Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= W04D2_7
         (1875 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17565040|ref|NP_506132.1| C2H2 type zinc finger containing pr...  1103   0.0
gi|39592279|emb|CAE75500.1| Hypothetical protein CBG23509 [Caeno...   625   e-177
gi|17537255|ref|NP_496852.1| putative nuclear protein family mem...    49   5e-04
gi|39591275|emb|CAE73328.1| Hypothetical protein CBG20757 [Caeno...    48   0.001
gi|39585096|emb|CAE62747.1| Hypothetical protein CBG06911 [Caeno...    45   0.008
gi|17541750|ref|NP_499886.1| C2H2 type zinc finger containing pr...    40   0.19
gi|29570386|gb|AAK18978.2| Hypothetical protein T20F7.1 [Caenorh...    40   0.25
gi|17569883|ref|NP_510726.1| C2H2 type zinc finger containing pr...    40   0.25
gi|15893320|ref|NP_346669.1| Aspartate-semialdehyde dehydrogenas...    39   0.56
gi|17553998|ref|NP_498941.1| putative protein, with a coiled coi...    38   0.74
gi|46137291|ref|XP_390337.1| hypothetical protein FG10161.1 [Gib...    37   1.3
gi|45190433|ref|NP_984687.1| AEL174Wp [Eremothecium gossypii] >g...    37   1.6
gi|48835140|ref|ZP_00292141.1| COG0587: DNA polymerase III, alph...    37   1.6
gi|19115021|ref|NP_594109.1| hypothetical zinc-finger protein; p...    37   2.1
gi|28192601|gb|AAO06916.1| GdmAI [Streptomyces hygroscopicus]          35   4.8
gi|17534253|ref|NP_494132.1| mutator-like transposase family mem...    35   4.8
gi|28829684|gb|AAO52200.1| similar to Dictyostelium discoideum (...    35   6.2


>gi|17565040|ref|NP_506132.1| C2H2 type zinc finger containing protein
            (72.0 kD) (5M976) [Caenorhabditis elegans]
 gi|7508960|pir||T26148 hypothetical protein W04D2.4 - Caenorhabditis
            elegans
 gi|3880463|emb|CAA99942.1| Hypothetical protein W04D2.4
            [Caenorhabditis elegans]
          Length = 624

 Score = 1103 bits (2852), Expect = 0.0
 Identities = 548/609 (89%), Positives = 548/609 (89%)
 Frame = -1

Query: 1830 VEAYMELKPQQPRYICPYGCNKLIASRTIDYHKNNGCGRNQSDNMVSHPQLKKRFYCCGL 1651
            VEAYMELKPQQPRYICPYGCNKLIASRTIDYHKNNGCGRNQSDNMVSHPQLKKRFYCCGL
Sbjct: 16   VEAYMELKPQQPRYICPYGCNKLIASRTIDYHKNNGCGRNQSDNMVSHPQLKKRFYCCGL 75

Query: 1650 CSSEFITRPEFHSHLRIEHDVLPDVHSMEFPDRATFERFRFWLESEGGAHFRHXXXXXXX 1471
            CSSEFITRPEFHSHLRIEHDVLPDVHSMEFPDRATFERFRFWLESEGGAHFRH
Sbjct: 76   CSSEFITRPEFHSHLRIEHDVLPDVHSMEFPDRATFERFRFWLESEGGAHFRHKSGSKRR 135

Query: 1470 XXXXGIFLACNRSGNVSSDKNTANDRTGPFRLGFTCTAFIHATEHNDGHVSAEFCGDHYA 1291
                GIFLACNRSGNVSSDKNTANDRTGPFRLGFTCTAFIHATEHNDGHVSAEFCGDHYA
Sbjct: 136  GRGKGIFLACNRSGNVSSDKNTANDRTGPFRLGFTCTAFIHATEHNDGHVSAEFCGDHYA 195

Query: 1290 HDARMRLPNVIKYIIAQKQMEQSSPMEIIGFLRHHFLSISADNIYAQRVCFVDTDELKTL 1111
            HDARMRLPNVIKYIIAQKQMEQSSPMEIIGFLRHHFLSISADNIYAQRVCFVDTDELKTL
Sbjct: 196  HDARMRLPNVIKYIIAQKQMEQSSPMEIIGFLRHHFLSISADNIYAQRVCFVDTDELKTL 255

Query: 1110 LVSCTKKWSREGIPKSIEVWEEELIDKVGIEWPPVSMRSPHRFTEPRKPTTTEIAIQEHW 931
            LVSCTKKWSREGIPKSIEVWEEELIDKVGIEWPPVSMRSPHRFTEPRKPTTTEIAIQEHW
Sbjct: 256  LVSCTKKWSREGIPKSIEVWEEELIDKVGIEWPPVSMRSPHRFTEPRKPTTTEIAIQEHW 315

Query: 930  PRPRVFVGKNRRDHLMAFPLGDVSQSSSGYEQHEDMDDPRFIQIEMEYEDERFVQDAQMX 751
            PRPRVFVGKNRRDHLMAFPLGDVSQSSSGYEQHEDMDDPRFIQIEMEYEDERFVQDAQM
Sbjct: 316  PRPRVFVGKNRRDHLMAFPLGDVSQSSSGYEQHEDMDDPRFIQIEMEYEDERFVQDAQMV 375

Query: 750  XXXXXXXXETQTYERHQEAIRKGNEILEHGGEEVRVGNEVIVAPRSSNDQIANEQKTSTD 571
                    ETQTYERHQEAIRKGNEILEHGGEEVRVGNEVIVAPRSSNDQIANEQKTSTD
Sbjct: 376  EEEEIEVVETQTYERHQEAIRKGNEILEHGGEEVRVGNEVIVAPRSSNDQIANEQKTSTD 435

Query: 570  ERILIESPGHXXXXXXXXXXXXXXXDSXXXXXXXXXXXXXXXLSTRHQLEDSDQSGPSNA 391
            ERILIESPGH               DS               LSTRHQLEDSDQSGPSNA
Sbjct: 436  ERILIESPGHEEVVIVDGDVDDEIDDSLQLHHHRHLQNDHHHLSTRHQLEDSDQSGPSNA 495

Query: 390  VDRFLDTHKVDXXXXXXXEVEAFKHTVLKRADQISPANMKSLLIRFQTLHHSVMEKDPGM 211
            VDRFLDTHKVD       EVEAFKHTVLKRADQISPANMKSLLIRFQTLHHSVMEKDPGM
Sbjct: 496  VDRFLDTHKVDNLNLLLEEVEAFKHTVLKRADQISPANMKSLLIRFQTLHHSVMEKDPGM 555

Query: 210  PXXXXSTVFPTRSKYQYRPGKGLERAEQDYLSRGNGDITLQPIEDELSDDEDLMIANSEH 31
            P    STVFPTRSKYQYRPGKGLERAEQDYLSRGNGDITLQPIEDELSDDEDLMIANSEH
Sbjct: 556  PSSSSSTVFPTRSKYQYRPGKGLERAEQDYLSRGNGDITLQPIEDELSDDEDLMIANSEH 615

Query: 30   MSFNTGIWS 4
            MSFNTGIWS
Sbjct: 616  MSFNTGIWS 624




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