Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= R119_2
(1752 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17508657|ref|NP_490724.1| RNA-binding region RNP-1 (1A841) [C... 1062 0.0
gi|39579990|emb|CAE74203.1| Hypothetical protein CBG21881 [Caeno... 514 e-144
gi|39585865|emb|CAE61279.1| Hypothetical protein CBG05098 [Caeno... 504 e-141
gi|41053977|ref|NP_956219.1| Similar to RIKEN cDNA 1500011D06 ge... 51 8e-05
gi|41351458|gb|AAH65641.1| Zgc:77304 protein [Danio rerio] 50 2e-04
gi|50760097|ref|XP_417899.1| PREDICTED: similar to Putative RNA-... 45 0.004
gi|39588915|emb|CAE69545.1| Hypothetical protein CBG15757 [Caeno... 44 0.016
gi|7023641|dbj|BAA92036.1| unnamed protein product [Homo sapiens] 41 0.10
gi|47682782|gb|AAH70262.1| RNA binding motif protein 7 [Homo sap... 41 0.10
gi|9994185|ref|NP_057174.1| RNA binding motif protein 7 [Homo sa... 41 0.10
gi|34863338|ref|XP_236212.2| similar to RIKEN cDNA 1500011D06 [R... 40 0.18
gi|3218484|emb|CAA19639.1| EG:125H10.1 [Drosophila melanogaster] 40 0.18
gi|45549293|ref|NP_569839.2| CG3777-PB [Drosophila melanogaster]... 40 0.18
gi|27753952|ref|NP_659197.2| RNA binding motif protein 7 [Mus mu... 39 0.30
gi|32493337|gb|AAH54774.1| RNA binding motif protein 7 [Mus musc... 39 0.30
gi|102215|pir||S13497 cAMP-binding protein - slime mold (Dictyos... 39 0.40
gi|115573|sp|P19198|CAP1_DICDI cAMP binding protein CABP1A/CABP1... 39 0.40
gi|28828721|gb|AAO51316.1| similar to Dictyostelium discoideum (... 39 0.40
gi|31197959|ref|XP_307927.1| ENSANGP00000021860 [Anopheles gambi... 39 0.52
gi|28828259|gb|AAO50936.1| similar to Dictyostelium discoideum (... 39 0.52
gi|47218803|emb|CAG02788.1| unnamed protein product [Tetraodon n... 38 0.67
gi|9663767|emb|CAC01237.1| RNA Binding Protein 45 [Nicotiana plu... 38 0.88
gi|27735168|sp|P34122|CAP2_DICDI CABP1-related protein p31/p34 >... 37 1.1
gi|167672|gb|AAA33169.1| CABP1-related polypeptide 37 1.1
gi|39585711|emb|CAE59913.1| Hypothetical protein CBG03398 [Caeno... 37 1.1
gi|50553814|ref|XP_504318.1| hypothetical protein [Yarrowia lipo... 37 1.5
gi|48104057|ref|XP_395705.1| similar to CG18497-PA [Apis mellifera] 37 1.5
gi|46105414|ref|XP_380511.1| hypothetical protein FG00335.1 [Gib... 37 1.5
gi|6321260|ref|NP_011337.1| mRNA binding protein, specifically b... 37 1.5
gi|794145|emb|CAA58660.1| MPT5=HTR1 [Saccharomyces cerevisiae] 37 1.5
gi|48835688|ref|ZP_00292687.1| COG0457: FOG: TPR repeat [Thermob... 37 1.5
gi|730058|sp|P39016|MPT5_YEAST Suppressor protein MPT5 (HTR1 pro... 37 1.5
gi|45384000|ref|NP_990596.1| nucleolin; protein C23 [Gallus gall... 37 2.0
gi|18495789|emb|CAC87892.1| surface protein [Theileria annulata] 37 2.0
gi|9978670|sp|P57052|RBMB_HUMAN Putative RNA-binding protein 11 ... 36 2.6
gi|23491026|gb|EAA22663.1| Drosophila melanogaster CG10354 gene ... 36 2.6
gi|4105681|gb|AAD02494.1| unknown [Oryza sativa] 36 2.6
gi|50553830|ref|XP_504326.1| hypothetical protein [Yarrowia lipo... 36 2.6
gi|4096175|gb|AAD10370.1| early embryogenesis protein [Oryza sat... 36 2.6
gi|17555678|ref|NP_499686.1| RNA binding motif protein like (3O1... 35 4.4
gi|26333183|dbj|BAC30309.1| unnamed protein product [Mus musculus] 35 4.4
gi|480602|pir||S37085 polyadenylate-binding protein - fern (Anem... 35 4.4
gi|34867444|ref|XP_221731.2| similar to RNA binding motif protei... 35 4.4
gi|39930581|ref|NP_938044.1| RNA binding motif protein 11 [Mus m... 35 4.4
gi|45548056|ref|ZP_00188092.1| COG0500: SAM-dependent methyltran... 35 4.4
gi|27804344|gb|AAO22235.1| nucleolin [Cyprinus carpio] 35 5.7
gi|34898566|ref|NP_910629.1| hypothetical protein [Oryza sativa ... 35 7.5
gi|18143624|dbj|BAB79696.1| vitellogenin 1 [Oryzias latipes] 35 7.5
gi|1304062|dbj|BAA12067.1| photolyase [Drosophila melanogaster] 34 9.7
gi|50260599|gb|EAL23252.1| hypothetical protein CNBA3680 [Crypto... 34 9.7
gi|46125673|ref|XP_387390.1| hypothetical protein FG07214.1 [Gib... 34 9.7
gi|46121145|ref|XP_385127.1| hypothetical protein FG04951.1 [Gib... 34 9.7
gi|30695172|ref|NP_191591.2| expressed protein [Arabidopsis thal... 34 9.7
gi|47210698|emb|CAF96067.1| unnamed protein product [Tetraodon n... 34 9.7
>gi|17508657|ref|NP_490724.1| RNA-binding region RNP-1 (1A841)
[Caenorhabditis elegans]
gi|25375616|pir||G87719 protein R119.7 [imported] - Caenorhabditis
elegans
gi|3133013|gb|AAC16433.1| Hypothetical protein R119.7 [Caenorhabditis
elegans]
Length = 583
Score = 1062 bits (2746), Expect = 0.0
Identities = 521/583 (89%), Positives = 521/583 (89%)
Frame = +1
Query: 1 MNGQADRCDRTAYVSGLQPTISDIELFEVFNRVAHVEKVIVRNGAARHALIVFKTVQGLY 180
MNGQADRCDRTAYVSGLQPTISDIELFEVFNRVAHVEKVIVRNGAARHALIVFKTVQGLY
Sbjct: 1 MNGQADRCDRTAYVSGLQPTISDIELFEVFNRVAHVEKVIVRNGAARHALIVFKTVQGLY 60
Query: 181 QVLVNFQGTTLHGRQLHIRPLRESSHANSEAISTMFEKVKHQGNSGNSSYRQEHSFPEYR 360
QVLVNFQGTTLHGRQLHIRPLRESSHANSEAISTMFEKVKHQGNSGNSSYRQEHSFPEYR
Sbjct: 61 QVLVNFQGTTLHGRQLHIRPLRESSHANSEAISTMFEKVKHQGNSGNSSYRQEHSFPEYR 120
Query: 361 NQNPQASSYLPPNPRGHRNSTGCFNXXXXXXXXXXXXXXYNQYNQNKYPNETYPGMTLFD 540
NQNPQASSYLPPNPRGHRNSTGCFN YNQYNQNKYPNETYPGMTLFD
Sbjct: 121 NQNPQASSYLPPNPRGHRNSTGCFNGGGGGYGRRRSAGGYNQYNQNKYPNETYPGMTLFD 180
Query: 541 NHPVQQYSGFNPIDFRFDDYVEGAKRFDNLANLIRSSTPTDPFANYQKPCEXXXXXXXXX 720
NHPVQQYSGFNPIDFRFDDYVEGAKRFDNLANLIRSSTPTDPFANYQKPCE
Sbjct: 181 NHPVQQYSGFNPIDFRFDDYVEGAKRFDNLANLIRSSTPTDPFANYQKPCESTSTSRSRT 240
Query: 721 XXAKDQKHGPPTWKMELQIKKDDXXXXXXXXXTTGQKLSPXXXXXXXXXXXXSEQNADEV 900
AKDQKHGPPTWKMELQIKKDD TTGQKLSP SEQNADEV
Sbjct: 241 NSAKDQKHGPPTWKMELQIKKDDHHHAGGGAATTGQKLSPQQFLAQIAQRQQSEQNADEV 300
Query: 901 AKKKRPNLSVINPSLFYEQYPRTSSPVVYASKSKPSGHYDDKIASPHDPAVLAYSRLRVP 1080
AKKKRPNLSVINPSLFYEQYPRTSSPVVYASKSKPSGHYDDKIASPHDPAVLAYSRLRVP
Sbjct: 301 AKKKRPNLSVINPSLFYEQYPRTSSPVVYASKSKPSGHYDDKIASPHDPAVLAYSRLRVP 360
Query: 1081 QSAFDSLSPIDTDNCSFITKHLGPTTGVKRDLTNDELSDMIVSTGNLRINPTNIDHHDEP 1260
QSAFDSLSPIDTDNCSFITKHLGPTTGVKRDLTNDELSDMIVSTGNLRINPTNIDHHDEP
Sbjct: 361 QSAFDSLSPIDTDNCSFITKHLGPTTGVKRDLTNDELSDMIVSTGNLRINPTNIDHHDEP 420
Query: 1261 APWSPLKRLRAESGSLSTAQVASPEFSPIKPKTMEFHETEDDVFETGPPPTYLSEGNENA 1440
APWSPLKRLRAESGSLSTAQVASPEFSPIKPKTMEFHETEDDVFETGPPPTYLSEGNENA
Sbjct: 421 APWSPLKRLRAESGSLSTAQVASPEFSPIKPKTMEFHETEDDVFETGPPPTYLSEGNENA 480
Query: 1441 EKKCVEQPKINYDDINNSRLPSNSHSAAPNSEKKHFVFPEYPMCRHSSVPSIAHLVGDLS 1620
EKKCVEQPKINYDDINNSRLPSNSHSAAPNSEKKHFVFPEYPMCRHSSVPSIAHLVGDLS
Sbjct: 481 EKKCVEQPKINYDDINNSRLPSNSHSAAPNSEKKHFVFPEYPMCRHSSVPSIAHLVGDLS 540
Query: 1621 DFCPHATADEKMLLDEASSIIENXXXXXXXXXXXXXXXXMLQI 1749
DFCPHATADEKMLLDEASSIIEN MLQI
Sbjct: 541 DFCPHATADEKMLLDEASSIIENTTPAVSTAPAAAPGATMLQI 583