Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= R07E5_12
(309 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17554510|ref|NP_497897.1| RNA binding protein like (11.4 kD) ... 153 7e-37
gi|39591628|emb|CAE71205.1| Hypothetical protein CBG18067 [Caeno... 144 6e-34
gi|630727|pir||S43603 RNA binding protein homolog R07E5.12 - Cae... 113 8e-25
gi|42662642|ref|XP_377060.1| similar to 2610030H06Rik protein [H... 52 3e-06
gi|20271438|gb|AAH28317.1| 2610030H06Rik protein [Mus musculus] ... 50 9e-06
gi|20348919|ref|XP_110750.1| RIKEN cDNA 2610030H06 [Mus musculus... 49 2e-05
gi|6651037|gb|AAF22140.1| similar to RNA binding protein [Mus mu... 49 2e-05
gi|23612829|ref|NP_704368.1| hypothetical protein [Plasmodium fa... 38 0.059
gi|42733834|gb|AAS38752.1| similar to Staphylococcus epidermidis... 34 0.86
gi|23508760|ref|NP_701428.1| hypothetical protein [Plasmodium fa... 33 1.5
gi|224420|prf||1103301A transforming growth factor alpha 32 2.5
gi|7428566|pir||WFRT1 transforming growth factor alpha precursor... 32 2.5
gi|12699588|gb|AAG47496.1| brain-derived neurotrophic factor [Cr... 32 2.5
gi|46125937|ref|XP_387522.1| hypothetical protein FG07346.1 [Gib... 32 3.3
gi|10720184|sp|Q9XSY9|OSTP_SHEEP Osteopontin precursor (Bone sia... 32 4.2
gi|47097219|ref|ZP_00234782.1| internalin, putative [Listeria mo... 32 4.2
gi|31201233|ref|XP_309564.1| ENSANGP00000022259 [Anopheles gambi... 31 7.2
gi|34854051|ref|XP_231388.2| similar to DBF4-related protein [Ra... 31 7.2
gi|15646000|ref|NP_208181.1| hypothetical protein HP1390 [Helico... 31 7.2
gi|23619599|ref|NP_705561.1| hypothetical protein [Plasmodium fa... 30 9.5
gi|28829833|gb|AAO52335.1| similar to ZK1128.2.p [Caenorhabditis... 30 9.5
gi|34869040|ref|XP_233112.2| similar to bM410K19.2.2 (novel prot... 30 9.5
gi|49101461|ref|XP_410963.1| hypothetical protein AN6826.2 [Aspe... 30 9.5
gi|42761540|gb|AAS45358.1| similar to Dictyostelium discoideum (... 30 9.5
>gi|17554510|ref|NP_497897.1| RNA binding protein like (11.4 kD)
(3F508) [Caenorhabditis elegans]
gi|25395692|pir||D88428 protein R07E5.12 [imported] -
Caenorhabditis elegans
gi|3878951|emb|CAA83627.1| Hypothetical protein R07E5.12
[Caenorhabditis elegans]
Length = 102
Score = 153 bits (387), Expect = 7e-37
Identities = 82/102 (80%), Positives = 82/102 (80%)
Frame = -1
Query: 309 MXXXXXXXXXTMATLFPNFRDQEVQSAVKNLLTYSLVILIVPLASMFLLKQFFFEGLLGV 130
M TMATLFPNFRDQEVQSAVKNLLTYSLVILIVPLASMFLLKQFFFEGLLGV
Sbjct: 1 MTTSSSSEPSTMATLFPNFRDQEVQSAVKNLLTYSLVILIVPLASMFLLKQFFFEGLLGV 60
Query: 129 SANDALTYSXXXXXXXXXXXLGIWLFAATKQEDRKKRENKQD 4
SANDALTYS LGIWLFAATKQEDRKKRENKQD
Sbjct: 61 SANDALTYSAIIAVVLVHVVLGIWLFAATKQEDRKKRENKQD 102