Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= T01C3_8
(1059 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17563672|ref|NP_506691.1| FIBrillarin (36.4 kD) (fib-1) [Caen... 474 e-132
gi|39583363|emb|CAE66337.1| Hypothetical protein CBG11588 [Caeno... 472 e-132
gi|47218782|emb|CAG02768.1| unnamed protein product [Tetraodon n... 383 e-105
gi|30353806|gb|AAH51777.1| Zgc:56145 protein [Danio rerio] >gnl|... 382 e-105
gi|27924365|gb|AAH45093.1| LOC398434 protein [Xenopus laevis] 379 e-104
gi|45360851|ref|NP_989101.1| fibrillarin [Xenopus tropicalis] >g... 379 e-104
gi|49118982|gb|AAH73610.1| LOC398434 protein [Xenopus laevis] 379 e-104
gi|119856|sp|P22232|FBRL_XENLA Fibrillarin >gnl|BL_ORD_ID|164402... 377 e-103
gi|27374264|gb|AAO01021.1| Fib-PA [Drosophila erecta] 372 e-102
gi|18044582|gb|AAH19609.1| Unknown (protein for IMAGE:4538098) [... 372 e-101
gi|17647425|ref|NP_523817.1| CG9888-PA [Drosophila melanogaster]... 372 e-101
gi|3399667|gb|AAC28913.1| FBRL_HUMAN; 34 KD NUCLEOLAR SCLERODERM... 372 e-101
gi|30583881|gb|AAP36189.1| Homo sapiens fibrillarin [synthetic c... 372 e-101
gi|12056465|ref|NP_001427.2| fibrillarin; 34-kD nucleolar sclero... 372 e-101
gi|31982373|ref|NP_032017.2| fibrillarin [Mus musculus] >gnl|BL_... 372 e-101
gi|34855407|ref|XP_214836.2| similar to fibrillarin [Rattus norv... 372 e-101
gi|544284|sp|P35550|FBRL_MOUSE Fibrillarin (Nucleolar protein 1)... 371 e-101
gi|31200907|ref|XP_309401.1| ENSANGP00000015622 [Anopheles gambi... 370 e-101
gi|25012804|gb|AAN71493.1| RE72617p [Drosophila melanogaster] 370 e-101
gi|182592|gb|AAA52453.1| fibrillarin 370 e-101
gi|30696189|ref|NP_568772.3| fibrillarin 1 (FBR1) (FIB1) (SKIP7)... 353 3e-96
gi|42657202|ref|XP_293903.4| similar to fibrillarin [Homo sapiens] 353 5e-96
gi|34871183|ref|XP_343875.1| similar to fibrillarin; 34-kD nucle... 352 8e-96
gi|48716271|dbj|BAD22886.1| putative fibrillarin [Oryza sativa (... 352 8e-96
gi|38091595|ref|XP_111253.3| similar to fibrillarin [Mus musculu... 351 1e-95
gi|18416588|ref|NP_567724.1| fibrillarin 2 (FIB2) [Arabidopsis t... 351 1e-95
gi|15028155|gb|AAK76701.1| putative fibrillarin 2 protein AtFib2... 351 2e-95
gi|6003681|gb|AAF00542.1| fibrillarin homolog [Arabidopsis thali... 350 4e-95
gi|2982266|gb|AAC32120.1| probable fibrillarin [Picea mariana] 348 9e-95
gi|50548829|ref|XP_501884.1| hypothetical protein [Yarrowia lipo... 345 8e-94
gi|19113021|ref|NP_596229.1| fibrillarin. [Schizosaccharomyces p... 340 4e-92
gi|46228702|gb|EAK89572.1| fibrillarin. RNA methylase [Cryptosp... 339 6e-92
gi|46437069|gb|EAK96422.1| hypothetical protein CaO19.3138 [Cand... 338 1e-91
gi|50291747|ref|XP_448306.1| unnamed protein product [Candida gl... 338 2e-91
gi|45190817|ref|NP_985071.1| AER214Cp [Eremothecium gossypii] >g... 337 2e-91
gi|50304875|ref|XP_452393.1| unnamed protein product [Kluyveromy... 337 2e-91
gi|6320190|ref|NP_010270.1| Nucleolar protein, component of the ... 337 3e-91
gi|50255245|gb|EAL17981.1| hypothetical protein CNBK3320 [Crypto... 336 5e-91
gi|50422247|ref|XP_459686.1| unnamed protein product [Debaryomyc... 335 1e-90
gi|14916991|sp|Q27200|FBRL_TETTH Fibrillarin >gnl|BL_ORD_ID|7645... 328 1e-88
gi|44890018|emb|CAF32136.1| fibrillarin, putative [Aspergillus f... 328 1e-88
gi|50511418|gb|AAT77341.1| putative fibrillarin protein [Oryza s... 326 6e-88
gi|38109530|gb|EAA55388.1| hypothetical protein MG09195.4 [Magna... 322 7e-87
gi|23484892|gb|EAA20072.1| multidomain scavenger receptor protei... 322 9e-87
gi|8050502|gb|AAF71690.1| fibrillarin [Trypanosoma brucei rhodes... 322 1e-86
gi|23509289|ref|NP_701956.1| fibrillarin, putative [Plasmodium f... 320 3e-86
gi|32404782|ref|XP_323004.1| hypothetical protein [Neurospora cr... 320 5e-86
gi|2253105|gb|AAB62872.1| fibrillarin [Plasmodium falciparum] 319 6e-86
gi|4240554|gb|AAD13616.1| fibrillarin [Euglena gracilis] 318 1e-85
gi|544283|sp|P35549|FBRL_LEIMA Fibrillarin >gnl|BL_ORD_ID|153072... 318 2e-85
gi|13812026|ref|NP_113157.1| fibrillarin like-protein [Guillardi... 306 5e-82
gi|38048157|gb|AAR09981.1| similar to Drosophila melanogaster Fi... 305 9e-82
gi|19074691|ref|NP_586197.1| FIBRILLARIN (34kDa NUCLEOLAR PROTEI... 300 5e-80
gi|46109976|ref|XP_382046.1| hypothetical protein FG01870.1 [Gib... 300 5e-80
gi|29249085|gb|EAA40604.1| GLP_23_3561_2578 [Giardia lamblia ATC... 268 2e-70
gi|2833323|sp|Q24957|FBRL_GIALA Fibrillarin >gnl|BL_ORD_ID|76355... 268 2e-70
gi|18423398|ref|NP_568773.1| fibrillarin, putative [Arabidopsis ... 267 3e-70
gi|38083797|ref|XP_140465.2| similar to Fibrillarin [Mus musculus] 251 2e-65
gi|49074592|ref|XP_401419.1| hypothetical protein UM03804.1 [Ust... 246 5e-65
gi|4321126|gb|AAD15623.1| FBRL_HUMAN [AA 1- 227]; 34 KD NUCLEOLA... 234 3e-60
gi|1903277|emb|CAA98571.1| NOP1 [Saccharomyces cerevisiae] 230 5e-59
gi|20093998|ref|NP_613845.1| Fibrillarin-like rRNA methylase [Me... 218 1e-55
gi|47168556|pdb|1PRY|A Chain A, Structure Determination Of Fibri... 218 2e-55
gi|14520277|ref|NP_125752.1| fibrillarin-like pre-rrna processin... 217 4e-55
gi|18976431|ref|NP_577788.1| fibrillarin-like pre-rRNA processin... 215 1e-54
gi|14590005|ref|NP_142069.1| fibrillarin-like pre-rRNA processin... 213 5e-54
gi|15921530|ref|NP_377199.1| 236aa long hypothetical fibrillarin... 212 1e-53
gi|20454901|sp|Q971W2|FLPA_SULTO Fibrillarin-like pre-rRNA proce... 212 1e-53
gi|18313923|ref|NP_560590.1| fibrillarin-like pre-rRNA processin... 209 9e-53
gi|14601907|ref|NP_148452.1| fibrillarin [Aeropyrum pernix K1] >... 205 2e-51
gi|15897821|ref|NP_342426.1| Fibrillarin-like pre-rRNA processin... 200 5e-50
gi|34853073|ref|XP_236542.2| similar to fibrillarin [Rattus norv... 199 9e-50
gi|13878491|sp|Q9P9M0|FLPA_SULAC Fibrillarin-like pre-rRNA proce... 195 1e-48
gi|41614921|ref|NP_963419.1| NEQ125 [Nanoarchaeum equitans Kin4-... 193 5e-48
gi|48840613|ref|ZP_00297539.1| COG1889: Fibrillarin-like rRNA me... 192 8e-48
gi|45358160|ref|NP_987717.1| Fibrillarin [Methanococcus maripalu... 189 1e-46
gi|34861915|ref|XP_219621.2| similar to KIAA1895 protein [Rattus... 186 6e-46
gi|548830|sp|P35552|FLPA_METVA Fibrillarin-like pre-rRNA process... 186 8e-46
gi|15668878|ref|NP_247681.1| fibrillarin (fib) [Methanocaldococc... 186 1e-45
gi|7766925|pdb|1FBN|A Chain A, Crystal Structure Of A Fibrillari... 185 1e-45
gi|24646406|ref|NP_650236.1| CG10909-PA [Drosophila melanogaster... 184 3e-45
gi|41720446|ref|ZP_00149259.1| COG1889: Fibrillarin-like rRNA me... 184 3e-45
gi|21227696|ref|NP_633618.1| Fibrillarin [Methanosarcina mazei G... 183 5e-45
gi|13878487|sp|Q9HH35|FLPA_METWO Fibrillarin-like pre-rRNA proce... 183 5e-45
gi|548831|sp|P35553|FLPA_METVO Fibrillarin-like pre-rRNA process... 182 1e-44
gi|15679226|ref|NP_276343.1| fibrillarin-like pre-rRNA processin... 182 1e-44
gi|20089239|ref|NP_615314.1| fibrillarin [Methanosarcina acetivo... 178 2e-43
gi|26339348|dbj|BAC33345.1| unnamed protein product [Mus musculus] 160 5e-43
gi|11357085|pir||T47220 fibrillarin [imported] - Methanosarcina ... 169 8e-41
gi|11499669|ref|NP_070911.1| fibrillarin (fib) [Archaeoglobus fu... 157 5e-37
gi|10716959|gb|AAG21982.1| SKP1 interacting partner 7 [Arabidops... 140 4e-32
gi|48851928|ref|ZP_00306122.1| COG1889: Fibrillarin-like rRNA me... 130 4e-29
gi|16081994|ref|NP_394409.1| fibrillarin-like pre-rRNA processin... 130 4e-29
gi|13541925|ref|NP_111613.1| Fibrillarin-like rRNA methylase [Th... 129 1e-28
gi|15790248|ref|NP_280072.1| fibrillarin; Fib [Halobacterium sp.... 126 1e-27
gi|48478284|ref|YP_023990.1| fibrillarin-like pre-rRNA processin... 106 1e-21
gi|34935513|ref|XP_234559.2| similar to hypothetical protein [Ra... 102 1e-20
gi|2996140|gb|AAC32162.1| fibrillarin [Picea mariana] >gnl|BL_OR... 98 3e-19
gi|4240548|gb|AAD13613.1| fibrillarin [Euglena gracilis] 89 1e-16
gi|49085536|ref|XP_404882.1| hypothetical protein AN0745.2 [Aspe... 89 2e-16
gi|6474339|dbj|BAA87245.1| Fibrillarin [Schizosaccharomyces pombe] 69 2e-10
gi|50762786|ref|XP_426737.1| PREDICTED: similar to fibrillarin, ... 52 2e-05
gi|929566|emb|CAA28903.1| fibrillarin [Drosophila melanogaster] 47 7e-04
gi|20093312|ref|NP_619387.1| conserved hypothetical protein [Met... 42 0.031
gi|21227333|ref|NP_633255.1| SAM-dependent methyltransferases [M... 40 0.091
gi|42522939|ref|NP_968319.1| cell division protein FtsJ [Bdellov... 39 0.26
gi|29654650|ref|NP_820342.1| ribosomal RNA large subunit methylt... 39 0.26
gi|141450|sp|P20187|YT37_STRFR Hypothetical 37.1 kDa protein in ... 38 0.45
gi|33865218|ref|NP_896777.1| similar to methyltransferase [Synec... 37 0.59
gi|48839384|ref|ZP_00296316.1| COG1189: Predicted rRNA methylase... 37 0.59
gi|37626097|gb|AAQ96473.1| putative protease [Vibrio parahaemoly... 37 0.59
gi|15922132|ref|NP_377801.1| 192aa long hypothetical precorrin-8... 37 0.77
gi|20094473|ref|NP_614320.1| Precorrin-6B methylase [Methanopyru... 37 0.77
gi|19114511|ref|NP_593599.1| hypothetical protein [Schizosacchar... 37 1.0
gi|2130539|gb|AAC51342.1| mucin MUC5B [Homo sapiens] 35 2.2
gi|42659788|ref|XP_039877.8| mucin 5, subtype B, tracheobronchia... 35 2.9
gi|15679761|ref|NP_276879.1| cell division protein J [Methanothe... 35 2.9
gi|33874499|gb|AAH36713.1| FLJ00012 protein [Homo sapiens] 35 3.8
gi|22064139|ref|XP_058426.6| hypothetical protein FLJ00012 [Homo... 35 3.8
gi|21751745|dbj|BAC04021.1| unnamed protein product [Homo sapiens] 35 3.8
gi|15678847|ref|NP_275964.1| L-isoaspartyl protein carboxyl meth... 35 3.8
gi|41409637|ref|NP_962473.1| FadE1_3 [Mycobacterium avium subsp.... 34 5.0
gi|15679864|ref|NP_276982.1| conserved protein [Methanothermobac... 34 5.0
gi|23821885|sp|Q9HC84|MU5B_HUMAN Mucin 5B precursor (Mucin 5 sub... 34 5.0
gi|11360308|pir||T45025 mucin MUC5B, tracheobronchial [imported]... 34 5.0
gi|20808537|ref|NP_623708.1| tRNA and rRNA cytosine-C5-methylase... 34 6.5
gi|46315199|ref|ZP_00215782.1| COG2226: Methylase involved in ub... 34 6.5
gi|27262374|gb|AAN87468.1| Dimethyladenosine transferase [Heliob... 34 6.5
gi|18417421|ref|NP_568302.1| expressed protein [Arabidopsis thal... 34 6.5
gi|11358041|pir||T48633 hypothetical protein T15N1.90 - Arabidop... 34 6.5
gi|21748789|dbj|BAC03485.1| unnamed protein product [Homo sapiens] 33 8.5
gi|38104958|gb|EAA51450.1| hypothetical protein MG10367.4 [Magna... 33 8.5
gi|15607273|ref|NP_214645.1| fadE1 [Mycobacterium tuberculosis H... 33 8.5
>gi|17563672|ref|NP_506691.1| FIBrillarin (36.4 kD) (fib-1)
[Caenorhabditis elegans]
gi|2833313|sp|Q22053|FBRL_CAEEL Fibrillarin
gi|7506840|pir||T24279 hypothetical protein T01C3.7 -
Caenorhabditis elegans
gi|3879244|emb|CAB01657.1| Hypothetical protein T01C3.7
[Caenorhabditis elegans]
Length = 352
Score = 474 bits (1219), Expect = e-132
Identities = 238/238 (100%), Positives = 238/238 (100%)
Frame = -1
Query: 717 KTVVVEPHRLGGVFIVKGKEDALATKNMVVGESVYGEKRVSVDDGAGSIEYRVWNPFRSK 538
KTVVVEPHRLGGVFIVKGKEDALATKNMVVGESVYGEKRVSVDDGAGSIEYRVWNPFRSK
Sbjct: 115 KTVVVEPHRLGGVFIVKGKEDALATKNMVVGESVYGEKRVSVDDGAGSIEYRVWNPFRSK 174
Query: 537 LAASIMGGLENTHIKPGTKLLYLGAASGTTVSHCSDVVGPEGIVYAVEFSHRSGRDLLGV 358
LAASIMGGLENTHIKPGTKLLYLGAASGTTVSHCSDVVGPEGIVYAVEFSHRSGRDLLGV
Sbjct: 175 LAASIMGGLENTHIKPGTKLLYLGAASGTTVSHCSDVVGPEGIVYAVEFSHRSGRDLLGV 234
Query: 357 AKKRPNVVPIVEDARHPHKYRMLVGMVDVIFSDVAQPDQARIVALNAQNFLRNGGHAVIS 178
AKKRPNVVPIVEDARHPHKYRMLVGMVDVIFSDVAQPDQARIVALNAQNFLRNGGHAVIS
Sbjct: 235 AKKRPNVVPIVEDARHPHKYRMLVGMVDVIFSDVAQPDQARIVALNAQNFLRNGGHAVIS 294
Query: 177 IKANCIDSTAEPEAVFAGEVNKLKEEKFKPLEQVTLEPYERDHAVVVAVYRPVKGKKV 4
IKANCIDSTAEPEAVFAGEVNKLKEEKFKPLEQVTLEPYERDHAVVVAVYRPVKGKKV
Sbjct: 295 IKANCIDSTAEPEAVFAGEVNKLKEEKFKPLEQVTLEPYERDHAVVVAVYRPVKGKKV 352
>gi|39583363|emb|CAE66337.1| Hypothetical protein CBG11588
[Caenorhabditis briggsae]
Length = 350
Score = 472 bits (1215), Expect = e-132
Identities = 237/238 (99%), Positives = 237/238 (99%)
Frame = -1
Query: 717 KTVVVEPHRLGGVFIVKGKEDALATKNMVVGESVYGEKRVSVDDGAGSIEYRVWNPFRSK 538
KTVVVEPHRLGGVFIVKGKEDALATKNMVVGESVYGEKRVSVDDGAGSIEYRVWNPFRSK
Sbjct: 113 KTVVVEPHRLGGVFIVKGKEDALATKNMVVGESVYGEKRVSVDDGAGSIEYRVWNPFRSK 172
Query: 537 LAASIMGGLENTHIKPGTKLLYLGAASGTTVSHCSDVVGPEGIVYAVEFSHRSGRDLLGV 358
LAASIMGGLENTHIKPGTKLLYLGAASGTTVSHCSDVVGPEGIVYAVEFSHRSGRDLLGV
Sbjct: 173 LAASIMGGLENTHIKPGTKLLYLGAASGTTVSHCSDVVGPEGIVYAVEFSHRSGRDLLGV 232
Query: 357 AKKRPNVVPIVEDARHPHKYRMLVGMVDVIFSDVAQPDQARIVALNAQNFLRNGGHAVIS 178
AKKRPNVVPIVEDARHPHKYRMLVGMVDVIFSDVAQPDQARIVALNAQNFLRNGGHAVIS
Sbjct: 233 AKKRPNVVPIVEDARHPHKYRMLVGMVDVIFSDVAQPDQARIVALNAQNFLRNGGHAVIS 292
Query: 177 IKANCIDSTAEPEAVFAGEVNKLKEEKFKPLEQVTLEPYERDHAVVVAVYRPVKGKKV 4
IKANCIDSTAEPEAVFAGEVNKLKEEKFKPLEQVTLEPYERDHAVVVA YRPVKGKKV
Sbjct: 293 IKANCIDSTAEPEAVFAGEVNKLKEEKFKPLEQVTLEPYERDHAVVVATYRPVKGKKV 350