Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= R11G11_14
         (1182 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|10198041|gb|AAG15155.1| nuclear receptor NHR-58 [Caenorhabdit...   784   0.0
gi|17562756|ref|NP_503236.1| nuclear Hormone Receptor (45.6 kD) ...   784   0.0
gi|27885074|gb|AAO26008.1| Nuclear hormone receptor family prote...   666   0.0
gi|39584331|emb|CAE65495.1| Hypothetical protein CBG10465 [Caeno...   385   e-105
gi|25396175|pir||F88931 protein R11G11.1 [imported] - Caenorhabd...   337   3e-91
gi|17566868|ref|NP_503263.1| nuclear Hormone Receptor (45.7 kD) ...   323   6e-87
gi|10198092|gb|AAG15180.1| nuclear receptor NHR-90 [Caenorhabdit...   323   6e-87
gi|7511174|pir||T32237 hypothetical protein ZK488.2 - Caenorhabd...   313   4e-84
gi|39592705|emb|CAE62319.1| Hypothetical protein CBG06385 [Caeno...   310   6e-83
gi|17561604|ref|NP_507131.1| nuclear receptor NHR-5 family membe...   306   5e-82
gi|17563728|ref|NP_503221.1| nuclear Hormone Receptor (nhr-131) ...   306   5e-82
gi|39581732|emb|CAE71065.1| Hypothetical protein CBG17908 [Caeno...   296   6e-79
gi|37515208|gb|AAB66138.2| Hypothetical protein T27B7.6 [Caenorh...   288   1e-76
gi|17560414|ref|NP_503286.1| c4-type zinc finger nuclear recepto...   277   4e-73
gi|17564778|ref|NP_503626.1| nuclear receptor NHR-115 family mem...   275   2e-72
gi|39584316|emb|CAE65480.1| Hypothetical protein CBG10447 [Caeno...   273   4e-72
gi|39579785|emb|CAE56023.1| Hypothetical protein CBG23582 [Caeno...   273   6e-72
gi|45477009|sp|O16662|N115_CAEEL Nuclear hormone receptor family...   271   2e-71
gi|17563736|ref|NP_503216.1| nuclear Hormone Receptor (51.4 kD) ...   263   6e-69
gi|17564774|ref|NP_503629.1| nuclear Hormone Receptor (nhr-115) ...   263   6e-69
gi|31043906|emb|CAD91709.1| Hypothetical protein Y39B6A.17b [Cae...   263   8e-69
gi|28396048|gb|AAO39187.1| nuclear receptor NHR-95 [Caenorhabdit...   263   8e-69
gi|39581726|emb|CAE71059.1| Hypothetical protein CBG17901 [Caeno...   260   5e-68
gi|17564770|ref|NP_503628.1| nuclear receptor NHR-115 family mem...   257   3e-67
gi|7500257|pir||T32311 hypothetical protein F31F4.12 - Caenorhab...   257   4e-67
gi|37515216|gb|AAC69036.2| Hypothetical protein T19H12.8 [Caenor...   250   5e-65
gi|25396273|pir||E88968 protein T27B7.4 [imported] - Caenorhabdi...   250   5e-65
gi|39581730|emb|CAE71063.1| Hypothetical protein CBG17906 [Caeno...   249   7e-65
gi|17564772|ref|NP_503630.1| nuclear receptor NHR-115 family mem...   249   7e-65
gi|17560848|ref|NP_503621.1| nuclear receptor NHR-5 family membe...   249   9e-65
gi|39588620|emb|CAE58144.1| Hypothetical protein CBG01233 [Caeno...   249   1e-64
gi|39584317|emb|CAE65481.1| Hypothetical protein CBG10448 [Caeno...   247   3e-64
gi|39587341|emb|CAE74995.1| Hypothetical protein CBG22888 [Caeno...   243   8e-63
gi|17564450|ref|NP_504307.1| nuclear receptor NHR-115 family mem...   242   1e-62
gi|39588625|emb|CAE58149.1| Hypothetical protein CBG01239 [Caeno...   241   2e-62
gi|17560846|ref|NP_503620.1| nuclear receptor NHR-55 family memb...   241   2e-62
gi|39588734|emb|CAE58258.1| Hypothetical protein CBG01359 [Caeno...   241   2e-62
gi|17562750|ref|NP_503215.1| nuclear Hormone Receptor (nhr-55) [...   241   3e-62
gi|28396024|gb|AAO39175.1| nuclear receptor NHR-55 [Caenorhabdit...   241   3e-62
gi|17562630|ref|NP_503214.1| nuclear Hormone Receptor (nhr-99) [...   240   4e-62
gi|45477160|sp|Q966I0|NH98_CAEEL Nuclear hormone receptor family...   238   2e-61
gi|39579802|emb|CAE56186.1| Hypothetical protein CBG23808 [Caeno...   238   3e-61
gi|33300481|emb|CAE17952.1| Hypothetical protein Y17D7A.3b [Caen...   236   1e-60
gi|34610381|gb|AAG24182.2| Hypothetical protein T01G6.6 [Caenorh...   234   2e-60
gi|39587334|emb|CAE74988.1| Hypothetical protein CBG22881 [Caeno...   234   2e-60
gi|39588730|emb|CAE58254.1| Hypothetical protein CBG01355 [Caeno...   233   5e-60
gi|39588622|emb|CAE58146.1| Hypothetical protein CBG01235 [Caeno...   233   7e-60
gi|39587312|emb|CAE74966.1| Hypothetical protein CBG22857 [Caeno...   232   1e-59
gi|17560944|ref|NP_503607.1| nuclear Hormone Receptor (nhr-103) ...   232   1e-59
gi|25815069|emb|CAD31815.2| Hypothetical protein Y39B6A.17a [Cae...   230   6e-59
gi|39588634|emb|CAE58158.1| Hypothetical protein CBG01248 [Caeno...   230   6e-59
gi|17560950|ref|NP_503602.1| nuclear Hormone Receptor (46.8 kD) ...   229   9e-59
gi|15145354|gb|AAB65893.2| Nuclear hormone receptor family prote...   229   1e-58
gi|50470805|emb|CAB60441.2| Hypothetical protein Y80D3A.4 [Caeno...   229   1e-58
gi|17562762|ref|NP_507680.1| nuclear Hormone Receptor (46.8 kD) ...   228   2e-58
gi|32566606|ref|NP_503605.2| nuclear Hormone Receptor (46.9 kD) ...   228   2e-58
gi|10198035|gb|AAG15152.1| nuclear receptor NHR-56 [Caenorhabdit...   228   2e-58
gi|17565212|ref|NP_503622.1| predicted CDS, nuclear receptor NHR...   228   2e-58
gi|39592699|emb|CAE62313.1| Hypothetical protein CBG06378 [Caeno...   228   3e-58
gi|39588636|emb|CAE58160.1| Hypothetical protein CBG01250 [Caeno...   228   3e-58
gi|10198033|gb|AAG15151.1| nuclear receptor NHR-55 [Caenorhabdit...   227   4e-58
gi|17563140|ref|NP_503231.1| nuclear receptor NHR-115 family mem...   226   6e-58
gi|39588727|emb|CAE58251.1| Hypothetical protein CBG01352 [Caeno...   225   2e-57
gi|17563734|ref|NP_503217.1| nuclear receptor NHR-115 family mem...   224   3e-57
gi|17563732|ref|NP_503218.1| nuclear receptor NHR-5 family membe...   223   7e-57
gi|17566286|ref|NP_507686.1| nuclear receptor NHR-5 family membe...   223   9e-57
gi|39588621|emb|CAE58145.1| Hypothetical protein CBG01234 [Caeno...   221   3e-56
gi|25148514|ref|NP_503207.2| nuclear Hormone Receptor (nhr-123) ...   220   4e-56
gi|25154162|ref|NP_503624.2| nuclear Hormone Receptor (47.7 kD) ...   219   1e-55
gi|25154152|ref|NP_503608.2| nuclear Hormone Receptor (45.3 kD) ...   218   2e-55
gi|11359799|pir||T43356 nuclear receptor NHR-18 - Caenorhabditis...   218   2e-55
gi|32566256|ref|NP_741680.2| nuclear Hormone Receptor (nhr-95) [...   218   2e-55
gi|10198105|gb|AAG15186.1| nuclear receptor NHR-95 [Caenorhabdit...   218   2e-55
gi|39588630|emb|CAE58154.1| Hypothetical protein CBG01244 [Caeno...   217   5e-55
gi|25146505|ref|NP_504194.2| nuclear Hormone Receptor, and predi...   216   6e-55
gi|7503362|pir||T31792 hypothetical protein F44C8.3 - Caenorhabd...   216   8e-55
gi|25155115|ref|NP_503609.2| nuclear Hormone Receptor (46.2 kD) ...   216   8e-55
gi|39588627|emb|CAE58151.1| Hypothetical protein CBG01241 [Caeno...   212   1e-53
gi|39588640|emb|CAE58164.1| Hypothetical protein CBG01254 [Caeno...   212   2e-53
gi|34146986|gb|AAQ62455.1| Hypothetical protein F44C8.9a [Caenor...   211   2e-53
gi|17560940|ref|NP_503610.1| nuclear Hormone Receptor (47.1 kD) ...   210   5e-53
gi|17560952|ref|NP_503603.1| nuclear receptor NHR-5 family membe...   209   8e-53
gi|39588637|emb|CAE58161.1| Hypothetical protein CBG01251 [Caeno...   209   1e-52
gi|7506889|pir||T32193 hypothetical protein T01G6.4 - Caenorhabd...   208   2e-52
gi|7503364|pir||T31790 hypothetical protein F44C8.5 - Caenorhabd...   208   2e-52
gi|17563730|ref|NP_503219.1| nuclear Hormone Receptor (43.9 kD) ...   207   3e-52
gi|39587328|emb|CAE74982.1| Hypothetical protein CBG22875 [Caeno...   207   3e-52
gi|32566240|ref|NP_503237.2| nuclear Hormone Receptor (31.6 kD) ...   207   5e-52
gi|7503361|pir||T31793 hypothetical protein F44C8.2 - Caenorhabd...   206   1e-51
gi|39588626|emb|CAE58150.1| Hypothetical protein CBG01240 [Caeno...   204   2e-51
gi|17562634|ref|NP_503211.1| nuclear receptor NHR-55 family memb...   204   3e-51
gi|7503363|pir||T31791 hypothetical protein F44C8.4 - Caenorhabd...   201   2e-50
gi|39588732|emb|CAE58256.1| Hypothetical protein CBG01357 [Caeno...   197   3e-49
gi|39588632|emb|CAE58156.1| Hypothetical protein CBG01246 [Caeno...   197   3e-49
gi|39588629|emb|CAE58153.1| Hypothetical protein CBG01243 [Caeno...   197   3e-49
gi|39588615|emb|CAE58139.1| Hypothetical protein CBG01227 [Caeno...   194   3e-48
gi|39588728|emb|CAE58252.1| Hypothetical protein CBG01353 [Caeno...   194   3e-48
gi|17562636|ref|NP_503210.1| nuclear receptor NHR-55 family memb...   194   4e-48
gi|34146970|gb|AAG24130.2| Hypothetical protein F48G7.11 [Caenor...   192   1e-47
gi|7503365|pir||T31789 hypothetical protein F44C8.6 - Caenorhabd...   189   1e-46
gi|17565252|ref|NP_507682.1| nuclear receptor NHR-55 family memb...   187   5e-46
gi|45477159|sp|Q95X91|NH96_CAEEL Nuclear hormone receptor family...   186   9e-46
gi|37515231|gb|AAG24145.2| Hypothetical protein F59E11.11 [Caeno...   179   9e-44
gi|17562736|ref|NP_505313.1| nuclear Hormone Receptor (nhr-44) [...   177   3e-43
gi|10197999|gb|AAG15134.1| nuclear receptor NHR-44 [Caenorhabdit...   177   3e-43
gi|17561182|ref|NP_503276.1| nuclear receptor NHR-5 family membe...   172   1e-41
gi|10198061|gb|AAG15165.1| nuclear receptor NHR-65 [Caenorhabdit...   171   4e-41
gi|17561766|ref|NP_505317.1| nuclear receptor family member (5J4...   170   5e-41
gi|17562638|ref|NP_503209.1| nuclear receptor NHR-55 family memb...   168   2e-40
gi|7503774|pir||T28748 hypothetical protein F48G7.11 - Caenorhab...   166   8e-40
gi|37515217|gb|AAQ91898.1| Hypothetical protein T20C7.2 [Caenorh...   166   1e-39
gi|17566866|ref|NP_503264.1| nuclear receptor NHR-115 family mem...   164   3e-39
gi|39594479|emb|CAE72057.1| Hypothetical protein CBG19143 [Caeno...   164   4e-39
gi|7504562|pir||T22875 hypothetical protein F57G8.6 - Caenorhabd...   163   8e-39
gi|39594478|emb|CAE72056.1| Hypothetical protein CBG19142 [Caeno...   163   8e-39
gi|17564776|ref|NP_503627.1| nuclear receptor NHR-115 family mem...   163   8e-39
gi|39588616|emb|CAE58140.1| Hypothetical protein CBG01229 [Caeno...   162   1e-38
gi|17564384|ref|NP_505314.1| nuclear Hormone Receptor (nhr-44) [...   162   2e-38
gi|39588633|emb|CAE58157.1| Hypothetical protein CBG01247 [Caeno...   158   2e-37
gi|17562770|ref|NP_503272.1| nuclear Hormone Receptor (nhr-83) [...   157   6e-37
gi|25396283|pir||B88969 protein T27B7.1 [imported] - Caenorhabdi...   155   2e-36
gi|25148710|ref|NP_741511.1| nuclear Hormone Receptor (50.8 kD) ...   154   5e-36
gi|17561764|ref|NP_505316.1| nuclear receptor NHR-110 family mem...   154   5e-36
gi|17561762|ref|NP_505315.1| nuclear receptor NHR-55 family memb...   153   7e-36
gi|7509150|pir||T26290 hypothetical protein W08G11.2 - Caenorhab...   152   1e-35
gi|7503778|pir||T28744 hypothetical protein F48G7.3 - Caenorhabd...   151   3e-35
gi|39592706|emb|CAE62320.1| Hypothetical protein CBG06387 [Caeno...   150   6e-35
gi|39581723|emb|CAE71056.1| Hypothetical protein CBG17898 [Caeno...   149   1e-34
gi|17558054|ref|NP_504080.1| nuclear receptor NHR-115 family mem...   149   2e-34
gi|17559772|ref|NP_503457.1| nuclear hormone receptor family pro...   149   2e-34
gi|7499231|pir||T32674 hypothetical protein F16B4.12 - Caenorhab...   148   2e-34
gi|39592895|emb|CAE62509.1| Hypothetical protein CBG06614 [Caeno...   148   2e-34
gi|39584328|emb|CAE65492.1| Hypothetical protein CBG10462 [Caeno...   145   1e-33
gi|39594480|emb|CAE72058.1| Hypothetical protein CBG19144 [Caeno...   145   2e-33
gi|17559752|ref|NP_503455.1| nuclear hormone receptor family pro...   140   8e-32
gi|10198031|gb|AAG15150.1| nuclear receptor NHR-55 [Caenorhabdit...   138   3e-31
gi|32566252|ref|NP_503611.2| nuclear Hormone Receptor (nhr-96) [...   137   6e-31
gi|37515234|gb|AAG24144.2| Hypothetical protein F59E11.8 [Caenor...   136   1e-30
gi|17563982|ref|NP_506974.1| nuclear receptor NHR-102 family mem...   135   2e-30
gi|13274571|gb|AAK17984.1| nuclear receptor NHR-99 [Caenorhabdit...   134   3e-30
gi|32566250|ref|NP_503208.2| nuclear Hormone Receptor (nhr-98) [...   132   2e-29
gi|11359771|pir||T45030 hypothetical protein Y39B6B.d [imported]...   131   4e-29
gi|38175986|gb|AAM45373.2| Hypothetical protein F44E7.8 [Caenorh...   128   3e-28
gi|28396073|gb|AAO39199.1| nuclear receptor NHR-110 [Caenorhabdi...   128   3e-28
gi|33620959|gb|AAB94240.2| Hypothetical protein F16B4.9 [Caenorh...   128   3e-28
gi|17565816|ref|NP_503459.1| nuclear Hormone Receptor (nhr-110) ...   127   4e-28
gi|39587324|emb|CAE74978.1| Hypothetical protein CBG22870 [Caeno...   127   7e-28
gi|39592892|emb|CAE62506.1| Hypothetical protein CBG06611 [Caeno...   126   9e-28
gi|17559768|ref|NP_503454.1| nuclear receptor NHR-102 family mem...   126   9e-28
gi|30025076|gb|AAK72308.2| Nuclear hormone receptor family prote...   125   2e-27
gi|25148715|ref|NP_741512.1| nuclear Hormone Receptor (55.6 kD) ...   124   3e-27
gi|39594477|emb|CAE72055.1| Hypothetical protein CBG19141 [Caeno...   123   7e-27
gi|50507800|emb|CAB03998.2| Hypothetical protein C54E10.5 [Caeno...   123   1e-26
gi|17367991|sp|O45460|NH54_CAEEL Nuclear hormone receptor family...   120   6e-26
gi|39579738|emb|CAE56101.1| Hypothetical protein CBG23699 [Caeno...   120   6e-26
gi|39581727|emb|CAE71060.1| Hypothetical protein CBG17903 [Caeno...   119   1e-25
gi|39584332|emb|CAE65496.1| Hypothetical protein CBG10466 [Caeno...   119   1e-25
gi|39592700|emb|CAE62314.1| Hypothetical protein CBG06379 [Caeno...   117   4e-25
gi|17563970|ref|NP_506967.1| nuclear Hormone Receptor (47.8 kD) ...   115   2e-24
gi|17558930|ref|NP_507673.1| nuclear receptor NHR-54 family memb...   115   2e-24
gi|28396054|gb|AAO39190.1| nuclear receptor NHR-102 [Caenorhabdi...   115   2e-24
gi|7506162|pir||T37257 hypothetical protein R02D1.1 - Caenorhabd...   107   4e-22
gi|39591251|emb|CAE73304.1| Hypothetical protein CBG20729 [Caeno...   107   4e-22
gi|39588729|emb|CAE58253.1| Hypothetical protein CBG01354 [Caeno...   106   9e-22
gi|39592890|emb|CAE62504.1| Hypothetical protein CBG06609 [Caeno...   104   4e-21
gi|39587327|emb|CAE74981.1| Hypothetical protein CBG22874 [Caeno...   103   8e-21
gi|32566608|ref|NP_507179.2| nuclear Hormone Receptor (nhr-54) [...   103   1e-20
gi|25149401|ref|NP_741544.1| nuclear receptor NHR-102 like famil...   102   1e-20
gi|39593306|emb|CAE64776.1| Hypothetical protein CBG09567 [Caeno...   102   2e-20
gi|39592880|emb|CAE62494.1| Hypothetical protein CBG06599 [Caeno...    99   1e-19
gi|17565322|ref|NP_505639.1| nuclear receptor NHR-54 family memb...    99   2e-19
gi|17562772|ref|NP_506968.1| nuclear Hormone Receptor (nhr-84) [...    97   7e-19
gi|7504772|pir||T32115 hypothetical protein F59E11.12 - Caenorha...    94   5e-18
gi|39579786|emb|CAE56024.1| Hypothetical protein CBG23583 [Caeno...    92   2e-17
gi|34555917|emb|CAB07671.2| C. elegans NHR-127 protein (correspo...    89   2e-16
gi|28396032|gb|AAO39179.1| nuclear receptor NHR-65 [Caenorhabdit...    89   2e-16
gi|39588631|emb|CAE58155.1| Hypothetical protein CBG01245 [Caeno...    89   3e-16
gi|17565962|ref|NP_507595.1| predicted CDS, nuclear receptor NHR...    88   4e-16
gi|28396056|gb|AAO39191.1| nuclear receptor NHR-103 [Caenorhabdi...    84   5e-15
gi|39580248|emb|CAE69640.1| Hypothetical protein CBG15881 [Caeno...    84   8e-15
gi|17564294|ref|NP_507104.1| nuclear Hormone Receptor (nhr-127) ...    81   4e-14
gi|17564292|ref|NP_507103.1| retinoid x receptor family member (...    80   9e-14
gi|39593100|emb|CAE64569.1| Hypothetical protein CBG09320 [Caeno...    79   2e-13
gi|25354024|pir||B89024 protein R02D1.1 [imported] - Caenorhabdi...    79   3e-13
gi|39587339|emb|CAE74993.1| Hypothetical protein CBG22886 [Caeno...    77   1e-12
gi|17560934|ref|NP_504683.1| nuclear receptor NHR-44 like family...    76   1e-12
gi|39582199|emb|CAE64150.1| Hypothetical protein CBG08768 [Caeno...    76   2e-12
gi|17565250|ref|NP_507681.1| nuclear receptor NHR-18 family memb...    75   3e-12
gi|34146987|gb|AAQ62456.1| Hypothetical protein F44C8.9b [Caenor...    74   5e-12
gi|37515223|gb|AAG24198.2| Hypothetical protein T09D3.4 [Caenorh...    73   1e-11
gi|17565256|ref|NP_507672.1| nuclear receptor NHR-54 family memb...    72   3e-11
gi|39592882|emb|CAE62496.1| Hypothetical protein CBG06601 [Caeno...    70   7e-11
gi|32566292|ref|NP_508797.2| nuclear Hormone Receptor (nhr-45) [...    69   2e-10
gi|7499268|pir||T16082 hypothetical protein F16H11.5 - Caenorhab...    69   2e-10
gi|50470812|emb|CAC51060.2| Hypothetical protein Y39B6A.47 [Caen...    69   2e-10
gi|25151588|ref|NP_741681.1| nucleoporin 210 family member (5T56...    69   2e-10
gi|39597936|emb|CAE68628.1| Hypothetical protein CBG14515 [Caeno...    69   2e-10
gi|39594339|emb|CAE71917.1| Hypothetical protein CBG18980 [Caeno...    68   4e-10
gi|39591250|emb|CAE73303.1| Hypothetical protein CBG20727 [Caeno...    65   2e-09
gi|39590164|emb|CAE61162.1| Hypothetical protein CBG04928 [Caeno...    59   3e-07
gi|17564138|ref|NP_504427.1| nuclear receptor NHR-54 family memb...    58   4e-07
gi|39590165|emb|CAE61163.1| Hypothetical protein CBG04929 [Caeno...    58   5e-07
gi|17558210|ref|NP_505343.1| nuclear receptor NHR-102 like famil...    55   2e-06
gi|39579737|emb|CAE56100.1| Hypothetical protein CBG23698 [Caeno...    55   3e-06
gi|39579736|emb|CAE56099.1| Hypothetical protein CBG23697 [Caeno...    54   7e-06
gi|39587326|emb|CAE74980.1| Hypothetical protein CBG22872 [Caeno...    51   5e-05
gi|39593168|emb|CAE64637.1| Hypothetical protein CBG09399 [Caeno...    51   5e-05
gi|10198014|gb|AAG15141.1| nuclear receptor NHR-49 [Caenorhabdit...    45   0.003
gi|32563635|ref|NP_871798.1| nuclear Hormone Receptor (55.4 kD) ...    45   0.003
gi|17508457|ref|NP_492612.1| nuclear Hormone Receptor (52.5 kD) ...    45   0.003
gi|15489203|gb|AAH13709.1| Rarg protein [Mus musculus]                 45   0.003
gi|13274556|gb|AAK17977.1| nuclear receptor NHR-49 [Caenorhabdit...    45   0.003
gi|32563637|ref|NP_871799.1| nuclear Hormone Receptor (nhr-49) [...    45   0.003
gi|17508459|ref|NP_492613.1| nuclear Hormone Receptor (52.4 kD) ...    45   0.003
gi|10198018|gb|AAG15143.1| nuclear receptor NHR-49 [Caenorhabdit...    45   0.003
gi|39595230|emb|CAE60267.1| Hypothetical protein CBG03844 [Caeno...    45   0.003
gi|25149398|ref|NP_504518.2| nuclear receptor NHR-102 family mem...    45   0.004
gi|31249888|gb|AAB65892.3| Nuclear hormone receptor family prote...    45   0.004
gi|32566242|ref|NP_503606.2| nuclear Hormone Receptor (nhr-128) ...    45   0.004
gi|18031837|gb|AAL02362.1| retinoic acid receptor gamma-2 [Mesoc...    44   0.007
gi|39594023|emb|CAE70133.1| Hypothetical protein CBG16594 [Caeno...    44   0.007
gi|6433866|emb|CAB60726.1| retinoic acid receptor [Homo sapiens]       44   0.007
gi|21629462|gb|AAM69090.1| Nuclear hormone receptor family prote...    44   0.010
gi|40353037|gb|AAH64524.1| Unknown (protein for IMAGE:5738222) [...    44   0.010
gi|39583189|emb|CAE61407.1| Hypothetical protein CBG05270 [Caeno...    44   0.010
gi|133500|sp|P22932|RRG2_HUMAN Retinoic acid receptor gamma-2 (R...    44   0.010
gi|33879052|gb|AAH19098.2| RARG protein [Homo sapiens]                 44   0.010
gi|31560805|ref|NP_035374.2| retinoic acid receptor, gamma; RAR ...    44   0.010
gi|7441781|pir||A34714 retinoic acid receptor gamma-1 - mouse >g...    44   0.010
gi|47938910|gb|AAH72462.1| RARG protein [Homo sapiens]                 44   0.010
gi|25150325|ref|NP_741729.1| nuclear Hormone Receptor (50.6 kD) ...    44   0.010
gi|27808670|sp|Q22127|NH40_CAEEL Nuclear hormone receptor family...    44   0.010
gi|4506423|ref|NP_000957.1| retinoic acid receptor, gamma; retin...    44   0.010
gi|133501|sp|P20787|RRG2_MOUSE Retinoic acid receptor gamma-B (R...    44   0.010
gi|28396089|gb|AAO39206.1| nuclear receptor NHR-117 [Caenorhabdi...    43   0.013
gi|34864303|ref|XP_217192.2| similar to nuclear orphan receptor/...    43   0.013
gi|47225829|emb|CAF98309.1| unnamed protein product [Tetraodon n...    43   0.013
gi|1619314|emb|CAA69930.1| nuclear orphan receptor ROR-alpha 4 [...    43   0.013
gi|19743903|ref|NP_599023.1| RAR-related orphan receptor A isofo...    43   0.013
gi|7305439|ref|NP_038674.1| RAR-related orphan receptor alpha [M...    43   0.013
gi|19743901|ref|NP_599022.1| RAR-related orphan receptor A isofo...    43   0.013
gi|2570170|dbj|BAA22970.1| mROR4 [Mus caroli] >gnl|BL_ORD_ID|161...    43   0.013
gi|1869971|emb|CAB05396.1| nuclear orphan receptor/transcription...    43   0.013
gi|1082764|pir||A56856 retinoid-related orphan receptor RZR-alph...    43   0.013
gi|19743905|ref|NP_599024.1| RAR-related orphan receptor A isofo...    43   0.013
gi|4506577|ref|NP_002934.1| RAR-related orphan receptor A isofor...    43   0.013
gi|39592119|emb|CAE75339.1| Hypothetical protein CBG23319 [Caeno...    43   0.016
gi|22219446|ref|NP_671743.1| nuclear receptor subfamily 1, group...    43   0.016
gi|1173170|sp|P18516|RRG_NOTVI Retinoic acid receptor gamma (RAR...    42   0.021
gi|7506532|pir||T28881 hypothetical protein R09G11.2 - Caenorhab...    42   0.021
gi|8895462|gb|AAF80975.1| retonoic acid receptor gamma 2 [Ambyst...    42   0.021
gi|24308525|ref|NP_571414.1| retinoic acid receptor gamma; etID3...    42   0.021
gi|25147899|ref|NP_510834.2| nuclear Hormone Receptor (nhr-1) [C...    42   0.021
gi|39598310|emb|CAE69003.1| Hypothetical protein CBG14996 [Caeno...    42   0.021
gi|31249880|gb|AAP46279.1| Nuclear hormone receptor family prote...    42   0.021
gi|215028|gb|AAB59953.1| retinoic acid receptor gamma-2                42   0.021
gi|1843450|emb|CAA49562.1| largest of the predicted retinoic aci...    42   0.021
gi|28396008|gb|AAO39167.1| nuclear receptor NHR-1 [Caenorhabditi...    42   0.021
gi|85682|pir||S06124 retinoic acid receptor delta - eastern newt...    42   0.021
gi|25152449|ref|NP_510201.2| nuclear Hormone Receptor (nhr-32) [...    42   0.028
gi|28396020|gb|AAO39173.1| nuclear receptor NHR-32 [Caenorhabdit...    42   0.028
gi|34868575|ref|XP_217064.2| similar to retinoic acid receptor g...    42   0.028
gi|7505608|pir||T23520 hypothetical protein K08H2.8 - Caenorhabd...    42   0.028
gi|39590909|emb|CAE58689.1| Hypothetical protein CBG01866 [Caeno...    42   0.028
gi|47228660|emb|CAG07392.1| unnamed protein product [Tetraodon n...    42   0.037
gi|41055082|ref|NP_957361.1| similar to RAR-related orphan recep...    42   0.037
gi|28396052|gb|AAO39189.1| nuclear receptor NHR-101 [Caenorhabdi...    42   0.037
gi|28396087|gb|AAO39205.1| nuclear receptor NHR-116 [Caenorhabdi...    42   0.037
gi|226404|prf||1510302C retinoic acid receptor gamma                   42   0.037
gi|32566258|ref|NP_504989.2| nuclear Hormone Receptor (nhr-94) [...    42   0.037
gi|17559420|ref|NP_507273.1| nuclear Hormone Receptor (nhr-116) ...    42   0.037
gi|17557682|ref|NP_506854.1| nuclear receptor NHR-107 family mem...    42   0.037
gi|28396018|gb|AAO39172.1| nuclear receptor NHR-10 [Caenorhabdit...    42   0.037
gi|17554350|ref|NP_498554.1| nuclear Hormone Receptor (44.9 kD) ...    42   0.037
gi|32566248|ref|NP_505935.2| nuclear Hormone Receptor (45.2 kD) ...    42   0.037
gi|8895460|gb|AAF80974.1| retinoic acid receptor gamma 1 [Ambyst...    41   0.048
gi|29351682|gb|AAH49301.1| Rara2b protein [Danio rerio]                41   0.048
gi|34555901|emb|CAB05521.2| C. elegans NHR-111 protein (correspo...    41   0.048
gi|17560984|ref|NP_507060.1| nuclear Hormone Receptor (nhr-111) ...    41   0.048
gi|39594791|emb|CAE70659.1| Hypothetical protein CBG17366 [Caeno...    41   0.048
gi|133495|sp|P18515|RRB_NOTVI RETINOIC ACID RECEPTOR BETA (RAR-B...    41   0.048
gi|14627168|gb|AAG60685.2| peroxisome proliferator activated rec...    41   0.048
gi|226278|prf||1504304A retinoic acid receptor                         41   0.048
gi|215026|gb|AAA50050.1| retinoic acid receptor alpha-2.B              41   0.048
gi|44888978|sp|O02151|NH14_CAEEL Nuclear hormone receptor family...    41   0.062
gi|25513780|pir||H89591 protein T01B10.4 [imported] - Caenorhabd...    41   0.062
gi|30025114|gb|AAP13776.1| Nuclear hormone receptor family prote...    41   0.062
gi|25150304|ref|NP_741860.1| nuclear Hormone Receptor (nhr-14) [...    41   0.062
gi|225832|prf||1314259A retinoic acid receptor                         41   0.062
gi|104175|pir||A38592 retinoic acid receptor gamma-2 - African c...    41   0.062
gi|1839486|gb|AAB47115.1| retinoic acid receptor gamma isoform 2...    41   0.062
gi|1839488|gb|AAB47116.1| retinoic acid receptor gamma isoform 2...    41   0.062
gi|25150309|ref|NP_741861.1| nuclear Hormone Receptor (nhr-14) [...    41   0.062
gi|28558767|sp|P28699|RRG_XENLA Retinoic acid receptor gamma (RA...    41   0.062
gi|7110506|gb|AAF36970.1| nuclear receptor 3 [Aedes aegypti]           41   0.062
gi|643611|gb|AAA62110.1| PPAR gamma                                    41   0.062
gi|39583834|emb|CAE74907.1| Hypothetical protein CBG22776 [Caeno...    41   0.062
gi|1743345|emb|CAA71177.1| retinoic acid receptor-alpha [Mus spr...    40   0.081
gi|4506419|ref|NP_000955.1| retinoic acid receptor, alpha; Retin...    40   0.081
gi|4160009|gb|AAD05222.1| retinoic acid receptor alpha [Homo sap...    40   0.081
gi|283822|pir||A41977 retinoic acid receptor alpha - African cla...    40   0.081
gi|62977|emb|CAA40616.1| retinoic acid receptor beta [Gallus gal...    40   0.081
gi|13928712|ref|NP_113716.1| retinoic acid receptor, alpha [Ratt...    40   0.081
gi|2119680|pir||B56558 retinoic acid receptor isoform alpha 2.2 ...    40   0.081
gi|190125|gb|AAA60126.1| PML-RAR protein                               40   0.081
gi|280730|pir||A43786 retinoic acid receptor beta-4 - chicken >g...    40   0.081
gi|62979|emb|CAA40615.1| retinoic acid receptor beta,isoform 4 [...    40   0.081
gi|2119679|pir||A56558 retinoic acid receptor isoform alpha 2.1 ...    40   0.081
gi|9955273|pdb|1DSZ|A Chain A, Structure Of The RxrRAR DNA-Bindi...    40   0.081
gi|2661447|emb|CAA05768.1| retinoic acid receptor alpha2 [Rattus...    40   0.081
gi|22859106|emb|CAA55132.1| retinoic acid receptor alpha isoform...    40   0.081
gi|2661445|emb|CAA05767.1| retinoic acid receptor alpha1 [Rattus...    40   0.081
gi|7638251|gb|AAF65452.1| ECFP-retinoic acid receptor alpha fusi...    40   0.081
gi|1710711|sp|P51126|RRA_XENLA Retinoic acid receptor alpha (RAR...    40   0.081
gi|133488|sp|P18514|RRA_NOTVI Retinoic acid receptor alpha (RAR-...    40   0.081
gi|1314308|gb|AAB00112.1| nucleophosmin-retinoic acid receptor a...    40   0.081
gi|8815561|gb|AAB19602.2| retinoic acid receptor alpha; RAR alph...    40   0.081
gi|3510458|gb|AAC33511.1| nuclear mitotic apparatus protein-reti...    40   0.081
gi|7441783|pir||S78481 retinoic acid receptor alpha-2 - eastern ...    40   0.081
gi|2119682|pir||I50674 retinoic acid receptor alpha isoform 2-1 ...    40   0.081
gi|17557564|ref|NP_504871.1| nuclear receptor NHR-116 family mem...    40   0.081
gi|234371|gb|AAB19628.1| retinoic acid receptor-beta; RAR-beta [...    40   0.081
gi|35874|emb|CAA29787.1| unnamed protein product [Homo sapiens]        40   0.081
gi|23504267|emb|CAA52153.2| retinoic acid receptor gamma 2 isofo...    40   0.081
gi|45383107|ref|NP_989867.1| retinoic acid receptor alpha 1 isof...    40   0.081
gi|1314310|gb|AAB00113.1| nucleophosmin-retinoic acid receptor a...    40   0.081
gi|545176|gb|AAB29813.1| retinoic acid receptor alpha, RAR alpha...    40   0.081
gi|18031833|gb|AAL02360.1| retinoic acid receptor alpha [Mesocri...    40   0.081
gi|17566224|ref|NP_507231.1| nuclear Hormone Receptor (40.4 kD) ...    40   0.081
gi|17367843|sp|Q9W6B3|RRB_COTJA Retinoic acid receptor beta (RAR...    40   0.081
gi|45384512|ref|NP_990657.1| retinoic acid receptor beta [Gallus...    40   0.081
gi|39583438|emb|CAE66413.1| Hypothetical protein CBG11680 [Caeno...    40   0.081
gi|104852|pir||S13512 retinoic acid receptor beta-1 - chicken >g...    40   0.081
gi|47939545|gb|AAH71733.1| Unknown (protein for MGC:88071) [Homo...    40   0.081
gi|39591073|emb|CAE58853.1| Hypothetical protein CBG02077 [Caeno...    40   0.081
gi|39594505|emb|CAE72083.1| Hypothetical protein CBG19169 [Caeno...    40   0.081
gi|17562738|ref|NP_504455.1| nuclear Hormone Receptor (64.6 kD) ...    40   0.11
gi|7496412|pir||T33174 hypothetical protein C24G6.4 - Caenorhabd...    40   0.11
gi|14916494|ref|NP_000956.2| retinoic acid receptor, beta isofor...    40   0.11
gi|32026|emb|CAA68398.1| unnamed protein product [Homo sapiens]        40   0.11
gi|7496939|pir||T34132 hypothetical protein C33G8.11 - Caenorhab...    40   0.11
gi|18031835|gb|AAL02361.1| retinoic acid receptor beta-2 [Mesocr...    40   0.11
gi|226050|prf||1408258A retinoic acid receptor                         40   0.11
gi|35883|emb|CAA30262.1| unnamed protein product [Homo sapiens]        40   0.11
gi|45593124|ref|NP_035373.1| retinoic acid receptor, beta; RAR b...    40   0.11
gi|133484|sp|P11416|RRA_MOUSE Retinoic acid receptor alpha (RAR-...    40   0.11
gi|25396452|pir||G89050 protein T05C3.1 [imported] - Caenorhabdi...    40   0.11
gi|47224450|emb|CAG08700.1| unnamed protein product [Tetraodon n...    40   0.11
gi|2661449|emb|CAA05769.1| retinoic acid receptor beta2 [Rattus ...    40   0.11
gi|28396066|gb|AAO39196.1| nuclear receptor NHR-107 [Caenorhabdi...    40   0.11
gi|2148007|pir||I51256 retinoic acid receptor alpha - zebra fish...    40   0.11
gi|24638448|ref|NP_571481.1| retinoic acid receptor alpha-2.A; z...    40   0.11
gi|17570671|ref|NP_509893.1| hepatocyte nuclear factor 4 family ...    40   0.11
gi|47207654|emb|CAF91378.1| unnamed protein product [Tetraodon n...    40   0.11
gi|47226025|emb|CAG04399.1| unnamed protein product [Tetraodon n...    40   0.11
gi|39580583|emb|CAE70479.1| Hypothetical protein CBG17072 [Caeno...    40   0.11
gi|17558394|ref|NP_504770.1| nuclear Hormone Receptor (nhr-107) ...    40   0.11
gi|133494|sp|P22605|RRB_MOUSE Retinoic acid receptor beta (RAR-b...    40   0.11
gi|17367840|sp|Q9W5Z3|RRA_FUGRU Retinoic acid receptor alpha (RA...    40   0.11
gi|4972008|emb|CAB43871.1| retinoic acid receptor alpha-2 [Takif...    40   0.11
gi|17380507|sp|P10826|RRB_HUMAN Retinoic acid receptor beta (RAR...    40   0.11
gi|53891|emb|CAA40749.1| retinoic acid receptor-alpha [Mus muscu...    40   0.11
gi|31238331|ref|XP_319750.1| ENSANGP00000017216 [Anopheles gambi...    40   0.14
gi|28573920|ref|NP_788301.1| CG33183-PC [Drosophila melanogaster...    40   0.14
gi|47228363|emb|CAG07758.1| unnamed protein product [Tetraodon n...    40   0.14
gi|28573922|ref|NP_788302.1| CG33183-PB [Drosophila melanogaster...    40   0.14
gi|39593153|emb|CAE64622.1| Hypothetical protein CBG09380 [Caeno...    40   0.14
gi|2352809|gb|AAB69281.1| developmental orphan receptor-1 precur...    40   0.14
gi|28573924|ref|NP_788303.1| CG33183-PA [Drosophila melanogaster...    40   0.14
gi|17557568|ref|NP_504874.1| zn-finger, C4-type steroid receptor...    40   0.14
gi|6677671|ref|NP_033050.1| retinoic acid receptor, alpha; RAR a...    40   0.14
gi|25148054|ref|NP_741463.1| nuclear Hormone Receptor (nhr-66) [...    39   0.18
gi|25148061|ref|NP_741462.1| nuclear Hormone Receptor (nhr-66) [...    39   0.18
gi|39587500|emb|CAE58438.1| Hypothetical protein CBG01574 [Caeno...    39   0.18
gi|25153722|ref|NP_741322.1| nuclear receptor NHR-92 family memb...    39   0.18
gi|10198069|gb|AAG15169.1| nuclear receptor NHR-66 [Caenorhabdit...    39   0.18
gi|48094454|ref|XP_392128.1| similar to ENSANGP00000017216 [Apis...    39   0.18
gi|7507499|pir||T33028 hypothetical protein T09A12.4 - Caenorhab...    39   0.18
gi|25148057|ref|NP_741464.1| nuclear Hormone Receptor (nhr-66) [...    39   0.18
gi|1945622|dbj|BAA18949.1| PPAR gamma2 [Homo sapiens]                  39   0.18
gi|47208222|emb|CAF99979.1| unnamed protein product [Tetraodon n...    39   0.18
gi|10198067|gb|AAG15168.1| nuclear receptor NHR-66 [Caenorhabdit...    39   0.18
gi|47605712|sp|Q8MIB6|EFC1_PANTR ERV-F(c)1 provirus ancestral En...    39   0.18
gi|37546246|ref|XP_066621.3| similar to envelope protein [Homo s...    39   0.18
gi|85040|pir||S01919 knirps protein - fruit fly (Drosophila mela...    39   0.18
gi|17737693|ref|NP_524187.1| CG4717-PA [Drosophila melanogaster]...    39   0.18
gi|119094|sp|P13055|E75C_DROME Ecdysone-induced protein 75B isof...    39   0.18
gi|18157523|dbj|BAB83838.1| partially supported by GENSCAN and G...    39   0.24
gi|17532471|ref|NP_494682.1| nuclear receptor NHR-51 like family...    39   0.24
gi|47605602|sp|P61551|EFC1_GORGO ERV-F(c)1 provirus ancestral En...    39   0.24
gi|21310107|gb|AAM46149.1| retinoic acid receptor [Branchiostoma...    39   0.31
gi|17562764|ref|NP_505936.1| nuclear Hormone Receptor (44.8 kD) ...    39   0.31
gi|28396036|gb|AAO39181.1| nuclear receptor NHR-68 [Caenorhabdit...    39   0.31
gi|37194675|gb|AAH58269.1| Rorb protein [Mus musculus]                 39   0.31
gi|39592118|emb|CAE75338.1| Hypothetical protein CBG23318 [Caeno...    39   0.31
gi|17384409|emb|CAD13276.1| bA133M9.1 (RAR-related orphan recept...    39   0.31
gi|2500912|sp|Q24753|KNIR_DROVI Zygotic gap protein knirps >gnl|...    39   0.31
gi|18859343|ref|NP_571313.1| retinoid x receptor, delta; retinoi...    39   0.31
gi|45384158|ref|NP_990424.1| nuclear orphan receptor ROR-beta [G...    39   0.31
gi|49036489|sp|Q8R1B8|RORB_MOUSE Nuclear receptor ROR-beta (Nucl...    39   0.31
gi|1619294|emb|CAA69929.1| nuclear orphan receptor ROR-beta [Hom...    39   0.31
gi|17558386|ref|NP_504765.1| nuclear receptor NHR-94 family memb...    39   0.31
gi|19743907|ref|NP_008845.2| RAR-related orphan receptor B; reti...    39   0.31
gi|2507415|sp|P45446|RORB_RAT Nuclear receptor ROR-beta (Nuclear...    39   0.31
gi|30038109|gb|AAP12718.1| knirps [Drosophila americana]               39   0.31
gi|30266124|gb|AAP21572.1| knirps [Drosophila novamexicana]            39   0.31
gi|39592999|emb|CAE62613.1| Hypothetical protein CBG06732 [Caeno...    39   0.31
gi|34861688|ref|XP_219749.2| similar to Nuclear receptor ROR-bet...    39   0.31
gi|2143957|pir||I65219 retinoid-related orphan receptor RZR-beta...    39   0.31
gi|50760993|ref|XP_425885.1| PREDICTED: similar to nuclear orpha...    39   0.31
gi|3024414|sp|O19052|PPAT_RABIT Peroxisome proliferator activate...    39   0.31
gi|2605497|dbj|BAA23354.1| peroxisome proliferator activated-rec...    38   0.40
gi|119092|sp|P17671|E75A_DROME Ecdysone-induced protein 75B isof...    38   0.40
gi|34858222|ref|XP_227436.2| similar to RAR-related orphan recep...    38   0.40
gi|47213822|emb|CAF95413.1| unnamed protein product [Tetraodon n...    38   0.40
gi|585723|sp|P37234|PPAT_XENLA Peroxisome proliferator activated...    38   0.40
gi|13311191|emb|CAC34402.1| peroxisome proliferator-activated re...    38   0.40
gi|38014781|gb|AAH60474.1| PPARg protein [Xenopus laevis]              38   0.40
gi|1490313|emb|CAA62152.1| peroxisome proliferator activated rec...    38   0.40
gi|15723732|gb|AAL05262.1| peroxisome proliferator-activated rec...    38   0.40
gi|1145629|gb|AAB02582.1| orphan receptor TOR                          38   0.40
gi|13431788|sp|O18924|PPAT_MACMU Peroxisome proliferator activat...    38   0.40
gi|15928672|gb|AAH14804.1| RAR-related orphan receptor gamma [Mu...    38   0.40
gi|6981386|ref|NP_037256.1| peroxisome proliferator activated re...    38   0.40
gi|18255316|gb|AAH21798.1| Peroxisome proliferator activated rec...    38   0.40
gi|6755344|ref|NP_035411.1| RAR-related orphan receptor gamma; t...    38   0.40
gi|12584576|emb|CAA73382.2| peroxisome proliferator activated re...    38   0.40
gi|24666202|ref|NP_730322.1| CG8127-PC [Drosophila melanogaster]...    38   0.40
gi|30794338|ref|NP_851367.1| peroxisome proliferative activated ...    38   0.40
gi|6755138|ref|NP_035276.1| peroxisome proliferator activated re...    38   0.40
gi|20336229|ref|NP_056953.2| peroxisome proliferative activated ...    38   0.40
gi|48097465|ref|XP_393790.1| similar to Ecdysone-induced protein...    38   0.40
gi|8478106|sp|Q90416|RXRA_BRARE RETINOIC ACID RECEPTOR RXR-ALPHA...    38   0.40
gi|41282088|ref|NP_571292.2| retinoid x receptor, alpha; retinoi...    38   0.40
gi|28396064|gb|AAO39195.1| nuclear receptor NHR-107 [Caenorhabdi...    38   0.40
gi|29169314|gb|AAO66458.1| CREB3L2-PPARgamma [Homo sapiens]            38   0.40
gi|5679307|gb|AAD46913.1| RORgamma t [Mus musculus]                    38   0.40
gi|4186077|emb|CAA10661.1| ROR gamma T protein [Mus musculus]          38   0.40
gi|45384256|ref|NP_990625.1| retinoic acid receptor [Gallus gall...    38   0.40
gi|6448631|emb|CAB61263.1| peroxisome proliferator activated rec...    38   0.40
gi|6448520|emb|CAB61238.1| peroxisome proliferator activated rec...    38   0.40
gi|34861803|ref|XP_347323.1| similar to RAR-related orphan recep...    38   0.40
gi|8895467|gb|AAF80976.1| retonoic acid receptor gamma 2I [Ambys...    38   0.40
gi|21552435|gb|AAL05267.1| peroxisome proliferator-activated rec...    38   0.40
gi|15723730|gb|AAL05261.1| peroxisome proliferator-activated rec...    38   0.40
gi|20336231|ref|NP_005028.3| peroxisome proliferative activated ...    38   0.40
gi|47825369|ref|NP_001001460.1| peroxisome proliferative activat...    38   0.40
gi|27752867|gb|AAO19445.1| proliferator activated receptor-gamma...    38   0.40
gi|2645733|gb|AAB87481.1| peroxisome proliferator-activated rece...    38   0.40
gi|23306673|gb|AAN15206.1| peroxisome proliferator activated rec...    38   0.40
gi|22003526|gb|AAM88773.1| peroxisome proliferator activated rec...    38   0.40
gi|2653404|emb|CAA73032.1| peroxisome proliferator activated rec...    38   0.40
gi|3492843|dbj|BAA32540.1| PPAR-gamma protein [Rattus norvegicus...    38   0.40
gi|13431791|sp|P57797|PPAT_CRIGR Peroxisome proliferator activat...    38   0.40
gi|7446201|pir||JE0279 peroxisome proliferator-activated recepto...    38   0.40
gi|514307|gb|AAA19971.1| peroxisome proliferator-activated recep...    38   0.40
gi|454001|gb|AAC52134.1| peroxisome proliferator activated recep...    38   0.40
gi|47678881|dbj|BAD20642.1| peroxisome proliferator-activated re...    38   0.40
gi|47523814|ref|NP_999544.1| peroxisome proliferator-activated r...    38   0.40
gi|7446202|pir||JE0280 peroxisome proliferator-activated recepto...    38   0.40
gi|6015044|sp|O01639|E75_CHOFU ECDYSONE-INDUCIBLE PROTEIN E75 >g...    38   0.53
gi|14484879|gb|AAK62804.1| nuclear receptor HR3 isoform A [Bomby...    38   0.53
gi|45925833|gb|AAS79101.1| transcription factor E75A [Plodia int...    38   0.53
gi|6015045|sp|O77245|E75_METEN NUCLEAR HORMONE RECEPTOR E75 >gnl...    38   0.53
gi|39938474|gb|AAK14384.2| molt-regulating transcription factor ...    38   0.53
gi|47216868|emb|CAG11675.1| unnamed protein product [Tetraodon n...    38   0.53
gi|1706557|sp|P50239|E75_GALME Ecdysone-inducible protein E75 >g...    38   0.53
gi|18033301|gb|AAL57048.1| orphan nuclear receptor E75C [Bombyx ...    38   0.53
gi|6166165|sp|Q08893|E75_MANSE Ecdysone-inducible protein E75          38   0.53
gi|21166368|gb|AAL57049.2| orphan nuclear receptor E75C splicing...    38   0.53
gi|17569097|ref|NP_510659.1| nuclear Hormone Receptor (50.5 kD) ...    38   0.53
gi|19401880|gb|AAL87700.1| peroxisome proliferator-activated rec...    38   0.53
gi|24666198|ref|NP_730321.1| CG8127-PB [Drosophila melanogaster]...    38   0.53
gi|39580594|emb|CAE70490.1| Hypothetical protein CBG17088 [Caeno...    38   0.53
gi|39582383|emb|CAE74767.1| Hypothetical protein CBG22596 [Caeno...    38   0.53
gi|7495867|pir||T19202 hypothetical protein C11G6.4 - Caenorhabd...    38   0.53
gi|39586726|emb|CAE65768.1| Hypothetical protein CBG10857 [Caeno...    38   0.53
gi|585482|sp|Q08882|HR3_MANSE PROBABLE NUCLEAR HORMONE RECEPTOR ...    38   0.53
gi|17541670|ref|NP_501728.1| nuclear Hormone Receptor (nhr-38) [...    38   0.53
gi|1708295|sp|P49868|HR3_GALME PROBABLE NUCLEAR HORMONE RECEPTOR...    38   0.53
gi|18033299|gb|AAL57047.1| orphan nuclear receptor E75A [Bombyx ...    38   0.53
gi|6683592|dbj|BAA89262.1| nuclear hormone receptor E75 A [Bomby...    38   0.53
gi|10198075|gb|AAG15172.1| nuclear receptor NHR-70 [Caenorhabdit...    38   0.53
gi|10198071|gb|AAG15170.1| nuclear receptor NHR-70 [Caenorhabdit...    38   0.53
gi|17562766|ref|NP_507636.1| nuclear Hormone Receptor (43.9 kD) ...    38   0.53
gi|10198073|gb|AAG15171.1| nuclear receptor NHR-70 [Caenorhabdit...    38   0.53
gi|47223192|emb|CAG11327.1| unnamed protein product [Tetraodon n...    37   0.69
gi|2795872|gb|AAC39169.1| peroxisome proliferator-activated rece...    37   0.69
gi|32563886|ref|NP_494413.2| nuclear Hormone Receptor (64.1 kD) ...    37   0.69
gi|1515433|gb|AAC60126.1| xGCNF                                        37   0.69
gi|33386556|emb|CAD62447.1| peroxisome proliferator-activated re...    37   0.69
gi|39582349|emb|CAE67598.1| Hypothetical protein CBG13142 [Caeno...    37   0.69
gi|16580813|dbj|BAB71757.1| retinoic acid receptor unknown type ...    37   0.69
gi|32699513|sp|Q21878|NHR1_CAEEL Nuclear hormone receptor family...    37   0.69
gi|18858747|ref|NP_571331.1| nuclear receptor subfamily 6, group...    37   0.69
gi|21464742|gb|AAM54496.1| ecdysteroid receptor [Trichoplusia ni]      37   0.69
gi|3046863|dbj|BAA25569.1| retinoic acid receptor homologue [Pol...    37   0.69
gi|48255918|ref|NP_001001523.1| RAR-related orphan receptor C is...    37   0.69
gi|27669076|gb|AAO21381.1| Nuclear hormone receptor family prote...    37   0.69
gi|1082655|pir||JC2494 nuclear receptor ROR gamma - human >gnl|B...    37   0.69


>gi|10198041|gb|AAG15155.1| nuclear receptor NHR-58 [Caenorhabditis
            elegans]
          Length = 395

 Score =  784 bits (2025), Expect = 0.0
 Identities = 381/393 (96%), Positives = 381/393 (96%)
 Frame = +1

Query: 1    MLISIEFCKICDRKSQGIHFGVPSXXXXXXXXXXXXGSDLVEKSCMNKKCGKEFFLCKPC 180
            MLISIEFCKICDRKSQGIHFGVPS            GSDLVEKSCMNKKCGKEFFLCKPC
Sbjct: 3    MLISIEFCKICDRKSQGIHFGVPSCRACAAFFRRRAGSDLVEKSCMNKKCGKEFFLCKPC 62

Query: 181  RLVRCYAVGMDEKKFQFDRDALASTVLLNTIPKSFDKFVGRPQFVHFCDPSAPSTSKFID 360
            RLVRCYAVGMDEKKFQFDRDALASTVLLNTIPKSFDKFVGRPQFVHFCDPSAPSTSKFID
Sbjct: 63   RLVRCYAVGMDEKKFQFDRDALASTVLLNTIPKSFDKFVGRPQFVHFCDPSAPSTSKFID 122

Query: 361  VRLLVEKGENILKSGPSWTPHMNKGPLFKLANFHNVFTKMPVNMATNNVFSRGDCSDCWE 540
            VRLLVEKGENILKSGPSWTPHMNKGPLFKLANFHNVFTKMPVNMATNNVFSRGDCSDCWE
Sbjct: 123  VRLLVEKGENILKSGPSWTPHMNKGPLFKLANFHNVFTKMPVNMATNNVFSRGDCSDCWE 182

Query: 541  YYFLTTATWLTNFDEFQKLEHPVKMKILFAIWHMWGRMDKLACTALARRRQQLSAKSEIA 720
            YYFLTTATWLTNFDEFQKLEHPVKMKILFAIWHMWGRMDKLACTALARRRQQLSAKSEIA
Sbjct: 183  YYFLTTATWLTNFDEFQKLEHPVKMKILFAIWHMWGRMDKLACTALARRRQQLSAKSEIA 242

Query: 721  QSNGLFLDVDTLALDVSWISEFKLEEVEFFIDGFRNWDLMELVQVFVELDPTPIELNYML 900
            QSNGLFLDVDTLALDVSWISEFKLEEVEFFIDGFRNWDLMELVQVFVELDPTPIELNYML
Sbjct: 243  QSNGLFLDVDTLALDVSWISEFKLEEVEFFIDGFRNWDLMELVQVFVELDPTPIELNYML 302

Query: 901  AQMSFYYAGNRFQGEILEIMDRFQQILSDDLHKYYVNERHTSNYSGRLSRLLKINNAVQS 1080
            AQMSFYYAGNRFQGEILEIMDRFQQILSDDLHKYYVNERHTSNYSGRLSRLLKINNAVQS
Sbjct: 303  AQMSFYYAGNRFQGEILEIMDRFQQILSDDLHKYYVNERHTSNYSGRLSRLLKINNAVQS 362

Query: 1081 SVRKRRPKTDIAKTLNIFTAEFSHPEMFFDTGF 1179
            SVRKRRPKTDIAKTLNIFTAEFSHPEMFFDTGF
Sbjct: 363  SVRKRRPKTDIAKTLNIFTAEFSHPEMFFDTGF 395


>gi|17562756|ref|NP_503236.1| nuclear Hormone Receptor (45.6 kD)
            (nhr-58) [Caenorhabditis elegans]
 gi|25396174|pir||E88931 protein nhr-58 [imported] - Caenorhabditis
            elegans
 gi|2384852|gb|AAC69077.1| Nuclear hormone receptor family protein 58,
            isoform a [Caenorhabditis elegans]
          Length = 393

 Score =  784 bits (2025), Expect = 0.0
 Identities = 381/393 (96%), Positives = 381/393 (96%)
 Frame = +1

Query: 1    MLISIEFCKICDRKSQGIHFGVPSXXXXXXXXXXXXGSDLVEKSCMNKKCGKEFFLCKPC 180
            MLISIEFCKICDRKSQGIHFGVPS            GSDLVEKSCMNKKCGKEFFLCKPC
Sbjct: 1    MLISIEFCKICDRKSQGIHFGVPSCRACAAFFRRRAGSDLVEKSCMNKKCGKEFFLCKPC 60

Query: 181  RLVRCYAVGMDEKKFQFDRDALASTVLLNTIPKSFDKFVGRPQFVHFCDPSAPSTSKFID 360
            RLVRCYAVGMDEKKFQFDRDALASTVLLNTIPKSFDKFVGRPQFVHFCDPSAPSTSKFID
Sbjct: 61   RLVRCYAVGMDEKKFQFDRDALASTVLLNTIPKSFDKFVGRPQFVHFCDPSAPSTSKFID 120

Query: 361  VRLLVEKGENILKSGPSWTPHMNKGPLFKLANFHNVFTKMPVNMATNNVFSRGDCSDCWE 540
            VRLLVEKGENILKSGPSWTPHMNKGPLFKLANFHNVFTKMPVNMATNNVFSRGDCSDCWE
Sbjct: 121  VRLLVEKGENILKSGPSWTPHMNKGPLFKLANFHNVFTKMPVNMATNNVFSRGDCSDCWE 180

Query: 541  YYFLTTATWLTNFDEFQKLEHPVKMKILFAIWHMWGRMDKLACTALARRRQQLSAKSEIA 720
            YYFLTTATWLTNFDEFQKLEHPVKMKILFAIWHMWGRMDKLACTALARRRQQLSAKSEIA
Sbjct: 181  YYFLTTATWLTNFDEFQKLEHPVKMKILFAIWHMWGRMDKLACTALARRRQQLSAKSEIA 240

Query: 721  QSNGLFLDVDTLALDVSWISEFKLEEVEFFIDGFRNWDLMELVQVFVELDPTPIELNYML 900
            QSNGLFLDVDTLALDVSWISEFKLEEVEFFIDGFRNWDLMELVQVFVELDPTPIELNYML
Sbjct: 241  QSNGLFLDVDTLALDVSWISEFKLEEVEFFIDGFRNWDLMELVQVFVELDPTPIELNYML 300

Query: 901  AQMSFYYAGNRFQGEILEIMDRFQQILSDDLHKYYVNERHTSNYSGRLSRLLKINNAVQS 1080
            AQMSFYYAGNRFQGEILEIMDRFQQILSDDLHKYYVNERHTSNYSGRLSRLLKINNAVQS
Sbjct: 301  AQMSFYYAGNRFQGEILEIMDRFQQILSDDLHKYYVNERHTSNYSGRLSRLLKINNAVQS 360

Query: 1081 SVRKRRPKTDIAKTLNIFTAEFSHPEMFFDTGF 1179
            SVRKRRPKTDIAKTLNIFTAEFSHPEMFFDTGF
Sbjct: 361  SVRKRRPKTDIAKTLNIFTAEFSHPEMFFDTGF 393


>gi|27885074|gb|AAO26008.1| Nuclear hormone receptor family protein
            58, isoform b [Caenorhabditis elegans]
          Length = 324

 Score =  666 bits (1719), Expect = 0.0
 Identities = 324/324 (100%), Positives = 324/324 (100%)
 Frame = +1

Query: 208  MDEKKFQFDRDALASTVLLNTIPKSFDKFVGRPQFVHFCDPSAPSTSKFIDVRLLVEKGE 387
            MDEKKFQFDRDALASTVLLNTIPKSFDKFVGRPQFVHFCDPSAPSTSKFIDVRLLVEKGE
Sbjct: 1    MDEKKFQFDRDALASTVLLNTIPKSFDKFVGRPQFVHFCDPSAPSTSKFIDVRLLVEKGE 60

Query: 388  NILKSGPSWTPHMNKGPLFKLANFHNVFTKMPVNMATNNVFSRGDCSDCWEYYFLTTATW 567
            NILKSGPSWTPHMNKGPLFKLANFHNVFTKMPVNMATNNVFSRGDCSDCWEYYFLTTATW
Sbjct: 61   NILKSGPSWTPHMNKGPLFKLANFHNVFTKMPVNMATNNVFSRGDCSDCWEYYFLTTATW 120

Query: 568  LTNFDEFQKLEHPVKMKILFAIWHMWGRMDKLACTALARRRQQLSAKSEIAQSNGLFLDV 747
            LTNFDEFQKLEHPVKMKILFAIWHMWGRMDKLACTALARRRQQLSAKSEIAQSNGLFLDV
Sbjct: 121  LTNFDEFQKLEHPVKMKILFAIWHMWGRMDKLACTALARRRQQLSAKSEIAQSNGLFLDV 180

Query: 748  DTLALDVSWISEFKLEEVEFFIDGFRNWDLMELVQVFVELDPTPIELNYMLAQMSFYYAG 927
            DTLALDVSWISEFKLEEVEFFIDGFRNWDLMELVQVFVELDPTPIELNYMLAQMSFYYAG
Sbjct: 181  DTLALDVSWISEFKLEEVEFFIDGFRNWDLMELVQVFVELDPTPIELNYMLAQMSFYYAG 240

Query: 928  NRFQGEILEIMDRFQQILSDDLHKYYVNERHTSNYSGRLSRLLKINNAVQSSVRKRRPKT 1107
            NRFQGEILEIMDRFQQILSDDLHKYYVNERHTSNYSGRLSRLLKINNAVQSSVRKRRPKT
Sbjct: 241  NRFQGEILEIMDRFQQILSDDLHKYYVNERHTSNYSGRLSRLLKINNAVQSSVRKRRPKT 300

Query: 1108 DIAKTLNIFTAEFSHPEMFFDTGF 1179
            DIAKTLNIFTAEFSHPEMFFDTGF
Sbjct: 301  DIAKTLNIFTAEFSHPEMFFDTGF 324




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