Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= K07F5_6
         (213 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17541244|ref|NP_501763.1| putative protein (7.0 kD) (4K609) [...    39   0.039
gi|17511091|ref|NP_491759.1| putative protein (1G674) [Caenorhab...    38   0.051
gi|39591541|emb|CAE71117.1| Hypothetical protein CBG17970 [Caeno...    37   0.11
gi|17543388|ref|NP_501882.1| putative protein (4L34) [Caenorhabd...    37   0.11
gi|39580417|emb|CAE70977.1| Hypothetical protein CBG17794 [Caeno...    36   0.19
gi|39591390|emb|CAE73444.1| Hypothetical protein CBG20892 [Caeno...    36   0.25
gi|17553178|ref|NP_498000.1| putative protein (3F920) [Caenorhab...    35   0.33
gi|17509817|ref|NP_490996.1| putative protein (1D112) [Caenorhab...    35   0.56
gi|17533111|ref|NP_494875.1| putative protein (7.1 kD) (2F150) [...    34   0.74
gi|17538744|ref|NP_500730.1| putative protein (7.0 kD) (4F928) [...    34   0.74
gi|39584108|emb|CAE61483.1| Hypothetical protein CBG05377 [Caeno...    34   0.74
gi|46103918|ref|XP_380286.1| hypothetical protein FG00110.1 [Gib...    33   1.6
gi|38076498|ref|XP_124054.2| similar to splicing factor, arginin...    32   3.7
gi|32565427|ref|NP_871892.1| predicted CDS, putative protein (1L...    32   4.8
gi|15241492|ref|NP_196982.1| formate dehydrogenase (FDH) [Arabid...    32   4.8
gi|46105322|ref|XP_380465.1| hypothetical protein FG00289.1 [Gib...    31   6.2
gi|47228043|emb|CAF97672.1| unnamed protein product [Tetraodon n...    31   6.2
gi|48846446|ref|ZP_00300709.1| COG0437: Fe-S-cluster-containing ...    31   6.2
gi|50761755|ref|XP_430494.1| PREDICTED: hypothetical protein XP_...    31   8.1
gi|34868553|ref|XP_345542.1| similar to Ubiquitin carboxyl-termi...    31   8.1
gi|50591790|ref|ZP_00333093.1| COG4720: Predicted membrane prote...    31   8.1


>gi|17541244|ref|NP_501763.1| putative protein (7.0 kD) (4K609)
           [Caenorhabditis elegans]
 gi|7505470|pir||T23415 hypothetical protein K07F5.5 -
           Caenorhabditis elegans
 gi|3878312|emb|CAA94279.1| Hypothetical protein K07F5.5
           [Caenorhabditis elegans]
          Length = 70

 Score = 38.5 bits (88), Expect = 0.039
 Identities = 23/70 (32%), Positives = 23/70 (32%)
 Frame = +1

Query: 1   MADKXXXXXXXXXXXXXXXXXXXXXXXXREDYAXXXXXXXXXXXXXXXXXXXXXXXVFKA 180
           MADK                        REDYA                       VFKA
Sbjct: 1   MADKSAYMGAGGYGSGYMGSNASSSGYAREDYAQGGNGGGQQQNQGSGGNTNPGGQVFKA 60

Query: 181 RTDQSCYLGP 210
           RTDQSCYLGP
Sbjct: 61  RTDQSCYLGP 70




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