyces cerevisiae] >gn... 39 0.37
gi|45658538|ref|YP_002624.1| tRNA pseudouridine synthase B [Lept... 38 0.48
gi|18977487|ref|NP_578844.1| hypothetical protein PF1115 [Pyroco... 38 0.48
gi|14590609|ref|NP_142677.1| hypothetical protein PH0734 [Pyroco... 38 0.63
gi|24663664|ref|NP_648627.1| CG11274-PA [Drosophila melanogaster... 38 0.63
gi|15668237|ref|NP_247030.1| sulfate adenylate transferase, subu... 38 0.63
gi|14521517|ref|NP_126993.1| hypothetical protein PAB1506 [Pyroc... 38 0.63
gi|49072771|ref|XP_400672.1| hypothetical protein UM03057.1 [Ust... 38 0.63
gi|50259048|gb|EAL21727.1| hypothetical protein CNBC5900 [Crypto... 38 0.63
gi|17507059|ref|NP_492945.1| RNA-binding region RNP-1 (1M119) [C... 37 0.82
gi|31873103|emb|CAD98731.1| Hypothetical protein F32B4.4b [Caeno... 37 0.82
gi|49094962|ref|XP_408942.1| hypothetical protein AN4805.2 [Aspe... 37 0.82
gi|42543416|pdb|1Q7H|A Chain A, Structure Of A Conserved Hypothe... 37 0.82
gi|50510937|dbj|BAD32454.1| mKIAA1461 protein [Mus musculus] 37 1.1
gi|6324037|ref|NP_014107.1| catalyzes formation of Psi55 (modifi... 37 1.1
gi|47086145|ref|NP_998112.1| hypothetical protein zgc:85700 [Dan... 37 1.4
gi|33863629|ref|NP_895189.1| conserved hypothetical protein [Pro... 37 1.4
gi|14521973|ref|NP_127450.1| proliferating-cell nucleolar antige... 37 1.4
gi|21226806|ref|NP_632728.1| conserved protein [Methanosarcina m... 37 1.4
gi|11498315|ref|NP_069542.1| conserved hypothetical protein [Arc... 36 1.8
gi|24213645|ref|NP_711126.1| tRNA pseudouridine synthase B [Lept... 36 1.8
gi|12053007|emb|CAB66679.1| hypothetical protein [Homo sapiens] 36 2.4
gi|34901890|ref|NP_912291.1| abnormal spindle-like protein [Oryz... 36 2.4
gi|21732311|emb|CAD38544.1| hypothetical protein [Homo sapiens] 36 2.4
gi|28571660|ref|NP_788641.1| CG31211-PB [Drosophila melanogaster... 36 2.4
gi|21356755|ref|NP_650131.1| CG31211-PA [Drosophila melanogaster... 36 2.4
gi|31982941|ref|NP_055885.2| KIAA0853 [Homo sapiens] >gnl|BL_ORD... 36 2.4
gi|15669623|ref|NP_248436.1| conserved hypothetical protein [Met... 36 2.4
gi|6323392|ref|NP_013464.1| involved in vacuolar protein targeti... 35 3.1
gi|46139391|ref|XP_391386.1| hypothetical protein FG11210.1 [Gib... 35 3.1
gi|50422527|ref|XP_459834.1| unnamed protein product [Debaryomyc... 35 3.1
gi|13542272|ref|NP_111960.1| Predicted RNA-binding protein (PUA ... 35 3.1
gi|47223384|emb|CAG04245.1| unnamed protein product [Tetraodon n... 35 4.1
gi|22268151|gb|AAH26944.1| Sfrs4 protein [Mus musculus] 35 4.1
gi|20978758|sp|Q8VE97|SFR4_MOUSE Splicing factor, arginine/serin... 35 4.1
gi|37182448|gb|AAQ89026.1| CCNL1 [Homo sapiens] 35 4.1
gi|10181126|ref|NP_065612.1| splicing factor, arginine/serine-ri... 35 4.1
gi|7582274|gb|AAF64257.1| BM-001 [Homo sapiens] 35 4.1
gi|9945320|ref|NP_064703.1| cyclin L1; cyclin L ania-6a [Homo sa... 35 4.1
gi|45768720|gb|AAH67812.1| Cyclin L1 [Homo sapiens] 35 4.1
gi|45357618|ref|NP_987175.1| Conserved hypothetical Archael prot... 35 4.1
gi|47214877|emb|CAG01181.1| unnamed protein product [Tetraodon n... 35 4.1
gi|26449170|dbj|BAC36925.1| unnamed protein product [Mus musculus] 35 4.1
gi|3219786|sp|Q27450|CYP1_BRUMA Peptidylprolyl isomerase 1 (Pept... 35 5.3
gi|29376268|ref|NP_815422.1| carbamoyl-phosphate synthase, large... 35 5.3
gi|19173675|ref|NP_597478.1| PSEUDOURIDINE SYNTHASE B [Encephali... 35 5.3
gi|16185660|gb|AAL13944.1| LD45348p [Drosophila melanogaster] 34 6.9
gi|25012578|gb|AAN71389.1| RE38701p [Drosophila melanogaster] 34 6.9
gi|39595739|emb|CAE67242.1| Hypothetical protein CBG12682 [Caeno... 34 6.9
gi|24644365|ref|NP_730984.1| CG2179-PA [Drosophila melanogaster]... 34 6.9
gi|47218803|emb|CAG02788.1| unnamed protein product [Tetraodon n... 34 6.9
gi|21243593|ref|NP_643175.1| chemotaxis protein [Xanthomonas axo... 34 6.9
gi|46445015|gb|EAL04286.1| hypothetical protein CaO19.13359 [Can... 34 6.9
gi|24644367|ref|NP_649572.2| CG2179-PB [Drosophila melanogaster]... 34 6.9
gi|17137528|ref|NP_477347.1| CG4602-PA [Drosophila melanogaster]... 34 9.0
gi|7532408|gb|AAC32822.3| splicing factor SRp54 [Drosophila mela... 34 9.0
gi|48870482|ref|ZP_00323204.1| COG0773: UDP-N-acetylmuramate-ala... 34 9.0
gi|31560078|ref|NP_076154.2| hypothetical protein MNCb-0169 [Mus... 34 9.0
gi|50752542|ref|XP_422823.1| PREDICTED: similar to BM-011 protei... 34 9.0
gi|26376452|dbj|BAB28190.2| unnamed protein product [Mus musculus] 34 9.0
gi|38109660|gb|EAA55496.1| hypothetical protein MG09303.4 [Magna... 34 9.0
gi|23509131|ref|NP_701799.1| hypothetical protein [Plasmodium fa... 34 9.0
gi|7670376|dbj|BAA95040.1| unnamed protein product [Mus musculus] 34 9.0
gi|11498752|ref|NP_069981.1| conserved hypothetical protein [Arc... 34 9.0
>gi|17553978|ref|NP_499370.1| centromere microtubule binding protein
like (50.2 kD) (3L839) [Caenorhabditis elegans]
gi|3914150|sp|O17919|NO50_CAEEL Putative nucleolar protein K01G5.5
gi|7505086|pir||T23199 hypothetical protein K01G5.5 - Caenorhabditis
elegans
gi|3924791|emb|CAB07244.1| Hypothetical protein K01G5.5
[Caenorhabditis elegans]
Length = 445
Score = 824 bits (2129), Expect = 0.0
Identities = 407/407 (100%), Positives = 407/407 (100%)
Frame = +1
Query: 1 MGKKDKRSKLEGDDLAEAQQKGSFQLPSSNETAKLDASQWPLLLKNYDKLNVRTNHYTPH 180
MGKKDKRSKLEGDDLAEAQQKGSFQLPSSNETAKLDASQWPLLLKNYDKLNVRTNHYTPH
Sbjct: 1 MGKKDKRSKLEGDDLAEAQQKGSFQLPSSNETAKLDASQWPLLLKNYDKLNVRTNHYTPH 60
Query: 181 VEGVSPLKRDIKNYISSGFFNLDKPSNPSSHEVVSWIKRILRCEKTGHSGTLDPKVSGCL 360
VEGVSPLKRDIKNYISSGFFNLDKPSNPSSHEVVSWIKRILRCEKTGHSGTLDPKVSGCL
Sbjct: 61 VEGVSPLKRDIKNYISSGFFNLDKPSNPSSHEVVSWIKRILRCEKTGHSGTLDPKVSGCL 120
Query: 361 IVCIDRTTRLAKSQQGAGKEYICIFKLHEEVEDDRKVKQALEKLTGALFQRPPLISAVKR 540
IVCIDRTTRLAKSQQGAGKEYICIFKLHEEVEDDRKVKQALEKLTGALFQRPPLISAVKR
Sbjct: 121 IVCIDRTTRLAKSQQGAGKEYICIFKLHEEVEDDRKVKQALEKLTGALFQRPPLISAVKR 180
Query: 541 QLRIRTVYENKFIEYDPAQQMGIFNCICESGTYVRTICVHLGLILGCGGQMQELRRNRSG 720
QLRIRTVYENKFIEYDPAQQMGIFNCICESGTYVRTICVHLGLILGCGGQMQELRRNRSG
Sbjct: 181 QLRIRTVYENKFIEYDPAQQMGIFNCICESGTYVRTICVHLGLILGCGGQMQELRRNRSG 240
Query: 721 ICDENENMVTMHDVLDAQYLLDTQKDESYMRHIVRPLEALLTQHKRVVVKDSCINAICYG 900
ICDENENMVTMHDVLDAQYLLDTQKDESYMRHIVRPLEALLTQHKRVVVKDSCINAICYG
Sbjct: 241 ICDENENMVTMHDVLDAQYLLDTQKDESYMRHIVRPLEALLTQHKRVVVKDSCINAICYG 300
Query: 901 AKILIPGILRYDDDIEVGKEIVIMSTKGEAICIAIAQMNTSTIASVDHGVVAKSKRVIME 1080
AKILIPGILRYDDDIEVGKEIVIMSTKGEAICIAIAQMNTSTIASVDHGVVAKSKRVIME
Sbjct: 301 AKILIPGILRYDDDIEVGKEIVIMSTKGEAICIAIAQMNTSTIASVDHGVVAKSKRVIME 360
Query: 1081 RDVYGRKWGLGPVASKKKQMVKDGLLDKFGKPNDTTPKSWAKEYVQT 1221
RDVYGRKWGLGPVASKKKQMVKDGLLDKFGKPNDTTPKSWAKEYVQT
Sbjct: 361 RDVYGRKWGLGPVASKKKQMVKDGLLDKFGKPNDTTPKSWAKEYVQT 407
>gi|39591828|emb|CAE71406.1| Hypothetical protein CBG18316
[Caenorhabditis briggsae]
Length = 445
Score = 813 bits (2100), Expect = 0.0
Identities = 399/407 (98%), Positives = 406/407 (99%)
Frame = +1
Query: 1 MGKKDKRSKLEGDDLAEAQQKGSFQLPSSNETAKLDASQWPLLLKNYDKLNVRTNHYTPH 180
MGKKDKRSKLEGD+LAEAQQKGSFQLPSSNETAKLDASQWPLLLKNYDKLNVRTNHYTPH
Sbjct: 1 MGKKDKRSKLEGDELAEAQQKGSFQLPSSNETAKLDASQWPLLLKNYDKLNVRTNHYTPH 60
Query: 181 VEGVSPLKRDIKNYISSGFFNLDKPSNPSSHEVVSWIKRILRCEKTGHSGTLDPKVSGCL 360
VEGVSPLKRDIKNYISSGFFNLDKPSNPSSHEVVSWIKRILRCEKTGHSGTLDPKVSGCL
Sbjct: 61 VEGVSPLKRDIKNYISSGFFNLDKPSNPSSHEVVSWIKRILRCEKTGHSGTLDPKVSGCL 120
Query: 361 IVCIDRTTRLAKSQQGAGKEYICIFKLHEEVEDDRKVKQALEKLTGALFQRPPLISAVKR 540
IVCIDRTTRLAKSQQGAGKEYICIFKLHEEVED+RKVKQALEKLTGALFQRPPLISAVKR
Sbjct: 121 IVCIDRTTRLAKSQQGAGKEYICIFKLHEEVEDERKVKQALEKLTGALFQRPPLISAVKR 180
Query: 541 QLRIRTVYENKFIEYDPAQQMGIFNCICESGTYVRTICVHLGLILGCGGQMQELRRNRSG 720
QLRIRTVYENKFIEYDPAQQMGIFNCICESGTYVRTICVHLGLILGCGGQMQELRRNRSG
Sbjct: 181 QLRIRTVYENKFIEYDPAQQMGIFNCICESGTYVRTICVHLGLILGCGGQMQELRRNRSG 240
Query: 721 ICDENENMVTMHDVLDAQYLLDTQKDESYMRHIVRPLEALLTQHKRVVVKDSCINAICYG 900
ICDENENMVTMHDVLDAQY+LDTQKDESYMRHIVRPLEALLTQHKRVVVKDSC+NAICYG
Sbjct: 241 ICDENENMVTMHDVLDAQYMLDTQKDESYMRHIVRPLEALLTQHKRVVVKDSCVNAICYG 300
Query: 901 AKILIPGILRYDDDIEVGKEIVIMSTKGEAICIAIAQMNTSTIASVDHGVVAKSKRVIME 1080
AKILIPGILRYDDDIEVGKEIVIM+TKGEAICIAIAQM+TSTIASVDHG+VAKSKRVIME
Sbjct: 301 AKILIPGILRYDDDIEVGKEIVIMTTKGEAICIAIAQMSTSTIASVDHGIVAKSKRVIME 360
Query: 1081 RDVYGRKWGLGPVASKKKQMVKDGLLDKFGKPNDTTPKSWAKEYVQT 1221
RDVYGRKWGLGPVASKKKQMVKDGLLDKFGKPN TTPKSWAKEYVQT
Sbjct: 361 RDVYGRKWGLGPVASKKKQMVKDGLLDKFGKPNITTPKSWAKEYVQT 407