Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= W01D2_4
         (279 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17536655|ref|NP_497072.1| GLP 680 33251 33520 like (10.5 kD) ...   175   2e-43
gi|39583062|emb|CAE60602.1| Hypothetical protein CBG04239 [Caeno...   172   2e-42
gi|17554756|ref|NP_497727.1| ribosomal Protein, Large subunit (1...   166   1e-40
gi|24642107|ref|NP_573005.1| CG9091-PA [Drosophila melanogaster]...   117   8e-26
gi|38047707|gb|AAR09756.1| similar to Drosophila melanogaster CG...   117   8e-26
gi|37779096|gb|AAP20208.1| ribosomal protein L37 [Pagrus major]       116   1e-25
gi|19852052|gb|AAL99981.1| 60S ribosomal protein L37 [Aplysia ca...   115   3e-25
gi|15218208|ref|NP_175640.1| 60S ribosomal protein L37 (RPL37B) ...   114   5e-25
gi|50761594|ref|XP_424773.1| PREDICTED: similar to ribosomal pro...   114   7e-25
gi|15214258|sp|Q9C0T1|RL37_EMENI 60S ribosomal protein L37 >gnl|...   112   2e-24
gi|18401007|ref|NP_566535.1| 60S ribosomal protein L37 (RPL37C) ...   112   2e-24
gi|50344792|ref|NP_001002069.1| zgc:86733 [Danio rerio] >gnl|BL_...   111   3e-24
gi|21071034|gb|AAB47039.2| ribosomal protein L37 [Homo sapiens]       111   3e-24
gi|47210130|emb|CAF95579.1| unnamed protein product [Tetraodon n...   111   3e-24
gi|4506641|ref|NP_000988.1| ribosomal protein L37; 60S ribosomal...   111   4e-24
gi|50285187|ref|XP_445022.1| unnamed protein product [Candida gl...   110   7e-24
gi|6323214|ref|NP_013286.1| Protein component of the large (60S)...   109   1e-23
gi|19075850|ref|NP_588350.1| 60s ribosomal protein L37 [Schizosa...   108   2e-23
gi|12842823|dbj|BAB25746.1| unnamed protein product [Mus musculus]    108   2e-23
gi|49258864|pdb|1S1I|Y Chain Y, Structure Of The Ribosomal 80s-E...   108   3e-23
gi|31088846|sp|P59289|R37A_SCHPO 60S ribosomal protein L37-A (L3...   108   3e-23
gi|50258937|gb|EAL21618.1| hypothetical protein CNBC6540 [Crypto...   108   4e-23
gi|49256539|gb|AAH73638.1| Unknown (protein for MGC:82973) [Xeno...   108   4e-23
gi|27948818|gb|AAO25606.1| ribosomal protein L37A [Kluyveromyces...   107   5e-23
gi|2829674|sp|P79244|RL37_BOVIN 60S RIBOSOMAL PROTEIN L37 >gnl|B...   107   5e-23
gi|45934571|gb|AAS79345.1| 60S ribosomal protein L37 [Aedes aegy...   107   6e-23
gi|20139580|sp|Q962S7|RL37_SPOFR 60S ribosomal protein L37 >gnl|...   107   8e-23
gi|49532862|dbj|BAD26666.1| Ribosomal protein L37 [Plutella xylo...   107   8e-23
gi|15218094|ref|NP_172977.1| 60S ribosomal protein L37 (RPL37A) ...   105   2e-22
gi|50551883|ref|XP_503416.1| hypothetical protein [Yarrowia lipo...   105   2e-22
gi|6094071|sp|O44125|RL37_SCHMA 60S RIBOSOMAL PROTEIN L37 >gnl|B...   105   2e-22
gi|23490537|gb|EAA22289.1| Ribosomal protein L37e, putative [Pla...   105   2e-22
gi|50304647|ref|XP_452279.1| unnamed protein product [Kluyveromy...   103   7e-22
gi|6320708|ref|NP_010788.1| Protein component of the large (60S)...   103   7e-22
gi|46227990|gb|EAK88910.1| 60S ribosomal protein L37 [Cryptospor...   103   9e-22
gi|24659091|ref|NP_611757.1| CG9873-PA [Drosophila melanogaster]...   102   2e-21
gi|44662866|gb|AAS47512.1| ribosomal protein L37 [Glycine max]        101   3e-21
gi|45199207|ref|NP_986236.1| AFR688Cp [Eremothecium gossypii] >g...   101   3e-21
gi|41052935|dbj|BAD07846.1| putative 60S ribosomal protein L37 [...   101   5e-21
gi|50422675|ref|XP_459914.1| unnamed protein product [Debaryomyc...   101   5e-21
gi|34878567|ref|XP_212752.2| similar to ribosomal protein L37 [R...   100   6e-21
gi|47847878|dbj|BAD21671.1| putative ribosomal protein L37 [Oryz...   100   8e-21
gi|32417356|ref|XP_329156.1| hypothetical protein [Neurospora cr...    97   9e-20
gi|20139809|sp|Q9P836|RL37_CANAL 60S ribosomal protein L37 >gnl|...    96   2e-19
gi|45709618|gb|AAH67790.1| Unknown (protein for IMAGE:5310673) [...    95   3e-19
gi|29735832|ref|XP_294473.1| similar to ribosomal protein L37 [H...    92   3e-18
gi|14754627|ref|XP_030893.1| similar to ribosomal protein L37 [H...    92   4e-18
gi|29249003|gb|EAA40524.1| GLP_680_33251_33520 [Giardia lamblia ...    91   5e-18
gi|27680290|ref|XP_223076.1| similar to ribosomal protein L37 [R...    91   6e-18
gi|2275274|gb|AAB63862.1| 60S ribosomal protein homolog [Schizos...    91   8e-18
gi|730561|sp|P39094|RL37_LEIIN 60S RIBOSOMAL PROTEIN L37 >gnl|BL...    88   5e-17
gi|49094926|ref|XP_408924.1| RL37_EMENI 60S ribosomal protein L3...    85   3e-16
gi|38084918|ref|XP_357054.1| similar to ribosomal protein L37 [M...    83   2e-15
gi|38567088|emb|CAE76385.1| probable ribosomal protein L37.e.A, ...    80   8e-15
gi|20984795|ref|XP_141962.1| similar to ribosomal protein L37 [M...    79   2e-14
gi|49077078|ref|XP_402444.1| hypothetical protein UM04829.1 [Ust...    77   1e-13
gi|34861826|ref|XP_219512.2| similar to ribosomal protein L37 [R...    75   3e-13
gi|46128585|ref|XP_388846.1| hypothetical protein FG08670.1 [Gib...    72   4e-12
gi|15668269|ref|NP_247062.1| LSU ribosomal protein L37E [Methano...    66   2e-10
gi|19074568|ref|NP_586074.1| 60S RIBOSOMAL PROTEIN L37 [Encephal...    63   2e-09
gi|34866580|ref|XP_345843.1| similar to ribosomal protein L37 [R...    63   2e-09
gi|15678675|ref|NP_275790.1| ribosomal protein L37 [Methanotherm...    62   3e-09
gi|20455457|sp|P32410|RL37_HALMA 50S ribosomal protein L37e (L35...    61   5e-09
gi|421711|pir||S33789 ribosomal protein L37.eR [validated] - Hal...    61   5e-09
gi|15790490|ref|NP_280314.1| 50S ribosomal protein L37E; Rpl37e ...    61   7e-09
gi|20092010|ref|NP_618085.1| ribosomal protein L37 [Methanosarci...    60   9e-09
gi|38100215|gb|EAA47377.1| hypothetical protein MG02620.4 [Magna...    58   6e-08
gi|20093661|ref|NP_613508.1| Ribosomal protein L37E [Methanopyru...    58   6e-08
gi|21226442|ref|NP_632364.1| LSU ribosomal protein L37E [Methano...    58   6e-08
gi|15920546|ref|NP_376215.1| 61aa long hypothetical 50S ribosoma...    57   1e-07
gi|1350736|sp|P49212|RL37_LYCES 60S RIBOSOMAL PROTEIN L37 >gnl|B...    56   2e-07
gi|11498480|ref|NP_069708.1| LSU ribosomal protein L37E (rpl37E)...    55   4e-07
gi|13541186|ref|NP_110874.1| 50S ribosomal protein L37E [Thermop...    54   1e-06
gi|16082246|ref|NP_394697.1| probable ribosomal protein L37 [The...    53   1e-06
gi|45358710|ref|NP_988267.1| Ribosomal protein L37e [Methanococc...    53   1e-06
gi|15897657|ref|NP_342262.1| LSU ribosomal protein L37E (rpl37E)...    53   2e-06
gi|22001910|sp|Q8U0P5|RL37_PYRFU 50S ribosomal protein L37e >gnl...    50   2e-05
gi|14600780|ref|NP_147301.1| 50S ribosomal protein L37 [Aeropyru...    50   2e-05
gi|33359566|ref|NP_579270.2| LSU ribosomal protein L37E [Pyrococ...    50   2e-05
gi|14520858|ref|NP_126333.1| LSU ribosomal protein L37E [Pyrococ...    50   2e-05
gi|82824|pir||S10052 ribosomal protein L37.e - fission yeast (Sc...    40   0.009
gi|42794069|dbj|BAD08868.2| unknown protein [Oryza sativa (japon...    36   0.23
gi|11498713|ref|NP_069942.1| SSU ribosomal protein S27AE (rps27A...    35   0.40
gi|16082116|ref|NP_394552.1| probable 30S ribosomal protein S27A...    34   0.68
gi|42521656|ref|NP_967036.1| hypothetical protein predicted by G...    34   0.89
gi|13541313|ref|NP_111001.1| 30S ribosomal protein S27AE [Thermo...    34   0.89
gi|12311798|emb|CAC22616.1| hypothetical protein L4830.12 [Leish...    33   2.0
gi|34935328|ref|XP_234368.2| similar to metalloprotease-disinteg...    32   3.4
gi|46110385|ref|XP_382250.1| predicted protein [Gibberella zeae ...    32   4.4
gi|10954862|ref|NP_053282.1| Hypothetical gene [Agrobacterium tu...    31   5.8
gi|37532978|ref|NP_920791.1| hypothetical protein similar to put...    31   5.8
gi|137017|sp|P16836|ULC6_HCMVA HYPOTHETICAL PROTEIN UL126 >gnl|B...    31   5.8
gi|24647776|ref|NP_650654.1| CG14318-PA [Drosophila melanogaster...    30   9.8
gi|15668569|ref|NP_247367.1| SSU ribosomal protein S27AE [Methan...    30   9.8


>gi|17536655|ref|NP_497072.1| GLP 680 33251 33520 like (10.5 kD)
           (2P101) [Caenorhabditis elegans]
 gi|7508771|pir||T26055 ribosomal protein L37 W01D2.1 [similarity] -
           Caenorhabditis elegans
 gi|3880418|emb|CAB05635.1| Hypothetical protein W01D2.1
           [Caenorhabditis elegans]
          Length = 92

 Score =  175 bits (444), Expect = 2e-43
 Identities = 81/92 (88%), Positives = 81/92 (88%)
 Frame = +1

Query: 1   MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIXXXXXX 180
           MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSI
Sbjct: 1   MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTG 60

Query: 181 XXXXXHLRDVNARFRNGFREGTTPKPRAQPTN 276
                HLRDVNARFRNGFREGTTPKPRAQPTN
Sbjct: 61  TGRTRHLRDVNARFRNGFREGTTPKPRAQPTN 92




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