Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= W06D4_6
         (1579 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17508659|ref|NP_492438.1| RADiation sensitivity abnormal/yeas...  1031   0.0
gi|7509076|pir||T26238 hypothetical protein W06D4.6 - Caenorhabd...  1031   0.0
gi|39589798|emb|CAE67033.1| Hypothetical protein CBG12435 [Caeno...   895   0.0
gi|47575794|ref|NP_001001241.1| hypothetical protein MGC69368 [X...   478   e-133
gi|1905887|gb|AAB54115.1| putative recombination factor GdRad54 ...   468   e-130
gi|26326753|dbj|BAC27120.1| unnamed protein product [Mus musculus]    464   e-129
gi|1495708|emb|CAA66380.1| RAD54 [Mus musculus]                       462   e-129
gi|26353994|dbj|BAC40627.1| unnamed protein product [Mus musculus]    462   e-128
gi|31982068|ref|NP_033041.2| RAD54 like [Mus musculus] >gnl|BL_O...   462   e-128
gi|34870243|ref|XP_216497.2| similar to RAD54 [Rattus norvegicus]     461   e-128
gi|41055574|ref|NP_957438.1| similar to RAD54-like [Danio rerio]...   461   e-128
gi|47777671|gb|AAT38113.1| RAD54-like (S. cerevisiae) [Homo sapi...   454   e-126
gi|4506397|ref|NP_003570.1| RAD54-like protein; RAD54 homolog; R...   454   e-126
gi|17136368|ref|NP_476661.1| CG3736-PA [Drosophila melanogaster]...   420   e-116
gi|1765914|emb|CAA71278.1| RAD54 [Drosophila melanogaster]            420   e-116
gi|27819922|gb|AAL39744.2| LD35220p [Drosophila melanogaster]         420   e-116
gi|50751542|ref|XP_422446.1| PREDICTED: similar to putative reco...   417   e-115
gi|47211681|emb|CAF92845.1| unnamed protein product [Tetraodon n...   414   e-114
gi|48104593|ref|XP_392959.1| similar to RAD54-like protein; RAD5...   400   e-110
gi|3329473|gb|AAC26857.1| RAD54 DNA repair protein [Drosophila m...   375   e-102
gi|46127169|ref|XP_388138.1| hypothetical protein FG07962.1 [Gib...   339   1e-91
gi|49070818|ref|XP_399698.1| hypothetical protein UM02083.1 [Ust...   337   6e-91
gi|19115202|ref|NP_594290.1| DNA repair protein rhp54 [Schizosac...   335   1e-90
gi|542215|pir||S41886 DNA repair protein - fission yeast (Schizo...   335   2e-90
gi|22775414|dbj|BAC11858.1| recombinational repair protein [Magn...   333   5e-90
gi|38105538|gb|EAA51954.1| hypothetical protein MG03549.4 [Magna...   333   5e-90
gi|46444164|gb|EAL03441.1| hypothetical protein CaO19.5004 [Cand...   332   2e-89
gi|50546160|ref|XP_500607.1| hypothetical protein [Yarrowia lipo...   330   8e-89
gi|32421361|ref|XP_331124.1| hypothetical protein ( (AB032901) R...   330   8e-89
gi|27803083|emb|CAD60786.1| unnamed protein product [Podospora a...   328   3e-88
gi|49096408|ref|XP_409664.1| hypothetical protein AN5527.2 [Aspe...   327   5e-88
gi|50258606|gb|EAL21293.1| hypothetical protein CNBD3470 [Crypto...   325   2e-87
gi|50420343|ref|XP_458705.1| unnamed protein product [Debaryomyc...   325   2e-87
gi|7384851|dbj|BAA93079.1| Rad54 homolog [Neurospora crassa]          324   4e-87
gi|6321275|ref|NP_011352.1| DNA-dependent ATPase, stimulates str...   318   2e-85
gi|22331177|ref|NP_188552.2| DNA repair protein RAD54, putative ...   313   6e-84
gi|9294624|dbj|BAB02963.1| DNA repair protein RAD54-like [Arabid...   312   1e-83
gi|46805904|dbj|BAD17217.1| putative DNA repair protein rhp54 [O...   302   1e-80
gi|50290001|ref|XP_447432.1| unnamed protein product [Candida gl...   290   5e-77
gi|50302399|ref|XP_451134.1| unnamed protein product [Kluyveromy...   287   4e-76
gi|45190309|ref|NP_984563.1| AEL297Wp [Eremothecium gossypii] >g...   284   5e-75
gi|46227534|gb|EAK88469.1| RAD54 like SWI/SNF2 ATpase [Cryptospo...   277   4e-73
gi|47939775|gb|AAH72215.1| MGC81308 protein [Xenopus laevis]          276   1e-72
gi|49085796|ref|XP_404992.1| hypothetical protein AN0855.2 [Aspe...   275   3e-72
gi|34867177|ref|XP_232785.2| similar to RAD54B homolog isoform 1...   272   2e-71
gi|45382655|ref|NP_990041.1| RAD54B protein [Gallus gallus] >gnl...   268   2e-70
gi|47225441|emb|CAG11924.1| unnamed protein product [Tetraodon n...   265   2e-69
gi|23482686|gb|EAA18598.1| DNA repair protein RAD54-like-related...   265   3e-69
gi|23612971|ref|NP_704510.1| DNA repair protein rad54, putative ...   263   7e-69
gi|6912622|ref|NP_036547.1| RAD54 homolog B isoform 1; RAD54, S....   261   3e-68
gi|34785459|gb|AAH57604.1| Unknown (protein for MGC:67261) [Mus ...   261   4e-68
gi|50424107|ref|XP_460638.1| unnamed protein product [Debaryomyc...   257   6e-67
gi|31199727|ref|XP_308811.1| ENSANGP00000007696 [Anopheles gambi...   247   5e-64
gi|50259517|gb|EAL22190.1| hypothetical protein CNBC3280 [Crypto...   244   4e-63
gi|50553882|ref|XP_504352.1| hypothetical protein [Yarrowia lipo...   236   9e-61
gi|586510|sp|P38086|YBS3_YEAST Hypothetical 108.0 kDa helicase i...   234   4e-60
gi|37362617|ref|NP_009629.2| genetic interaction with DMC1; Rdh5...   234   4e-60
gi|49074294|ref|XP_401291.1| hypothetical protein UM03676.1 [Ust...   227   5e-58
gi|50311185|ref|XP_455616.1| unnamed protein product [Kluyveromy...   223   1e-56
gi|46438788|gb|EAK98114.1| hypothetical protein CaO19.12827 [Can...   223   1e-56
gi|50294037|ref|XP_449430.1| unnamed protein product [Candida gl...   222   2e-56
gi|45200885|ref|NP_986455.1| AGL212Wp [Eremothecium gossypii] >g...   221   4e-56
gi|38258935|sp|Q09772|RD54_SCHPO Meiotic recombination protein r...   214   4e-54
gi|19113950|ref|NP_593038.1| hypothetical helicase; putative dna...   214   4e-54
gi|2130312|pir||S62418 hypothetical protein SPAC22F3.03c - fissi...   208   3e-52
gi|11360069|pir||T43485 hypothetical protein DKFZp434J1672.1 - h...   205   2e-51
gi|47225443|emb|CAG11926.1| unnamed protein product [Tetraodon n...   184   7e-45
gi|31202135|ref|XP_310015.1| ENSANGP00000015114 [Anopheles gambi...   183   9e-45
gi|47222924|emb|CAF99080.1| unnamed protein product [Tetraodon n...   170   1e-40
gi|6678609|ref|NP_033556.1| alpha thalassemia/mental retardation...   169   2e-40
gi|30089126|emb|CAD35753.1| X-linked nuclear protein [Dugesia ja...   169   2e-40
gi|34556097|emb|CAB55149.2| Hypothetical protein Y116A8C.13 [Cae...   168   4e-40
gi|11877270|emb|CAC18960.1| dJ875J14.1 (alpha thalassemia/mental...   167   8e-40
gi|47222591|emb|CAG02956.1| unnamed protein product [Tetraodon n...   167   8e-40
gi|1778352|gb|AAB40699.1| putative DNA dependent ATPase and heli...   167   8e-40
gi|1778351|gb|AAB40698.1| putative DNA dependent ATPase and heli...   167   8e-40
gi|2306809|gb|AAC51657.1| X-linked nuclear protein [Homo sapiens]     167   8e-40
gi|20336207|ref|NP_612115.1| transcriptional regulator ATRX isof...   167   8e-40
gi|34881163|ref|XP_217570.2| similar to ATRX protein [Rattus nor...   167   8e-40
gi|20336209|ref|NP_000480.2| transcriptional regulator ATRX isof...   167   8e-40
gi|38502929|sp|Q7YQM4|ATRX_PANTR Transcriptional regulator ATRX ...   167   8e-40
gi|17380440|sp|P46100|ATRX_HUMAN Transcriptional regulator ATRX ...   167   8e-40
gi|33354053|dbj|BAC81110.1| ATRX [Homo sapiens]                       167   8e-40
gi|38502928|sp|Q7YQM3|ATRX_PONPY Transcriptional regulator ATRX ...   167   8e-40
gi|20336205|ref|NP_612114.1| transcriptional regulator ATRX isof...   167   8e-40
gi|31206965|ref|XP_312449.1| ENSANGP00000021890 [Anopheles gambi...   165   2e-39
gi|50745936|ref|XP_420305.1| PREDICTED: similar to transcription...   164   7e-39
gi|21356675|ref|NP_651398.1| CG4548-PB [Drosophila melanogaster]...   163   1e-38
gi|11870012|gb|AAG40586.1| xnp/atr-x DNA helicase [Drosophila me...   163   1e-38
gi|32411129|ref|XP_326045.1| hypothetical protein [Neurospora cr...   159   1e-37
gi|17367114|sp|Q9U7E0|ATRX_CAEEL Transcriptional regulator ATRX ...   159   2e-37
gi|17509687|ref|NP_491423.1| human XNP gene related (156.2 kD) (...   159   2e-37
gi|7512482|pir||I38614 helicase II - human >gnl|BL_ORD_ID|551646...   158   4e-37
gi|2136369|pir||I54367 X-linked nuclear protein - human >gnl|BL_...   156   1e-36
gi|34865881|ref|XP_343472.1| similar to steroid receptor-interac...   155   3e-36
gi|39589507|emb|CAE74536.1| Hypothetical protein CBG22293 [Caeno...   155   3e-36
gi|20521664|dbj|BAA34529.2| KIAA0809 protein [Homo sapiens]           154   4e-36
gi|13507688|ref|NP_109655.1| steroid receptor-interacting SNF2 d...   154   4e-36
gi|24307995|ref|NP_055921.1| KIAA0809 protein; likely ortholog o...   153   1e-35
gi|19173162|ref|NP_596965.1| RAD26-LIKE DNA REPAIR AND RECOMBINA...   152   2e-35
gi|42561667|ref|NP_171871.2| helicase, putative [Arabidopsis tha...   152   2e-35
gi|25406739|pir||H86167 hypothetical protein [imported] - Arabid...   152   2e-35
gi|46125779|ref|XP_387443.1| hypothetical protein FG07267.1 [Gib...   152   2e-35
gi|45552815|ref|NP_995933.1| CG4049-PB [Drosophila melanogaster]...   151   5e-35
gi|45550507|ref|NP_611885.2| CG4049-PA [Drosophila melanogaster]...   151   5e-35
gi|50310019|ref|XP_455023.1| unnamed protein product [Kluyveromy...   150   8e-35
gi|42561809|ref|NP_172336.2| SNF2 domain-containing protein / he...   146   1e-33
gi|47229701|emb|CAG06897.1| unnamed protein product [Tetraodon n...   146   2e-33
gi|31241609|ref|XP_321235.1| ENSANGP00000008413 [Anopheles gambi...   146   2e-33
gi|50754185|ref|XP_414277.1| PREDICTED: similar to KIAA0809 prot...   146   2e-33
gi|14140291|gb|AAK54297.1| putative helicase [Oryza sativa (japo...   145   2e-33
gi|48855575|ref|ZP_00309734.1| COG0553: Superfamily II DNA/RNA h...   145   3e-33
gi|31198707|ref|XP_308301.1| ENSANGP00000010721 [Anopheles gambi...   144   8e-33
gi|50289211|ref|XP_447036.1| unnamed protein product [Candida gl...   142   2e-32
gi|25013136|gb|AAN71681.1| SD16865p [Drosophila melanogaster]         141   5e-32
gi|37699520|gb|AAB95091.3| 89B helicase [Drosophila melanogaster]     141   5e-32
gi|28317220|gb|AAO39617.1| GH12153p [Drosophila melanogaster]         141   5e-32
gi|24647318|ref|NP_732097.1| CG4261-PA [Drosophila melanogaster]...   141   5e-32
gi|11359241|pir||T40642 probable helicase - fission yeast (Schiz...   140   8e-32
gi|46434315|gb|EAK93728.1| hypothetical protein CaO19.11978 [Can...   140   8e-32
gi|19112872|ref|NP_596080.1| putative helicase [Schizosaccharomy...   140   8e-32
gi|45190351|ref|NP_984605.1| AEL256Cp [Eremothecium gossypii] >g...   139   2e-31
gi|23489925|gb|EAA21818.1| SNF2 family N-terminal domain, putati...   139   2e-31
gi|38110812|gb|EAA56476.1| hypothetical protein MG06447.4 [Magna...   139   2e-31
gi|49389246|dbj|BAD25208.1| putative SNF2 domain-containing prot...   138   3e-31
gi|37540442|ref|XP_088578.7| similar to putative repair and reco...   138   3e-31
gi|11359727|pir||T18404 chromatin remodelling complex protein SN...   138   4e-31
gi|23508249|ref|NP_700918.1| PfSNF2L [Plasmodium falciparum 3D7]...   138   4e-31
gi|26330394|dbj|BAC28927.1| unnamed protein product [Mus musculus]    137   5e-31
gi|8163804|gb|AAF73858.1| putative repair and recombination heli...   137   5e-31
gi|6325175|ref|NP_015243.1| Essential abundant protein involved ...   137   9e-31
gi|50289791|ref|XP_447327.1| unnamed protein product [Candida gl...   136   1e-30
gi|25407048|pir||F86218 protein F22O13.8 [imported] - Arabidopsi...   135   2e-30
gi|50309923|ref|XP_454975.1| unnamed protein product [Kluyveromy...   135   3e-30
gi|50729550|ref|XP_416560.1| PREDICTED: similar to chromodomain ...   134   5e-30
gi|17562600|ref|NP_504523.1| CHromoDomain protein, helicase Mi-2...   134   8e-30
gi|38110738|gb|EAA56417.1| hypothetical protein MG06388.4 [Magna...   132   2e-29
gi|25027819|ref|NP_737873.1| putative chromodomain helicase [Cor...   132   2e-29
gi|39593093|emb|CAE64562.1| Hypothetical protein CBG09312 [Caeno...   132   2e-29
gi|34872518|ref|XP_243049.2| similar to chromodomain helicase DN...   132   2e-29
gi|49078758|ref|XP_403100.1| hypothetical protein UM05485.1 [Ust...   132   2e-29
gi|31240219|ref|XP_320523.1| ENSANGP00000008665 [Anopheles gambi...   132   2e-29
gi|17569817|ref|NP_510140.1| CHromoDomain protein, DNA binding h...   132   2e-29
gi|38079062|ref|XP_196334.3| similar to chromodomain helicase DN...   132   2e-29
gi|34533780|dbj|BAC86802.1| unnamed protein product [Homo sapiens]    132   2e-29
gi|24308089|ref|NP_056372.1| chromodomain helicase DNA binding p...   132   2e-29
gi|49068584|ref|XP_398581.1| hypothetical protein UM00966.1 [Ust...   132   2e-29
gi|7512678|pir||T17269 hypothetical protein DKFZp434N231.1 - hum...   132   2e-29
gi|25412286|pir||B84645 hypothetical protein At2g25170 [imported...   132   2e-29
gi|42734377|ref|NP_004275.2| chromodomain helicase DNA binding p...   131   4e-29
gi|28175792|gb|AAH43501.1| Similar to RIKEN cDNA 4432404A22 gene...   131   4e-29
gi|46255694|gb|AAH05038.1| Unknown (protein for IMAGE:3618220) [...   131   4e-29
gi|7022541|dbj|BAA91637.1| unnamed protein product [Homo sapiens]     131   4e-29
gi|12654665|gb|AAH01171.1| Unknown (protein for IMAGE:3355762) [...   131   5e-29
gi|50749484|ref|XP_421656.1| PREDICTED: similar to DNA excision ...   131   5e-29
gi|47206539|emb|CAF92235.1| unnamed protein product [Tetraodon n...   131   5e-29
gi|26339542|dbj|BAC33442.1| unnamed protein product [Mus musculus]    130   7e-29
gi|15232471|ref|NP_190996.1| SNF2 domain-containing protein / he...   130   7e-29
gi|34854132|ref|XP_238731.2| similar to Chromodomain-helicase-DN...   130   7e-29
gi|35505451|gb|AAH57567.1| Chromodomain helicase DNA binding pro...   130   7e-29
gi|13386044|ref|NP_080815.1| chromodomain helicase DNA binding p...   130   7e-29
gi|26340418|dbj|BAC33872.1| unnamed protein product [Mus musculus]    130   7e-29
gi|6680928|ref|NP_031716.1| chromodomain helicase DNA binding pr...   130   7e-29
gi|476961|pir||A47392 chromodomain-helicase-DNA-binding protein,...   130   7e-29
gi|37521987|ref|NP_925364.1| probable helicase [Gloeobacter viol...   130   9e-29
gi|24666729|ref|NP_649111.1| CG9594-PA [Drosophila melanogaster]...   130   9e-29
gi|2645435|gb|AAB87384.1| CHD3 [Drosophila melanogaster]              130   9e-29
gi|5917757|gb|AAD56025.1| chromodomain helicase DNA binding prot...   130   9e-29
gi|17946168|gb|AAL49125.1| RE55932p [Drosophila melanogaster]         130   9e-29
gi|50761329|ref|XP_429117.1| PREDICTED: similar to chromodomain ...   130   1e-28
gi|46435782|gb|EAK95157.1| hypothetical protein CaO19.607 [Candi...   130   1e-28
gi|46435735|gb|EAK95111.1| hypothetical protein CaO19.8240 [Cand...   130   1e-28
gi|47227437|emb|CAG04585.1| unnamed protein product [Tetraodon n...   130   1e-28
gi|19552388|ref|NP_600390.1| putative helicase [Corynebacterium ...   129   1e-28
gi|48137452|ref|XP_393364.1| similar to SD21488p [Apis mellifera]     129   1e-28
gi|18400745|ref|NP_565587.1| chromatin remodeling factor CHD3 (P...   129   1e-28
gi|34862672|ref|XP_220044.2| similar to TBP-associated factor 17...   129   1e-28
gi|50759145|ref|XP_417537.1| PREDICTED: similar to chromodomain ...   129   1e-28
gi|34865564|ref|XP_347207.1| similar to TBP-associated factor 17...   129   1e-28
gi|20988306|gb|AAH29930.1| Similar to BTAF1 RNA polymerase II, B...   129   2e-28
gi|27477070|ref|NP_003963.1| BTAF1 RNA polymerase II, B-TFIID tr...   129   2e-28
gi|38105927|gb|EAA52297.1| hypothetical protein MG04989.4 [Magna...   129   2e-28
gi|5917756|gb|AAD56024.1| chromodomain helicase DNA binding prot...   129   2e-28
gi|50749615|ref|XP_421689.1| PREDICTED: similar to TBP-associate...   129   2e-28
gi|50548883|ref|XP_501912.1| hypothetical protein [Yarrowia lipo...   129   2e-28
gi|50285639|ref|XP_445248.1| unnamed protein product [Candida gl...   129   3e-28
gi|5917754|gb|AAD56022.1| chromodomain helicase DNA binding prot...   129   3e-28
gi|26353950|dbj|BAC40605.1| unnamed protein product [Mus musculus]    128   3e-28
gi|45384402|ref|NP_990272.1| chromo-helicase-DNA-binding on the ...   128   3e-28
gi|4557447|ref|NP_001261.1| chromodomain helicase DNA binding pr...   128   3e-28
gi|28975391|gb|AAO61781.1| chromo-helicase DNA-binding protein [...   128   3e-28
gi|38014266|gb|AAH01474.2| SRISNF2L protein [Homo sapiens]            128   3e-28
gi|50729410|ref|XP_416503.1| PREDICTED: similar to Chromodomain ...   128   3e-28
gi|46437717|gb|EAK97058.1| hypothetical protein CaO19.7401 [Cand...   128   3e-28
gi|47210118|emb|CAF91684.1| unnamed protein product [Tetraodon n...   128   3e-28
gi|4325130|gb|AAD17276.1| dMi-2 protein [Drosophila melanogaster]     128   4e-28
gi|24667055|ref|NP_649154.2| CG8103-PA [Drosophila melanogaster]...   128   4e-28
gi|5917753|gb|AAD56021.1| chromodomain helicase DNA binding prot...   128   4e-28
gi|6322065|ref|NP_012140.1| helicase related protein, snf2 homol...   128   4e-28
gi|32414725|ref|XP_327842.1| hypothetical protein [Neurospora cr...   128   4e-28
gi|49093726|ref|XP_408324.1| hypothetical protein AN4187.2 [Aspe...   128   4e-28
gi|49134234|ref|XP_413214.1| hypothetical protein AN9077.2 [Aspe...   127   6e-28
gi|5917755|gb|AAD56023.1| chromodomain helicase DNA binding prot...   127   6e-28
gi|50746413|ref|XP_420485.1| PREDICTED: similar to hypothetical ...   127   7e-28
gi|41053461|ref|NP_956607.1| similar to chromodomain helicase DN...   127   7e-28
gi|46125857|ref|XP_387482.1| hypothetical protein FG07306.1 [Gib...   127   7e-28
gi|30687235|ref|NP_197432.2| homeotic gene regulator, putative [...   127   7e-28
gi|42525525|ref|NP_970623.1| Snf2 family protein [Treponema dent...   127   7e-28
gi|4557453|ref|NP_001264.1| chromodomain helicase DNA binding pr...   127   1e-27
gi|15230608|ref|NP_187252.1| homeotic gene regulator, putative [...   127   1e-27
gi|34858460|ref|XP_232354.2| similar to chromodomain helicase DN...   127   1e-27
gi|50256237|gb|EAL18964.1| hypothetical protein CNBI2250 [Crypto...   127   1e-27
gi|39204553|ref|NP_666091.1| chromodomain helicase DNA binding p...   127   1e-27
gi|50310529|ref|XP_455284.1| unnamed protein product [Kluyveromy...   127   1e-27
gi|24047226|gb|AAH38596.1| CHD4 protein [Homo sapiens]                127   1e-27
gi|26330021|dbj|BAC28749.1| unnamed protein product [Mus musculus]    127   1e-27
gi|32411725|ref|XP_326343.1| hypothetical protein [Neurospora cr...   127   1e-27
gi|28422180|gb|AAH46866.1| B230399n07-prov protein [Xenopus laevis]   126   1e-27
gi|172764|gb|AAA35120.1| STH1 protein                                 126   1e-27
gi|6319722|ref|NP_009804.1| has strong homology to Drosophila IS...   126   1e-27
gi|626929|pir||S46122 SNF2 protein homolog YBR245c - yeast (Sacc...   126   1e-27
gi|17544426|ref|NP_503012.1| DNA repair protein (4R905) [Caenorh...   126   1e-27
gi|38233618|ref|NP_939385.1| SNF2/RAD54 family protein [Coryneba...   126   2e-27
gi|49089342|ref|XP_406392.1| hypothetical protein AN2255.2 [Aspe...   126   2e-27
gi|34870936|ref|XP_220602.2| similar to zinc-finger helicase [Ra...   126   2e-27
gi|3298562|gb|AAC39923.1| zinc-finger helicase [Homo sapiens]         126   2e-27
gi|50257851|gb|EAL20552.1| hypothetical protein CNBE4720 [Crypto...   126   2e-27
gi|5921743|sp|Q12873|CHD3_HUMAN Chromodomain helicase-DNA-bindin...   126   2e-27
gi|50557340|ref|XP_506078.1| hypothetical protein [Yarrowia lipo...   125   2e-27
gi|47211690|emb|CAF91815.1| unnamed protein product [Tetraodon n...   125   2e-27
gi|34901830|ref|NP_912261.1| putative zinc-finger helicase [Oryz...   125   2e-27
gi|33146539|dbj|BAC79716.1| chromodomain helicase DNA binding pr...   125   2e-27
gi|50422435|ref|XP_459783.1| unnamed protein product [Debaryomyc...   125   2e-27
gi|47211649|emb|CAF94986.1| unnamed protein product [Tetraodon n...   125   3e-27
gi|34857217|ref|XP_218790.2| similar to Chromodomain-helicase-DN...   125   3e-27
gi|50310725|ref|XP_455384.1| unnamed protein product [Kluyveromy...   125   3e-27
gi|34873566|ref|XP_225106.2| similar to putative repair and reco...   125   3e-27
gi|45190542|ref|NP_984796.1| AEL065Cp [Eremothecium gossypii] >g...   125   3e-27
gi|46119555|ref|ZP_00176801.2| COG0553: Superfamily II DNA/RNA h...   125   3e-27
gi|4557449|ref|NP_001262.1| chromodomain helicase DNA binding pr...   125   3e-27
gi|28975395|gb|AAO61783.1| chromo-helicase DNA-binding protein [...   125   3e-27
gi|45198479|ref|NP_985508.1| AFL040Wp [Eremothecium gossypii] >g...   125   4e-27
gi|50420017|ref|XP_458541.1| unnamed protein product [Debaryomyc...   125   4e-27
gi|31322808|gb|AAP31846.1| Brg1p [Tetrahymena thermophila]            125   4e-27
gi|21622371|emb|CAD37001.1| related to DNA repair protein RAD26 ...   124   5e-27
gi|50399992|gb|AAT76380.1| putative DNA-dependent ATPase [Oryza ...   124   5e-27
gi|46121269|ref|XP_385189.1| hypothetical protein FG05013.1 [Gib...   124   6e-27
gi|50549971|ref|XP_502458.1| hypothetical protein [Yarrowia lipo...   124   6e-27
gi|4557565|ref|NP_000115.1| excision repair cross-complementing ...   124   6e-27
gi|7485004|pir||T00713 helicase homolog F22O13.8 - Arabidopsis t...   124   8e-27
gi|45201219|ref|NP_986789.1| AGR123Cp [Eremothecium gossypii] >g...   123   1e-26
gi|28278128|gb|AAH45534.1| Hypothetical protein DKFZp762K2015 [H...   123   1e-26
gi|45190977|ref|NP_985231.1| AER375Cp [Eremothecium gossypii] >g...   123   1e-26
gi|6329728|dbj|BAA86436.1| KIAA1122 protein [Homo sapiens]            123   1e-26
gi|32420105|ref|XP_330496.1| hypothetical protein [Neurospora cr...   123   1e-26
gi|46441784|gb|EAL01078.1| hypothetical protein CaO19.239 [Candi...   122   2e-26
gi|50288627|ref|XP_446743.1| unnamed protein product [Candida gl...   122   2e-26
gi|34327954|dbj|BAA20768.2| KIAA0309 [Homo sapiens]                   122   2e-26
gi|5730067|ref|NP_006653.1| Snf2-related CBP activator protein [...   122   2e-26
gi|47228866|emb|CAG09381.1| unnamed protein product [Tetraodon n...   122   2e-26
gi|34859306|ref|XP_341933.1| similar to Snf2-related CBP activat...   122   2e-26
gi|34535199|dbj|BAC87237.1| unnamed protein product [Homo sapiens]    122   2e-26
gi|28972640|dbj|BAC65736.1| mKIAA1122 protein [Mus musculus]          122   3e-26
gi|38084222|ref|XP_132597.2| SWI/SNF-related, matrix-associated ...   122   3e-26
gi|29427670|sp|Q04692|SRD1_MOUSE SWI/SNF-related, matrix associa...   122   3e-26
gi|38089687|ref|XP_284439.2| RIKEN cDNA 1810014J18 [Mus musculus]     122   3e-26
gi|1083308|pir||A56559 enhancer-trap-locus-1 protein - mouse (fr...   122   3e-26
gi|46227736|gb|EAK88656.1| SWI/SNF related putative transcriptio...   122   3e-26
gi|27502706|gb|AAH42442.1| Smarcad1 protein [Mus musculus]            122   3e-26
gi|19075044|ref|NP_586645.1| similarity to CHROMODOMAIN HELICASE...   122   3e-26
gi|14149730|ref|NP_064544.1| hypothetical protein DKFZp762K2015 ...   121   4e-26
gi|34328020|dbj|BAB13390.3| KIAA1564 protein [Homo sapiens]           121   4e-26
gi|41149958|ref|XP_370738.1| helicase with SNF2 domain 1 [Homo s...   121   4e-26
gi|23396512|sp|Q9HCK8|CHD8_HUMAN Chromodomain-helicase-DNA-bindi...   121   4e-26
gi|50306047|ref|XP_452985.1| unnamed protein product [Kluyveromy...   121   4e-26
gi|49071866|ref|XP_400222.1| hypothetical protein UM02607.1 [Ust...   121   4e-26
gi|38104231|gb|EAA50830.1| hypothetical protein MG04589.4 [Magna...   121   4e-26
gi|16805045|ref|NP_473074.1| DNA helicase, putative [Plasmodium ...   121   4e-26
gi|8977885|emb|CAB95769.1| hypothetical protein [Homo sapiens]        121   4e-26
gi|42569009|ref|NP_178970.2| chromodomain-helicase-DNA-binding f...   121   5e-26
gi|42564102|ref|NP_187887.3| SNF2 domain-containing protein / he...   121   5e-26
gi|25411492|pir||C84507 hypothetical protein At2g13370 [imported...   121   5e-26
gi|11994423|dbj|BAB02425.1| helicase-like protein [Arabidopsis t...   121   5e-26
gi|49355790|ref|NP_079410.3| chromodomain helicase DNA binding p...   121   5e-26
gi|34327952|dbj|BAA20767.2| KIAA0308 [Homo sapiens]                   121   5e-26
gi|39597216|emb|CAE59443.1| Hypothetical protein CBG02816 [Caeno...   120   7e-26
gi|31216396|ref|XP_316223.1| ENSANGP00000017802 [Anopheles gambi...   120   7e-26
gi|50547703|ref|XP_501321.1| hypothetical protein [Yarrowia lipo...   120   9e-26
gi|17568089|ref|NP_510607.1| human Cockayne Syndrome B homolog (...   120   9e-26
gi|34851357|ref|XP_226325.2| similar to Probable chromodomain-he...   120   9e-26
gi|30145715|emb|CAB03135.2| Hypothetical protein F53H4.1 [Caenor...   120   9e-26
gi|50425079|ref|XP_461131.1| unnamed protein product [Debaryomyc...   120   1e-25
gi|39593716|emb|CAE62008.1| Hypothetical protein CBG06016 [Caeno...   120   1e-25
gi|46122747|ref|XP_385927.1| hypothetical protein FG05751.1 [Gib...   120   1e-25
gi|45524679|ref|ZP_00175949.1| COG0553: Superfamily II DNA/RNA h...   120   1e-25
gi|7497824|pir||T28937 hypothetical protein C52B9.8 - Caenorhabd...   120   1e-25
gi|17551114|ref|NP_508736.1| brahma (XE918) [Caenorhabditis eleg...   120   1e-25
gi|49476336|gb|AAT66509.1| KISH2; hKISH2; Kismet homolog 2 [Homo...   120   1e-25
gi|17233188|ref|NP_490278.1| putative helicase [Nostoc sp. PCC 7...   120   1e-25
gi|38109409|gb|EAA55288.1| hypothetical protein MG06945.4 [Magna...   120   1e-25
gi|38085063|ref|XP_129248.4| RIKEN cDNA E430027O22 [Mus musculus]     119   2e-25
gi|39583648|emb|CAE63752.1| Hypothetical protein CBG08287 [Caeno...   119   2e-25
gi|15896248|ref|NP_349597.1| Superfamily II DNA/RNA helicase, SN...   119   2e-25
gi|48137091|ref|XP_396786.1| similar to ENSANGP00000017802 [Apis...   119   2e-25
gi|18463957|gb|AAL73042.1| chromatin complex subunit A101 [Zea m...   119   2e-25
gi|23474884|ref|ZP_00130175.1| COG0553: Superfamily II DNA/RNA h...   119   2e-25
gi|37542684|gb|AAL47211.1| chromatin-remodeling factor CHD3 [Ory...   119   2e-25
gi|46190976|ref|ZP_00120784.2| COG0553: Superfamily II DNA/RNA h...   119   2e-25
gi|49075576|ref|XP_401845.1| hypothetical protein UM04230.1 [Ust...   119   2e-25
gi|17539642|ref|NP_502082.1| phasmid Socket Absent PSA-4, homolo...   119   2e-25
gi|45357056|gb|AAS58484.1| SNF2P [Triticum monococcum]                119   2e-25
gi|738309|prf||1924378A nucler protein GRB1                           119   2e-25
gi|481644|pir||S39059 protein BRG1 - human                            119   2e-25
gi|24373219|ref|NP_717262.1| Snf2 family protein [Shewanella one...   119   2e-25
gi|23466281|ref|NP_696884.1| possible helicase [Bifidobacterium ...   119   2e-25
gi|46447008|ref|YP_008373.1| conserved hypothetical protein [Par...   119   2e-25
gi|37542688|gb|AAL47203.1| chromatin-remodeling factor CHD3 [Ory...   119   2e-25
gi|46228613|gb|EAK89483.1| Swr1p like SWI/SNF2 family ATpase wit...   119   3e-25
gi|38102523|gb|EAA49354.1| hypothetical protein MG01012.4 [Magna...   119   3e-25
gi|17231890|ref|NP_488438.1| SNF2 helicase homolog [Nostoc sp. P...   119   3e-25
gi|19115879|ref|NP_594967.1| putative transcriptional regulator;...   119   3e-25
gi|38102212|gb|EAA49078.1| hypothetical protein MG00736.4 [Magna...   119   3e-25
gi|23485550|gb|EAA20470.1| DOMINO B-related [Plasmodium yoelii y...   118   3e-25
gi|38108120|gb|EAA54198.1| hypothetical protein MG02183.4 [Magna...   118   3e-25
gi|17556709|ref|NP_499653.1| prion-like Q/N-rich domain protein ...   118   3e-25
gi|50470843|emb|CAC35851.2| Hypothetical protein Y111B2A.22 [Cae...   118   3e-25
gi|45451721|gb|AAS65429.1| Swi/Snf family ATPase [Caenorhabditis...   118   3e-25
gi|46435400|gb|EAK94782.1| hypothetical protein CaO19.4437 [Cand...   118   5e-25
gi|46443171|gb|EAL02455.1| hypothetical protein CaO19.10553 [Can...   118   5e-25
gi|49089400|ref|XP_406415.1| hypothetical protein AN2278.2 [Aspe...   118   5e-25
gi|32141133|ref|NP_733524.1| putative helicase [Streptomyces coe...   118   5e-25
gi|40254124|ref|NP_444354.2| SWI/SNF related, matrix associated,...   118   5e-25
gi|39585279|emb|CAE57522.1| Hypothetical protein CBG00497 [Caeno...   118   5e-25
gi|50551421|ref|XP_503184.1| hypothetical protein [Yarrowia lipo...   118   5e-25
gi|17538806|ref|NP_501545.1| steroid receptor-interacting SNF2 d...   118   5e-25
gi|19112177|ref|NP_595385.1| helicase C protein with SNF2 domain...   117   6e-25
gi|7511822|pir||T13944 chromodomain-helicase-DNA-binding protein...   117   6e-25
gi|50426953|ref|XP_462077.1| unnamed protein product [Debaryomyc...   117   6e-25
gi|50294289|ref|XP_449556.1| unnamed protein product [Candida gl...   117   6e-25
gi|14028669|gb|AAK52454.1| DNA-dependent ATPase SNF2H [Mus muscu...   117   6e-25
gi|45199055|ref|NP_986084.1| AFR537Wp [Eremothecium gossypii] >g...   117   6e-25
gi|50875884|emb|CAG35724.1| probable helicase [Desulfotalea psyc...   117   6e-25
gi|30840950|gb|AAL29689.1| Snf2-related chromatin remodeling fac...   117   6e-25
gi|50551961|ref|XP_503455.1| hypothetical protein [Yarrowia lipo...   117   1e-24
gi|17137266|ref|NP_477197.1| CG3733-PA [Drosophila melanogaster]...   117   1e-24
gi|32412838|ref|XP_326899.1| hypothetical protein [Neurospora cr...   117   1e-24
gi|15836368|ref|NP_300892.1| SWI/SNF family helicase_1 [Chlamydo...   117   1e-24
gi|15618744|ref|NP_225030.1| SWI/SNF family helicase_1 [Chlamydo...   117   1e-24
gi|40215423|gb|AAR82736.1| SD21488p [Drosophila melanogaster]         117   1e-24
gi|2967452|dbj|BAA25173.1| hSNF2H [Homo sapiens] >gnl|BL_ORD_ID|...   117   1e-24
gi|21071058|ref|NP_003592.2| SWI/SNF-related matrix-associated a...   117   1e-24
gi|34851567|ref|XP_226380.2| similar to ATP-dependent chromatin ...   117   1e-24
gi|38566825|emb|CAE76132.1| related to helicase-DNA-binding prot...   117   1e-24
gi|17986031|ref|NP_523441.1| CG3696-PA [Drosophila melanogaster]...   116   1e-24
gi|16332119|ref|NP_442847.1| helicase of the snf2/rad54 family [...   116   1e-24
gi|50753684|ref|XP_414088.1| PREDICTED: similar to hypothetical ...   116   1e-24
gi|45199080|ref|NP_986109.1| AFR562Cp [Eremothecium gossypii] >g...   116   1e-24
gi|50310795|ref|XP_455420.1| unnamed protein product [Kluyveromy...   116   1e-24
gi|42567315|ref|NP_194918.2| chromatin remodeling factor, putati...   116   1e-24
gi|6320541|ref|NP_010621.1| Swi2/Snf2-related ATPase, component ...   116   2e-24
gi|34881247|ref|XP_228546.2| similar to SNF2/RAD54 family protei...   116   2e-24
gi|6324879|ref|NP_014948.1| has strong homology to Drosophila IS...   116   2e-24
gi|45357049|gb|AAS58478.1| SNF2P [Hordeum vulgare subsp. vulgare]     116   2e-24
gi|23193481|gb|AAN14535.1| SNF2P [Hordeum vulgare]                    116   2e-24
gi|39585145|emb|CAE57388.1| Hypothetical protein CBG00336 [Caeno...   116   2e-24
gi|50290467|ref|XP_447665.1| unnamed protein product [Candida gl...   115   2e-24
gi|33944265|ref|XP_340280.1| transcription activator, putative [...   115   2e-24
gi|39930329|ref|NP_035547.1| SWI/SNF related, matrix associated,...   115   2e-24
gi|49068154|ref|XP_398366.1| hypothetical protein UM00751.1 [Ust...   115   2e-24
gi|50738005|ref|XP_419222.1| PREDICTED: similar to Probable chro...   115   2e-24
gi|34860432|ref|XP_343359.1| SWI/SNF related, matrix associated,...   115   2e-24
gi|50312307|ref|XP_456186.1| unnamed protein product [Kluyveromy...   115   2e-24
gi|2143481|pir||I53078 homeotic gene regulator - mouse (fragment...   115   2e-24
gi|46914265|emb|CAG21045.1| hypothetical protein [Photobacterium...   115   2e-24
gi|22095171|emb|CAD43278.1| brahma-related protein 1 [Rattus nor...   115   2e-24
gi|1711407|sp|P51532|SN24_HUMAN Possible global transcription ac...   115   2e-24
gi|21071056|ref|NP_003063.2| SWI/SNF-related matrix-associated a...   115   2e-24
gi|47086607|ref|NP_997881.1| phasmid Socket Absent PSA-4, homolo...   115   2e-24
gi|47215569|emb|CAG10740.1| unnamed protein product [Tetraodon n...   115   2e-24
gi|45384232|ref|NP_990390.1| BRG1 protein [Gallus gallus] >gnl|B...   115   2e-24
gi|10946129|gb|AAG24790.1| SMARCA4 isoform 2 [Homo sapiens]           115   2e-24
gi|49096640|ref|XP_409780.1| hypothetical protein AN5643.2 [Aspe...   115   3e-24
gi|46446009|ref|YP_007374.1| putative rapA, a bacterial member o...   115   3e-24
gi|49086734|ref|XP_405392.1| hypothetical protein AN1255.2 [Aspe...   115   3e-24
gi|34899102|ref|NP_910897.1| putative chromodomain-helicase-DNA-...   115   3e-24
gi|50426167|ref|XP_461680.1| unnamed protein product [Debaryomyc...   115   3e-24
gi|23489816|gb|EAA21734.1| chromodomain-helicase-DNA-binding pro...   115   3e-24
gi|50745990|ref|XP_420328.1| PREDICTED: similar to SWI/SNF-relat...   115   3e-24
gi|32563629|ref|NP_491994.2| chromo domain and SNF2 related doma...   115   4e-24
gi|47209419|emb|CAF93109.1| unnamed protein product [Tetraodon n...   115   4e-24
gi|34866132|ref|XP_232671.2| similar to Probable chromodomain-he...   115   4e-24
gi|33440456|gb|AAH56199.1| Smarca2 protein [Mus musculus]             115   4e-24
gi|45384078|ref|NP_990470.1| BRM protein [Gallus gallus] >gnl|BL...   115   4e-24
gi|49523317|gb|AAH75641.1| Smarca2 protein [Mus musculus]             115   4e-24
gi|19114572|ref|NP_593660.1| putative helicase [Schizosaccharomy...   115   4e-24
gi|31745178|ref|NP_853634.1| SWI/SNF related, matrix associated,...   115   4e-24
gi|30578398|ref|NP_444353.2| SWI/SNF related, matrix associated,...   115   4e-24
gi|34862108|ref|XP_342040.1| similar to SWI/SNF-related matrix-a...   115   4e-24
gi|48255900|ref|NP_003061.3| SWI/SNF-related matrix-associated a...   115   4e-24
gi|11267547|pir||T43334 helicase-related protein hrp1 - fission ...   115   4e-24
gi|19704495|ref|NP_604057.1| SWF/SNF family helicase [Fusobacter...   115   4e-24
gi|47228067|emb|CAF97696.1| unnamed protein product [Tetraodon n...   115   4e-24
gi|2136177|pir||S45251 SNF2alpha protein - human >gnl|BL_ORD_ID|...   115   4e-24
gi|48255898|ref|NP_620614.2| SWI/SNF-related matrix-associated a...   115   4e-24
gi|39586406|emb|CAE74063.1| Hypothetical protein CBG21715 [Caeno...   115   4e-24
gi|1711406|sp|P51531|SN22_HUMAN Possible global transcription ac...   115   4e-24
gi|7504867|pir||T23056 hypothetical protein H06O01.2 - Caenorhab...   115   4e-24
gi|228213|prf||1718318A GAM1 gene                                     114   5e-24
gi|6324864|ref|NP_014933.1| involved in the coordinate regulatio...   114   5e-24
gi|23396522|sp|Q9P2D1|CHD7_HUMAN Chromodomain-helicase-DNA-bindi...   114   5e-24
gi|15226870|ref|NP_178318.1| SNF2 domain-containing protein / he...   114   5e-24
gi|46125449|ref|XP_387278.1| hypothetical protein FG07102.1 [Gib...   114   5e-24
gi|46580490|ref|YP_011298.1| Snf2 family protein [Desulfovibrio ...   114   5e-24
gi|42658959|ref|XP_098762.6| KIAA1416 protein [Homo sapiens]          114   5e-24
gi|46137317|ref|XP_390350.1| hypothetical protein FG10174.1 [Gib...   114   5e-24
gi|23612816|ref|NP_704355.1| ATP-dependant helicase, putative [P...   114   5e-24
gi|50256686|gb|EAL19409.1| hypothetical protein CNBH1020 [Crypto...   114   6e-24
gi|47226612|emb|CAG07771.1| unnamed protein product [Tetraodon n...   114   6e-24
gi|6321012|ref|NP_011091.1| Sole S. cerevisiae member of CHD gen...   114   6e-24
gi|50293969|ref|XP_449396.1| unnamed protein product [Candida gl...   114   6e-24
gi|50424285|ref|XP_460729.1| unnamed protein product [Debaryomyc...   114   6e-24
gi|46137507|ref|XP_390445.1| conserved hypothetical protein [Gib...   114   8e-24
gi|31211661|ref|XP_314800.1| ENSANGP00000011045 [Anopheles gambi...   114   8e-24
gi|15241584|ref|NP_199293.1| chromodomain-helicase-DNA-binding f...   114   8e-24
gi|19421557|gb|AAK56405.1| chromodomain helicase DNA binding pro...   114   8e-24
gi|23396493|sp|Q8TD26|CHD6_HUMAN Chromodomain-helicase-DNA-bindi...   114   8e-24
gi|23485366|gb|EAA20388.1| Arabidopsis thaliana BRAHMA ortholog-...   114   8e-24
gi|23124140|ref|ZP_00106150.1| COG0553: Superfamily II DNA/RNA h...   114   8e-24
gi|50555161|ref|XP_504989.1| hypothetical protein [Yarrowia lipo...   114   8e-24
gi|29244924|ref|NP_115597.3| chromodomain helicase DNA binding p...   114   8e-24
gi|26348885|dbj|BAC38082.1| unnamed protein product [Mus musculus]    114   8e-24
gi|39589511|emb|CAE74540.1| Hypothetical protein CBG22297 [Caeno...   114   8e-24
gi|32404476|ref|XP_322851.1| hypothetical protein [Neurospora cr...   114   8e-24
gi|20152037|gb|AAM11378.1| LD39323p [Drosophila melanogaster]         113   1e-23
gi|32405162|ref|XP_323194.1| hypothetical protein [Neurospora cr...   113   1e-23
gi|30023277|ref|NP_834908.1| SWF/SNF family helicase [Bacillus c...   113   1e-23
gi|17737463|ref|NP_523719.1| CG8625-PA [Drosophila melanogaster]...   113   1e-23
gi|20151803|gb|AAM11261.1| RH13158p [Drosophila melanogaster]         113   1e-23
gi|34860336|ref|XP_230814.2| similar to chromodomain helicase DN...   113   1e-23
gi|29377168|ref|NP_816322.1| Snf2 family protein [Enterococcus f...   113   1e-23
gi|17508849|ref|NP_491426.1| chromodomain-helicase-DNA-binding p...   113   1e-23
gi|50254945|gb|EAL17685.1| hypothetical protein CNBL2000 [Crypto...   113   1e-23
gi|49069018|ref|XP_398798.1| hypothetical protein UM01183.1 [Ust...   113   1e-23
gi|48858203|ref|ZP_00312165.1| COG0553: Superfamily II DNA/RNA h...   113   1e-23
gi|19115773|ref|NP_594861.1| putative transcriptional regulator ...   112   2e-23
gi|50746279|ref|XP_420423.1| PREDICTED: similar to hSNF2H [Gallu...   112   2e-23
gi|41151554|ref|XP_372231.1| hypothetical protein FLJ20105 [Homo...   112   2e-23
gi|26554357|ref|NP_758291.1| helicase with SNF2 domain [Mycoplas...   112   2e-23
gi|25144179|ref|NP_498468.2| yeast Imitation SWI homolog (116.7 ...   112   2e-23
gi|24664907|ref|NP_730088.1| CG5942-PD [Drosophila melanogaster]...   112   2e-23
gi|479805|pir||S35458 SNF2 protein homolog - human (fragment) >g...   112   2e-23
gi|283699|pir||A42091 transcription activator SNF2/SWI2 homolog ...   112   2e-23
gi|17985967|ref|NP_536746.1| CG5942-PA [Drosophila melanogaster]...   112   2e-23
gi|21071044|ref|NP_003060.2| SWI/SNF-related matrix-associated a...   112   2e-23
gi|39583607|emb|CAE65711.1| Hypothetical protein CBG10790 [Caeno...   112   2e-23
gi|1078857|pir||S44645 hypothetical protein F37A4.8 - Caenorhabd...   112   2e-23
gi|134584|sp|P28370|SN21_HUMAN Possible global transcription act...   112   2e-23
gi|5738867|emb|CAB52874.1| SPCC830.01c [Schizosaccharomyces pombe]    112   3e-23
gi|49616741|gb|AAT67217.1| SWI/SNF-related matrix-associated act...   112   3e-23
gi|31205071|ref|XP_311484.1| ENSANGP00000013716 [Anopheles gambi...   112   3e-23
gi|34881588|ref|XP_229124.2| similar to SWI/SNF-related matrix-a...   112   3e-23
gi|42571243|ref|NP_973695.1| transcription regulatory protein SN...   112   3e-23
gi|34783716|gb|AAH57115.1| Smarca1 protein [Mus musculus]             112   3e-23
gi|14028667|gb|AAK52453.1| DNA-dependent ATPase SNF2L [Mus muscu...   112   3e-23
gi|45185972|ref|NP_983688.1| ACR286Cp [Eremothecium gossypii] >g...   112   3e-23
gi|46397098|sp|O94421|YQGE_SCHPO Hypothetical helicase C1620.14c...   112   3e-23
gi|26351187|dbj|BAC39230.1| unnamed protein product [Mus musculu...   111   4e-23
gi|46228555|gb|EAK89425.1| brahma like protein with a HSA domain...   111   4e-23
gi|12329968|emb|CAC24685.1| possible SNF2-related helicase [Leis...   111   4e-23
gi|26337087|dbj|BAC32227.1| unnamed protein product [Mus musculus]    111   4e-23
gi|34855956|ref|XP_231860.2| similar to mKIAA1122 protein [Rattu...   111   4e-23
gi|27414501|ref|NP_666347.2| SNF2/RAD54 family protein [Mus musc...   111   4e-23
gi|26324980|dbj|BAC26244.1| unnamed protein product [Mus musculus]    111   4e-23
gi|29840686|ref|NP_829792.1| helicase, Snf2/Rad54 family [Chlamy...   111   4e-23
gi|32475836|ref|NP_868830.1| probable swi/snf family helicase 2 ...   111   6e-23
gi|15240074|ref|NP_201476.1| SNF2 domain-containing protein / he...   111   6e-23
gi|21397710|ref|NP_653695.1| SNF2_N, SNF2 and others N-terminal ...   111   6e-23
gi|47569742|ref|ZP_00240415.1| helicase, SNF2/RAD54 family [Baci...   111   6e-23
gi|49481223|ref|YP_039235.1| SNF2 family helicase [Bacillus thur...   111   6e-23
gi|50293735|ref|XP_449279.1| unnamed protein product [Candida gl...   110   7e-23
gi|50557192|ref|XP_506004.1| hypothetical protein [Yarrowia lipo...   110   7e-23
gi|42520462|ref|NP_966377.1| helicase, SNF2 family [Wolbachia en...   110   7e-23
gi|6319300|ref|NP_009383.1| Protein whose overexpression affects...   110   7e-23
gi|15615476|ref|NP_243779.1| SNF2 helicase [Bacillus halodurans ...   110   7e-23
gi|15836382|ref|NP_300906.1| SWI/SNF family helicase_2 [Chlamydo...   110   7e-23
gi|19074741|ref|NP_586247.1| similarity to THE ATPase COMPONENT ...   110   9e-23
gi|47206405|emb|CAG01534.1| unnamed protein product [Tetraodon n...   110   9e-23
gi|32398963|emb|CAD98428.1| SNF2 helicase, possible [Cryptospori...   110   9e-23
gi|29828134|ref|NP_822768.1| putative SNF2/RAD54 family helicase...   110   9e-23
gi|42784409|ref|NP_981656.1| helicase, putative [Bacillus cereus...   110   9e-23
gi|49092974|ref|XP_407948.1| hypothetical protein AN3811.2 [Aspe...   110   9e-23
gi|26383564|dbj|BAC25543.1| unnamed protein product [Mus musculus]    110   1e-22
gi|42569958|ref|NP_182126.2| transcription regulatory protein SN...   110   1e-22
gi|49089418|ref|XP_406422.1| hypothetical protein AN2285.2 [Aspe...   110   1e-22
gi|50303907|ref|XP_451901.1| unnamed protein product [Kluyveromy...   110   1e-22
gi|25408956|pir||G84897 hypothetical protein At2g46020 [imported...   110   1e-22
gi|15618758|ref|NP_225044.1| SWI/SNF family helicase_2 [Chlamydo...   110   1e-22
gi|1176015|sp|P43610|YFK8_YEAST Hypothetical 88.7 kDa helicase i...   109   2e-22
gi|30694618|ref|NP_191289.2| transcriptional activator, putative...   109   2e-22
gi|11357327|pir||T45808 helicase-like protein - Arabidopsis thal...   109   2e-22


>gi|17508659|ref|NP_492438.1| RADiation sensitivity abnormal/yeast
            RAD-related RAD-54, DNA repair protein (rad-54)
            [Caenorhabditis elegans]
 gi|6580237|emb|CAB63308.1| C. elegans RAD-54 protein (corresponding
            sequence W06D4.6) [Caenorhabditis elegans]
 gi|6580248|emb|CAA22254.2| Hypothetical protein W06D4.6
            [Caenorhabditis elegans]
          Length = 818

 Score = 1031 bits (2667), Expect = 0.0
 Identities = 513/526 (97%), Positives = 513/526 (97%)
 Frame = +1

Query: 1    MPKKTFENLEDSHGKDVNIPVELPKRKREVTPENLPSTSSTAPTQKRKSLGYSGRTEEPK 180
            MPKKTFENLEDSHGKDVNIPVELPKRKREVTPENLPSTSSTAPTQKRKSLGYSGRTEEPK
Sbjct: 1    MPKKTFENLEDSHGKDVNIPVELPKRKREVTPENLPSTSSTAPTQKRKSLGYSGRTEEPK 60

Query: 181  NIHKTFISPFSTSVSPSKQGLRRRKKALPAIEPPVSVEEASPLRFVNIDVFSRRMASESS 360
            NIHKTFISPFSTSVSPSKQGLRRRKKALPAIEPPVSVEEASPLRFVNIDVFSRRMASESS
Sbjct: 61   NIHKTFISPFSTSVSPSKQGLRRRKKALPAIEPPVSVEEASPLRFVNIDVFSRRMASESS 120

Query: 361  DHDAMIAKLLSRKFSIPMEGYMXXXXXXXXXXXXXKCALFDPYHEGALILYAPEHLSEHA 540
            DHDAMIAKLLSRKFSIPMEGYM             KCALFDPYHEGALILYAPEHLSEHA
Sbjct: 121  DHDAMIAKLLSRKFSIPMEGYMLSGRSLGLGGNRRKCALFDPYHEGALILYAPEHLSEHA 180

Query: 541  QLKEDKDRKVHVVADPVVGKILRPHQRDGVKFMWDCVTGINIPEFHGCIMADEMGLGKTL 720
            QLKEDKDRKVHVVADPVVGKILRPHQRDGVKFMWDCVTGINIPEFHGCIMADEMGLGKTL
Sbjct: 181  QLKEDKDRKVHVVADPVVGKILRPHQRDGVKFMWDCVTGINIPEFHGCIMADEMGLGKTL 240

Query: 721  QCISLLWTLLRQSPDACPTVSKSIIVCPSSLVKNWDKEIKKWLGTRLNAMPVDSGKREQI 900
            QCISLLWTLLRQSPDACPTVSKSIIVCPSSLVKNWDKEIKKWLGTRLNAMPVDSGKREQI
Sbjct: 241  QCISLLWTLLRQSPDACPTVSKSIIVCPSSLVKNWDKEIKKWLGTRLNAMPVDSGKREQI 300

Query: 901  IACLNSFMADSKMRCAIPVLIISYETFRLYANILHSGDVGIVICDEGHRLKNSENLTYQA 1080
            IACLNSFMADSKMRCAIPVLIISYETFRLYANILHSGDVGIVICDEGHRLKNSENLTYQA
Sbjct: 301  IACLNSFMADSKMRCAIPVLIISYETFRLYANILHSGDVGIVICDEGHRLKNSENLTYQA 360

Query: 1081 LSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPGLLGTASEFRKKFENAILKGRDADASS 1260
            LSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPGLLGTASEFRKKFENAILKGRDADASS
Sbjct: 361  LSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPGLLGTASEFRKKFENAILKGRDADASS 420

Query: 1261 EDQKKGEEKTKEMISLVEKCIIRRTSALLTKYLPVKYEHIICCKNSTLQETLYNKLIECE 1440
            EDQKKGEEKTKEMISLVEKCIIRRTSALLTKYLPVKYEHIICCKNSTLQETLYNKLIECE
Sbjct: 421  EDQKKGEEKTKEMISLVEKCIIRRTSALLTKYLPVKYEHIICCKNSTLQETLYNKLIECE 480

Query: 1441 KQNRIVEKDKGATASALSFITHLKKLCNHPYLVYDEFQKPDNRFRN 1578
            KQNRIVEKDKGATASALSFITHLKKLCNHPYLVYDEFQKPDNRFRN
Sbjct: 481  KQNRIVEKDKGATASALSFITHLKKLCNHPYLVYDEFQKPDNRFRN 526


>gi|7509076|pir||T26238 hypothetical protein W06D4.6 - Caenorhabditis
            elegans
          Length = 534

 Score = 1031 bits (2667), Expect = 0.0
 Identities = 513/526 (97%), Positives = 513/526 (97%)
 Frame = +1

Query: 1    MPKKTFENLEDSHGKDVNIPVELPKRKREVTPENLPSTSSTAPTQKRKSLGYSGRTEEPK 180
            MPKKTFENLEDSHGKDVNIPVELPKRKREVTPENLPSTSSTAPTQKRKSLGYSGRTEEPK
Sbjct: 1    MPKKTFENLEDSHGKDVNIPVELPKRKREVTPENLPSTSSTAPTQKRKSLGYSGRTEEPK 60

Query: 181  NIHKTFISPFSTSVSPSKQGLRRRKKALPAIEPPVSVEEASPLRFVNIDVFSRRMASESS 360
            NIHKTFISPFSTSVSPSKQGLRRRKKALPAIEPPVSVEEASPLRFVNIDVFSRRMASESS
Sbjct: 61   NIHKTFISPFSTSVSPSKQGLRRRKKALPAIEPPVSVEEASPLRFVNIDVFSRRMASESS 120

Query: 361  DHDAMIAKLLSRKFSIPMEGYMXXXXXXXXXXXXXKCALFDPYHEGALILYAPEHLSEHA 540
            DHDAMIAKLLSRKFSIPMEGYM             KCALFDPYHEGALILYAPEHLSEHA
Sbjct: 121  DHDAMIAKLLSRKFSIPMEGYMLSGRSLGLGGNRRKCALFDPYHEGALILYAPEHLSEHA 180

Query: 541  QLKEDKDRKVHVVADPVVGKILRPHQRDGVKFMWDCVTGINIPEFHGCIMADEMGLGKTL 720
            QLKEDKDRKVHVVADPVVGKILRPHQRDGVKFMWDCVTGINIPEFHGCIMADEMGLGKTL
Sbjct: 181  QLKEDKDRKVHVVADPVVGKILRPHQRDGVKFMWDCVTGINIPEFHGCIMADEMGLGKTL 240

Query: 721  QCISLLWTLLRQSPDACPTVSKSIIVCPSSLVKNWDKEIKKWLGTRLNAMPVDSGKREQI 900
            QCISLLWTLLRQSPDACPTVSKSIIVCPSSLVKNWDKEIKKWLGTRLNAMPVDSGKREQI
Sbjct: 241  QCISLLWTLLRQSPDACPTVSKSIIVCPSSLVKNWDKEIKKWLGTRLNAMPVDSGKREQI 300

Query: 901  IACLNSFMADSKMRCAIPVLIISYETFRLYANILHSGDVGIVICDEGHRLKNSENLTYQA 1080
            IACLNSFMADSKMRCAIPVLIISYETFRLYANILHSGDVGIVICDEGHRLKNSENLTYQA
Sbjct: 301  IACLNSFMADSKMRCAIPVLIISYETFRLYANILHSGDVGIVICDEGHRLKNSENLTYQA 360

Query: 1081 LSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPGLLGTASEFRKKFENAILKGRDADASS 1260
            LSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPGLLGTASEFRKKFENAILKGRDADASS
Sbjct: 361  LSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPGLLGTASEFRKKFENAILKGRDADASS 420

Query: 1261 EDQKKGEEKTKEMISLVEKCIIRRTSALLTKYLPVKYEHIICCKNSTLQETLYNKLIECE 1440
            EDQKKGEEKTKEMISLVEKCIIRRTSALLTKYLPVKYEHIICCKNSTLQETLYNKLIECE
Sbjct: 421  EDQKKGEEKTKEMISLVEKCIIRRTSALLTKYLPVKYEHIICCKNSTLQETLYNKLIECE 480

Query: 1441 KQNRIVEKDKGATASALSFITHLKKLCNHPYLVYDEFQKPDNRFRN 1578
            KQNRIVEKDKGATASALSFITHLKKLCNHPYLVYDEFQKPDNRFRN
Sbjct: 481  KQNRIVEKDKGATASALSFITHLKKLCNHPYLVYDEFQKPDNRFRN 526


>gi|39589798|emb|CAE67033.1| Hypothetical protein CBG12435
            [Caenorhabditis briggsae]
          Length = 782

 Score =  895 bits (2314), Expect = 0.0
 Identities = 443/491 (90%), Positives = 463/491 (94%), Gaps = 1/491 (0%)
 Frame = +1

Query: 106  PSTSS-TAPTQKRKSLGYSGRTEEPKNIHKTFISPFSTSVSPSKQGLRRRKKALPAIEPP 282
            P+TSS +AP QKR+SLGYS +  EPKNIHK+F+SPFSTSVSP+KQGLRR+KKA PAIEPP
Sbjct: 1    PTTSSASAPAQKRRSLGYSAKATEPKNIHKSFVSPFSTSVSPTKQGLRRKKKAPPAIEPP 60

Query: 283  VSVEEASPLRFVNIDVFSRRMASESSDHDAMIAKLLSRKFSIPMEGYMXXXXXXXXXXXX 462
            VSVE A+P RFVNI+VF+ RMASES DH+AM+AKLLSRKFSIPMEGYM
Sbjct: 61   VSVE-ANPFRFVNINVFNERMASESCDHNAMVAKLLSRKFSIPMEGYMLSGRSLGLGGNR 119

Query: 463  XKCALFDPYHEGALILYAPEHLSEHAQLKEDKDRKVHVVADPVVGKILRPHQRDGVKFMW 642
             KCALFDPYHEGALILYAPE LSEHAQLKEDKDRKVHVVADPVVGKILRPHQRDGVKFMW
Sbjct: 120  RKCALFDPYHEGALILYAPEQLSEHAQLKEDKDRKVHVVADPVVGKILRPHQRDGVKFMW 179

Query: 643  DCVTGINIPEFHGCIMADEMGLGKTLQCISLLWTLLRQSPDACPTVSKSIIVCPSSLVKN 822
            DCVTG+NIPE+HGCIMADEMGLGKTLQCISLLWTLLRQSPDACPTVSKSIIVCPSSLVKN
Sbjct: 180  DCVTGVNIPEYHGCIMADEMGLGKTLQCISLLWTLLRQSPDACPTVSKSIIVCPSSLVKN 239

Query: 823  WDKEIKKWLGTRLNAMPVDSGKREQIIACLNSFMADSKMRCAIPVLIISYETFRLYANIL 1002
            WDKEIKKWLGTRLNAMPVDSGKRE II CLNSFM+DSKMRCAIPVLIISYETFRLYANIL
Sbjct: 240  WDKEIKKWLGTRLNAMPVDSGKRELIIQCLNSFMSDSKMRCAIPVLIISYETFRLYANIL 299

Query: 1003 HSGDVGIVICDEGHRLKNSENLTYQALSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPG 1182
            HSG+VGIVICDEGHRLKNSENLTYQALSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPG
Sbjct: 300  HSGEVGIVICDEGHRLKNSENLTYQALSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPG 359

Query: 1183 LLGTASEFRKKFENAILKGRDADASSEDQKKGEEKTKEMISLVEKCIIRRTSALLTKYLP 1362
            LLGTASEFRKKFENAILKGRDADAS+EDQKKGEEKTKEM+SLVEKCIIRRTSALLTKYLP
Sbjct: 360  LLGTASEFRKKFENAILKGRDADASAEDQKKGEEKTKEMVSLVEKCIIRRTSALLTKYLP 419

Query: 1363 VKYEHIICCKNSTLQETLYNKLIECEKQNRIVEKDKGATASALSFITHLKKLCNHPYLVY 1542
            VKYEHIICCKNSTLQETLYNKLIECEKQNRI EKDKGATASALSFITHLKKLCNHPYLVY
Sbjct: 420  VKYEHIICCKNSTLQETLYNKLIECEKQNRITEKDKGATASALSFITHLKKLCNHPYLVY 479

Query: 1543 DEFQKPDNRFR 1575
            +E QKPDNRFR
Sbjct: 480  EELQKPDNRFR 490




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