Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= M110_5
         (3471 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17535211|ref|NP_495729.1| initiation factor (129.3 kD) (2I511...  1675   0.0
gi|35210137|emb|CAE47470.1| Hypothetical protein M110.4b [Caenor...  1669   0.0
gi|39587235|emb|CAE57703.1| Hypothetical protein CBG00709 [Caeno...  1003   0.0
gi|39587237|emb|CAE57705.1| Hypothetical protein CBG00712 [Caeno...   415   e-114
gi|47209622|emb|CAF90414.1| unnamed protein product [Tetraodon n...   136   3e-30
gi|18411536|ref|NP_567095.1| MIF4G domain-containing protein / M...   135   5e-30
gi|11358898|pir||T49219 translation initiation factor eIF-4 gamm...   135   5e-30
gi|37360880|dbj|BAC98352.1| eukaryotic translation initiation fa...   135   5e-30
gi|8118607|gb|AAF73054.1| protein synthesis initiation factor 4G...   135   5e-30
gi|48121811|ref|XP_393239.1| similar to eukaryotic translation i...   135   5e-30
gi|47224816|emb|CAG06386.1| unnamed protein product [Tetraodon n...   134   2e-29
gi|29126896|gb|AAH47531.1| Eif4g3 protein [Mus musculus]              132   6e-29
gi|31206943|ref|XP_312438.1| ENSANGP00000021865 [Anopheles gambi...   132   6e-29
gi|48428375|sp|Q80XI3|I4G3_MOUSE Eukaryotic translation initiati...   132   6e-29
gi|50368570|gb|AAH75705.1| Eif4g3 protein [Mus musculus]              132   6e-29
gi|34872195|ref|XP_216563.2| similar to eukaryotic translation i...   132   6e-29
gi|31872023|gb|AAP59416.1| eukaryotic translation intiation fact...   132   6e-29
gi|23271675|gb|AAH23898.1| Eif4g3 protein [Mus musculus]              132   6e-29
gi|50838806|ref|NP_766291.2| eukaryotic translation initiation f...   132   6e-29
gi|50752373|ref|XP_422760.1| PREDICTED: similar to eukaryotic tr...   132   6e-29
gi|10092601|ref|NP_003751.2| eukaryotic translation initiation f...   132   8e-29
gi|38201621|ref|NP_886553.2| eukaryotic translation initiation f...   129   6e-28
gi|3941724|gb|AAC82471.1| eukaryotic protein synthesis initiatio...   129   6e-28
gi|41019505|sp|Q04637|I4G1_HUMAN Eukaryotic translation initiati...   129   6e-28
gi|38201625|ref|NP_937885.1| eukaryotic translation initiation f...   129   6e-28
gi|38201627|ref|NP_937887.1| eukaryotic translation initiation f...   129   6e-28
gi|38201619|ref|NP_004944.2| eukaryotic translation initiation f...   129   6e-28
gi|20892055|ref|XP_148153.1| similar to Eukaryotic-initiation-fa...   127   2e-27
gi|41946083|gb|AAH66103.1| Eif4g1 protein [Mus musculus]              127   2e-27
gi|39980478|gb|AAR32992.1| eukaryotic translation initiation fac...   127   2e-27
gi|41946089|gb|AAH66038.1| Eif4g1 protein [Mus musculus]              126   3e-27
gi|34855515|ref|XP_215538.2| similar to eukaryotic translation i...   126   3e-27
gi|34869741|ref|XP_213569.2| similar to eukaryotic translation i...   126   3e-27
gi|50508572|dbj|BAD30897.1| putative eukaryotic translation init...   126   4e-27
gi|45725021|emb|CAG23924.1| eukaryotic initiation factor 4G [Sph...   124   1e-26
gi|31221253|ref|XP_317024.1| ENSANGP00000019262 [Anopheles gambi...   123   4e-26
gi|7512011|pir||T09072 probable translation initiation factor eI...   119   5e-25
gi|24638730|ref|NP_524640.2| CG10811-PA [Drosophila melanogaster...   119   5e-25
gi|50777728|ref|XP_423296.1| PREDICTED: similar to eukaryotic tr...   117   1e-24
gi|50260585|gb|EAL23238.1| hypothetical protein CNBA3540 [Crypto...   114   1e-23
gi|46436009|gb|EAK95379.1| hypothetical protein CaO19.3599 [Cand...   112   6e-23
gi|13399859|pdb|1HU3|A Chain A, Middle Domain Of Human Eif4gii        110   2e-22
gi|50419159|ref|XP_458102.1| unnamed protein product [Debaryomyc...   108   9e-22
gi|46436065|gb|EAK95434.1| hypothetical protein CaO19.11082 [Can...   107   3e-21
gi|48096178|ref|XP_394628.1| similar to Eukaryotic translation i...   105   6e-21
gi|50260602|gb|EAL23255.1| hypothetical protein CNBA3710 [Crypto...   105   1e-20
gi|37590187|gb|AAH58950.1| Eif4g1 protein [Mus musculus]              105   1e-20
gi|951453|gb|AAA74724.1| initiation factor (iso)4f p82 subunit        102   6e-20
gi|47217300|emb|CAG12508.1| unnamed protein product [Tetraodon n...   102   8e-20
gi|1170504|sp|Q03387|IF41_WHEAT Eukaryotic initiation factor (is...   101   1e-19
gi|322867|pir||A44452 translation initiation factor eIF-4F isozy...   101   1e-19
gi|47230440|emb|CAF99633.1| unnamed protein product [Tetraodon n...   101   1e-19
gi|49522508|gb|AAH75569.1| Unknown (protein for MGC:89536) [Xeno...    98   2e-18
gi|47497611|dbj|BAD19680.1| putative eukaryotic initiation facto...    96   6e-18
gi|19115514|ref|NP_594602.1| putative eukaryotic translation ini...    96   6e-18
gi|31228503|ref|XP_318067.1| ENSANGP00000003468 [Anopheles gambi...    96   6e-18
gi|38110749|gb|EAA56425.1| hypothetical protein MG06396.4 [Magna...    96   8e-18
gi|49097474|ref|XP_410197.1| hypothetical protein AN6060.2 [Aspe...    95   1e-17
gi|49076060|ref|XP_402046.1| hypothetical protein UM04431.1 [Ust...    95   1e-17
gi|15224087|ref|NP_179983.1| MIF4G domain-containing protein / M...    95   1e-17
gi|17064836|gb|AAL32572.1| putative eukaryotic initiation factor...    95   1e-17
gi|29367393|gb|AAO72569.1| eukaryotic initiation factor-like pro...    95   1e-17
gi|38345024|emb|CAD41506.2| OSJNBa0029H02.8 [Oryza sativa (japon...    95   1e-17
gi|30315907|sp|P79398|I4G2_RABIT Eukaryotic translation initiati...    95   1e-17
gi|1903416|gb|AAC53095.1| translation repressor NAT1 [Mus musculus]    95   1e-17
gi|40675493|gb|AAH64810.1| Eif4g2 protein [Mus musculus]               94   2e-17
gi|46122089|ref|XP_385598.1| hypothetical protein FG05422.1 [Gib...    94   2e-17
gi|28175426|gb|AAH43034.1| Eif4g2 protein [Mus musculus]               94   2e-17
gi|3218320|emb|CAA61857.1| death associated protein 5 [Homo sapi...    94   2e-17
gi|30315913|sp|Q62448|I4G2_MOUSE Eukaryotic translation initiati...    94   2e-17
gi|4503539|ref|NP_001409.1| eukaryotic translation initiation fa...    94   2e-17
gi|34486094|ref|NP_038535.2| eukaryotic translation initiation f...    94   2e-17
gi|1903414|gb|AAC51166.1| translation repressor NAT1 [Homo sapiens]    94   2e-17
gi|23484113|gb|EAA19556.1| synthetic antigen of P.falciparum [Pl...    94   3e-17
gi|1488693|gb|AAC53030.1| translation initiation factor                93   4e-17
gi|34882946|ref|XP_223854.2| similar to Eukaryotic translation i...    93   5e-17
gi|50547961|ref|XP_501450.1| hypothetical protein [Yarrowia lipo...    92   7e-17
gi|729820|sp|P41110|I4G1_RABIT Eukaryotic translation initiation...    92   7e-17
gi|24649427|ref|NP_651188.1| CG10192-PA [Drosophila melanogaster...    92   1e-16
gi|19527659|gb|AAL89944.1| SD03848p [Drosophila melanogaster]          92   1e-16
gi|25083377|gb|AAN72067.1| eukaryotic initiation factor 4, eIF4-...    90   4e-16
gi|30696958|ref|NP_200595.2| eukaryotic translation initiation f...    90   4e-16
gi|30696956|ref|NP_851207.1| eukaryotic translation initiation f...    90   4e-16
gi|23306434|gb|AAN17444.1| eukaryotic initiation factor 4, eIF4-...    90   4e-16
gi|9758356|dbj|BAB08857.1| eukaryotic initiation factor 4, eIF4-...    90   4e-16
gi|23619075|ref|NP_705037.1| Plasmodium falciparum asparagine-ri...    89   6e-16
gi|47210720|emb|CAF92947.1| unnamed protein product [Tetraodon n...    88   1e-15
gi|46227721|gb|EAK88641.1| eIF4G eukaryotic initiation factor 4,...    88   2e-15
gi|11359286|pir||T42624 probable translation initiation factor e...    87   4e-15
gi|50302543|ref|XP_451207.1| unnamed protein product [Kluyveromy...    86   6e-15
gi|32416192|ref|XP_328574.1| hypothetical protein [Neurospora cr...    84   2e-14
gi|45201052|ref|NP_986622.1| AGL044Cp [Eremothecium gossypii] >g...    83   5e-14
gi|26325396|dbj|BAC26452.1| unnamed protein product [Mus musculus]     82   7e-14
gi|295675|gb|AAA02757.1| p150                                          82   9e-14
gi|6321601|ref|NP_011678.1| also called eIF4 (eIF-4) gamma; Tif4...    82   9e-14
gi|50286503|ref|XP_445680.1| unnamed protein product [Candida gl...    82   9e-14
gi|50286805|ref|XP_445832.1| unnamed protein product [Candida gl...    82   1e-13
gi|6321389|ref|NP_011466.1| also called eIF4 (eIF-4) gamma; Tif4...    79   6e-13
gi|219613|dbj|BAA02185.1| eIF-4 gamma [Homo sapiens]                   77   2e-12
gi|346208|pir||A44453 translation initiation factor eIF-4 gamma ...    77   2e-12
gi|34855470|ref|XP_218348.2| similar to Eif4g2 protein [Rattus n...    77   2e-12
gi|1082872|pir||S49172 translation initiation factor eIF-4 gamma...    74   2e-11
gi|28380948|gb|AAO41441.1| RE34257p [Drosophila melanogaster]          73   4e-11
gi|22026966|ref|NP_652027.2| CG3845-PB [Drosophila melanogaster]...    73   4e-11
gi|23478233|gb|EAA15375.1| ERYTHROCYTE MEMBRANE PROTEIN PFEMP3 [...    73   4e-11
gi|32398744|emb|CAD98704.1| conserved MIF4G domain protein [Cryp...    72   1e-10
gi|46229280|gb|EAK90129.1| eukaryotic translation initiation fac...    72   1e-10
gi|23508281|ref|NP_700950.1| hypothetical protein [Plasmodium fa...    69   8e-10
gi|2764589|emb|CAA04500.1| eukaryotic initiation factor 4 gamma ...    66   7e-09
gi|50747734|ref|XP_420967.1| PREDICTED: similar to Eukaryotic tr...    62   7e-08
gi|33589378|gb|AAQ22456.1| RE51676p [Drosophila melanogaster]          61   2e-07
gi|34858983|ref|XP_341908.1| similar to Eif4g2 protein [Rattus n...    58   1e-06
gi|47218931|emb|CAF98129.1| unnamed protein product [Tetraodon n...    57   3e-06
gi|30583403|gb|AAP35946.1| eukaryotic translation initiation fac...    57   4e-06
gi|38079674|ref|XP_358318.1| eukaryotic translation initiation f...    56   5e-06
gi|17511255|ref|NP_006442.2| poly(A) binding protein interacting...    54   2e-05
gi|33386693|ref|NP_877590.1| poly(A) binding protein interacting...    54   2e-05
gi|34452730|ref|NP_899152.1| poly(A) binding protein interacting...    54   2e-05
gi|27882007|gb|AAH43861.1| Paip1-pending-prov protein [Xenopus l...    53   6e-05
gi|21703908|ref|NP_663432.1| poly(A) binding protein interacting...    53   6e-05
gi|4704764|gb|AAD28259.1| polyA binding protein-interacting prot...    53   6e-05
gi|19074240|ref|NP_584846.1| similarity to transcription initiat...    53   6e-05
gi|42661129|ref|XP_371024.2| similar to poly(A) binding protein ...    52   8e-05
gi|16198512|gb|AAH15937.1| Poly(A) binding protein interacting p...    51   2e-04
gi|50416880|gb|AAH78339.1| Unknown (protein for MGC:91954) [Dani...    50   3e-04
gi|7488393|pir||T01452 translation initiation factor homolog F24...    47   0.003
gi|47226571|emb|CAG08587.1| unnamed protein product [Tetraodon n...    47   0.004
gi|15220777|ref|NP_176431.1| MIF4G domain-containing protein [Ar...    47   0.004
gi|47220557|emb|CAG05583.1| unnamed protein product [Tetraodon n...    45   0.016
gi|37046889|gb|AAH57913.1| Eif4g3 protein [Mus musculus]               44   0.021
gi|31228509|ref|XP_318068.1| ENSANGP00000023807 [Anopheles gambi...    39   0.67
gi|27503373|gb|AAH42146.1| KIAA0427 protein [Homo sapiens]             39   0.67
gi|40788256|dbj|BAA24857.2| KIAA0427 [Homo sapiens]                    39   0.67
gi|7662112|ref|NP_055587.1| KIAA0427 [Homo sapiens] >gnl|BL_ORD_...    39   0.67
gi|34932444|ref|XP_344702.1| similar to Hypothetical protein KIA...    39   0.87
gi|27379673|ref|NP_771202.1| blr4562 [Bradyrhizobium japonicum U...    39   0.87
gi|41235722|ref|NP_958742.1| gene model 672; hypothetical gene s...    39   0.87
gi|50510483|dbj|BAD32227.1| mKIAA0427 protein [Mus musculus]           39   0.87
gi|46137083|ref|XP_390233.1| hypothetical protein FG10057.1 [Gib...    39   0.87
gi|23480083|gb|EAA16740.1| GYF domain, putative [Plasmodium yoel...    39   1.1
gi|23508432|ref|NP_701101.1| hypothetical protein [Plasmodium fa...    39   1.1
gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa (...    38   1.5
gi|3183160|sp|Q23917|REGA_DICDI 3',5'-cyclic-nucleotide phosphod...    38   1.9
gi|31202913|ref|XP_310405.1| ENSANGP00000005621 [Anopheles gambi...    37   2.5
gi|42733973|gb|AAO52053.2| similar to Plasmodium falciparum. Hyp...    37   3.3
gi|32423161|ref|XP_332018.1| hypothetical protein [Neurospora cr...    37   3.3
gi|20090045|ref|NP_616120.1| glycosyltransferase [Methanosarcina...    37   4.3
gi|46435649|gb|EAK95026.1| hypothetical protein CaO19.11563 [Can...    37   4.3
gi|38108682|gb|EAA54664.1| hypothetical protein MG05456.4 [Magna...    36   5.6
gi|23612276|ref|NP_703856.1| hypothetical protein [Plasmodium fa...    36   5.6
gi|41408650|ref|NP_961486.1| hypothetical protein MAP2552 [Mycob...    36   5.6
gi|37805251|gb|AAH60288.1| BC018347 protein [Mus musculus]             36   7.4
gi|27371004|gb|AAH40746.1| BC018347 protein [Mus musculus]             36   7.4
gi|29347912|ref|NP_811415.1| conserved hypothetical protein [Bac...    36   7.4
gi|32409187|ref|XP_325074.1| hypothetical protein [Neurospora cr...    36   7.4
gi|15835225|ref|NP_296984.1| 1-deoxyxylulose-5-phosphate synthas...    36   7.4
gi|15827976|ref|NP_302239.1| PPE-family protein [Mycobacterium l...    36   7.4
gi|34882134|ref|XP_236876.2| similar to RIKEN cDNA 1700001E04 [R...    36   7.4
gi|50762037|ref|XP_424920.1| PREDICTED: similar to Topoisomerase...    35   9.6
gi|38080538|ref|XP_359230.1| eukaryotic translation initiation f...    35   9.6
gi|35193071|gb|AAH58674.1| BC058674 protein [Mus musculus]             35   9.6
gi|50510845|dbj|BAD32408.1| mKIAA1205 protein [Mus musculus]           35   9.6
gi|34856059|ref|XP_341853.1| similar to KIAA1205 protein [Rattus...    35   9.6
gi|46440411|gb|EAK99717.1| hypothetical protein CaO19.7475 [Cand...    35   9.6
gi|50728690|ref|XP_416238.1| PREDICTED: similar to E1A-associate...    35   9.6


>gi|17535211|ref|NP_495729.1| initiation factor (129.3 kD) (2I511)
            [Caenorhabditis elegans]
 gi|7506033|pir||T23748 hypothetical protein M110.4 - Caenorhabditis
            elegans
 gi|3878721|emb|CAA90261.1| Hypothetical protein M110.4a
            [Caenorhabditis elegans]
          Length = 1156

 Score = 1675 bits (4338), Expect = 0.0
 Identities = 884/1156 (76%), Positives = 884/1156 (76%)
 Frame = +1

Query: 1    MSNAVSRGPGRGKPNQDHNAVPMQDSSQQFVMPFVNTSGPVNSNYQRMPMNQSAXXXXXX 180
            MSNAVSRGPGRGKPNQDHNAVPMQDSSQQFVMPFVNTSGPVNSNYQRMPMNQSA
Sbjct: 1    MSNAVSRGPGRGKPNQDHNAVPMQDSSQQFVMPFVNTSGPVNSNYQRMPMNQSAYPQYGQ 60

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDYGHQPQMXXXXXXXXXXXXXXHPEMPYXXX 360
                                         DYGHQPQM              HPEMPY
Sbjct: 61   QQYNQPQTNHYYPPQAPQHQQQYGGYQRPDYGHQPQMYNQQYQGYQAPQQYHPEMPYQPA 120

Query: 361  XXXXXXXXXXXXXEPKRQRKALEIVDPTTKKAIEVTPHLXXXXXXXXXXXXXXXXEEEKK 540
                         EPKRQRKALEIVDPTTKKAIEVTPHL                EEEKK
Sbjct: 121  QPAQQQMTHTAPQEPKRQRKALEIVDPTTKKAIEVTPHLAPAAPAPAAPAAPIAPEEEKK 180

Query: 541  KQNITLEFLNQVKNELHHEDRRHDNXXXXXXXXXXXXXXXXLPNFSVPPPALGQTPPAAS 720
            KQNITLEFLNQVKNELHHEDRRHDN                LPNFSVPPPALGQTPPAAS
Sbjct: 181  KQNITLEFLNQVKNELHHEDRRHDNPPAVPAAVPAAVQAAVLPNFSVPPPALGQTPPAAS 240

Query: 721  IAPQVVPSVPKTPEAPAKADYEVKQAETLVTPVXXXXXXXXXXXXXXXXXXXXXXXVADV 900
            IAPQVVPSVPKTPEAPAKADYEVKQAETLVTPV                       VADV
Sbjct: 241  IAPQVVPSVPKTPEAPAKADYEVKQAETLVTPVSSPHASDTTTTTPASGTAESASTVADV 300

Query: 901  RVXXXXXXXXXXXXXXXXXXXXXXXRESTPDVADSSTEKTPXXXXXXXXXXXXXXXXXXX 1080
            RV                       RESTPDVADSSTEKTP
Sbjct: 301  RVTPTLTKEESKEETDDDKFEENDERESTPDVADSSTEKTPEELEIEKAQKEAEEIEKKK 360

Query: 1081 XXXXXXXXXXXXXXXXGSAVISDGTFGRDFMVTIREIEKVFSRTPCPLSPAQLADFGLDI 1260
                            GSAVISDGTFGRDFMVTIREIEKVFSRTPCPLSPAQLADFGLDI
Sbjct: 361  LREEALEKRIEELILAGSAVISDGTFGRDFMVTIREIEKVFSRTPCPLSPAQLADFGLDI 420

Query: 1261 KTMRVSDNKKPNFTPNWANKGGNRQQVPYXXXXXXXXXXXXXXXXXXXMHNKRPPVVRPS 1440
            KTMRVSDNKKPNFTPNWANKGGNRQQVPY                   MHNKRPPVVRPS
Sbjct: 421  KTMRVSDNKKPNFTPNWANKGGNRQQVPYRGRTTTDGTGRGGQQQRDRMHNKRPPVVRPS 480

Query: 1441 IERVQRVTLPSSKDAWKPDRQKTXXXXXXXXXXXXXXCKKVRSLMNKVTPTSQRPLTEEF 1620
            IERVQRVTLPSSKDAWKPDRQKT              CKKVRSLMNKVTPTSQRPLTEEF
Sbjct: 481  IERVQRVTLPSSKDAWKPDRQKTAEAVASEEAAVIEVCKKVRSLMNKVTPTSQRPLTEEF 540

Query: 1621 ISYNVSSNDAQLAQVVEIVFDKAVEEPKFCALYAEMCKAQANHELSQTGGKSAFRNKVLT 1800
            ISYNVSSNDAQLAQVVEIVFDKAVEEPKFCALYAEMCKAQANHELSQTGGKSAFRNKVLT
Sbjct: 541  ISYNVSSNDAQLAQVVEIVFDKAVEEPKFCALYAEMCKAQANHELSQTGGKSAFRNKVLT 600

Query: 1801 RTQMTFQXXXXXXXXXXXXXXXEEDPVKKELMLAEEKQKFRRRKFGVMTFMGYLYRNQLL 1980
            RTQMTFQ               EEDPVKKELMLAEEKQKFRRRKFGVMTFMGYLYRNQLL
Sbjct: 601  RTQMTFQDKKDIDADKLAIIEKEEDPVKKELMLAEEKQKFRRRKFGVMTFMGYLYRNQLL 660

Query: 1981 STKIVQTCTFELFNSIKDQDIKKEDVDEESIHCGLQLIETVGVMLDKSKDSTTVFLDQWF 2160
            STKIVQTCTFELFNSIKDQDIKKEDVDEESIHCGLQLIETVGVMLDKSKDSTTVFLDQWF
Sbjct: 661  STKIVQTCTFELFNSIKDQDIKKEDVDEESIHCGLQLIETVGVMLDKSKDSTTVFLDQWF 720

Query: 2161 QKLEAAKPYCSNKIRFMIMNLMELRKDKWIPRKSTESGPKKIDEIHKDIRQEKIENEKAX 2340
            QKLEAAKPYCSNKIRFMIMNLMELRKDKWIPRKSTESGPKKIDEIHKDIRQEKIENEKA
Sbjct: 721  QKLEAAKPYCSNKIRFMIMNLMELRKDKWIPRKSTESGPKKIDEIHKDIRQEKIENEKAR 780

Query: 2341 XXXXXXXXXXHGGVRPNSNSLRKSVPVSRNSLDRNRGMQHPEQKRXXXXXNTKLASSSVQ 2520
                      HGGVRPNSNSLRKSVPVSRNSLDRNRGMQHPEQKR     NTKLASSSVQ
Sbjct: 781  DQYDRDRDRRHGGVRPNSNSLRKSVPVSRNSLDRNRGMQHPEQKRAAAAANTKLASSSVQ 840

Query: 2521 PKNISLSSMDNNTLGKSKKEWHSGASGGGNTSSESAVPVKSAWGRRDSNDQRKKSTVDEK 2700
            PKNISLSSMDNNTLGKSKKEWHSGASGGGNTSSESAVPVKSAWGRRDSNDQRKKSTVDEK
Sbjct: 841  PKNISLSSMDNNTLGKSKKEWHSGASGGGNTSSESAVPVKSAWGRRDSNDQRKKSTVDEK 900

Query: 2701 QAALAAAKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVRAKIMNTVKSDLLEMSSGE 2880
            QAALAAAKE                              AVRAKIMNTVKSDLLEMSSGE
Sbjct: 901  QAALAAAKEISAMSISSRRSTSQNSNTDKTDDELTEEEKAVRAKIMNTVKSDLLEMSSGE 960

Query: 2881 LSQKELVDSITDYVGKEKYGSPSLTVVYEMIIRAVIEKGLKDDDRKKLAIALRMSLVSKT 3060
            LSQKELVDSITDYVGKEKYGSPSLTVVYEMIIRAVIEKGLKDDDRKKLAIALRMSLVSKT
Sbjct: 961  LSQKELVDSITDYVGKEKYGSPSLTVVYEMIIRAVIEKGLKDDDRKKLAIALRMSLVSKT 1020

Query: 3061 EKQAFIEGATRFCKFANDVELQQDYPKLWTVTGEVLVNTSHAPHDEIGEVESFSLADMKP 3240
            EKQAFIEGATRFCKFANDVELQQDYPKLWTVTGEVLVNTSHAPHDEIGEVESFSLADMKP
Sbjct: 1021 EKQAFIEGATRFCKFANDVELQQDYPKLWTVTGEVLVNTSHAPHDEIGEVESFSLADMKP 1080

Query: 3241 IFSAAKGEGNKKFDLLVQVLKQLIELELEVTGAAEGISWEFSDMKLKTEMEEGLSAEMEA 3420
            IFSAAKGEGNKKFDLLVQVLKQLIELELEVTGAAEGISWEFSDMKLKTEMEEGLSAEMEA
Sbjct: 1081 IFSAAKGEGNKKFDLLVQVLKQLIELELEVTGAAEGISWEFSDMKLKTEMEEGLSAEMEA 1140

Query: 3421 VTFKNGKTLSSYLTGN 3468
            VTFKNGKTLSSYLTGN
Sbjct: 1141 VTFKNGKTLSSYLTGN 1156


>gi|35210137|emb|CAE47470.1| Hypothetical protein M110.4b
            [Caenorhabditis elegans]
          Length = 1155

 Score = 1669 bits (4322), Expect = 0.0
 Identities = 883/1156 (76%), Positives = 883/1156 (76%)
 Frame = +1

Query: 1    MSNAVSRGPGRGKPNQDHNAVPMQDSSQQFVMPFVNTSGPVNSNYQRMPMNQSAXXXXXX 180
            MSNAVSRGPGRGKPNQDHNAVPMQDSSQQFVMPFVNTSGPVNSNYQRMPMNQSA
Sbjct: 1    MSNAVSRGPGRGKPNQDHNAVPMQDSSQQFVMPFVNTSGPVNSNYQRMPMNQSAYPQYGQ 60

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDYGHQPQMXXXXXXXXXXXXXXHPEMPYXXX 360
                                         DYGHQPQM              HPEMPY
Sbjct: 61   QQYNQPQTNHYYPPQAPQHQQQYGGYQRPDYGHQPQMYNQQYQGYQAPQQYHPEMPYQPA 120

Query: 361  XXXXXXXXXXXXXEPKRQRKALEIVDPTTKKAIEVTPHLXXXXXXXXXXXXXXXXEEEKK 540
                         EPKRQRKALEIVDPTTKKAIEVTPHL                EEEKK
Sbjct: 121  QPAQQQMTHTAPQEPKRQRKALEIVDPTTKKAIEVTPHLAPAAPAPAAPAAPIAPEEEKK 180

Query: 541  KQNITLEFLNQVKNELHHEDRRHDNXXXXXXXXXXXXXXXXLPNFSVPPPALGQTPPAAS 720
            KQNITLEFLNQVKNELHHEDRRHDN                LPNFSVPPPALGQTPPAAS
Sbjct: 181  KQNITLEFLNQVKNELHHEDRRHDNPPAVPAAVPAAVQAAVLPNFSVPPPALGQTPPAAS 240

Query: 721  IAPQVVPSVPKTPEAPAKADYEVKQAETLVTPVXXXXXXXXXXXXXXXXXXXXXXXVADV 900
            IAPQVVPSVPKTPEAPAKADYEVKQAETLVTPV                       VADV
Sbjct: 241  IAPQVVPSVPKTPEAPAKADYEVKQAETLVTPVSSPHASDTTTTTPASGTAESASTVADV 300

Query: 901  RVXXXXXXXXXXXXXXXXXXXXXXXRESTPDVADSSTEKTPXXXXXXXXXXXXXXXXXXX 1080
            RV                       RESTPDVADSSTEKTP
Sbjct: 301  RVTPTLTKEESKEETDDDKFEENDERESTPDVADSSTEKTPEELEIEKAQKEAEEIEKKK 360

Query: 1081 XXXXXXXXXXXXXXXXGSAVISDGTFGRDFMVTIREIEKVFSRTPCPLSPAQLADFGLDI 1260
                            GSAVISDGTFGRDFMVTIREIEKVFSRTPCPLSPAQLADFGLDI
Sbjct: 361  LREEALEKRIEELILAGSAVISDGTFGRDFMVTIREIEKVFSRTPCPLSPAQLADFGLDI 420

Query: 1261 KTMRVSDNKKPNFTPNWANKGGNRQQVPYXXXXXXXXXXXXXXXXXXXMHNKRPPVVRPS 1440
            KTMRVSDNKKPNFTPNWANKGGNRQQ PY                   MHNKRPPVVRPS
Sbjct: 421  KTMRVSDNKKPNFTPNWANKGGNRQQ-PYRGRTTTDGTGRGGQQQRDRMHNKRPPVVRPS 479

Query: 1441 IERVQRVTLPSSKDAWKPDRQKTXXXXXXXXXXXXXXCKKVRSLMNKVTPTSQRPLTEEF 1620
            IERVQRVTLPSSKDAWKPDRQKT              CKKVRSLMNKVTPTSQRPLTEEF
Sbjct: 480  IERVQRVTLPSSKDAWKPDRQKTAEAVASEEAAVIEVCKKVRSLMNKVTPTSQRPLTEEF 539

Query: 1621 ISYNVSSNDAQLAQVVEIVFDKAVEEPKFCALYAEMCKAQANHELSQTGGKSAFRNKVLT 1800
            ISYNVSSNDAQLAQVVEIVFDKAVEEPKFCALYAEMCKAQANHELSQTGGKSAFRNKVLT
Sbjct: 540  ISYNVSSNDAQLAQVVEIVFDKAVEEPKFCALYAEMCKAQANHELSQTGGKSAFRNKVLT 599

Query: 1801 RTQMTFQXXXXXXXXXXXXXXXEEDPVKKELMLAEEKQKFRRRKFGVMTFMGYLYRNQLL 1980
            RTQMTFQ               EEDPVKKELMLAEEKQKFRRRKFGVMTFMGYLYRNQLL
Sbjct: 600  RTQMTFQDKKDIDADKLAIIEKEEDPVKKELMLAEEKQKFRRRKFGVMTFMGYLYRNQLL 659

Query: 1981 STKIVQTCTFELFNSIKDQDIKKEDVDEESIHCGLQLIETVGVMLDKSKDSTTVFLDQWF 2160
            STKIVQTCTFELFNSIKDQDIKKEDVDEESIHCGLQLIETVGVMLDKSKDSTTVFLDQWF
Sbjct: 660  STKIVQTCTFELFNSIKDQDIKKEDVDEESIHCGLQLIETVGVMLDKSKDSTTVFLDQWF 719

Query: 2161 QKLEAAKPYCSNKIRFMIMNLMELRKDKWIPRKSTESGPKKIDEIHKDIRQEKIENEKAX 2340
            QKLEAAKPYCSNKIRFMIMNLMELRKDKWIPRKSTESGPKKIDEIHKDIRQEKIENEKA
Sbjct: 720  QKLEAAKPYCSNKIRFMIMNLMELRKDKWIPRKSTESGPKKIDEIHKDIRQEKIENEKAR 779

Query: 2341 XXXXXXXXXXHGGVRPNSNSLRKSVPVSRNSLDRNRGMQHPEQKRXXXXXNTKLASSSVQ 2520
                      HGGVRPNSNSLRKSVPVSRNSLDRNRGMQHPEQKR     NTKLASSSVQ
Sbjct: 780  DQYDRDRDRRHGGVRPNSNSLRKSVPVSRNSLDRNRGMQHPEQKRAAAAANTKLASSSVQ 839

Query: 2521 PKNISLSSMDNNTLGKSKKEWHSGASGGGNTSSESAVPVKSAWGRRDSNDQRKKSTVDEK 2700
            PKNISLSSMDNNTLGKSKKEWHSGASGGGNTSSESAVPVKSAWGRRDSNDQRKKSTVDEK
Sbjct: 840  PKNISLSSMDNNTLGKSKKEWHSGASGGGNTSSESAVPVKSAWGRRDSNDQRKKSTVDEK 899

Query: 2701 QAALAAAKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVRAKIMNTVKSDLLEMSSGE 2880
            QAALAAAKE                              AVRAKIMNTVKSDLLEMSSGE
Sbjct: 900  QAALAAAKEISAMSISSRRSTSQNSNTDKTDDELTEEEKAVRAKIMNTVKSDLLEMSSGE 959

Query: 2881 LSQKELVDSITDYVGKEKYGSPSLTVVYEMIIRAVIEKGLKDDDRKKLAIALRMSLVSKT 3060
            LSQKELVDSITDYVGKEKYGSPSLTVVYEMIIRAVIEKGLKDDDRKKLAIALRMSLVSKT
Sbjct: 960  LSQKELVDSITDYVGKEKYGSPSLTVVYEMIIRAVIEKGLKDDDRKKLAIALRMSLVSKT 1019

Query: 3061 EKQAFIEGATRFCKFANDVELQQDYPKLWTVTGEVLVNTSHAPHDEIGEVESFSLADMKP 3240
            EKQAFIEGATRFCKFANDVELQQDYPKLWTVTGEVLVNTSHAPHDEIGEVESFSLADMKP
Sbjct: 1020 EKQAFIEGATRFCKFANDVELQQDYPKLWTVTGEVLVNTSHAPHDEIGEVESFSLADMKP 1079

Query: 3241 IFSAAKGEGNKKFDLLVQVLKQLIELELEVTGAAEGISWEFSDMKLKTEMEEGLSAEMEA 3420
            IFSAAKGEGNKKFDLLVQVLKQLIELELEVTGAAEGISWEFSDMKLKTEMEEGLSAEMEA
Sbjct: 1080 IFSAAKGEGNKKFDLLVQVLKQLIELELEVTGAAEGISWEFSDMKLKTEMEEGLSAEMEA 1139

Query: 3421 VTFKNGKTLSSYLTGN 3468
            VTFKNGKTLSSYLTGN
Sbjct: 1140 VTFKNGKTLSSYLTGN 1155


>gi|39587235|emb|CAE57703.1| Hypothetical protein CBG00709
            [Caenorhabditis briggsae]
          Length = 1163

 Score = 1003 bits (2594), Expect = 0.0
 Identities = 588/1180 (49%), Positives = 679/1180 (56%), Gaps = 26/1180 (2%)
 Frame = +1

Query: 1    MSNAVSRGP--GRGKPNQDHNAVPMQDSSQQFVMPFVNTSGPVNSNYQRMPMNQSAXXXX 174
            MSNAVSRGP  GRGKPNQ+HNA  + D  QQFVMP V   G     YQ+  M Q
Sbjct: 1    MSNAVSRGPPGGRGKPNQNHNAGGVPDQGQQFVMPVVPQQGQGYQRYQQNQMQQQGYQQP 60

Query: 175  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDYGHQPQMXXXXXXXXXXXXXXHPEMPYX 354
                                            Y HQP M               P   Y
Sbjct: 61   YQQQYQHQQYQQYQPHSQAPPYQQHAQPPQPLYSHQPHMYNQSYQYRA------PPQQYM 114

Query: 355  XXXXXXXXXXXXXXXEP----KRQRKALEIVDPTTKKAIEVTPHLXXXXXXXXXXXXXXX 522
                            P    KRQRK LEIVDP TKKAIEVTP
Sbjct: 115  QDTVTFPQPSQPPMTAPAPAEKRQRKLLEIVDPNTKKAIEVTP--LQTPTAPVIPAVPLD 172

Query: 523  XEEEKKKQNITLEFLNQVKNELHHEDRRHDNXXXXXXXXXXXXXXXXLPNFSVPPPALGQ 702
             E+EKKK  ++    +Q+K ++       +                 LPNFS PPP++
Sbjct: 173  PEDEKKKAELS----HQLKEQVRQRFTSTNTDDGHQSKSPNLQGSGPLPNFSQPPPSISS 228

Query: 703  TPPAASIAPQVVPSVPKTPEAPAKADYEVKQAETLVTPVXXXXXXXXXXXXXXXXXXXXX 882
            + P A + P+V    PKTP+A  K +     AE  VTPV
Sbjct: 229  SHPVAEVVPEVTQPAPKTPDAQTKVEAGAPPAEP-VTPVSSPQSSETTNTTPASGTAESA 287

Query: 883  XXVADVRVXXXXXXXXXXXXXXXXXXXXXXXRESTPDVADSSTEKTPXXXXXXXXXXXXX 1062
                + RV                       R  TPD+ +S  EKTP
Sbjct: 288  VAGHEARVTPTLQKEESKEEDDDDKFDEVD-RNETPDLTESQIEKTPEELEEEKAQKEAE 346

Query: 1063 XXXXXXXXXXXXXXXXXXXXXXGSAVISDGTFGRDFMVTIREIEKVFSRTPCPLSPAQLA 1242
                                  G A I  G F RDFM+T+R +EK F+RTPCPLS  QL
Sbjct: 347  EKEKRRIREESLEKKLEELVASGDANIEKGYFARDFMITMRALEKEFARTPCPLSQQQLN 406

Query: 1243 DFGLDIKTMRVSDNKKPNFTPNWA-NKGGNRQQVPYXXXXXXXXXXXXXXXXXXXM-HNK 1416
            DFGLDIKTM++  NKK NFTP W  N  GNRQQ PY                     HNK
Sbjct: 407  DFGLDIKTMQIPQNKKTNFTPQWMPNNKGNRQQNPYRGRTTTDGTGRGGQQQRDRGGHNK 466

Query: 1417 RPPVVRPSIERVQRVTLPSSKDAWKPDRQKTXXXXXXXXXXXXXXCKKVRSLMNKVTPTS 1596
            RPP VR SIER+ RVTL SSKDAWKPDRQKT              CKKVRSLMNKVTPTS
Sbjct: 467  RPPPVRASIERIPRVTLASSKDAWKPDRQKTAEDISAEEAAVKEVCKKVRSLMNKVTPTS 526

Query: 1597 QRPLTEEFISYNVSSNDAQLAQVVEIVFDKAVEEPKFCALYAEMCKAQANHELSQTGGKS 1776
            Q PLT EFISYNVSSN++QL QVV IVFDKAVEEPKFCALYAEMCKAQ  HEL+++ GKS
Sbjct: 527  QGPLTAEFISYNVSSNESQLTQVVGIVFDKAVEEPKFCALYAEMCKAQVTHELAKSNGKS 586

Query: 1777 AFRNKVLTRTQMTFQXXXXXXXXXXXXXXXEEDPVKKELMLAEEKQKFRRRKFGVMTFMG 1956
            AFRN +LTRTQ  FQ               EEDPVK+E ML EEKQKFRRRKFGVM F+G
Sbjct: 587  AFRNTILTRTQSFFQDKRDIDAEKLAVIEKEEDPVKREAMLIEEKQKFRRRKFGVMAFIG 646

Query: 1957 YLYRNQLLSTKIVQTCTFELFNSI-------KDQDIKKEDVDEESIHCGLQLIETVGVML 2115
            YLYRN LLSTKIVQ+C+ ELF SI       K+Q + KED DEESIHCGLQLIETVGV+L
Sbjct: 647  YLYRNNLLSTKIVQSCSLELFASILPKKIDEKEQLLNKEDFDEESIHCGLQLIETVGVIL 706

Query: 2116 DKSKDSTTVFLDQWFQKLEAAKPYCSNKIRFMIMNLMELRKDKWIPRKSTESGPKKIDEI 2295
            DKSKD    FLDQWF+KLE AKP CSNKIRFMIMNL ELRKDKW+PRKS ESGPKKIDEI
Sbjct: 707  DKSKDPGPAFLDQWFKKLEDAKPLCSNKIRFMIMNLNELRKDKWVPRKSVESGPKKIDEI 766

Query: 2296 HKDIRQEKIENEKAXXXXXXXXXXXH-GGVRPNSNSLRKSVPVSRNSLDRNRGMQHPEQK 2472
            HKDIRQEKI+NEKA           H GGVR +SNSLRK VPVSRNSLDRNR    P+QK
Sbjct: 767  HKDIRQEKIDNEKARDQYDRDRDRRHGGGVRQSSNSLRKQVPVSRNSLDRNRA---PDQK 823

Query: 2473 RXXXXXNTKLASSSVQPKNISLSSMDNNTLGKSKKEWHSGASGGGNTSSESAVPVKS--- 2643
            R     NTKLASS+VQPKNI+LSS   +   ++K  W  GASGGGN +  +A P  +
Sbjct: 824  RAQAAANTKLASSNVQPKNITLSSAIGDQSLRTKTSWSGGASGGGNAAESTAAPAAAGGK 883

Query: 2644 AWGRRDSNDQRKKSTVDEKQAALAAAKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAV 2823
            AWGRRDSNDQRKKS +DEKQA+LAAA+E                              A+
Sbjct: 884  AWGRRDSNDQRKKSAIDEKQASLAAAREIGNMTLSARRSASQTSIPDKVDEGLTDEEKAL 943

Query: 2824 RAKIMNTVKSDLLEMSSGELSQKELVDSIT-DYVGKEKYGSPSLTVVYEMIIRAVIEKGL 3000
            RAKIMN+VKSD+ E+ S +LSQ+E+ DS + DYVG  KYG+PSLTVVYEMIIRAV EK +
Sbjct: 944  RAKIMNSVKSDIQEVVSEDLSQQEMADSFSKDYVGSAKYGNPSLTVVYEMIIRAVSEKNM 1003

Query: 3001 KDDDRKKLAIALRMSLVSKTEKQAFIEGATRFCKFANDVELQQDYPKLWTVTGEVLVNTS 3180
            K+++RKKLA  LRMSLVS   KQ+FI+G TRFCKFA D EL QD+P++W VTGEVL+NT
Sbjct: 1004 KEEERKKLACVLRMSLVSDAAKQSFIDGVTRFCKFAIDTELYQDFPQIWNVTGEVLMNTM 1063

Query: 3181 HAPHDEIG--EVESFSLADMKPIFSAAKGEGN---KKFDLLVQVLKQLIELELEVTGAAE 3345
            H  H+ IG  EV++ SL DMK  F  AK E       F L V+V+K+  + E+  TGA E
Sbjct: 1064 HVHHEVIGDSEVKTISLTDMKSAFLTAKIEKRDNVMSFVLFVEVIKRWTDAEIAETGAVE 1123

Query: 3346 GISWEFSDMKLKTEME-EGLSAEMEAVTFKNGKTLSSYLT 3462
             ++WEF D+  + +ME EGL  EM+ V   NGKTLSS L+
Sbjct: 1124 ALAWEFQDLPYREKMEKEGLRTEMDTVKASNGKTLSSLLS 1163




[DB home][top]