Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= T13H5_6
(1503 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17536257|ref|NP_495799.1| splicing factor SF3a60 (57.5 kD) (2... 946 0.0
gi|25395605|pir||A88238 protein T13H5.4 [imported] - Caenorhabdi... 893 0.0
gi|39590012|emb|CAE61010.1| Hypothetical protein CBG04748 [Caeno... 884 0.0
gi|49618981|gb|AAT68075.1| splicesome-associated factor 61 [Dani... 512 e-144
gi|50759732|ref|XP_417755.1| PREDICTED: similar to Splicing fact... 510 e-143
gi|551450|emb|CAA57388.1| splicing factor SF3a60 [Homo sapiens] 508 e-142
gi|5803167|ref|NP_006793.1| splicing factor 3a, subunit 3, 60kDa... 508 e-142
gi|22095003|ref|NP_083433.1| splicing factor 3a, subunit 3; spli... 507 e-142
gi|47214415|emb|CAG00256.1| unnamed protein product [Tetraodon n... 504 e-141
gi|17137118|ref|NP_477114.1| CG2925-PA [Drosophila melanogaster]... 473 e-132
gi|31207609|ref|XP_312771.1| ENSANGP00000020368 [Anopheles gambi... 421 e-116
gi|28301939|gb|AAO38832.1| putative splicing factor [Oryza sativ... 359 8e-98
gi|42567684|ref|NP_196234.3| splicing factor-related [Arabidopsi... 348 2e-94
gi|48143011|ref|XP_397399.1| similar to CG2925-PA [Apis mellifera] 314 3e-84
gi|46122959|ref|XP_386033.1| hypothetical protein FG05857.1 [Gib... 290 6e-77
gi|49116553|ref|XP_412152.1| hypothetical protein AN8015.2 [Aspe... 289 1e-76
gi|19112129|ref|NP_595337.1| spliceosome associated protein sap6... 280 6e-74
gi|38105812|gb|EAA52194.1| hypothetical protein MG04886.4 [Magna... 275 2e-72
gi|49080458|ref|XP_403745.1| hypothetical protein UM06130.1 [Ust... 267 6e-70
gi|32412496|ref|XP_326728.1| related to PRP9 protein [MIPS] [Neu... 264 5e-69
gi|50259273|gb|EAL21946.1| hypothetical protein CNBC0860 [Crypto... 260 7e-68
gi|50422471|ref|XP_459802.1| unnamed protein product [Debaryomyc... 181 3e-44
gi|23613765|ref|NP_704786.1| splicesome-associated protein, puta... 179 2e-43
gi|32399043|emb|CAD98283.1| splicing factor 3a subunit 3, possib... 179 2e-43
gi|50555604|ref|XP_505210.1| hypothetical protein [Yarrowia lipo... 176 2e-42
gi|12854243|dbj|BAB29971.1| unnamed protein product [Mus musculus] 158 3e-37
gi|23484312|gb|EAA19688.1| splicing factor 3a subunit 3 [Plasmod... 158 3e-37
gi|46436177|gb|EAK95544.1| hypothetical protein CaO19.3178 [Cand... 146 1e-33
gi|6320174|ref|NP_010254.1| Subunit of the SF3a splicing factor ... 142 3e-32
gi|37361872|gb|AAQ91049.1| LRRGT00093 [Rattus norvegicus] 139 2e-31
gi|50312291|ref|XP_456178.1| unnamed protein product [Kluyveromy... 132 2e-29
gi|50291721|ref|XP_448293.1| unnamed protein product [Candida gl... 130 8e-29
gi|45190522|ref|NP_984776.1| AEL085Wp [Eremothecium gossypii] >g... 114 5e-24
gi|10801143|dbj|BAB16680.1| putative splicesome associated prote... 106 1e-21
gi|19074537|ref|NP_586043.1| hypothetical protein [Encephalitozo... 69 2e-10
gi|22122373|ref|NP_666055.1| cDNA sequence BC031781 [Mus musculu... 52 4e-05
gi|50740167|ref|XP_419383.1| PREDICTED: similar to cDNA sequence... 50 2e-04
gi|39590532|emb|CAE66272.1| Hypothetical protein CBG11516 [Caeno... 46 0.003
gi|21751360|dbj|BAC03952.1| unnamed protein product [Homo sapiens] 45 0.003
gi|40255125|ref|NP_689821.2| hypothetical protein FLJ35382 [Homo... 45 0.003
gi|47123958|gb|AAH70765.1| MGC83793 protein [Xenopus laevis] 45 0.003
gi|48734699|gb|AAH71563.1| FLJ35382 protein [Homo sapiens] 45 0.003
gi|34881063|ref|XP_222998.2| similar to hypothetical protein MGC... 44 0.008
gi|47210375|emb|CAF95570.1| unnamed protein product [Tetraodon n... 42 0.051
gi|34911194|ref|NP_916944.1| P0019E03.13 [Oryza sativa (japonica... 42 0.051
gi|32451928|gb|AAH54640.1| Unknown (protein for IMAGE:6799173) [... 41 0.066
gi|15234038|ref|NP_192009.1| ubiquitin family protein [Arabidops... 40 0.11
gi|15669231|ref|NP_248036.1| DNA-directed RNA polymerase, subuni... 40 0.15
gi|2127864|pir||A64430 DNA-directed RNA polymerase (EC 2.7.7.6) ... 40 0.15
gi|17561336|ref|NP_506378.1| splicing factor 3a 60kDa like (5O10... 39 0.33
gi|7504070|pir||T22586 hypothetical protein F53F4.14 - Caenorhab... 39 0.33
gi|33622231|ref|NP_891878.1| unknown [Cryptophlebia leucotreta g... 39 0.33
gi|23613656|ref|NP_704677.1| hypothetical protein, conserved [Pl... 38 0.56
gi|9369404|gb|AAF87152.1| T23E23.17 [Arabidopsis thaliana] 38 0.56
gi|23508409|ref|NP_701078.1| hypothetical protein [Plasmodium fa... 38 0.73
gi|2129174|pir||A64505 P115 homolog - Methanococcus jannaschii 37 0.95
gi|15669839|ref|NP_248653.1| chromosome segretation protein (smc... 37 0.95
gi|18913066|gb|AAL79505.1| Igr7p [Tetrahymena thermophila] 37 1.2
gi|19075736|ref|NP_588236.1| putative nuclear pore complex-assoc... 37 1.2
gi|48127605|ref|XP_396612.1| similar to blackjack [Apis mellifera] 37 1.2
gi|30679855|ref|NP_850523.1| splicing factor-related [Arabidopsi... 36 2.1
gi|46249494|gb|AAH68689.1| MGC81098 protein [Xenopus laevis] 36 2.8
gi|11276955|pir||A59236 embryonic muscle myosin heavy chain - se... 36 2.8
gi|50543606|ref|XP_499969.1| hypothetical protein [Yarrowia lipo... 35 3.6
gi|11496688|ref|NP_045470.1| B. burgdorferi predicted coding reg... 35 3.6
gi|23508944|ref|NP_701612.1| hypothetical protein [Plasmodium fa... 35 3.6
gi|15606107|ref|NP_213484.1| hypothetical protein aq_707 [Aquife... 35 3.6
gi|17570377|ref|NP_510801.1| predicted CDS, putative protein, wi... 35 4.7
gi|24954643|gb|AAN64691.1| M protein [Streptococcus pyogenes] 35 4.7
gi|23619203|ref|NP_705165.1| hypothetical malaria antigen [Plasm... 35 4.7
gi|6324103|ref|NP_014172.1| Protein that may function as a cocha... 35 6.2
gi|7500584|pir||T21834 hypothetical protein F36A2.4 - Caenorhabd... 35 6.2
gi|50749815|ref|XP_421767.1| PREDICTED: similar to CTCL tumor an... 35 6.2
gi|17507181|ref|NP_492381.1| fibronectin, type III and ion trans... 35 6.2
gi|23483514|gb|EAA19159.1| hypothetical protein [Plasmodium yoel... 35 6.2
gi|1742985|emb|CAA71115.1| beta-lactamase [Bacillus licheniformis] 34 8.1
gi|45198804|ref|NP_985833.1| AFR286Wp [Eremothecium gossypii] >g... 34 8.1
gi|20150077|pdb|1I2S|A Chain A, Beta-Lactamase From Bacillus Lic... 34 8.1
gi|48124825|ref|XP_396567.1| similar to CG12071-PB [Apis mellifera] 34 8.1
gi|23508980|ref|NP_701648.1| hypothetical protein [Plasmodium fa... 34 8.1
gi|40255106|ref|NP_689585.2| myomesin family, member 3 [Homo sap... 34 8.1
gi|39595502|emb|CAE60540.1| Hypothetical protein CBG04167 [Caeno... 34 8.1
>gi|17536257|ref|NP_495799.1| splicing factor SF3a60 (57.5 kD) (2I814)
[Caenorhabditis elegans]
gi|7507806|pir||T24901 hypothetical protein T13H5.4 - Caenorhabditis
elegans
gi|5824606|emb|CAA91420.2| Hypothetical protein T13H5.4
[Caenorhabditis elegans]
Length = 500
Score = 946 bits (2446), Expect = 0.0
Identities = 473/500 (94%), Positives = 473/500 (94%)
Frame = -1
Query: 1503 MDSCLETIRNLHEERERLIDITVKEKIAEKLTHKAKVNSEQRVKTFVDRYYSVSAELAKF 1324
MDSCLETIRNLHEERERLIDITVKEKIAEKLTHKAKVNSEQRVKTFVDRYYSVSAELAKF
Sbjct: 1 MDSCLETIRNLHEERERLIDITVKEKIAEKLTHKAKVNSEQRVKTFVDRYYSVSAELAKF 60
Query: 1323 YKDEDGSKSMEMDSVSGPNEFAEFYSRLKVIKDAHRRNPDELAEPLTVEFQKINEEIINP 1144
YKDEDGSKSMEMDSVSGPNEFAEFYSRLKVIKDAHRRNPDELAEPLTVEFQKINEEIINP
Sbjct: 61 YKDEDGSKSMEMDSVSGPNEFAEFYSRLKVIKDAHRRNPDELAEPLTVEFQKINEEIINP 120
Query: 1143 ERAEPDMVEFSDEEAYGRFLDLHAQYDKFINLKNIKRVDYMTYLLNFEKFTEIPKNTTKK 964
ERAEPDMVEFSDEEAYGRFLDLHAQYDKFINLKNIKRVDYMTYLLNFEKFTEIPKNTTKK
Sbjct: 121 ERAEPDMVEFSDEEAYGRFLDLHAQYDKFINLKNIKRVDYMTYLLNFEKFTEIPKNTTKK 180
Query: 963 TGAYKEYINSLKDYLVSFMQRTRPLHDLDSVFSEVNQTVERAFKAGNLPGWEADKNKNGP 784
TGAYKEYINSLKDYLVSFMQRTRPLHDLDSVFSEVNQTVERAFKAGNLPGWEADKNKNGP
Sbjct: 181 TGAYKEYINSLKDYLVSFMQRTRPLHDLDSVFSEVNQTVERAFKAGNLPGWEADKNKNGP 240
Query: 783 QAAAVDLSPYNSAXXXXXXXXXXLKGALMAIGLKCGGTLKERADRLFATKGHKLSDLEKA 604
QAAAVDLSPYNSA LKGALMAIGLKCGGTLKERADRLFATKGHKLSDLEKA
Sbjct: 241 QAAAVDLSPYNSAEELEGLGLERLKGALMAIGLKCGGTLKERADRLFATKGHKLSDLEKA 300
Query: 603 AMSSNNSDAEKQNAKNLTLAQTEAHIMALADILAEERTGTRENVERKQARSAGXXXXXXX 424
AMSSNNSDAEKQNAKNLTLAQTEAHIMALADILAEERTGTRENVERKQARSAG
Sbjct: 301 AMSSNNSDAEKQNAKNLTLAQTEAHIMALADILAEERTGTRENVERKQARSAGEVEEEEE 360
Query: 423 XXXXXXXXXXIDESAPYNPKNLPLGWDGKPIPYWLYKLHGLNLSYSCEICGNQTYKGPKA 244
IDESAPYNPKNLPLGWDGKPIPYWLYKLHGLNLSYSCEICGNQTYKGPKA
Sbjct: 361 EEIVIEEEEEIDESAPYNPKNLPLGWDGKPIPYWLYKLHGLNLSYSCEICGNQTYKGPKA 420
Query: 243 FQKHFNEWRHSHGMRCLGIPNTSHFANITKIKDALDLWNKLKTEKEMAKWNPDIDEEYED 64
FQKHFNEWRHSHGMRCLGIPNTSHFANITKIKDALDLWNKLKTEKEMAKWNPDIDEEYED
Sbjct: 421 FQKHFNEWRHSHGMRCLGIPNTSHFANITKIKDALDLWNKLKTEKEMAKWNPDIDEEYED 480
Query: 63 SSGNVVTRKMYEDLKRQGLL 4
SSGNVVTRKMYEDLKRQGLL
Sbjct: 481 SSGNVVTRKMYEDLKRQGLL 500
>gi|25395605|pir||A88238 protein T13H5.4 [imported] - Caenorhabditis
elegans
Length = 835
Score = 893 bits (2307), Expect = 0.0
Identities = 445/473 (94%), Positives = 446/473 (94%)
Frame = -1
Query: 1422 AEKLTHKAKVNSEQRVKTFVDRYYSVSAELAKFYKDEDGSKSMEMDSVSGPNEFAEFYSR 1243
+EKLTHKAKVNSEQRVKTFVDRYYSVSAELAKFYKDEDGSKSMEMDSVSGPNEFAEFYSR
Sbjct: 363 SEKLTHKAKVNSEQRVKTFVDRYYSVSAELAKFYKDEDGSKSMEMDSVSGPNEFAEFYSR 422
Query: 1242 LKVIKDAHRRNPDELAEPLTVEFQKINEEIINPERAEPDMVEFSDEEAYGRFLDLHAQYD 1063
LKVIKDAHRRNPDELAEPLTVEFQKINEEIINPERAEPDMVEFSDEEAYGRFLDLHAQYD
Sbjct: 423 LKVIKDAHRRNPDELAEPLTVEFQKINEEIINPERAEPDMVEFSDEEAYGRFLDLHAQYD 482
Query: 1062 KFINLKNIKRVDYMTYLLNFEKFTEIPKNTTKKTGAYKEYINSLKDYLVSFMQRTRPLHD 883
KFINLKNIKRVDYMTYLLNFEKFTEIPKNTTKKTGAYKEYINSLKDYLVSFMQRTRPLHD
Sbjct: 483 KFINLKNIKRVDYMTYLLNFEKFTEIPKNTTKKTGAYKEYINSLKDYLVSFMQRTRPLHD 542
Query: 882 LDSVFSEVNQTVERAFKAGNLPGWEADKNKNGPQAAAVDLSPYNSAXXXXXXXXXXLKGA 703
LDSVFSEVNQTVERAFKAGNLPGWEADKNKNGPQAAAVDLSPYNSA LKGA
Sbjct: 543 LDSVFSEVNQTVERAFKAGNLPGWEADKNKNGPQAAAVDLSPYNSAEELEGLGLERLKGA 602
Query: 702 LMAIGLKCGGTLKERADRLFATKGHKLSDLEKAAMSSNNSDAEKQNAKNLTLAQTEAHIM 523
LMAIGLKCGGTLKERADRLFATKGHKLSDLEKAAMSSNNSDAEKQNAKNLTLAQTEAHIM
Sbjct: 603 LMAIGLKCGGTLKERADRLFATKGHKLSDLEKAAMSSNNSDAEKQNAKNLTLAQTEAHIM 662
Query: 522 ALADILAEERTGTRENVERKQARSAGXXXXXXXXXXXXXXXXXIDESAPYNPKNLPLGWD 343
ALADILAEERTGTRENVERKQARSAG IDESAPYNPKNLPLGWD
Sbjct: 663 ALADILAEERTGTRENVERKQARSAGEVEEEEEEEIVIEEEEEIDESAPYNPKNLPLGWD 722
Query: 342 GKPIPYWLYKLHGLNLSYSCEICGNQTYKGPKAFQKHFNEWRHSHGMRCLGIPNTSHFAN 163
GKPIPYWLYKLHGLNLSYSCEICGNQTYKGPKAFQKHFNEWRHSHGMRCLGIPNTSHFAN
Sbjct: 723 GKPIPYWLYKLHGLNLSYSCEICGNQTYKGPKAFQKHFNEWRHSHGMRCLGIPNTSHFAN 782
Query: 162 ITKIKDALDLWNKLKTEKEMAKWNPDIDEEYEDSSGNVVTRKMYEDLKRQGLL 4
ITKIKDALDLWNKLKTEKEMAKWNPDIDEEYEDSSGNVVTRKMYEDLKRQGLL
Sbjct: 783 ITKIKDALDLWNKLKTEKEMAKWNPDIDEEYEDSSGNVVTRKMYEDLKRQGLL 835
>gi|39590012|emb|CAE61010.1| Hypothetical protein CBG04748
[Caenorhabditis briggsae]
Length = 501
Score = 884 bits (2284), Expect = 0.0
Identities = 436/501 (87%), Positives = 460/501 (91%), Gaps = 1/501 (0%)
Frame = -1
Query: 1503 MDSCLETIRNLHEERERLIDITVKEKIAEKLTHKAKVNSEQRVKTFVDRYYSVSAELAKF 1324
MDSCLETIRNLHEERERLID TVKEKIAEKLTHKAKVNSE RVK FVDRY+ VSAELAKF
Sbjct: 1 MDSCLETIRNLHEERERLIDSTVKEKIAEKLTHKAKVNSELRVKKFVDRYHDVSAELAKF 60
Query: 1323 YKDEDGSKSMEMDSVSGPNEFAEFYSRLKVIKDAHRRNPDELAEPLTVEFQKINEEIINP 1144
YKDED SKS+EMD+VSGPNEFAEFYSRLKVIKDAHRRNPDELAEPLTVEFQKIN++IINP
Sbjct: 61 YKDEDNSKSIEMDAVSGPNEFAEFYSRLKVIKDAHRRNPDELAEPLTVEFQKINDDIINP 120
Query: 1143 ERAEPDMVEFSDEEAYGRFLDLHAQYDKFINLKNIKRVDYMTYLLNFEKFTEIPKNTTKK 964
ERAEPDMVEFSDEEAYGRFLDLHAQYDKFINLKNIKRVDYMTYLLNFEKFT+IPK TTKK
Sbjct: 121 ERAEPDMVEFSDEEAYGRFLDLHAQYDKFINLKNIKRVDYMTYLLNFEKFTDIPKQTTKK 180
Query: 963 TGAYKEYINSLKDYLVSFMQRTRPLHDLDSVFSEVNQTVERAFKAGNLPGWEADKNKNGP 784
TGAYKEY+NSLKDYLVSF+QRTRPLHDL+++F+EV+ T++RAF+AGNLPGWEADK+K P
Sbjct: 181 TGAYKEYVNSLKDYLVSFIQRTRPLHDLETMFAEVDGTIQRAFEAGNLPGWEADKSKTAP 240
Query: 783 -QAAAVDLSPYNSAXXXXXXXXXXLKGALMAIGLKCGGTLKERADRLFATKGHKLSDLEK 607
QAAAVDLSPYNSA LKGALMAIGLKCGGTLKERA+RLFATKGHKLSDLEK
Sbjct: 241 SQAAAVDLSPYNSAEELEGLGLERLKGALMAIGLKCGGTLKERAERLFATKGHKLSDLEK 300
Query: 606 AAMSSNNSDAEKQNAKNLTLAQTEAHIMALADILAEERTGTRENVERKQARSAGXXXXXX 427
AAM+SNNS+ +KQ AKNL LAQTE HIMA+A+ILAEERTGTRENVERKQARSAG
Sbjct: 301 AAMASNNSEVDKQKAKNLALAQTEGHIMAMAEILAEERTGTRENVERKQARSAGEVEEEE 360
Query: 426 XXXXXXXXXXXIDESAPYNPKNLPLGWDGKPIPYWLYKLHGLNLSYSCEICGNQTYKGPK 247
+DESAPYNPKNLPLGWDGKPIPYWLYKLHGLNLSYSCEICGNQTYKGPK
Sbjct: 361 EEEVVIEEEEEVDESAPYNPKNLPLGWDGKPIPYWLYKLHGLNLSYSCEICGNQTYKGPK 420
Query: 246 AFQKHFNEWRHSHGMRCLGIPNTSHFANITKIKDALDLWNKLKTEKEMAKWNPDIDEEYE 67
AFQKHFNEWRHSHGMRCLGIPNTSHFANITKIKDALDLWNKLKTEKEMAKWNPDIDEEYE
Sbjct: 421 AFQKHFNEWRHSHGMRCLGIPNTSHFANITKIKDALDLWNKLKTEKEMAKWNPDIDEEYE 480
Query: 66 DSSGNVVTRKMYEDLKRQGLL 4
DSSGNVVTRKMYEDLKRQGLL
Sbjct: 481 DSSGNVVTRKMYEDLKRQGLL 501