Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= W05F2_4
         (669 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17509603|ref|NP_491150.1| putative membrane protein, with a c...   425   e-118
gi|39598287|emb|CAE68979.1| Hypothetical protein CBG14962 [Caeno...   253   2e-66
gi|48109148|ref|XP_396216.1| similar to ENSANGP00000007871 [Apis...    39   0.093
gi|2136504|pir||I47141 gastric mucin (clone PGM-2A) - pig (fragm...    38   0.16
gi|13365610|dbj|BAB39155.1| SCARECROW [Pisum sativum]                  38   0.21
gi|563375|emb|CAA84031.1| mucin [Homo sapiens]                         37   0.35
gi|28830022|gb|AAO52512.1| similar to Streptococcus pneumoniae. ...    37   0.35
gi|23612741|ref|NP_704280.1| hypothetical protein [Plasmodium fa...    28   0.72
gi|11990203|emb|CAC19572.1| MUC3B mucin [Homo sapiens]                 36   0.79
gi|19113482|ref|NP_596690.1| hypothetical serine-rich secreted p...    36   0.79
gi|21751542|dbj|BAC03989.1| unnamed protein product [Homo sapiens]     35   1.0
gi|37533816|ref|NP_921210.1| putative polyprotein [Oryza sativa ...    31   1.0
gi|1374754|gb|AAC44118.1| tetrabrachion                                35   1.3
gi|1589636|prf||2211379A tetrabrachion                                 35   1.3
gi|7521722|pir||S68553 surface layer protein tetrabrachion precu...    35   1.3
gi|46433992|gb|EAK93415.1| hypothetical protein CaO19.207 [Candi...    35   1.8
gi|38111391|gb|EAA56979.1| hypothetical protein MG07334.4 [Magna...    35   1.8
gi|46445432|gb|EAL04701.1| hypothetical protein CaO19.12372 [Can...    34   2.3
gi|50293877|ref|XP_449350.1| unnamed protein product [Candida gl...    34   2.3
gi|11362263|pir||T46740 microfilarial sheath protein SHP3 [impor...    34   2.3
gi|28378059|ref|NP_784951.1| cell surface SD repeat protein prec...    34   3.0
gi|4504733|ref|NP_003595.1| insulin receptor substrate 4 [Homo s...    34   3.0
gi|38076580|ref|XP_203999.3| PDZ domain containing guanine nucle...    33   3.9
gi|27376446|ref|NP_767975.1| bll1335 [Bradyrhizobium japonicum U...    33   3.9
gi|24286652|gb|AAN46876.1| nucleotide exchange factor RasGEF G [...    33   5.1
gi|50414757|gb|AAH77771.1| Unknown (protein for IMAGE:4885186) [...    33   5.1
gi|50411631|ref|XP_457064.1| unnamed protein product [Debaryomyc...    33   5.1
gi|27374359|gb|AAO01099.1| CG10967-PA [Drosophila virilis]             33   5.1
gi|50303421|ref|XP_451652.1| unnamed protein product [Kluyveromy...    33   5.1
gi|50547897|ref|XP_501418.1| hypothetical protein [Yarrowia lipo...    33   5.1
gi|13592175|gb|AAK31375.1| ppg3 [Leishmania major]                     33   6.7
gi|9454401|gb|AAF87790.1| K1 glycoprotein [Human herpesvirus 8]        33   6.7
gi|46440703|gb|EAL00006.1| hypothetical protein CaO19.13471 [Can...    33   6.7
gi|50542920|ref|XP_499626.1| hypothetical protein [Yarrowia lipo...    33   6.7
gi|28899226|ref|NP_798831.1| polyribonucleotide nucleotidyltrans...    33   6.7
gi|11499419|ref|NP_070658.1| F420H2:quinone oxidoreductase, 41.2...    33   6.7
gi|6323336|ref|NP_013408.1| functions in the PKC1 protein kinase...    33   6.7
gi|33946327|ref|NP_005076.3| nucleoporin 214kDa; nuclear pore co...    32   8.7
gi|41016075|dbj|BAD07398.1| KIAA0023 splice variant 1 [Homo sapi...    32   8.7
gi|49077136|ref|XP_402467.1| hypothetical protein UM04852.1 [Ust...    32   8.7
gi|21539661|ref|NP_660094.1| suppressor of Ty 6 homolog; pandora...    32   8.7
gi|38648673|gb|AAH63248.1| Suppressor of Ty 6 homolog [Danio rerio]    32   8.7


>gi|17509603|ref|NP_491150.1| putative membrane protein, with a
           coiled coil domain (24.7 kD) (1D936) [Caenorhabditis
           elegans]
 gi|7509013|pir||T33821 hypothetical protein W05F2.3 -
           Caenorhabditis elegans
 gi|3886068|gb|AAC78214.1| Hypothetical protein W05F2.3
           [Caenorhabditis elegans]
          Length = 222

 Score =  425 bits (1093), Expect = e-118
 Identities = 215/222 (96%), Positives = 215/222 (96%)
 Frame = -1

Query: 669 MRSLTLAVLTITACAAASTAKSVHHEPHRLDDKDSVEQVISEALKDIDASKKMIRMTVTM 490
           MRSLTLAVLTITACAAASTAKSVHHEPHRLDDKDSVEQVISEALKDIDASKKMIRMTVTM
Sbjct: 1   MRSLTLAVLTITACAAASTAKSVHHEPHRLDDKDSVEQVISEALKDIDASKKMIRMTVTM 60

Query: 489 NDTADDSASNFFRDFEDTFSGMFNAIQNTHVPFFXXXXXXXSPVAPKTNQTTEDLLTRTR 310
           NDTADDSASNFFRDFEDTFSGMFNAIQNTHVPFF       SPVAPKTNQTTEDLLTRTR
Sbjct: 61  NDTADDSASNFFRDFEDTFSGMFNAIQNTHVPFFSSSESSLSPVAPKTNQTTEDLLTRTR 120

Query: 309 NELQADIDSLRGHIVYLQADVRDWILSNENSQFKSVLLGAMSAIVVLIAYTVICKCCRRR 130
           NELQADIDSLRGHIVYLQADVRDWILSNENSQFKSVLLGAMSAIVVLIAYTVICKCCRRR
Sbjct: 121 NELQADIDSLRGHIVYLQADVRDWILSNENSQFKSVLLGAMSAIVVLIAYTVICKCCRRR 180

Query: 129 SRLNHLAAFVNDGCSAQDSESLLPTKNTKRPRNYPSNSDEDI 4
           SRLNHLAAFVNDGCSAQDSESLLPTKNTKRPRNYPSNSDEDI
Sbjct: 181 SRLNHLAAFVNDGCSAQDSESLLPTKNTKRPRNYPSNSDEDI 222




[DB home][top]