Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= T23F11_3
         (762 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17555236|ref|NP_497950.1| putative protein family member (3F7...   474   e-132
gi|17554516|ref|NP_497889.1| putative protein family member (28....   457   e-127
gi|17553072|ref|NP_497971.1| putative protein family member, wit...   452   e-126
gi|33589131|emb|CAE45044.1| Hypothetical protein F17C8.7 [Caenor...   452   e-126
gi|17554552|ref|NP_497798.1| putative protein (28.6 kD) (3F52) [...   356   3e-97
gi|39583315|emb|CAE60107.1| Hypothetical protein CBG03643 [Caeno...   349   4e-95
gi|630734|pir||S43597 coiled-coil protein homolog R07E5.6 - Caen...   332   4e-90
gi|8923251|ref|NP_060208.1| chromosome 9 open reading frame 39 [...    34   2.9
gi|10432807|dbj|BAB13850.1| unnamed protein product [Homo sapiens]     34   2.9
gi|17538264|ref|NP_500821.1| putative protein (4G259) [Caenorhab...    33   8.5


>gi|17555236|ref|NP_497950.1| putative protein family member (3F744)
           [Caenorhabditis elegans]
 gi|7508307|pir||T25177 hypothetical protein T23F11.2 -
           Caenorhabditis elegans
 gi|3880104|emb|CAA86457.1| Hypothetical protein T23F11.2
           [Caenorhabditis elegans]
          Length = 253

 Score =  474 bits (1219), Expect = e-132
 Identities = 235/253 (92%), Positives = 235/253 (92%)
 Frame = -1

Query: 762 MPCQKKSNPTELHISTGREIVQRNFVFRNTTGKDFLLKLHATNEAVTFPTEVFRFPPLAH 583
           MPCQKKSNPTELHISTGREIVQRNFVFRNTTGKDFLLKLHATNEAVTFPTEVFRFPPLAH
Sbjct: 1   MPCQKKSNPTELHISTGREIVQRNFVFRNTTGKDFLLKLHATNEAVTFPTEVFRFPPLAH 60

Query: 582 RAIQFRVNSSKLSQWDKMNLLIKGYVLPIYAKSLKQFIDQKKTAGTKEQEAFSLSVKFTD 403
           RAIQFRVNSSKLSQWDKMNLLIKGYVLPIYAKSLKQFIDQKKTAGTKEQEAFSLSVKFTD
Sbjct: 61  RAIQFRVNSSKLSQWDKMNLLIKGYVLPIYAKSLKQFIDQKKTAGTKEQEAFSLSVKFTD 120

Query: 402 QFSAPQTVINLPGYATCIESTDYPVDVEELDTTTAVNIERDVSTAVPIGSMMGFVEEYKR 223
           QFSAPQTVINLPGYATCIESTDYPVDVEELDTTTAVNIERDVSTAVPIGSMMGFVEEYKR
Sbjct: 121 QFSAPQTVINLPGYATCIESTDYPVDVEELDTTTAVNIERDVSTAVPIGSMMGFVEEYKR 180

Query: 222 RQLNKGCWFSNYICGTEKQPEKQXXXXXXXXXXXXXXXXXXSKACRIQANKKNKSDVNVC 43
           RQLNKGCWFSNYICGTEKQPEKQ                  SKACRIQANKKNKSDVNVC
Sbjct: 181 RQLNKGCWFSNYICGTEKQPEKQSMRSSRRSSRSSNHSAKSSKACRIQANKKNKSDVNVC 240

Query: 42  LEATPCGGSTIQA 4
           LEATPCGGSTIQA
Sbjct: 241 LEATPCGGSTIQA 253




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