Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= R06A4_5
(1260 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17535479|ref|NP_496988.1| IMportin Beta (46.8 kD) (imb-2) [Ca... 846 0.0
gi|17535481|ref|NP_496987.1| IMportin Beta (imb-2) [Caenorhabdit... 822 0.0
gi|39582715|emb|CAE65921.1| Hypothetical protein CBG11089 [Caeno... 749 0.0
gi|23510379|ref|NP_002261.2| transportin 1; karyopherin (importi... 475 e-132
gi|1613834|gb|AAC50723.1| transportin [Homo sapiens] 475 e-132
gi|1622943|gb|AAB68948.1| MIP [Homo sapiens] 474 e-132
gi|21618743|gb|AAH31571.1| Tnpo1 protein [Mus musculus] 473 e-132
gi|3293344|gb|AAC25709.1| transportin; TRN [Xenopus laevis] 473 e-132
gi|26325884|dbj|BAC26696.1| unnamed protein product [Mus musculus] 473 e-132
gi|30520133|ref|NP_848831.1| transportin 1; karyopherin (importi... 473 e-132
gi|48675813|ref|NP_038461.2| transportin 2 (importin 3, karyophe... 473 e-132
gi|34851417|ref|XP_222478.2| similar to karyopherin (importin) b... 473 e-132
gi|21703780|ref|NP_663365.1| karyopherin (importin) beta 2b [Mus... 473 e-132
gi|26325714|dbj|BAC26611.1| unnamed protein product [Mus musculus] 473 e-132
gi|48095991|ref|XP_392373.1| similar to transportin 1; karyopher... 466 e-130
gi|45504418|sp|O14787|TNP2_HUMAN Transportin 2 (Karyopherin beta... 464 e-129
gi|2440004|gb|AAB71349.1| karyopherin beta2b homolog [Homo sapiens] 462 e-129
gi|2589204|gb|AAB83973.1| transportin2 [Homo sapiens] 462 e-129
gi|31214900|ref|XP_315921.1| ENSANGP00000013476 [Anopheles gambi... 461 e-128
gi|47212752|emb|CAF90598.1| unnamed protein product [Tetraodon n... 461 e-128
gi|5107636|pdb|1QBK|B Chain B, Structure Of The Karyopherin Beta... 459 e-128
gi|50761696|ref|XP_424806.1| PREDICTED: similar to transportin 1... 456 e-127
gi|47223870|emb|CAG06047.1| unnamed protein product [Tetraodon n... 454 e-126
gi|27819795|gb|AAO24946.1| RE59670p [Drosophila melanogaster] 450 e-125
gi|17137558|ref|NP_477368.1| CG7398-PA [Drosophila melanogaster]... 450 e-125
gi|20151549|gb|AAM11134.1| LD12333p [Drosophila melanogaster] 450 e-125
gi|3293342|gb|AAC25708.1| transportin; TRN [Drosophila melanogas... 443 e-123
gi|34853468|ref|XP_219500.2| similar to karyopherin beta 2; impo... 427 e-118
gi|24659272|ref|NP_648038.1| CG8219-PA [Drosophila melanogaster]... 390 e-107
gi|21429774|gb|AAM50565.1| AT21921p [Drosophila melanogaster] 389 e-107
gi|24817248|emb|CAD56216.1| transportin-like protein [Cicer arie... 351 2e-95
gi|50258039|gb|EAL20733.1| hypothetical protein CNBE0960 [Crypto... 349 7e-95
gi|49075976|ref|XP_402012.1| hypothetical protein UM04397.1 [Ust... 340 3e-92
gi|23954104|emb|CAC80068.1| transportin [Arabidopsis thaliana] 340 4e-92
gi|30679820|ref|NP_179287.2| importin beta-2 subunit family prot... 340 4e-92
gi|38567827|emb|CAE05776.2| OSJNBb0020J19.5 [Oryza sativa (japon... 327 4e-88
gi|25411759|pir||C84546 probable transportin [imported] - Arabid... 286 5e-76
gi|19115297|ref|NP_594385.1| putative importin beta-2 subunit (t... 283 8e-75
gi|23954314|emb|CAC80069.1| transportin [Oryza sativa] 282 1e-74
gi|21428464|gb|AAM49892.1| LD19058p [Drosophila melanogaster] 281 2e-74
gi|50554935|ref|XP_504876.1| hypothetical protein [Yarrowia lipo... 273 8e-72
gi|49085962|ref|XP_405063.1| hypothetical protein AN0926.2 [Aspe... 262 1e-68
gi|46436579|gb|EAK95939.1| hypothetical protein CaO19.11040 [Can... 260 5e-68
gi|46436514|gb|EAK95875.1| hypothetical protein CaO19.3556 [Cand... 260 5e-68
gi|50418807|ref|XP_457924.1| unnamed protein product [Debaryomyc... 256 1e-66
gi|38109547|gb|EAA55401.1| hypothetical protein MG09208.4 [Magna... 245 1e-63
gi|32404758|ref|XP_322992.1| related to IMPORTIN BETA-2 SUBUNIT ... 239 1e-61
gi|15227336|ref|NP_179288.1| importin beta-2 subunit family prot... 234 2e-60
gi|46109944|ref|XP_382030.1| hypothetical protein FG01854.1 [Gib... 233 5e-60
gi|50290025|ref|XP_447444.1| unnamed protein product [Candida gl... 183 6e-45
gi|6319491|ref|NP_009573.1| Transportin, cytosolic karyopherin b... 179 9e-44
gi|45190822|ref|NP_985076.1| AER219Cp [Eremothecium gossypii] >g... 174 5e-42
gi|50304865|ref|XP_452388.1| unnamed protein product [Kluyveromy... 154 6e-36
gi|47219830|emb|CAF97100.1| unnamed protein product [Tetraodon n... 147 4e-34
gi|46228841|gb|EAK89711.1| importin beta like ARM repeat alpha s... 146 1e-33
gi|50405179|ref|YP_054271.1| Importin, putative [Paramecium tetr... 114 6e-24
gi|23612355|ref|NP_703935.1| transportin [Plasmodium falciparum ... 105 3e-21
gi|17297993|dbj|BAB78507.1| transportin [Plasmodium falciparum] 105 3e-21
gi|23490398|gb|EAA22187.1| transportin-related [Plasmodium yoeli... 102 2e-20
gi|47200030|emb|CAF87397.1| unnamed protein product [Tetraodon n... 88 5e-16
gi|39584602|emb|CAE72355.1| Hypothetical protein CBG19502 [Caeno... 66 2e-09
gi|50550515|ref|XP_502730.1| hypothetical protein [Yarrowia lipo... 50 1e-04
gi|50418405|ref|XP_457778.1| unnamed protein product [Debaryomyc... 44 0.006
gi|13097471|gb|AAH03469.1| Ipo4 protein [Mus musculus] >gnl|BL_O... 40 0.089
gi|19745156|ref|NP_077229.4| RANBP4; EST AA409693; importin 4a [... 40 0.089
gi|34874165|ref|XP_214199.2| similar to RANBP4 [Rattus norvegicus] 40 0.12
gi|49073198|ref|XP_400831.1| hypothetical protein UM03216.1 [Ust... 40 0.12
gi|22330143|ref|NP_175425.2| target of rapamycin protein (TOR) [... 40 0.15
gi|15237894|ref|NP_197204.1| exportin1 (XPO1) [Arabidopsis thali... 39 0.20
gi|23487852|gb|EAA21162.1| putative impotin alpha 1b [Plasmodium... 39 0.20
gi|29247556|gb|EAA39115.1| GLP_305_41443_37988 [Giardia lamblia ... 39 0.20
gi|6714425|gb|AAF26113.1| putative exportin1 (XPO1) protein [Ara... 39 0.20
gi|50425791|ref|XP_461492.1| unnamed protein product [Debaryomyc... 39 0.20
gi|30678764|ref|NP_566193.2| exportin 1, putative [Arabidopsis t... 39 0.20
gi|14250864|emb|CAC39223.1| exportin 1b [Arabidopsis thaliana] 39 0.20
gi|48097940|ref|XP_393927.1| similar to ENSANGP00000013260 [Apis... 39 0.26
gi|7487507|pir||T05869 hypothetical protein T29A15.130 - Arabido... 39 0.26
gi|50302959|ref|XP_451417.1| unnamed protein product [Kluyveromy... 39 0.26
gi|22328982|ref|NP_194494.2| importin beta-2 subunit family prot... 39 0.26
gi|34902110|ref|NP_912401.1| unknown protein [Oryza sativa (japo... 38 0.57
gi|50555395|ref|XP_505106.1| hypothetical protein [Yarrowia lipo... 37 1.3
gi|31543051|ref|NP_032405.2| karyopherin (importin) beta 1; impo... 36 1.7
gi|2137601|pir||S66288 nuclear pore-targeting complex protein, 9... 36 1.7
gi|23612892|ref|NP_704431.1| importin alpha, putative [Plasmodiu... 36 1.7
gi|30931411|gb|AAH52711.1| Karyopherin (importin) beta 1 [Mus mu... 36 2.2
gi|31197643|ref|XP_307769.1| ENSANGP00000012932 [Anopheles gambi... 35 2.9
gi|5107666|pdb|1QGK|A Chain A, Structure Of Importin Beta Bound ... 35 2.9
gi|19923142|ref|NP_002256.2| karyopherin beta 1; nuclear factor ... 35 2.9
gi|25991146|emb|CAD53275.1| variable surface glycoprotein, possi... 35 2.9
gi|39595871|emb|CAE67374.1| Hypothetical protein CBG12850 [Caeno... 35 4.9
gi|31199733|ref|XP_308814.1| ENSANGP00000021619 [Anopheles gambi... 34 6.4
gi|50425533|ref|XP_461362.1| unnamed protein product [Debaryomyc... 34 6.4
gi|17540124|ref|NP_501227.1| IMportin Alpha (56.2 kD) (ima-3) [C... 34 6.4
gi|39593624|emb|CAE61916.1| Hypothetical protein CBG05912 [Caeno... 34 6.4
gi|33337499|gb|AAQ13407.1| importin alpha-3 subunit [Caenorhabdi... 34 6.4
gi|6320956|ref|NP_011035.1| Karyopherin beta, mediates nuclear i... 34 6.4
gi|34865276|ref|XP_234236.2| similar to KIAA0423 [Rattus norvegi... 34 6.4
gi|25314886|pir||G88733 protein F32E10.4 [imported] - Caenorhabd... 34 6.4
gi|46127511|ref|XP_388309.1| hypothetical protein FG08133.1 [Gib... 34 6.4
gi|32410355|ref|XP_325658.1| hypothetical protein [Neurospora cr... 34 6.4
gi|13277562|gb|AAH03690.1| IPO4 protein [Homo sapiens] >gnl|BL_O... 34 8.3
gi|44888820|ref|NP_055906.1| KIAA0423 [Homo sapiens] 34 8.3
gi|38105675|gb|EAA52073.1| hypothetical protein MG03668.4 [Magna... 34 8.3
gi|19033563|gb|AAL83632.1| putative Ran binding protein [Oryza s... 34 8.3
gi|20521047|dbj|BAA24853.2| KIAA0423 [Homo sapiens] 34 8.3
gi|34785366|gb|AAH57255.1| KIAA0423 protein [Homo sapiens] 34 8.3
gi|28207883|emb|CAD62595.1| unnamed protein product [Homo sapiens] 34 8.3
gi|7512977|pir||T00057 hypothetical protein KIAA0423 - human (fr... 34 8.3
>gi|17535479|ref|NP_496988.1| IMportin Beta (46.8 kD) (imb-2)
[Caenorhabditis elegans]
gi|7506340|pir||T23949 hypothetical protein R06A4.4b - Caenorhabditis
elegans
gi|3878861|emb|CAB05587.1| C. elegans IMB-2 protein (corresponding
sequence R06A4.4b) [Caenorhabditis elegans]
Length = 419
Score = 846 bits (2185), Expect = 0.0
Identities = 419/419 (100%), Positives = 419/419 (100%)
Frame = +1
Query: 1 MAFQPDQHELEQLLRCSLDGNKKVQEAACSAFATLEEEAGEQLIPFLGEILDQLVKAFQC 180
MAFQPDQHELEQLLRCSLDGNKKVQEAACSAFATLEEEAGEQLIPFLGEILDQLVKAFQC
Sbjct: 1 MAFQPDQHELEQLLRCSLDGNKKVQEAACSAFATLEEEAGEQLIPFLGEILDQLVKAFQC 60
Query: 181 YQAKNLLILYDAIGTLANSVGDALSHPVYVQMLMPPLMEKWERLSDEDKELFPLLECISA 360
YQAKNLLILYDAIGTLANSVGDALSHPVYVQMLMPPLMEKWERLSDEDKELFPLLECISA
Sbjct: 61 YQAKNLLILYDAIGTLANSVGDALSHPVYVQMLMPPLMEKWERLSDEDKELFPLLECISA 120
Query: 361 IVSAMGQSFLPYIQPVFTRCCSLIEKCVQQNQQHIMAPDQVEAPETDFIIVALDLLSGLA 540
IVSAMGQSFLPYIQPVFTRCCSLIEKCVQQNQQHIMAPDQVEAPETDFIIVALDLLSGLA
Sbjct: 121 IVSAMGQSFLPYIQPVFTRCCSLIEKCVQQNQQHIMAPDQVEAPETDFIIVALDLLSGLA 180
Query: 541 ESLPEHMDPLVANSKLVELMLFCSLDVTPDVRQSCFALLGDLTKACPERVLPQSSNFIFF 720
ESLPEHMDPLVANSKLVELMLFCSLDVTPDVRQSCFALLGDLTKACPERVLPQSSNFIFF
Sbjct: 181 ESLPEHMDPLVANSKLVELMLFCSLDVTPDVRQSCFALLGDLTKACPERVLPQSSNFIFF 240
Query: 721 LAQNLDPSKISVCNNAIWALGELALKMGPAMKQFIGPIIEPLIVVINSQQNMQRTLLENT 900
LAQNLDPSKISVCNNAIWALGELALKMGPAMKQFIGPIIEPLIVVINSQQNMQRTLLENT
Sbjct: 241 LAQNLDPSKISVCNNAIWALGELALKMGPAMKQFIGPIIEPLIVVINSQQNMQRTLLENT 300
Query: 901 AITIGRLGQCCGEELAPHISRFVRPCCYSLRNIKDNAEKESAFIGLCNMINMNPVGVLND 1080
AITIGRLGQCCGEELAPHISRFVRPCCYSLRNIKDNAEKESAFIGLCNMINMNPVGVLND
Sbjct: 301 AITIGRLGQCCGEELAPHISRFVRPCCYSLRNIKDNAEKESAFIGLCNMINMNPVGVLND 360
Query: 1081 FIFWCDAIASWTVPTDSLRVLFAGILQSFKQQVGDFNWNNFILQLPPPLRERLSAFYQI 1257
FIFWCDAIASWTVPTDSLRVLFAGILQSFKQQVGDFNWNNFILQLPPPLRERLSAFYQI
Sbjct: 361 FIFWCDAIASWTVPTDSLRVLFAGILQSFKQQVGDFNWNNFILQLPPPLRERLSAFYQI 419
>gi|17535481|ref|NP_496987.1| IMportin Beta (imb-2) [Caenorhabditis
elegans]
gi|7506339|pir||T23948 hypothetical protein R06A4.4a - Caenorhabditis
elegans
gi|3878860|emb|CAB05586.1| C. elegans IMB-2 protein (corresponding
sequence R06A4.4a) [Caenorhabditis elegans]
Length = 883
Score = 822 bits (2123), Expect = 0.0
Identities = 408/410 (99%), Positives = 408/410 (99%)
Frame = +1
Query: 28 LEQLLRCSLDGNKKVQEAACSAFATLEEEAGEQLIPFLGEILDQLVKAFQCYQAKNLLIL 207
L LLRCSLDGNKKVQEAACSAFATLEEEAGEQLIPFLGEILDQLVKAFQCYQAKNLLIL
Sbjct: 474 LANLLRCSLDGNKKVQEAACSAFATLEEEAGEQLIPFLGEILDQLVKAFQCYQAKNLLIL 533
Query: 208 YDAIGTLANSVGDALSHPVYVQMLMPPLMEKWERLSDEDKELFPLLECISAIVSAMGQSF 387
YDAIGTLANSVGDALSHPVYVQMLMPPLMEKWERLSDEDKELFPLLECISAIVSAMGQSF
Sbjct: 534 YDAIGTLANSVGDALSHPVYVQMLMPPLMEKWERLSDEDKELFPLLECISAIVSAMGQSF 593
Query: 388 LPYIQPVFTRCCSLIEKCVQQNQQHIMAPDQVEAPETDFIIVALDLLSGLAESLPEHMDP 567
LPYIQPVFTRCCSLIEKCVQQNQQHIMAPDQVEAPETDFIIVALDLLSGLAESLPEHMDP
Sbjct: 594 LPYIQPVFTRCCSLIEKCVQQNQQHIMAPDQVEAPETDFIIVALDLLSGLAESLPEHMDP 653
Query: 568 LVANSKLVELMLFCSLDVTPDVRQSCFALLGDLTKACPERVLPQSSNFIFFLAQNLDPSK 747
LVANSKLVELMLFCSLDVTPDVRQSCFALLGDLTKACPERVLPQSSNFIFFLAQNLDPSK
Sbjct: 654 LVANSKLVELMLFCSLDVTPDVRQSCFALLGDLTKACPERVLPQSSNFIFFLAQNLDPSK 713
Query: 748 ISVCNNAIWALGELALKMGPAMKQFIGPIIEPLIVVINSQQNMQRTLLENTAITIGRLGQ 927
ISVCNNAIWALGELALKMGPAMKQFIGPIIEPLIVVINSQQNMQRTLLENTAITIGRLGQ
Sbjct: 714 ISVCNNAIWALGELALKMGPAMKQFIGPIIEPLIVVINSQQNMQRTLLENTAITIGRLGQ 773
Query: 928 CCGEELAPHISRFVRPCCYSLRNIKDNAEKESAFIGLCNMINMNPVGVLNDFIFWCDAIA 1107
CCGEELAPHISRFVRPCCYSLRNIKDNAEKESAFIGLCNMINMNPVGVLNDFIFWCDAIA
Sbjct: 774 CCGEELAPHISRFVRPCCYSLRNIKDNAEKESAFIGLCNMINMNPVGVLNDFIFWCDAIA 833
Query: 1108 SWTVPTDSLRVLFAGILQSFKQQVGDFNWNNFILQLPPPLRERLSAFYQI 1257
SWTVPTDSLRVLFAGILQSFKQQVGDFNWNNFILQLPPPLRERLSAFYQI
Sbjct: 834 SWTVPTDSLRVLFAGILQSFKQQVGDFNWNNFILQLPPPLRERLSAFYQI 883
>gi|39582715|emb|CAE65921.1| Hypothetical protein CBG11089
[Caenorhabditis briggsae]
Length = 879
Score = 749 bits (1934), Expect = 0.0
Identities = 368/407 (90%), Positives = 388/407 (94%)
Frame = +1
Query: 28 LEQLLRCSLDGNKKVQEAACSAFATLEEEAGEQLIPFLGEILDQLVKAFQCYQAKNLLIL 207
L LLRCSLD NKKVQEAACSAFATLEEEAGEQLIPFLGEIL+QLVKAFQCYQAKNLLIL
Sbjct: 474 LANLLRCSLDSNKKVQEAACSAFATLEEEAGEQLIPFLGEILEQLVKAFQCYQAKNLLIL 533
Query: 208 YDAIGTLANSVGDALSHPVYVQMLMPPLMEKWERLSDEDKELFPLLECISAIVSAMGQSF 387
YDAIGTLANSVG+ALSHP YVQMLMPPLMEKWERL+ EDKELFPLLECISAIVSAMGQSF
Sbjct: 534 YDAIGTLANSVGEALSHPHYVQMLMPPLMEKWERLN-EDKELFPLLECISAIVSAMGQSF 592
Query: 388 LPYIQPVFTRCCSLIEKCVQQNQQHIMAPDQVEAPETDFIIVALDLLSGLAESLPEHMDP 567
+PYIQPVFTRCC+LIEKCVQQNQQH+M+P+ VEAPETDFIIVALDLLSGLAESLP+HM P
Sbjct: 593 IPYIQPVFTRCCNLIEKCVQQNQQHLMSPETVEAPETDFIIVALDLLSGLAESLPDHMPP 652
Query: 568 LVANSKLVELMLFCSLDVTPDVRQSCFALLGDLTKACPERVLPQSSNFIFFLAQNLDPSK 747
LV NSKL+ELMLFCS+DVT DVRQSCFALLGDLTKACPERVL QSSNFIFFLAQNLDP+K
Sbjct: 653 LVTNSKLIELMLFCSMDVTTDVRQSCFALLGDLTKACPERVLIQSSNFIFFLAQNLDPTK 712
Query: 748 ISVCNNAIWALGELALKMGPAMKQFIGPIIEPLIVVINSQQNMQRTLLENTAITIGRLGQ 927
ISVCNNAIWALGEL+LKMGPAMKQF+GPI EPLI VIN+QQNMQRTLLENTAITIGRLGQ
Sbjct: 713 ISVCNNAIWALGELSLKMGPAMKQFVGPITEPLIAVINTQQNMQRTLLENTAITIGRLGQ 772
Query: 928 CCGEELAPHISRFVRPCCYSLRNIKDNAEKESAFIGLCNMINMNPVGVLNDFIFWCDAIA 1107
CGEELAPHISRF+RPCCYSLRNIKDN EKESAFIGLCNMINMNPVGVLNDFIFWCDAIA
Sbjct: 773 FCGEELAPHISRFIRPCCYSLRNIKDNTEKESAFIGLCNMINMNPVGVLNDFIFWCDAIA 832
Query: 1108 SWTVPTDSLRVLFAGILQSFKQQVGDFNWNNFILQLPPPLRERLSAF 1248
SWT PT++LR LFAGILQSFK QVGD+NWN FI QLPPPLRERL+AF
Sbjct: 833 SWTTPTENLRALFAGILQSFKLQVGDYNWNAFIAQLPPPLRERLTAF 879