Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= T20D3_1
         (611 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17540506|ref|NP_501638.1| putative protein (96.7 kD) (4K91) [...   320   1e-86
gi|39579836|emb|CAE56845.1| Hypothetical protein CBG24672 [Caeno...   207   2e-52
gi|902781|gb|AAC54391.1| hemagglutinin 1 chain                         32   7.2
gi|32165552|gb|AAP71990.1| hemagglutinin [Influenza A virus (A/p...    32   7.2
gi|32165586|gb|AAP72007.1| hemagglutinin [Influenza A virus (A/d...    32   7.2
gi|29654959|ref|NP_820651.1| stress response sigma factor RpoS [...    32   9.4


>gi|17540506|ref|NP_501638.1| putative protein (96.7 kD) (4K91)
            [Caenorhabditis elegans]
 gi|7503804|pir||T22422 hypothetical protein F49C12.15 -
            Caenorhabditis elegans
 gi|3877375|emb|CAA92521.1| Hypothetical protein F49C12.15
            [Caenorhabditis elegans]
 gi|3879944|emb|CAA92493.1| Hypothetical protein F49C12.15
            [Caenorhabditis elegans]
          Length = 869

 Score =  320 bits (821), Expect = 1e-86
 Identities = 169/202 (83%), Positives = 169/202 (83%)
 Frame = +3

Query: 3    VAASTGPRSASKSPKGTLRVKETKVIREVRQEDGKPPEISXXXXXXXXXXXXNLSERLXX 182
            VAASTGPRSASKSPKGTLRVKETKVIREVRQEDGKPPEIS            NLSERL
Sbjct: 668  VAASTGPRSASKSPKGTLRVKETKVIREVRQEDGKPPEISEKKEETVKEEKVNLSERLRA 727

Query: 183  XXXXXXXXXXXLKRTFNQTDESNIVTLSAVKETHQTLEMTPIKVNSETVPSTSYGQRAFP 362
                       LKRTFNQTDESNIVTLSAVKETHQTLEMTPIKVNSETVPSTSYGQRAFP
Sbjct: 728  RSRASSPATPTLKRTFNQTDESNIVTLSAVKETHQTLEMTPIKVNSETVPSTSYGQRAFP 787

Query: 363  ESVQLDMLIDKKRLVLNVNFMLLAEKHPEVEILGFTFKGQKLWEKSSEWNLTSANTTSHT 542
            ESVQLDMLIDKKRLVLNVNFMLLAEKHPEVEILGFTFKGQKLWEKSSEWNLTSANTTSHT
Sbjct: 788  ESVQLDMLIDKKRLVLNVNFMLLAEKHPEVEILGFTFKGQKLWEKSSEWNLTSANTTSHT 847

Query: 543  KTIARQASNILGXXXXXXXXQK 608
            KTIARQASNILG        QK
Sbjct: 848  KTIARQASNILGDEEKKDEEQK 869




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