Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= T20G5_11
(1371 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17555176|ref|NP_499263.1| putative membrane protein, family 8... 924 0.0
gi|39590605|emb|CAE64975.1| Hypothetical protein CBG09809 [Caeno... 857 0.0
gi|630651|pir||S42371 hypothetical protein T20G5.4 - Caenorhabdi... 822 0.0
gi|17557055|ref|NP_498717.1| putative membrane protein, family 8... 484 e-135
gi|39589646|emb|CAE66881.1| Hypothetical protein CBG12260 [Caeno... 484 e-135
gi|39587715|emb|CAE58653.1| Hypothetical protein CBG01822 [Caeno... 393 e-108
gi|17538330|ref|NP_502523.1| putative membrane protein, family 8... 392 e-107
gi|17538332|ref|NP_502524.1| predicted CDS, putative membrane pr... 380 e-104
gi|44889006|sp|P34319|YKT8_CAEEL Hypothetical protein C07A9.8 in... 350 6e-95
gi|39593733|emb|CAE62025.1| Hypothetical protein CBG06036 [Caeno... 349 8e-95
gi|39590780|emb|CAE65153.1| Hypothetical protein CBG10021 [Caeno... 347 4e-94
gi|17538878|ref|NP_502108.1| putative membrane protein, family 8... 346 6e-94
gi|17552094|ref|NP_499142.1| putative membrane protein, family 8... 344 3e-93
gi|39579041|emb|CAE56138.1| Hypothetical protein CBG23750 [Caeno... 342 9e-93
gi|39585641|emb|CAE59843.1| Hypothetical protein CBG03316 [Caeno... 329 1e-88
gi|32566098|ref|NP_872102.1| putative membrane protein, family 8... 326 7e-88
gi|17544520|ref|NP_502353.1| putative membrane protein, family 8... 326 7e-88
gi|39586926|emb|CAE62861.1| Hypothetical protein CBG07044 [Caeno... 316 9e-85
gi|32566051|ref|NP_502007.2| putative membrane protein, family 8... 311 2e-83
gi|17531405|ref|NP_493632.1| putative membrane protein, family 8... 309 9e-83
gi|7508141|pir||T28715 hypothetical protein T21D12.9b - Caenorha... 303 6e-81
gi|17542474|ref|NP_499895.1| cysteine-rich flanking region, N-te... 303 6e-81
gi|39594972|emb|CAE70840.1| Hypothetical protein CBG17620 [Caeno... 302 1e-80
gi|17531409|ref|NP_493631.1| vitelliform macular dystrophy famil... 298 2e-79
gi|39586925|emb|CAE62860.1| Hypothetical protein CBG07043 [Caeno... 298 3e-79
gi|17505941|ref|NP_493472.1| putative membrane protein, family 8... 290 7e-77
gi|38503324|sp|Q8BGM5|VML1_MOUSE Bestrophin 2 (Vitelliform macul... 285 2e-75
gi|41613003|gb|AAS09923.1| vitelliform macular dystrophy 2-like ... 285 2e-75
gi|27881775|gb|AAH43854.1| MGC53680 protein [Xenopus laevis] >gn... 285 2e-75
gi|39588164|emb|CAE68089.1| Hypothetical protein CBG13726 [Caeno... 283 5e-75
gi|34851530|ref|XP_344743.1| similar to vitelliform macular dyst... 281 3e-74
gi|7506695|pir||T24210 hypothetical protein R13.3 - Caenorhabdit... 281 3e-74
gi|34870281|ref|XP_216501.2| similar to vitelliform macular dyst... 280 7e-74
gi|38503353|sp|Q8NFU1|VML1_HUMAN Bestrophin 2 (Vitelliform macul... 278 3e-73
gi|41216882|gb|AAR99655.1| bestrophin 2 [Homo sapiens] 278 3e-73
gi|45360603|ref|NP_988974.1| hypothetical protein MGC75942 [Xeno... 276 8e-73
gi|39586146|emb|CAE69222.1| Hypothetical protein CBG15262 [Caeno... 275 2e-72
gi|30526076|gb|AAP32200.1| bestrophin-2b [Xenopus laevis] 275 2e-72
gi|23397576|ref|NP_695006.1| vitelliform macular dystrophy 2-lik... 274 4e-72
gi|7507956|pir||T16885 hypothetical protein T19C3.1 - Caenorhabd... 270 6e-71
gi|25151861|ref|NP_497218.2| predicted CDS, putative membrane pr... 270 6e-71
gi|50728328|ref|XP_416091.1| PREDICTED: similar to Bestrophin 4 ... 265 1e-69
gi|50747956|ref|XP_421055.1| PREDICTED: similar to bestrophin [G... 265 1e-69
gi|21358115|ref|NP_652603.1| CG6264-PA [Drosophila melanogaster]... 265 1e-69
gi|31240707|ref|XP_320767.1| ENSANGP00000014086 [Anopheles gambi... 265 2e-69
gi|48096304|ref|XP_392428.1| similar to CG10173-PA [Apis mellifera] 261 3e-68
gi|34861871|ref|XP_219573.2| similar to vitelliform macular dyst... 259 8e-68
gi|47220264|emb|CAG03298.1| unnamed protein product [Tetraodon n... 257 4e-67
gi|41612969|gb|AAS09921.1| vitelliform macular dystrophy 2-like ... 256 7e-67
gi|21734844|gb|AAM76997.1| vitelliform macular dystrophy 2-like ... 256 1e-66
gi|38503351|sp|Q8N1M1|VML3_HUMAN Bestrophin 4 (Vitelliform macul... 256 1e-66
gi|28551155|ref|XP_129203.2| vitelliform macular dystrophy 2 hom... 255 2e-66
gi|50233765|ref|NP_036043.1| bestrophin; best macular dystrophy ... 254 3e-66
gi|17543096|ref|NP_500411.1| predicted CDS, vitelliform macular ... 249 8e-65
gi|34865050|ref|XP_235161.2| similar to vitelliform macular dyst... 249 8e-65
gi|21703776|ref|NP_663363.1| vitelliform macular dystrophy 2-lik... 249 1e-64
gi|34013781|gb|AAQ56048.1| bestrophin [Macaca fascicularis] >gnl... 247 4e-64
gi|4759310|ref|NP_004174.1| bestrophin [Homo sapiens] >gnl|BL_OR... 246 9e-64
gi|38090777|ref|XP_356501.1| similar to vitelliform macular dyst... 245 2e-63
gi|31210675|ref|XP_314304.1| ENSANGP00000012665 [Anopheles gambi... 244 3e-63
gi|2497031|sp|Q09379|YS63_CAEEL Very hypothetical protein ZK675.... 244 3e-63
gi|8923137|ref|NP_060152.1| vitelliform macular dystrophy 2-like... 244 5e-63
gi|39597589|emb|CAE59819.1| Hypothetical protein CBG03286 [Caeno... 243 6e-63
gi|45551518|ref|NP_729159.2| CG10173-PA [Drosophila melanogaster... 237 6e-61
gi|24664569|ref|NP_730039.1| CG12327-PA [Drosophila melanogaster... 236 9e-61
gi|39583023|emb|CAE71802.1| Hypothetical protein CBG18813 [Caeno... 236 1e-60
gi|33589428|gb|AAQ22481.1| RE18408p [Drosophila melanogaster] 234 4e-60
gi|47210710|emb|CAF90002.1| unnamed protein product [Tetraodon n... 224 4e-57
gi|39593542|emb|CAE61834.1| Hypothetical protein CBG05804 [Caeno... 219 9e-56
gi|24664565|ref|NP_730038.1| CG7259-PA [Drosophila melanogaster]... 218 3e-55
gi|47224534|emb|CAG08784.1| unnamed protein product [Tetraodon n... 218 3e-55
gi|17538596|ref|NP_500706.1| putative membrane protein, family 8... 211 2e-53
gi|17506139|ref|NP_493480.1| putative membrane protein, family 8... 204 3e-51
gi|27371320|gb|AAH41664.1| VMD2 protein [Homo sapiens] 204 5e-51
gi|17511109|ref|NP_493478.1| putative membrane protein, family 8... 194 4e-48
gi|39583576|emb|CAE65680.1| Hypothetical protein CBG10747 [Caeno... 191 3e-47
gi|17506141|ref|NP_493482.1| putative membrane protein, family 8... 191 3e-47
gi|3335161|gb|AAC64344.1| bestrophin [Homo sapiens] 188 2e-46
gi|38078711|ref|XP_143934.3| similar to vitelliform macular dyst... 185 2e-45
gi|39582077|emb|CAE63720.1| Hypothetical protein CBG08243 [Caeno... 182 2e-44
gi|17559672|ref|NP_507036.1| vitelliform macular dystrophy famil... 177 7e-43
gi|17540114|ref|NP_501784.1| vitelliform macular dystrophy (4K66... 176 1e-42
gi|41713442|sp|Q94175|YCEL_CAEEL Hypothetical protein C43G2.4 in... 174 4e-42
gi|39593373|emb|CAE64843.1| Hypothetical protein CBG09639 [Caeno... 173 8e-42
gi|39585767|emb|CAE59969.1| Hypothetical protein CBG03460 [Caeno... 173 1e-41
gi|39584139|emb|CAE61514.1| Hypothetical protein CBG05414 [Caeno... 171 5e-41
gi|39587888|emb|CAE67906.1| Hypothetical protein CBG13503 [Caeno... 169 1e-40
gi|17539168|ref|NP_501000.1| vitelliform macular dystrophy famil... 168 3e-40
gi|17544172|ref|NP_502846.1| predicted CDS, vitelliform macular ... 167 7e-40
gi|7495728|pir||T15468 hypothetical protein C09B9.3 - Caenorhabd... 164 3e-39
gi|17511107|ref|NP_493479.1| predicted CDS, putative membrane pr... 161 3e-38
gi|17560482|ref|NP_505708.1| putative membrane protein, family 8... 159 2e-37
gi|25396597|pir||H89192 protein F32G8.4 [imported] - Caenorhabdi... 159 2e-37
gi|22800661|gb|AAH15220.1| VMD2 protein [Homo sapiens] 151 3e-35
gi|38503268|sp|Q8WMR7|VMD2_PIG Bestrophin 1 (Vitelliform macular... 145 2e-33
gi|7511358|pir||T28037 hypothetical protein ZK849.4 - Caenorhabd... 140 7e-32
gi|48101850|ref|XP_395231.1| similar to ENSANGP00000014086 [Apis... 125 2e-27
gi|47186308|emb|CAG13446.1| unnamed protein product [Tetraodon n... 119 2e-25
gi|50751490|ref|XP_422424.1| PREDICTED: similar to vitelliform m... 117 8e-25
gi|47183229|emb|CAG13629.1| unnamed protein product [Tetraodon n... 111 5e-23
gi|39585918|emb|CAE68207.1| Hypothetical protein CBG13875 [Caeno... 106 1e-21
gi|33285175|gb|AAQ01525.1| Hypothetical protein R13A1.9 [Caenorh... 102 2e-20
gi|22748927|ref|NP_689652.1| vitelliform macular dystrophy 2-lik... 86 2e-15
gi|39578884|emb|CAE56063.1| Hypothetical protein CBG23639 [Caeno... 74 1e-11
gi|1945426|gb|AAB52586.1| RFP family member; the RFP family is k... 60 1e-07
gi|50763657|ref|XP_426781.1| PREDICTED: similar to vitelliform m... 56 2e-06
gi|39583575|emb|CAE65679.1| Hypothetical protein CBG10746 [Caeno... 51 7e-05
gi|14249356|ref|NP_116124.1| hypothetical protein MGC13168 [Homo... 46 0.002
gi|6136263|sp|O88870|VMD2_MOUSE Bestrophin 1 (Vitelliform macula... 46 0.002
gi|26990020|ref|NP_745445.1| RND efflux transporter [Pseudomonas... 37 1.4
gi|28564938|gb|AAO32553.1| AKR1 [Saccharomyces kluyveri] 35 5.4
gi|45551515|ref|NP_729053.2| CG10671-PB [Drosophila melanogaster... 34 7.1
gi|16198091|gb|AAL13842.1| LD30661p [Drosophila melanogaster] 34 7.1
gi|24658203|ref|NP_647944.2| CG10671-PA [Drosophila melanogaster... 34 7.1
>gi|17555176|ref|NP_499263.1| putative membrane protein, family 8
(53.1 kD) (3L303) [Caenorhabditis elegans]
gi|20981724|sp|P34577|YNX4_CAEEL Hypothetical protein T20G5.4 in
chromosome III
gi|15718209|emb|CAA83005.2| Hypothetical protein T20G5.4
[Caenorhabditis elegans]
Length = 456
Score = 924 bits (2387), Expect = 0.0
Identities = 448/448 (100%), Positives = 448/448 (100%)
Frame = +1
Query: 1 MTVSYNQSVATSRPWTFLALIFRWRGSVWSAIWIQYSVWLGLYFLVSAIYRFILSAYQQQ 180
MTVSYNQSVATSRPWTFLALIFRWRGSVWSAIWIQYSVWLGLYFLVSAIYRFILSAYQQQ
Sbjct: 1 MTVSYNQSVATSRPWTFLALIFRWRGSVWSAIWIQYSVWLGLYFLVSAIYRFILSAYQQQ 60
Query: 181 IFVRLVDYVNSRMSYVPLDWMLGFFIAGVLRRFWYLYDIIGFIDNIACSTATYIRGDSER 360
IFVRLVDYVNSRMSYVPLDWMLGFFIAGVLRRFWYLYDIIGFIDNIACSTATYIRGDSER
Sbjct: 61 IFVRLVDYVNSRMSYVPLDWMLGFFIAGVLRRFWYLYDIIGFIDNIACSTATYIRGDSER 120
Query: 361 AKQYRRNIIRYCELTQVLIFRDLSMKARKRFPTLDTVAAAGFMMPHEKANFDLIQYNYNK 540
AKQYRRNIIRYCELTQVLIFRDLSMKARKRFPTLDTVAAAGFMMPHEKANFDLIQYNYNK
Sbjct: 121 AKQYRRNIIRYCELTQVLIFRDLSMKARKRFPTLDTVAAAGFMMPHEKANFDLIQYNYNK 180
Query: 541 YFLPFNWAWALVYNARKEGLIEGDYYVTVISEDIKKFRTGLAWVCNYDWVPLPIIYPTIV 720
YFLPFNWAWALVYNARKEGLIEGDYYVTVISEDIKKFRTGLAWVCNYDWVPLPIIYPTIV
Sbjct: 181 YFLPFNWAWALVYNARKEGLIEGDYYVTVISEDIKKFRTGLAWVCNYDWVPLPIIYPTIV 240
Query: 721 CLAVHMYFFVGILARQYVKGSEIDPDMIDLVFPFMTSIQFVFYMGWLKVGEGLLNPWGED 900
CLAVHMYFFVGILARQYVKGSEIDPDMIDLVFPFMTSIQFVFYMGWLKVGEGLLNPWGED
Sbjct: 241 CLAVHMYFFVGILARQYVKGSEIDPDMIDLVFPFMTSIQFVFYMGWLKVGEGLLNPWGED 300
Query: 901 PDDFETNMLIDRNLAMGLKIVDEGYDKTPRLEKDAFWDDTWVPLYSEASAHEKRYHQRQG 1080
PDDFETNMLIDRNLAMGLKIVDEGYDKTPRLEKDAFWDDTWVPLYSEASAHEKRYHQRQG
Sbjct: 301 PDDFETNMLIDRNLAMGLKIVDEGYDKTPRLEKDAFWDDTWVPLYSEASAHEKRYHQRQG 360
Query: 1081 SLAHIKIGRSVSQVRMVPRDGRRASIVKERIVNVKPGSGIGDILRPSSLLNLMKHASSSR 1260
SLAHIKIGRSVSQVRMVPRDGRRASIVKERIVNVKPGSGIGDILRPSSLLNLMKHASSSR
Sbjct: 361 SLAHIKIGRSVSQVRMVPRDGRRASIVKERIVNVKPGSGIGDILRPSSLLNLMKHASSSR 420
Query: 1261 SLERQRSPGSFRMETLTPGSPTNTPIEP 1344
SLERQRSPGSFRMETLTPGSPTNTPIEP
Sbjct: 421 SLERQRSPGSFRMETLTPGSPTNTPIEP 448
>gi|39590605|emb|CAE64975.1| Hypothetical protein CBG09809
[Caenorhabditis briggsae]
Length = 461
Score = 857 bits (2213), Expect = 0.0
Identities = 414/454 (91%), Positives = 430/454 (94%), Gaps = 7/454 (1%)
Frame = +1
Query: 1 MTVSYNQSVATSRPWTFLALIFRWRGSVWSAIWIQYSVWLGLYFLVSAIYRFILSAYQQQ 180
MTVSYNQSVATSRPWTFLALIFRWRGSVW AIWIQYSVWLGLYFLVSAIYRFIL YQ+Q
Sbjct: 1 MTVSYNQSVATSRPWTFLALIFRWRGSVWKAIWIQYSVWLGLYFLVSAIYRFILQDYQRQ 60
Query: 181 IFVRLVDYVNSRMSYVPLDWMLGFFIAGVLRRFWYLYDIIGFIDNIACSTATYIRGDSER 360
IFV+LVDY +R+SYVPLDWMLGFFIAGVLRRFWYLYDIIGFIDNIACSTATYIRGDS+R
Sbjct: 61 IFVQLVDYTGARLSYVPLDWMLGFFIAGVLRRFWYLYDIIGFIDNIACSTATYIRGDSDR 120
Query: 361 AKQYRRNIIRYCELTQVLIFRDLSMKARKRFPTLDTVAAAGFMMPHEKANFDLIQYNYNK 540
AKQYRRNIIRYCELTQVLIFRDLSMKARKRFPTLDTVAAAGFMMPHEKANFD IQYNYNK
Sbjct: 121 AKQYRRNIIRYCELTQVLIFRDLSMKARKRFPTLDTVAAAGFMMPHEKANFDQIQYNYNK 180
Query: 541 YFLPFNWAWALVYNARKEGLIEGDYYVTVISEDIKKFRTGLAWVCNYDWVPLPIIYPTIV 720
YFLPFNWAWALVYNARKEGLIEGDYYVTVISEDIKKFRTGLAWVCNYDWVPLPIIYPTIV
Sbjct: 181 YFLPFNWAWALVYNARKEGLIEGDYYVTVISEDIKKFRTGLAWVCNYDWVPLPIIYPTIV 240
Query: 721 CLAVHMYFFVGILARQYVKGSEIDPDMIDLVFPFMTSIQFVFYMGWLKVGEGLLNPWGED 900
CLAVHMYFFV ++ARQYVKGSE DP+MIDLVFPFMTSIQFVFYMGWLKVGEGLLNPWGED
Sbjct: 241 CLAVHMYFFVCVMARQYVKGSENDPNMIDLVFPFMTSIQFVFYMGWLKVGEGLLNPWGED 300
Query: 901 PDDFETNMLIDRNLAMGLKIVDEGYDKTPRLEKDAFWDDTWVPLYSEASAHEKRYHQRQG 1080
DDFETNMLIDRNLAMGLKIVDEGYDKTPRLEKDAFWDDTWVPLYSEASAHEKRYHQRQG
Sbjct: 301 DDDFETNMLIDRNLAMGLKIVDEGYDKTPRLEKDAFWDDTWVPLYSEASAHEKRYHQRQG 360
Query: 1081 SLAHIKIGRSVSQVRMVPRDGRRASIVKERIVNVKP-------GSGIGDILRPSSLLNLM 1239
SLAHIK+ RSVSQVRMVPRDGRRAS+VKERIVNVKP G+GIGD+ RPSSLLNLM
Sbjct: 361 SLAHIKLSRSVSQVRMVPRDGRRASVVKERIVNVKPEETNESRGNGIGDVFRPSSLLNLM 420
Query: 1240 KHASSSRSLERQRSPGSFRMETLTPGSPTNTPIE 1341
KHA+SS SLERQ+SPGSFRM+TL+P SPT E
Sbjct: 421 KHAASSHSLERQQSPGSFRMDTLSPTSPTTNAKE 454
>gi|630651|pir||S42371 hypothetical protein T20G5.4 - Caenorhabditis
elegans
Length = 405
Score = 822 bits (2123), Expect = 0.0
Identities = 396/396 (100%), Positives = 396/396 (100%)
Frame = +1
Query: 1 MTVSYNQSVATSRPWTFLALIFRWRGSVWSAIWIQYSVWLGLYFLVSAIYRFILSAYQQQ 180
MTVSYNQSVATSRPWTFLALIFRWRGSVWSAIWIQYSVWLGLYFLVSAIYRFILSAYQQQ
Sbjct: 1 MTVSYNQSVATSRPWTFLALIFRWRGSVWSAIWIQYSVWLGLYFLVSAIYRFILSAYQQQ 60
Query: 181 IFVRLVDYVNSRMSYVPLDWMLGFFIAGVLRRFWYLYDIIGFIDNIACSTATYIRGDSER 360
IFVRLVDYVNSRMSYVPLDWMLGFFIAGVLRRFWYLYDIIGFIDNIACSTATYIRGDSER
Sbjct: 61 IFVRLVDYVNSRMSYVPLDWMLGFFIAGVLRRFWYLYDIIGFIDNIACSTATYIRGDSER 120
Query: 361 AKQYRRNIIRYCELTQVLIFRDLSMKARKRFPTLDTVAAAGFMMPHEKANFDLIQYNYNK 540
AKQYRRNIIRYCELTQVLIFRDLSMKARKRFPTLDTVAAAGFMMPHEKANFDLIQYNYNK
Sbjct: 121 AKQYRRNIIRYCELTQVLIFRDLSMKARKRFPTLDTVAAAGFMMPHEKANFDLIQYNYNK 180
Query: 541 YFLPFNWAWALVYNARKEGLIEGDYYVTVISEDIKKFRTGLAWVCNYDWVPLPIIYPTIV 720
YFLPFNWAWALVYNARKEGLIEGDYYVTVISEDIKKFRTGLAWVCNYDWVPLPIIYPTIV
Sbjct: 181 YFLPFNWAWALVYNARKEGLIEGDYYVTVISEDIKKFRTGLAWVCNYDWVPLPIIYPTIV 240
Query: 721 CLAVHMYFFVGILARQYVKGSEIDPDMIDLVFPFMTSIQFVFYMGWLKVGEGLLNPWGED 900
CLAVHMYFFVGILARQYVKGSEIDPDMIDLVFPFMTSIQFVFYMGWLKVGEGLLNPWGED
Sbjct: 241 CLAVHMYFFVGILARQYVKGSEIDPDMIDLVFPFMTSIQFVFYMGWLKVGEGLLNPWGED 300
Query: 901 PDDFETNMLIDRNLAMGLKIVDEGYDKTPRLEKDAFWDDTWVPLYSEASAHEKRYHQRQG 1080
PDDFETNMLIDRNLAMGLKIVDEGYDKTPRLEKDAFWDDTWVPLYSEASAHEKRYHQRQG
Sbjct: 301 PDDFETNMLIDRNLAMGLKIVDEGYDKTPRLEKDAFWDDTWVPLYSEASAHEKRYHQRQG 360
Query: 1081 SLAHIKIGRSVSQVRMVPRDGRRASIVKERIVNVKP 1188
SLAHIKIGRSVSQVRMVPRDGRRASIVKERIVNVKP
Sbjct: 361 SLAHIKIGRSVSQVRMVPRDGRRASIVKERIVNVKP 396