Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= T13B5_4
(1251 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17536229|ref|NP_493913.1| COLlagen structural gene (col-40) [... 210 5e-53
gi|22096343|sp|P34804|CC40_CAEEL Cuticle collagen 40 178 3e-43
gi|39587054|emb|CAE62989.1| Hypothetical protein CBG07217 [Caeno... 166 8e-40
gi|7494557|pir||T37286 collagen 40 - Caenorhabditis elegans >gnl... 166 1e-39
gi|39585576|emb|CAE65336.1| Hypothetical protein CBG10272 [Caeno... 129 2e-28
gi|17536359|ref|NP_496665.1| COLlagen structural gene (col-85) [... 127 4e-28
gi|39581442|emb|CAE74724.1| Hypothetical protein CBG22542 [Caeno... 124 5e-27
gi|1814029|gb|AAB41793.1| cuticle collagen [Caenorhabditis brigg... 120 7e-26
gi|17559058|ref|NP_505678.1| COLlagen structural gene (30.1 kD) ... 120 7e-26
gi|39593349|emb|CAE64819.1| Hypothetical protein CBG09613 [Caeno... 120 7e-26
gi|17559060|ref|NP_505677.1| COLlagen structural gene (col-13) [... 120 9e-26
gi|32567317|ref|NP_506284.2| COLlagen structural gene (30.3 kD) ... 119 1e-25
gi|17561542|ref|NP_506283.1| COLlagen structural gene (col-159) ... 118 3e-25
gi|39586875|emb|CAE62810.1| Hypothetical protein CBG06986 [Caeno... 117 7e-25
gi|17541194|ref|NP_499905.1| COLlagen structural gene (col-101) ... 115 3e-24
gi|17532495|ref|NP_493660.1| COLlagen structural gene (col-68) [... 114 4e-24
gi|17543526|ref|NP_502966.1| predicted CDS, COLlagen structural ... 113 1e-23
gi|39597358|emb|CAE59586.1| Hypothetical protein CBG02987 [Caeno... 103 1e-20
gi|17533809|ref|NP_496362.1| COLlagen structural gene (29.2 kD) ... 102 1e-20
gi|39593182|emb|CAE64651.1| Hypothetical protein CBG09422 [Caeno... 100 7e-20
gi|7504495|pir||T22827 hypothetical protein F57B1.4 - Caenorhabd... 96 2e-18
gi|39593181|emb|CAE64650.1| Hypothetical protein CBG09421 [Caeno... 94 9e-18
gi|17535253|ref|NP_495759.1| COLlagen structural gene (29.4 kD) ... 93 1e-17
gi|39587231|emb|CAE57699.1| Hypothetical protein CBG00703 [Caeno... 92 3e-17
gi|7498929|pir||T29980 hypothetical protein F11G11.10 - Caenorha... 92 3e-17
gi|39579269|emb|CAE56956.1| Hypothetical protein CBG24806 [Caeno... 87 6e-16
gi|17533115|ref|NP_494880.1| COLlagen structural gene (col-73) [... 87 6e-16
gi|39596930|emb|CAE59157.1| Hypothetical protein CBG02463 [Caeno... 87 8e-16
gi|17531395|ref|NP_495104.1| BLIstered cuticle BLI-2, Nematode c... 86 1e-15
gi|1236783|emb|CAA65506.1| cuticular collagen [Teladorsagia circ... 80 1e-13
gi|1236781|emb|CAA65507.1| cuticular collagen [Teladorsagia circ... 80 1e-13
gi|7378665|emb|CAB85468.1| putative cuticular collagen [Brugia p... 78 5e-13
gi|1813688|gb|AAC47626.1| unknown [Brugia malayi] >gnl|BL_ORD_ID... 75 2e-12
gi|17532621|ref|NP_494879.1| COLlagen structural gene (col-20) [... 75 3e-12
gi|46195903|gb|AAB37842.2| Collagen protein 20 [Caenorhabditis e... 75 3e-12
gi|563237|gb|AAC46628.1| cuticular collagen Bmcol-2 75 4e-12
gi|5514647|emb|CAB50767.1| putative cuticular collagen protein [... 72 3e-11
gi|17569675|ref|NP_509051.1| COLlagen structural gene (col-166) ... 72 4e-11
gi|4335794|gb|AAD17458.1| cuticular collagen [Ascaris suum] 72 4e-11
gi|30025105|gb|AAP13769.1| Hypothetical protein T07H6.3b [Caenor... 72 4e-11
gi|32566596|ref|NP_872268.1| COLlagen structural gene (col-171) ... 71 5e-11
gi|39585828|emb|CAE61241.1| Hypothetical protein CBG05041 [Caeno... 70 1e-10
gi|39585817|emb|CAE61230.1| Hypothetical protein CBG05029 [Caeno... 70 1e-10
gi|39597359|emb|CAE59587.1| Hypothetical protein CBG02988 [Caeno... 70 1e-10
gi|39585827|emb|CAE61240.1| Hypothetical protein CBG05040 [Caeno... 69 2e-10
gi|32566594|ref|NP_872267.1| COLlagen structural gene (col-170) ... 69 3e-10
gi|39585825|emb|CAE61238.1| Hypothetical protein CBG05038 [Caeno... 69 3e-10
gi|17550996|ref|NP_509960.1| COLlagen structural gene (col-180Co... 69 3e-10
gi|17569753|ref|NP_509060.1| COLlagen structural gene (28.5 kD) ... 69 3e-10
gi|7507620|pir||T16841 hypothetical protein T10E10.2 - Caenorhab... 68 4e-10
gi|17569755|ref|NP_509059.1| COLlagen structural gene (28.5 kD) ... 68 4e-10
gi|17533807|ref|NP_496361.1| COLlagen structural gene (30.9 kD) ... 67 7e-10
gi|39585824|emb|CAE61237.1| Hypothetical protein CBG05037 [Caeno... 67 1e-09
gi|17567743|ref|NP_509276.1| COLlagen structural gene (30.0 kD) ... 67 1e-09
gi|39585826|emb|CAE61239.1| Hypothetical protein CBG05039 [Caeno... 66 1e-09
gi|32566570|ref|NP_872255.1| COLlagen structural gene (28.4 kD) ... 66 1e-09
gi|39594818|emb|CAE70686.1| Hypothetical protein CBG17403 [Caeno... 66 1e-09
gi|39594125|emb|CAE70235.1| Hypothetical protein CBG16724 [Caeno... 66 2e-09
gi|17550810|ref|NP_509869.1| COLlagen structural gene (27.8 kD) ... 65 3e-09
gi|17539404|ref|NP_503048.1| COLlagen structural gene (28.0 kD) ... 65 3e-09
gi|39585160|emb|CAE57403.1| Hypothetical protein CBG00356 [Caeno... 65 4e-09
gi|7508918|pir||T26125 hypothetical protein W03G11.1 - Caenorhab... 64 1e-08
gi|39596236|emb|CAE69873.1| Hypothetical protein CBG16210 [Caeno... 64 1e-08
gi|17570227|ref|NP_510021.1| COLlagen structural gene (col-181) ... 64 1e-08
gi|17550812|ref|NP_509870.1| COLlagen structural gene (col-179) ... 61 6e-08
gi|21954120|gb|AAM80556.1| cuticular collagen [Trichinella spira... 60 8e-08
gi|39591241|emb|CAE73294.1| Hypothetical protein CBG20714 [Caeno... 60 1e-07
gi|39594817|emb|CAE70685.1| Hypothetical protein CBG17402 [Caeno... 59 3e-07
gi|39586728|emb|CAE65770.1| Hypothetical protein CBG10862 [Caeno... 57 9e-07
gi|17567513|ref|NP_509121.1| COLlagen structural gene (35.0 kD) ... 57 9e-07
gi|39596084|emb|CAE69720.1| Hypothetical protein CBG15991 [Caeno... 57 1e-06
gi|7494563|pir||T34507 cutical collagen 6 - Caenorhabditis elegans 56 2e-06
gi|39595982|emb|CAE67485.1| Hypothetical protein CBG12990 [Caeno... 56 2e-06
gi|17535689|ref|NP_495582.1| ROLler: helically twisted, animals ... 56 2e-06
gi|84433|pir||JS0167 collagen col-6 - Caenorhabditis elegans >gn... 56 2e-06
gi|32563818|ref|NP_871912.1| ROLler: helically twisted, animals ... 56 2e-06
gi|32567349|ref|NP_872207.1| COLlagen structural gene (col-42) [... 55 4e-06
gi|17567621|ref|NP_509162.1| COLlagen structural gene (col-173) ... 54 8e-06
gi|17551382|ref|NP_508395.1| DumPY : shorter than wild-type DPY-... 54 1e-05
gi|17531401|ref|NP_493635.1| COLlagen structural gene (col-67Co)... 52 3e-05
gi|39586769|emb|CAE65811.1| Hypothetical protein CBG10919 [Caeno... 52 4e-05
gi|39582304|emb|CAE67553.1| Hypothetical protein CBG13078 [Caeno... 50 1e-04
gi|39586900|emb|CAE62835.1| Hypothetical protein CBG07014 [Caeno... 50 1e-04
gi|17532623|ref|NP_495487.1| COLlagen structural gene (col-36) [... 50 1e-04
gi|17510331|ref|NP_491088.1| COLlagen structural gene (col-48) [... 50 1e-04
gi|39595524|emb|CAE60562.1| Hypothetical protein CBG04191 [Caeno... 50 1e-04
gi|7496625|pir||T15670 hypothetical protein C27H5.5 - Caenorhabd... 50 1e-04
gi|39597656|emb|CAE68347.1| Hypothetical protein CBG14077 [Caeno... 48 4e-04
gi|17539482|ref|NP_501829.1| COLlagen structural gene (col-2) [C... 46 0.002
gi|39594094|emb|CAE70204.1| Hypothetical protein CBG16679 [Caeno... 46 0.002
gi|17543264|ref|NP_500133.1| COLlagen structural gene (col-108) ... 45 0.003
gi|48060128|gb|AAK68452.2| Collagen protein 108 [Caenorhabditis ... 45 0.003
gi|7378657|emb|CAB85466.1| putative cuticular collagen [Ascaris ... 45 0.003
gi|39598359|emb|CAE69052.1| Hypothetical protein CBG15061 [Caeno... 45 0.004
gi|32453014|gb|AAA96159.2| Collagen protein 33 [Caenorhabditis e... 45 0.004
gi|345339|pir||JC1448 collagen col-34 - Caenorhabditis elegans >... 45 0.005
gi|39580357|emb|CAE61462.1| Hypothetical protein CBG05354 [Caeno... 45 0.005
gi|17539490|ref|NP_500520.1| abnormal RAy Morphology RAM-4, COLl... 45 0.005
gi|17542966|ref|NP_501617.1| COLlagen structural gene (col-120) ... 44 0.008
gi|39592016|emb|CAE75236.1| Hypothetical protein CBG23187 [Caeno... 44 0.008
gi|39592038|emb|CAE75258.1| Hypothetical protein CBG23219 [Caeno... 44 0.008
gi|39592014|emb|CAE75234.1| Hypothetical protein CBG23185 [Caeno... 44 0.008
gi|39585732|emb|CAE59934.1| Hypothetical protein CBG03420 [Caeno... 43 0.014
gi|17561474|ref|NP_505886.1| COLlagen structural gene (29.3 kD) ... 43 0.014
gi|39584177|emb|CAE61552.1| Hypothetical protein CBG05461 [Caeno... 43 0.018
gi|17538876|ref|NP_502107.1| COLlagen structural gene (28.7 kD) ... 42 0.023
gi|17566746|ref|NP_505074.1| COLlagen structural gene (29.5 kD) ... 42 0.030
gi|39590411|emb|CAE66150.1| Hypothetical protein CBG11380 [Caeno... 42 0.030
gi|39593732|emb|CAE62024.1| Hypothetical protein CBG06035 [Caeno... 42 0.030
gi|17564278|ref|NP_505913.1| predicted CDS, COLlagen structural ... 42 0.030
gi|25145834|ref|NP_501273.2| COLlagen structural gene (col-14) [... 42 0.039
gi|84431|pir||JS0169 collagen col-14 - Caenorhabditis elegans >g... 42 0.039
gi|7497485|pir||T29810 hypothetical protein C46A5.3 - Caenorhabd... 42 0.039
gi|39595004|emb|CAE70872.1| Hypothetical protein CBG17662 [Caeno... 42 0.039
gi|17539484|ref|NP_501527.1| COLlagen structural gene (col-3) [C... 42 0.039
gi|39578930|emb|CAE57041.1| Hypothetical protein CBG24927 [Caeno... 42 0.039
gi|25153764|ref|NP_741423.1| COLlagen structural gene (28.9 kD) ... 41 0.051
gi|39580360|emb|CAE61465.1| Hypothetical protein CBG05357 [Caeno... 41 0.051
gi|39591778|emb|CAE71356.1| Hypothetical protein CBG18259 [Caeno... 40 0.088
gi|17540822|ref|NP_500071.1| COLlagen structural gene (col-105) ... 40 0.11
gi|17551374|ref|NP_510617.1| COLlagen structural gene (col-186) ... 40 0.11
gi|17555472|ref|NP_499410.1| COLlagen structural gene (29.2 kD) ... 40 0.11
gi|17540574|ref|NP_502700.1| COLlagen structural gene (col-133) ... 39 0.20
gi|39595279|emb|CAE60316.1| Hypothetical protein CBG03907 [Caeno... 37 0.74
gi|32565764|ref|NP_871702.1| COLlagen structural gene (col-95) [... 37 0.74
gi|17539488|ref|NP_500524.1| COLlagen structural gene (col-33) [... 37 0.74
gi|39586422|emb|CAE74080.1| Hypothetical protein CBG21735 [Caeno... 37 0.97
gi|32565788|ref|NP_871711.1| predicted CDS, COLlagen structural ... 37 0.97
gi|17507553|ref|NP_490679.1| COLlagen structural gene (col-45) [... 37 1.3
gi|39588210|emb|CAE68135.1| Hypothetical protein CBG13781 [Caeno... 37 1.3
gi|17543328|ref|NP_502808.1| COLlagen structural gene (col-134) ... 37 1.3
gi|17507951|ref|NP_491958.1| COLlagen structural gene (col-59) [... 36 1.7
gi|17539418|ref|NP_501561.1| COLlagen structural gene (col-119) ... 36 1.7
gi|39584782|emb|CAE67677.1| Hypothetical protein CBG13240 [Caeno... 36 2.2
gi|17551424|ref|NP_510247.1| COLlagen structural gene (col-183) ... 36 2.2
gi|39585707|emb|CAE59909.1| Hypothetical protein CBG03393 [Caeno... 35 2.8
gi|17538760|ref|NP_501867.1| COLlagen structural gene (29.1 kD) ... 35 2.8
gi|39584781|emb|CAE67676.1| Hypothetical protein CBG13239 [Caeno... 35 2.8
gi|39581447|emb|CAE74729.1| Hypothetical protein CBG22547 [Caeno... 35 3.7
gi|39588940|emb|CAE69570.1| Hypothetical protein CBG15782 [Caeno... 35 3.7
gi|17555582|ref|NP_497450.1| predicted CDS, tyrosine specific pr... 35 4.8
gi|39592242|emb|CAE75463.1| Hypothetical protein CBG23461 [Caeno... 35 4.8
gi|17563290|ref|NP_506095.1| COLlagen structural gene, SQuaT SQT... 35 4.8
gi|39579858|emb|CAE56438.1| Hypothetical protein CBG24139 [Caeno... 35 4.8
gi|15236112|ref|NP_194339.1| disease resistance protein RPS2 (CC... 35 4.8
gi|22087189|gb|AAM90871.1| RPS2 [Arabidopsis thaliana] 35 4.8
gi|22087165|gb|AAM90859.1| RPS2 [Arabidopsis thaliana] >gnl|BL_O... 35 4.8
gi|17507467|ref|NP_493503.1| aminopeptidase (1O931) [Caenorhabdi... 35 4.8
gi|115397|sp|P08124|CC01_CAEEL Cuticle collagen 1 precursor (Squ... 35 4.8
gi|39595798|emb|CAE67301.1| Hypothetical protein CBG12754 [Caeno... 34 8.2
gi|39596499|emb|CAE63118.1| Hypothetical protein CBG07415 [Caeno... 34 8.2
>gi|17536229|ref|NP_493913.1| COLlagen structural gene (col-40)
[Caenorhabditis elegans]
gi|7507766|pir||T32458 hypothetical protein T13B5.4 - Caenorhabditis
elegans
gi|2435590|gb|AAB71295.1| Collagen protein 40 [Caenorhabditis
elegans]
Length = 416
Score = 210 bits (535), Expect = 5e-53
Identities = 104/104 (100%), Positives = 104/104 (100%)
Frame = -1
Query: 1251 MEEKQKIAEAESLKKLAFFGISVSTIATLTAIIAVPMLYNYMQHVQSSLQNEVQYFLKVH 1072
MEEKQKIAEAESLKKLAFFGISVSTIATLTAIIAVPMLYNYMQHVQSSLQNEVQYFLKVH
Sbjct: 1 MEEKQKIAEAESLKKLAFFGISVSTIATLTAIIAVPMLYNYMQHVQSSLQNEVQYFLKVH 60
Query: 1071 GVKKNYFQVEFCKHRTDGLWDEFHRFETVKGVDSRIKRDTRSRR 940
GVKKNYFQVEFCKHRTDGLWDEFHRFETVKGVDSRIKRDTRSRR
Sbjct: 61 GVKKNYFQVEFCKHRTDGLWDEFHRFETVKGVDSRIKRDTRSRR 104
Score = 59.3 bits (142), Expect = 2e-07
Identities = 40/111 (36%), Positives = 40/111 (36%)
Frame = -1
Query: 336 CDHCPPPRTNFQTIPXXXXXXXXXXXXXXXXXXXXXXXLAFXXXXXXXXXXXXXXXXXXX 157
CDHCPPPRTNFQTIP LAF
Sbjct: 306 CDHCPPPRTNFQTIPSLGLVLSLGLGSDLGLGLSVGLDLAFGFGIGSGLGLGLGLCLCLG 365
Query: 156 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIYSGLGLGSNLVISPILGEQQ 4
DIYSGLGLGSNLVISPILGEQQ
Sbjct: 366 LGLCSVLCLRSGLGLDFDLSLGLGSDSVLDIYSGLGLGSNLVISPILGEQQ 416