Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= T07F10_2
         (696 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17564066|ref|NP_506219.1| putative membrane protein (25.6 kD)...   444   e-123
gi|39593257|emb|CAE64727.1| Hypothetical protein CBG09514 [Caeno...   353   2e-96
gi|39586380|emb|CAE74037.1| Hypothetical protein CBG21688 [Caeno...    47   3e-04
gi|39598027|emb|CAE68719.1| Hypothetical protein CBG14645 [Caeno...    42   0.012
gi|17570355|ref|NP_508892.1| putative protein family member (XF8...    39   0.10
gi|39586041|emb|CAE69117.1| Hypothetical protein CBG15143 [Caeno...    38   0.22
gi|17553670|ref|NP_498612.1| putative secreted or extracellular ...    37   0.29
gi|17540504|ref|NP_501637.1| putative secreted or extracellular ...    37   0.38
gi|17556118|ref|NP_497678.1| putative secreted or extracellular ...    33   5.5
gi|17542444|ref|NP_501640.1| putative secreted or extracellular ...    33   5.5
gi|49075066|ref|XP_401623.1| hypothetical protein UM04008.1 [Ust...    33   5.5
gi|40882169|emb|CAF05995.1| hypothetical protein [Neurospora cra...    33   5.5
gi|46443861|gb|EAL03140.1| hypothetical protein CaO19.4010 [Cand...    32   9.4
gi|39587154|emb|CAE57622.1| Hypothetical protein CBG00605 [Caeno...    32   9.4
gi|17570363|ref|NP_508891.1| putative secreted or extracellular ...    32   9.4


>gi|17564066|ref|NP_506219.1| putative membrane protein (25.6 kD)
           (5N344) [Caenorhabditis elegans]
 gi|7507393|pir||T24669 hypothetical protein T07F10.6 -
           Caenorhabditis elegans
 gi|4008418|emb|CAB01246.1| Hypothetical protein T07F10.6
           [Caenorhabditis elegans]
          Length = 231

 Score =  444 bits (1141), Expect = e-123
 Identities = 218/231 (94%), Positives = 218/231 (94%)
 Frame = -1

Query: 696 MISTTFIIFLFVSLGNAQQCSTPQTLYTCYISYLGKYGVVPDDGYLPPSEFILNQMMTHG 517
           MISTTFIIFLFVSLGNAQQCSTPQTLYTCYISYLGKYGVVPDDGYLPPSEFILNQMMTHG
Sbjct: 1   MISTTFIIFLFVSLGNAQQCSTPQTLYTCYISYLGKYGVVPDDGYLPPSEFILNQMMTHG 60

Query: 516 LPVICKDFEELVSCLGTASTYCVNLNVFVAYTTGRHPDREALAYLQNHAFFEFACGSGRD 337
           LPVICKDFEELVSCLGTASTYCVNLNVFVAYTTGRHPDREALAYLQNHAFFEFACGSGRD
Sbjct: 61  LPVICKDFEELVSCLGTASTYCVNLNVFVAYTTGRHPDREALAYLQNHAFFEFACGSGRD 120

Query: 336 LFMNNLDCIQRSFQQIPLTNRMQQCGQSSLAINEDSCPSTLQVTDCVRQQMNEXXXXXXX 157
           LFMNNLDCIQRSFQQIPLTNRMQQCGQSSLAINEDSCPSTLQVTDCVRQQMNE
Sbjct: 121 LFMNNLDCIQRSFQQIPLTNRMQQCGQSSLAINEDSCPSTLQVTDCVRQQMNEACGPSAG 180

Query: 156 XXXXXXATNIERRLDFLDAACLTEMDARCSVCQLKILTSIIILFIHRLIFT 4
                 ATNIERRLDFLDAACLTEMDARCSVCQLKILTSIIILFIHRLIFT
Sbjct: 181 AAACGAATNIERRLDFLDAACLTEMDARCSVCQLKILTSIIILFIHRLIFT 231




[DB home][top]