Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= R107_6
(819 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17554660|ref|NP_499004.1| putative nuclear protein (31.1 kD) ... 452 e-126
gi|17554662|ref|NP_499003.1| putative nuclear protein (31.4 kD) ... 446 e-124
gi|345363|pir||S30875 hypothetical protein R107.5 - Caenorhabdit... 443 e-123
gi|39585028|emb|CAE62679.1| Hypothetical protein CBG06824 [Caeno... 274 1e-72
gi|46130163|ref|ZP_00164915.2| COG1543: Uncharacterized conserve... 35 1.5
gi|9629261|ref|NP_044451.1| envelope protein [Human spumaretrovi... 33 9.7
gi|119421|sp|P14351|ENV_FOAMV ENV polyprotein (Coat polyprotein)... 33 9.7
gi|12841046|dbj|BAB25056.1| unnamed protein product [Mus musculu... 33 9.7
gi|48843615|ref|YP_025188.1| late expression factor-8; lef-8 [Ne... 33 9.7
gi|12845289|dbj|BAB26693.1| unnamed protein product [Mus musculus] 33 9.7
gi|9629130|ref|NP_044281.1| env polyprotein [Human foamy virus] ... 33 9.7
gi|42539128|gb|AAS18585.1| lef-8 [Neodiprion sertifer nucleopoly... 33 9.7
gi|13358870|dbj|BAB33175.1| envelope protein [Feline foamy virus] 33 9.7
>gi|17554660|ref|NP_499004.1| putative nuclear protein (31.1 kD)
(3K142) [Caenorhabditis elegans]
gi|466006|sp|P32743|YNH5_CAEEL Hypothetical protein R107.5 in
chromosome III
gi|25342782|pir||D88546 protein R107.5 [imported] - Caenorhabditis
elegans
gi|3879035|emb|CAA78470.1| Hypothetical protein R107.5a
[Caenorhabditis elegans]
Length = 272
Score = 452 bits (1164), Expect = e-126
Identities = 230/272 (84%), Positives = 230/272 (84%)
Frame = -1
Query: 819 MTQLTXXXXXXXXXXXNLHQPYNFNSHQPPEENHYYVREPNGKRPFPVEFELDMEYVPRT 640
MTQLT NLHQPYNFNSHQPPEENHYYVREPNGKRPFPVEFELDMEYVPRT
Sbjct: 1 MTQLTNFSESFSNQNSNLHQPYNFNSHQPPEENHYYVREPNGKRPFPVEFELDMEYVPRT 60
Query: 639 KRRFDKISACLENFSISNDKPSPINMXXXXXXXXXXXXXXSNFDQCTESTSIPLVVEPDD 460
KRRFDKISACLENFSISNDKPSPINM SNFDQCTESTSIPLVVEPDD
Sbjct: 61 KRRFDKISACLENFSISNDKPSPINMESSSDEEMDEVYDDSNFDQCTESTSIPLVVEPDD 120
Query: 459 EPAVAKKIRLDESIQRYFEKCRQGPIDFLPKPEKLKGNEMVIWQPRILVSPKNDFNMAGR 280
EPAVAKKIRLDESIQRYFEKCRQGPIDFLPKPEKLKGNEMVIWQPRILVSPKNDFNMAGR
Sbjct: 121 EPAVAKKIRLDESIQRYFEKCRQGPIDFLPKPEKLKGNEMVIWQPRILVSPKNDFNMAGR 180
Query: 279 IQEIXXXXXDRVNEEIKTRIIENEGMIDEDTRNETTGIVELGTXXXXXXXXXXXXSPMAS 100
IQEI DRVNEEIKTRIIENEGMIDEDTRNETTGIVELGT SPMAS
Sbjct: 181 IQEIDDEEEDRVNEEIKTRIIENEGMIDEDTRNETTGIVELGTGSDHSDIGSSWSSPMAS 240
Query: 99 PTGSSQIVELDPDSPNSLTNGSVTDEEMMEFE 4
PTGSSQIVELDPDSPNSLTNGSVTDEEMMEFE
Sbjct: 241 PTGSSQIVELDPDSPNSLTNGSVTDEEMMEFE 272