Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= M28_11
(390 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|7498235|pir||T20382 hypothetical protein D2089.1 - Caenorhabd... 266 9e-71
gi|25153312|ref|NP_741040.1| serine/aRginine rich pre-mRNA SPlic... 266 9e-71
gi|25153309|ref|NP_741039.1| serine/aRginine rich pre-mRNA SPlic... 266 9e-71
gi|39597397|emb|CAE59627.1| Hypothetical protein CBG03040 [Caeno... 228 2e-59
gi|48104503|ref|XP_392951.1| similar to CG9712-PA [Apis mellifera] 99 2e-20
gi|31197935|ref|XP_307915.1| ENSANGP00000021871 [Anopheles gambi... 84 8e-16
gi|47937510|gb|AAH72078.1| LOC432318 protein [Xenopus laevis] 75 3e-13
gi|17137528|ref|NP_477347.1| CG4602-PA [Drosophila melanogaster]... 74 5e-13
gi|7532408|gb|AAC32822.3| splicing factor SRp54 [Drosophila mela... 74 5e-13
gi|27370734|gb|AAH38928.1| 2610019N13Rik protein [Mus musculus] 74 9e-13
gi|26325358|dbj|BAC26433.1| unnamed protein product [Mus musculus] 74 9e-13
gi|12847619|dbj|BAB27642.1| unnamed protein product [Mus musculus] 74 9e-13
gi|27370728|gb|AAH37053.1| 2610019N13Rik protein [Mus musculus] 74 9e-13
gi|47124103|gb|AAH69945.1| Unknown (protein for IMAGE:3582097) [... 74 9e-13
gi|26252134|gb|AAH40436.1| Splicing factor p54 [Homo sapiens] 73 1e-12
gi|4759100|ref|NP_004759.1| splicing factor p54; arginine-rich 5... 73 1e-12
gi|33878597|gb|AAH17359.1| SFRS11 protein [Homo sapiens] 73 1e-12
gi|33877173|gb|AAH02784.1| SFRS11 protein [Homo sapiens] 73 1e-12
gi|12314247|emb|CAC04184.1| dJ677H15.2 (splicing factor, arginin... 73 1e-12
gi|33874948|gb|AAH09840.1| SFRS11 protein [Homo sapiens] 73 1e-12
gi|47220375|emb|CAF98474.1| unnamed protein product [Tetraodon n... 73 1e-12
gi|47214877|emb|CAG01181.1| unnamed protein product [Tetraodon n... 72 2e-12
gi|26342486|dbj|BAC34905.1| unnamed protein product [Mus musculus] 70 1e-11
gi|41054625|ref|NP_955870.1| splicing factor, arginine/serine-ri... 70 1e-11
gi|28703790|gb|AAH47322.1| Similar to expressed sequence AI45075... 69 2e-11
gi|47228418|emb|CAG05238.1| unnamed protein product [Tetraodon n... 66 2e-10
gi|50417233|gb|AAH78219.1| Unknown (protein for MGC:100974) [Dan... 65 3e-10
gi|34860993|ref|XP_342365.1| similar to splicing factor p54; arg... 65 3e-10
gi|26333761|dbj|BAC30598.1| unnamed protein product [Mus musculus] 65 4e-10
gi|50751756|ref|XP_422541.1| PREDICTED: similar to splicing fact... 50 1e-05
gi|50761541|ref|XP_424756.1| PREDICTED: similar to Splicing fact... 45 4e-04
gi|34897896|ref|NP_910294.1| ESTs D15336(C0474),C98053(C0474) co... 39 0.031
gi|38344181|emb|CAE03512.2| OSJNBa0053K19.20 [Oryza sativa (japo... 38 0.041
gi|18087665|gb|AAL58957.1| putative arginine-rich protein [Oryza... 37 0.090
gi|8671859|gb|AAF78422.1| Contains similarity to RNA-binding pro... 37 0.090
gi|34877096|ref|XP_237223.2| similar to serine-arginine-rich spl... 37 0.090
gi|15220902|ref|NP_175769.1| RNA-binding protein, putative [Arab... 37 0.090
gi|18421342|ref|NP_568522.1| RNA recognition motif (RRM)-contain... 37 0.12
gi|49097362|ref|XP_410141.1| hypothetical protein AN6004.2 [Aspe... 36 0.15
gi|47227145|emb|CAG00507.1| unnamed protein product [Tetraodon n... 35 0.34
gi|23478103|gb|EAA15281.1| maebl [Plasmodium yoelii yoelii] 35 0.45
gi|21592583|gb|AAM64532.1| putative DNA binding protein [Arabido... 34 0.59
gi|15221071|ref|NP_172630.1| RNA-binding protein 45 (RBP45), put... 34 0.59
gi|34903832|ref|NP_913263.1| ATT4F9_7(AL049523|pid:g4539439) Ara... 34 0.77
gi|46127975|ref|XP_388541.1| hypothetical protein FG08365.1 [Gib... 34 0.77
gi|15231858|ref|NP_188063.1| RNA-binding protein, putative [Arab... 33 1.0
gi|34875603|ref|XP_343557.1| similar to hypothetical protein MGC... 33 1.3
gi|19111982|ref|NP_595190.1| putative RNA binding protein [Schiz... 33 1.7
gi|6714467|gb|AAF26153.1| unknown protein [Arabidopsis thaliana] 32 2.2
gi|17541324|ref|NP_500504.1| small nuclear ribonucleoprotein (rn... 32 2.2
gi|34894008|ref|NP_908329.1| P0672D08.14 [Oryza sativa (japonica... 32 2.2
gi|7505522|pir||T29387 hypothetical protein K08D10.4 - Caenorhab... 32 2.2
gi|23508396|ref|NP_701065.1| hypothetical protein [Plasmodium fa... 32 2.2
gi|32413971|ref|XP_327465.1| hypothetical protein [Neurospora cr... 32 2.9
gi|28950237|emb|CAD71104.1| conserved hypothetical protein [Neur... 32 2.9
gi|50260468|gb|EAL23123.1| hypothetical protein CNBA4680 [Crypto... 32 2.9
gi|50259447|gb|EAL22120.1| hypothetical protein CNBC2580 [Crypto... 32 3.8
gi|10176787|dbj|BAB09901.1| unnamed protein product [Arabidopsis... 32 3.8
gi|50759641|ref|XP_417718.1| PREDICTED: similar to heterogeneous... 31 5.0
gi|23509249|ref|NP_701916.1| hypothetical protein, conserved [Pl... 31 5.0
gi|34866338|ref|XP_232688.2| similar to splicing-related factor ... 31 5.0
gi|21284030|ref|NP_647118.1| ORFID:MW2301~hypothetical protein, ... 31 5.0
gi|39585995|emb|CAE68286.1| Hypothetical protein CBG13971 [Caeno... 31 5.0
gi|49484597|ref|YP_041821.1| AraC family regulatory protein [Sta... 31 5.0
gi|15925371|ref|NP_372905.1| hypothetical protein SAV2381 [Staph... 31 5.0
gi|38344906|emb|CAD41850.2| OSJNBb0079B02.9 [Oryza sativa (japon... 31 5.0
gi|26338141|dbj|BAC32756.1| unnamed protein product [Mus musculus] 31 6.5
gi|13629286|ref|XP_001541.2| heterogeneous nuclear ribonucleopro... 31 6.5
gi|28212266|ref|NP_783193.1| heterogeneous nuclear ribonucleopro... 31 6.5
gi|33859724|ref|NP_083147.1| heterogeneous nuclear ribonucleopro... 31 6.5
gi|12655185|gb|AAH01449.1| HNRPR protein [Homo sapiens] 31 6.5
gi|34365228|emb|CAE45953.1| hypothetical protein [Homo sapiens] 31 6.5
gi|11357772|pir||T49094 hypothetical protein F4F15.260 - Arabido... 31 6.5
gi|13435603|gb|AAH04679.1| Hnrpr protein [Mus musculus] 31 6.5
gi|5031755|ref|NP_005817.1| heterogeneous nuclear ribonucleoprot... 31 6.5
gi|50252270|dbj|BAD28276.1| putative RNA-binding protein [Oryza ... 31 6.5
gi|26347007|dbj|BAC37152.1| unnamed protein product [Mus musculus] 31 6.5
gi|26373715|dbj|BAB27533.2| unnamed protein product [Mus musculus] 31 6.5
gi|39595582|emb|CAE67083.1| Hypothetical protein CBG12494 [Caeno... 31 6.5
gi|48865321|ref|ZP_00319183.1| COG0436: Aspartate/tyrosine/aroma... 30 8.5
gi|33944845|ref|XP_340570.1| RNA-binding protein, putative [Tryp... 30 8.5
gi|717163|gb|AAA63801.1| tbRRM1 [Trypanosoma brucei brucei] 30 8.5
gi|24660112|ref|NP_648122.1| CG14835-PA [Drosophila melanogaster... 30 8.5
gi|50290541|ref|XP_447702.1| unnamed protein product [Candida gl... 30 8.5
>gi|7498235|pir||T20382 hypothetical protein D2089.1 -
Caenorhabditis elegans
Length = 480
Score = 266 bits (679), Expect = 9e-71
Identities = 130/130 (100%), Positives = 130/130 (100%)
Frame = +1
Query: 1 MSGEEKEKVKILHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEGNITANTLLKTAFIK 180
MSGEEKEKVKILHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEGNITANTLLKTAFIK
Sbjct: 1 MSGEEKEKVKILHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEGNITANTLLKTAFIK 60
Query: 181 FDDERCVEVAQHLTNTVVIDCAIVCLPYPNPVIPDEESFFNSGGSTTAGQRQLPPHVTNK 360
FDDERCVEVAQHLTNTVVIDCAIVCLPYPNPVIPDEESFFNSGGSTTAGQRQLPPHVTNK
Sbjct: 61 FDDERCVEVAQHLTNTVVIDCAIVCLPYPNPVIPDEESFFNSGGSTTAGQRQLPPHVTNK 120
Query: 361 IQESDDGSAL 390
IQESDDGSAL
Sbjct: 121 IQESDDGSAL 130
>gi|25153312|ref|NP_741040.1| serine/aRginine rich pre-mRNA SPlicing
factor (rsp-7) [Caenorhabditis elegans]
gi|20338918|emb|CAD30448.1| Hypothetical protein D2089.1b
[Caenorhabditis elegans]
gi|20338922|emb|CAD30436.1| Hypothetical protein D2089.1b
[Caenorhabditis elegans]
Length = 137
Score = 266 bits (679), Expect = 9e-71
Identities = 130/130 (100%), Positives = 130/130 (100%)
Frame = +1
Query: 1 MSGEEKEKVKILHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEGNITANTLLKTAFIK 180
MSGEEKEKVKILHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEGNITANTLLKTAFIK
Sbjct: 1 MSGEEKEKVKILHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEGNITANTLLKTAFIK 60
Query: 181 FDDERCVEVAQHLTNTVVIDCAIVCLPYPNPVIPDEESFFNSGGSTTAGQRQLPPHVTNK 360
FDDERCVEVAQHLTNTVVIDCAIVCLPYPNPVIPDEESFFNSGGSTTAGQRQLPPHVTNK
Sbjct: 61 FDDERCVEVAQHLTNTVVIDCAIVCLPYPNPVIPDEESFFNSGGSTTAGQRQLPPHVTNK 120
Query: 361 IQESDDGSAL 390
IQESDDGSAL
Sbjct: 121 IQESDDGSAL 130
>gi|25153309|ref|NP_741039.1| serine/aRginine rich pre-mRNA SPlicing
factor (52.7 kD) (rsp-7) [Caenorhabditis elegans]
gi|20338917|emb|CAA90135.2| Hypothetical protein D2089.1a
[Caenorhabditis elegans]
gi|20338921|emb|CAA85414.2| Hypothetical protein D2089.1a
[Caenorhabditis elegans]
Length = 452
Score = 266 bits (679), Expect = 9e-71
Identities = 130/130 (100%), Positives = 130/130 (100%)
Frame = +1
Query: 1 MSGEEKEKVKILHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEGNITANTLLKTAFIK 180
MSGEEKEKVKILHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEGNITANTLLKTAFIK
Sbjct: 1 MSGEEKEKVKILHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEGNITANTLLKTAFIK 60
Query: 181 FDDERCVEVAQHLTNTVVIDCAIVCLPYPNPVIPDEESFFNSGGSTTAGQRQLPPHVTNK 360
FDDERCVEVAQHLTNTVVIDCAIVCLPYPNPVIPDEESFFNSGGSTTAGQRQLPPHVTNK
Sbjct: 61 FDDERCVEVAQHLTNTVVIDCAIVCLPYPNPVIPDEESFFNSGGSTTAGQRQLPPHVTNK 120
Query: 361 IQESDDGSAL 390
IQESDDGSAL
Sbjct: 121 IQESDDGSAL 130