Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= K06A5_4
         (999 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17508095|ref|NP_491861.1| putative protein family member, wit...   593   e-168
gi|39595696|emb|CAE67199.1| Hypothetical protein CBG12635 [Caeno...   429   e-119
gi|39593094|emb|CAE64563.1| Hypothetical protein CBG09313 [Caeno...   108   2e-22
gi|17555648|ref|NP_499671.1| predicted CDS, putative protein fam...   106   7e-22
gi|17509517|ref|NP_491044.1| putative protein family member, wit...   104   3e-21
gi|17509519|ref|NP_491045.1| predicted CDS, a likely pseudogene ...   104   4e-21
gi|17544056|ref|NP_502038.1| putative protein family member, wit...   103   6e-21
gi|17564344|ref|NP_506519.1| putative protein family member, wit...   103   6e-21
gi|7508898|pir||T32940 hypothetical protein W03D8.9 - Caenorhabd...   102   2e-20
gi|17534489|ref|NP_494955.1| putative protein family member, wit...    62   2e-08
gi|39596793|emb|CAE59020.1| Hypothetical protein CBG02297 [Caeno...    50   8e-05
gi|17531703|ref|NP_493755.1| endoplasmic reticulum membrane prot...    44   0.008
gi|46113025|ref|ZP_00182174.2| COG0531: Amino acid transporters ...    41   0.037
gi|47846208|emb|CAF25006.1| putative ABC transporter protein [La...    41   0.049
gi|1364136|pir||S57913 probable translocation protein sppT, ATP-...    40   0.064
gi|23308882|ref|NP_601223.2| ABC-type transporter, permease comp...    40   0.11
gi|15281380|gb|AAK94189.1| NADH dehydrogenase subunit 2 [Gymnobe...    39   0.14
gi|49236123|ref|ZP_00330185.1| COG0477: Permeases of the major f...    39   0.14
gi|15601946|ref|NP_245018.1| unknown [Pasteurella multocida Pm70...    39   0.24
gi|27762178|gb|AAN84582.1| NADH dehydrogenase subunit 2 [Civetti...    33   0.34
gi|1363368|pir||I56273 ATP-dependent transport protein SapT - La...    38   0.41
gi|27762192|gb|AAN84589.1| NADH dehydrogenase subunit 2 [Viverra...    32   0.43
gi|18310149|ref|NP_562083.1| probable glutamate/ aspartate trans...    37   0.71
gi|48788657|ref|ZP_00284636.1| COG2244: Membrane protein involve...    37   0.71
gi|27762194|gb|AAN84590.1| NADH dehydrogenase subunit 2 [Paradox...    32   0.72
gi|48823980|ref|ZP_00285427.1| COG2898: Uncharacterized conserve...    36   1.2
gi|18071184|ref|NP_542219.1| ABC transporter [Lactobacillus case...    36   1.6
gi|46916458|emb|CAG23223.1| hypothetical Na+/H+-dicarboxylate sy...    36   1.6
gi|45267862|gb|AAS55761.1| putative inorganic diphosphatase (EC ...    36   1.6
gi|27762158|gb|AAN84572.1| NADH dehydrogenase subunit 2 [Galidia...    29   2.0
gi|46323583|ref|ZP_00223947.1| COG1426: Uncharacterized protein ...    35   2.1
gi|23100561|ref|NP_694028.1| NADH dehydrogenase [Oceanobacillus ...    35   2.1
gi|17564346|ref|NP_506231.1| prion-like Q/N-rich domain protein ...    35   2.7
gi|23482967|gb|EAA18790.1| hypothetical protein [Plasmodium yoel...    35   2.7
gi|23477250|gb|AAN34620.1| NADH dehydrogenase subunit 2 [Cercart...    35   2.7
gi|34860378|ref|XP_235886.2| similar to ovarian cancer related t...    35   2.7
gi|38707586|ref|NP_944725.1| NADH dehydrogenase subunit 2 [Ponto...    30   3.3
gi|46128851|ref|ZP_00154363.2| COG2704: Anaerobic C4-dicarboxyla...    35   3.5
gi|19553345|ref|NP_601347.1| permease of the drug/metabolite tra...    35   3.5
gi|29840256|ref|NP_829362.1| magnesium transporter [Chlamydophil...    35   3.5
gi|48788547|ref|ZP_00284526.1| COG3333: Uncharacterized protein ...    35   3.5
gi|27762198|gb|AAN84592.1| NADH dehydrogenase subunit 2 [Genetta...    30   4.2
gi|27762160|gb|AAN84573.1| NADH dehydrogenase subunit 2 [Galidia...    28   4.2
gi|47076940|dbj|BAD18408.1| unnamed protein product [Homo sapiens]     34   4.6
gi|23100395|ref|NP_693862.1| acriflavine resistance protein [Oce...    34   4.6
gi|16877105|gb|AAH16826.1| HSH2D protein [Homo sapiens]                34   4.6
gi|47568564|ref|ZP_00239263.1| osmoprotectant transporter, BCCT ...    34   4.6
gi|16122763|ref|NP_406076.1| NADH dehydrogenase I chain L [Yersi...    34   4.6
gi|45442145|ref|NP_993684.1| NADH dehydrogenase I chain L [Yersi...    34   4.6
gi|29833029|ref|NP_827663.1| hypothetical protein SAV6487 [Strep...    34   4.6
gi|14249584|ref|NP_116244.1| hematopoietic SH2 domain containing...    34   4.6
gi|49077846|ref|XP_402737.1| hypothetical protein UM05122.1 [Ust...    34   4.6
gi|27762148|gb|AAN84567.1| NADH dehydrogenase subunit 2 [Mungoti...    30   5.4
gi|21542492|ref|NP_660141.1| NADH dehydrogenase subunit 2 [Odobe...    30   5.4
gi|13541816|ref|NP_111504.1| Predicted transporter [Thermoplasma...    34   6.0
gi|21536218|ref|NP_079696.1| small proline rich-like 10 [Mus mus...    34   6.0
gi|47219248|emb|CAG11710.1| unnamed protein product [Tetraodon n...    34   6.0
gi|48855008|ref|ZP_00309168.1| COG2610: H+/gluconate symporter a...    34   6.0
gi|27762154|gb|AAN84570.1| NADH dehydrogenase subunit 2 [Cryptop...    28   7.0
gi|16263860|ref|NP_436652.1| hypothetical  protein [Sinorhizobiu...    33   7.8
gi|13488131|ref|NP_085780.1| hypothetical protein mll9238 [Mesor...    33   7.8
gi|37522866|ref|NP_926243.1| hypothetical protein glr3297 [Gloeo...    33   7.8
gi|13473848|ref|NP_105416.1| putative integral membrane protein ...    33   7.8
gi|46113712|ref|ZP_00200872.1| COG4760: Predicted membrane prote...    33   7.8
gi|19553895|ref|NP_601897.1| spermidine synthase [Corynebacteriu...    33   7.8
gi|27762156|gb|AAN84571.1| NADH dehydrogenase subunit 2 [Fossa f...    33   7.8
gi|15077450|gb|AAK83177.1| putative transporter [Streptomyces vi...    33   7.8


>gi|17508095|ref|NP_491861.1| putative protein family member, with
           at least 6 transmembrane domains (34.7 kD) (1H45)
           [Caenorhabditis elegans]
 gi|7505351|pir||T15090 hypothetical protein K06A5.2 -
           Caenorhabditis elegans
 gi|13384500|gb|AAK21430.1| Hypothetical protein K06A5.2
           [Caenorhabditis elegans]
          Length = 332

 Score =  593 bits (1528), Expect = e-168
 Identities = 316/332 (95%), Positives = 316/332 (95%)
 Frame = +1

Query: 1   MTMSDPAVTPQQEGPAADPALLANAGCVALATEAGIDIAIATMQQFGRELEQLPERGRRL 180
           MTMSDPAVTPQQEGPAADPALLANAGCVALATEAGIDIAIATMQQFGRELEQLPERGRRL
Sbjct: 1   MTMSDPAVTPQQEGPAADPALLANAGCVALATEAGIDIAIATMQQFGRELEQLPERGRRL 60

Query: 181 AEQAMSSISTVNHXXXXXXXXXXXXXXXXGVEEDSFVRIVNTLVDLSPRQISSKPIIETF 360
           AEQAMSSISTVNH                GVEEDSFVRIVNTLVDLSPRQISSKPIIETF
Sbjct: 61  AEQAMSSISTVNHRSKRSSVSQRSSKSNSGVEEDSFVRIVNTLVDLSPRQISSKPIIETF 120

Query: 361 VLSSVILTVFSLSSLLGGYILAPFISFLIPPVGAAIFSGLVAPLAIYYQLSTGYGPLNGF 540
           VLSSVILTVFSLSSLLGGYILAPFISFLIPPVGAAIFSGLVAPLAIYYQLSTGYGPLNGF
Sbjct: 121 VLSSVILTVFSLSSLLGGYILAPFISFLIPPVGAAIFSGLVAPLAIYYQLSTGYGPLNGF 180

Query: 541 RLLVIATTVQGVLTGSALSHVLISAEPFVALSTIASSFIIAVMNPTSRASSLSTTVATSI 720
           RLLVIATTVQGVLTGSALSHVLISAEPFVALSTIASSFIIAVMNPTSRASSLSTTVATSI
Sbjct: 181 RLLVIATTVQGVLTGSALSHVLISAEPFVALSTIASSFIIAVMNPTSRASSLSTTVATSI 240

Query: 721 LIHSTLGAVEGALTPVYFVLTGFYTLAALIPIQLASRDQSRANVNLYSAILVGLTISAKC 900
           LIHSTLGAVEGALTPVYFVLTGFYTLAALIPIQLASRDQSRANVNLYSAILVGLTISAKC
Sbjct: 241 LIHSTLGAVEGALTPVYFVLTGFYTLAALIPIQLASRDQSRANVNLYSAILVGLTISAKC 300

Query: 901 LVYGVLGAYDVPISASEEQFGLEGNAEINVNA 996
           LVYGVLGAYDVPISASEEQFGLEGNAEINVNA
Sbjct: 301 LVYGVLGAYDVPISASEEQFGLEGNAEINVNA 332




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