Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= M01E5_4
         (1677 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17508315|ref|NP_493335.1| putative protein, with a coiled coi...   851   0.0
gi|39582937|emb|CAE73002.1| Hypothetical protein CBG20351 [Caeno...   474   e-132
gi|40216002|gb|AAL39327.2| GH22839p [Drosophila melanogaster]          34   9.3
gi|7503939|pir||T16420 hypothetical protein F52C9.8b - Caenorhab...    34   9.3
gi|25148599|ref|NP_498135.2| Poly-Q toxicity Enhancer PQE-1, exo...    34   9.3
gi|25148593|ref|NP_498137.2| Poly-Q toxicity Enhancer PQE-1, put...    34   9.3
gi|10717161|gb|AAG22045.1| KH domain containing RNA-binding prot...    34   9.3
gi|24645595|ref|NP_731443.1| CG6203-PC [Drosophila melanogaster]...    34   9.3
gi|24645600|ref|NP_731445.1| CG6203-PE [Drosophila melanogaster]...    34   9.3
gi|19922726|ref|NP_611645.1| CG6203-PA [Drosophila melanogaster]...    34   9.3
gi|17932854|emb|CAD19443.1| fragile X related [Drosophila melano...    34   9.3
gi|7503938|pir||T16419 hypothetical protein F52C9.8a - Caenorhab...    34   9.3


>gi|17508315|ref|NP_493335.1| putative protein, with a coiled coil-4
            domain (1N874) [Caenorhabditis elegans]
 gi|7505884|pir||T23649 hypothetical protein M01E5.3 - Caenorhabditis
            elegans
 gi|3878633|emb|CAB07641.1| Hypothetical protein M01E5.3
            [Caenorhabditis elegans]
          Length = 558

 Score =  851 bits (2199), Expect = 0.0
 Identities = 446/558 (79%), Positives = 446/558 (79%)
 Frame = -1

Query: 1677 MTMVKTLVALATERMLLKTSGPTFLRGIEFMYAAGLAPDRLSVMMTSSHKYVLQFHSKCD 1498
            MTMVKTLVALATERMLLKTSGPTFLRGIEFMYAAGLAPDRLSVMMTSSHKYVLQFHSKCD
Sbjct: 1    MTMVKTLVALATERMLLKTSGPTFLRGIEFMYAAGLAPDRLSVMMTSSHKYVLQFHSKCD 60

Query: 1497 IRPFAANYPNFGRVLRGIVHVREWRIKSIEFVNVAFYMRDVDNLERAIEKLGVELVLLRN 1318
            IRPFAANYPNFGRVLRGIVHVREWRIKSIEFVNVAFYMRDVDNLERAIEKLGVELVLLRN
Sbjct: 61   IRPFAANYPNFGRVLRGIVHVREWRIKSIEFVNVAFYMRDVDNLERAIEKLGVELVLLRN 120

Query: 1317 CTYPGVQRGDEAVKFLSALNRKKQAVVCEYGDDRLKHRIGRRSSGNRTRRASRNGQEIVX 1138
            CTYPGVQRGDEAVKFLSALNRKKQAVVCEYGDDRLKHRIGRRSSGNRTRRASRNGQEIV
Sbjct: 121  CTYPGVQRGDEAVKFLSALNRKKQAVVCEYGDDRLKHRIGRRSSGNRTRRASRNGQEIVN 180

Query: 1137 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGIRRPIPLNPDQARHIIPQLL 958
                                                  PGIRRPIPLNPDQARHIIPQLL
Sbjct: 181  PAIAPGAAAAAQPALEAAPAAPAAGAAAPEANAPQAAPPGIRRPIPLNPDQARHIIPQLL 240

Query: 957  NPGGAQPAPVQDGPVRGPPGIINQGRVVVGAHVYEFRAADVPNADGVPAXXXXXXXXXXX 778
            NPGGAQPAPVQDGPVRGPPGIINQGRVVVGAHVYEFRAADVPNADGVPA
Sbjct: 241  NPGGAQPAPVQDGPVRGPPGIINQGRVVVGAHVYEFRAADVPNADGVPAVHNINHLLNVL 300

Query: 777  XXNAGNDVRVIVLPSRVGEGLPIHFNNNDLIFRHQSRXXXXXXXXXXXXXXXXXXXXXXX 598
              NAGNDVRVIVLPSRVGEGLPIHFNNNDLIFRHQSR
Sbjct: 301  NENAGNDVRVIVLPSRVGEGLPIHFNNNDLIFRHQSRPQPAPQQAAAAAAAGAAPAVAVG 360

Query: 597  AEPLPQPDDVQIAPIPADERQARYARVQARLGHMMNARMRXXXXXXXXXXXXXXXNLMVV 418
            AEPLPQPDDVQIAPIPADERQARYARVQARLGHMMNARMR               NLMVV
Sbjct: 361  AEPLPQPDDVQIAPIPADERQARYARVQARLGHMMNARMRQNQEDQQYYYDQQPPNLMVV 420

Query: 417  GTAHAHYRRHMNAQAHQQQREPSWNNYAVANAPPAIIQRNLDAPAPMFGVAVNEPQVQRN 238
            GTAHAHYRRHMNAQAHQQQREPSWNNYAVANAPPAIIQRNLDAPAPMFGVAVNEPQVQRN
Sbjct: 421  GTAHAHYRRHMNAQAHQQQREPSWNNYAVANAPPAIIQRNLDAPAPMFGVAVNEPQVQRN 480

Query: 237  GDDSNDSTDREEIYDAEQQRQEALRDLVADPEAQPNFAPVEAQAXXXXXXXXXXXXXXXX 58
            GDDSNDSTDREEIYDAEQQRQEALRDLVADPEAQPNFAPVEAQA
Sbjct: 481  GDDSNDSTDREEIYDAEQQRQEALRDLVADPEAQPNFAPVEAQAVDLDMLEEEGEDDEVM 540

Query: 57   XXXXXXGQFMMDGRAVME 4
                  GQFMMDGRAVME
Sbjct: 541  EVGGVDGQFMMDGRAVME 558




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