Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= W09B6_2
(1413 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17536589|ref|NP_493919.1| TBP-Associated transcription Factor... 928 0.0
gi|7509154|pir||T32410 hypothetical protein W09B6.2 - Caenorhabd... 928 0.0
gi|39586969|emb|CAE62904.1| Hypothetical protein CBG07094 [Caeno... 565 e-159
gi|437333|gb|AAA16536.1| TAFII60 145 2e-33
gi|24666846|ref|NP_524161.2| CG32211-PA [Drosophila melanogaster... 144 5e-33
gi|630879|pir||S42220 transcription initiation factor IID chain ... 144 5e-33
gi|740569|prf||2005369A transcription factor TFIID 143 9e-33
gi|48121254|ref|XP_393233.1| similar to ENSANGP00000013395 [Apis... 137 8e-31
gi|31208413|ref|XP_313173.1| ENSANGP00000013395 [Anopheles gambi... 135 2e-30
gi|21536355|ref|NP_620834.1| TBP-associated factor 6 isoform gam... 132 2e-29
gi|5032147|ref|NP_005632.1| TBP-associated factor 6 isoform alph... 132 2e-29
gi|46250328|gb|AAH68776.1| LOC397724 protein [Xenopus laevis] 129 2e-28
gi|2134164|pir||JC4366 transcription factor IID p80 chain homolo... 129 2e-28
gi|3915901|sp|Q91857|TAF6_XENLA Transcription initiation factor ... 129 2e-28
gi|11991529|emb|CAC19673.1| TAFII70 protein [Pleurodeles waltl] 128 4e-28
gi|6678215|ref|NP_033341.1| TAF6 RNA polymerase II, TATA box bin... 127 5e-28
gi|34871482|ref|XP_213729.2| similar to Transcription initiation... 127 5e-28
gi|47222523|emb|CAG02888.1| unnamed protein product [Tetraodon n... 127 5e-28
gi|1363982|pir||JC4245 transcription factor IID chain - mouse 127 6e-28
gi|21536357|ref|NP_620835.1| TBP-associated factor 6 isoform del... 120 8e-26
gi|25013131|gb|AAN71679.1| SD16013p [Drosophila melanogaster] 109 2e-22
gi|45550693|ref|NP_649547.3| CG10390-PA [Drosophila melanogaster... 108 2e-22
gi|15220358|ref|NP_171987.1| TATA box-binding protein-associated... 82 3e-14
gi|13492644|gb|AAK28288.1| putative TBP-associated 59 kDa subuni... 82 3e-14
gi|19075428|ref|NP_587928.1| transcription initiation factor tfi... 79 3e-13
gi|50287705|ref|XP_446282.1| unnamed protein product [Candida gl... 79 3e-13
gi|50287717|ref|XP_446288.1| unnamed protein product [Candida gl... 78 6e-13
gi|6321326|ref|NP_011403.1| Subunit (60 kDa) of TFIID and SAGA c... 78 6e-13
gi|45198499|ref|NP_985528.1| AFL020Wp [Eremothecium gossypii] >g... 71 7e-11
gi|34914604|ref|NP_918649.1| putative TATA binding protein-assoc... 69 3e-10
gi|49120703|ref|XP_412369.1| hypothetical protein AN8232.2 [Aspe... 69 4e-10
gi|2196466|emb|CAA74021.1| TATA binding protein-associated facto... 68 5e-10
gi|22330245|ref|NP_175838.2| expressed protein [Arabidopsis thal... 66 2e-09
gi|25405719|pir||C96585 hypothetical protein F20D21.18 [imported... 66 2e-09
gi|42495554|gb|AAS17938.1| TATA binding protein associated facto... 66 2e-09
gi|17064762|gb|AAL32535.1| Very similar to TATA binding protein-... 66 2e-09
gi|42495558|gb|AAS17940.1| TATA binding protein associated facto... 66 2e-09
gi|46437770|gb|EAK97111.1| hypothetical protein CaO19.7454 [Cand... 65 5e-09
gi|50423941|ref|XP_460555.1| unnamed protein product [Debaryomyc... 62 4e-08
gi|42495556|gb|AAS17939.1| TATA binding protein associated facto... 61 6e-08
gi|16648300|gb|AAL25415.1| LD25013p [Drosophila melanogaster] 61 7e-08
gi|50807829|ref|XP_428935.1| PREDICTED: similar to TAFII70 prote... 59 3e-07
gi|50311083|ref|XP_455565.1| unnamed protein product [Kluyveromy... 58 6e-07
gi|46132948|ref|XP_389187.1| hypothetical protein FG09011.1 [Gib... 57 8e-07
gi|19074721|ref|NP_586227.1| TRANSCRIPTION INITIATION FACTOR TFI... 57 1e-06
gi|17543084|ref|NP_500397.1| transcription initiation factor tfi... 54 1e-05
gi|39583679|emb|CAE63783.1| Hypothetical protein CBG08324 [Caeno... 45 0.004
gi|38111822|gb|EAA57330.1| hypothetical protein MG08299.4 [Magna... 40 0.10
gi|45190980|ref|NP_985234.1| AER378Wp [Eremothecium gossypii] >g... 39 0.39
gi|34861560|ref|XP_219557.2| similar to RIKEN cDNA C530024J06 [R... 38 0.51
gi|22122597|ref|NP_666204.1| TAF6-like RNA polymerase II, p300/C... 38 0.51
gi|32415970|ref|XP_328463.1| hypothetical protein [Neurospora cr... 38 0.51
gi|15238903|ref|NP_199626.1| phytochrome A signal transduction 1... 37 1.1
gi|26450054|dbj|BAC42147.1| putative SCARECROW gene regulator [A... 37 1.1
gi|47209819|emb|CAF92633.1| unnamed protein product [Tetraodon n... 37 1.1
gi|50731139|ref|XP_417185.1| PREDICTED: similar to SI:bZ1P14.10 ... 37 1.5
gi|49115232|gb|AAH73241.1| Unknown (protein for MGC:80584) [Xeno... 37 1.5
gi|42659576|ref|XP_370651.2| hypothetical protein FLJ32810 [Homo... 36 2.0
gi|5453844|ref|NP_006464.1| TAF6-like RNA polymerase II; p300/CB... 36 2.0
gi|14250642|gb|AAH08785.1| TAF6L protein [Homo sapiens] 36 2.0
gi|34860309|ref|XP_235808.2| similar to oligophrenin 1 [Rattus n... 36 2.0
gi|34391897|gb|AAP43996.1| guanine nucleotide exchange factor [X... 36 2.0
gi|50509234|dbj|BAD30510.1| putative chitin-inducible gibberelli... 35 4.3
gi|15807057|ref|NP_295786.1| polynucleotide phosphorylase [Deino... 35 5.7
gi|34913888|ref|NP_918291.1| B1156H12.28 [Oryza sativa (japonica... 35 5.7
gi|48096459|ref|XP_392462.1| similar to CG18255-PA [Apis mellifera] 34 7.4
gi|47224610|emb|CAG03594.1| unnamed protein product [Tetraodon n... 34 7.4
gi|49074586|ref|XP_401417.1| hypothetical protein UM03802.1 [Ust... 34 7.4
gi|48096455|ref|XP_392460.1| similar to BMKETTIN [Apis mellifera] 34 9.7
gi|48826199|ref|ZP_00287424.1| COG1589: Cell division septal pro... 34 9.7
>gi|17536589|ref|NP_493919.1| TBP-Associated transcription Factor
family member (52.7 kD) (taf-6.1) [Caenorhabditis
elegans]
gi|13624425|gb|AAG00033.2| Taf (tbp-associated transcription factor)
family protein 6.1 [Caenorhabditis elegans]
Length = 470
Score = 928 bits (2399), Expect = 0.0
Identities = 470/470 (100%), Positives = 470/470 (100%)
Frame = +1
Query: 1 MSKTVTIRRPSPTKTSEEPAAHQTPIFTQTAAEMLGITSLNTEAAELLEFLSREKLKEIV 180
MSKTVTIRRPSPTKTSEEPAAHQTPIFTQTAAEMLGITSLNTEAAELLEFLSREKLKEIV
Sbjct: 1 MSKTVTIRRPSPTKTSEEPAAHQTPIFTQTAAEMLGITSLNTEAAELLEFLSREKLKEIV 60
Query: 181 RLSAKWTQKSARRRMAVADVEHAIRSTRQCGGLNISSVDTLNLGIQQLQPIQGTSTGIYS 360
RLSAKWTQKSARRRMAVADVEHAIRSTRQCGGLNISSVDTLNLGIQQLQPIQGTSTGIYS
Sbjct: 61 RLSAKWTQKSARRRMAVADVEHAIRSTRQCGGLNISSVDTLNLGIQQLQPIQGTSTGIYS 120
Query: 361 FLKSSADVDVDKEDTETFIKIPRDLRVISYPLVNEGQPVQSEYTVNVDEDDGNFFEKIVP 540
FLKSSADVDVDKEDTETFIKIPRDLRVISYPLVNEGQPVQSEYTVNVDEDDGNFFEKIVP
Sbjct: 121 FLKSSADVDVDKEDTETFIKIPRDLRVISYPLVNEGQPVQSEYTVNVDEDDGNFFEKIVP 180
Query: 541 EVMTMIPEKNTPSSSTTSSLQMFRDAVKTAKIDQKVGLKPSTIEILTVEQQIFMKDIITV 720
EVMTMIPEKNTPSSSTTSSLQMFRDAVKTAKIDQKVGLKPSTIEILTVEQQIFMKDIITV
Sbjct: 181 EVMTMIPEKNTPSSSTTSSLQMFRDAVKTAKIDQKVGLKPSTIEILTVEQQIFMKDIITV 240
Query: 721 CMGQDDKKRHEALYTLETDAGLQVFLPHLTERICKSISANISQRCLSLIIYAGRVLRSLS 900
CMGQDDKKRHEALYTLETDAGLQVFLPHLTERICKSISANISQRCLSLIIYAGRVLRSLS
Sbjct: 241 CMGQDDKKRHEALYTLETDAGLQVFLPHLTERICKSISANISQRCLSLIIYAGRVLRSLS 300
Query: 901 HNKACDMTVTLHHVLPALLSCCVGRNMCLRPETDNHWALRDFSAKTLVGLVRDQVDKHDA 1080
HNKACDMTVTLHHVLPALLSCCVGRNMCLRPETDNHWALRDFSAKTLVGLVRDQVDKHDA
Sbjct: 301 HNKACDMTVTLHHVLPALLSCCVGRNMCLRPETDNHWALRDFSAKTLVGLVRDQVDKHDA 360
Query: 1081 GRTARRLFDFSHRIFRDTGSSFSMIYGTVHILQEFVAGPKKAAWLLTELGETNARCKSHI 1260
GRTARRLFDFSHRIFRDTGSSFSMIYGTVHILQEFVAGPKKAAWLLTELGETNARCKSHI
Sbjct: 361 GRTARRLFDFSHRIFRDTGSSFSMIYGTVHILQEFVAGPKKAAWLLTELGETNARCKSHI 420
Query: 1261 ESGSRIGASQLSIQEAQKLNQQILKCENSIRNRYNLQQQAPGVPINRRFH 1410
ESGSRIGASQLSIQEAQKLNQQILKCENSIRNRYNLQQQAPGVPINRRFH
Sbjct: 421 ESGSRIGASQLSIQEAQKLNQQILKCENSIRNRYNLQQQAPGVPINRRFH 470
>gi|7509154|pir||T32410 hypothetical protein W09B6.2 - Caenorhabditis
elegans
Length = 707
Score = 928 bits (2399), Expect = 0.0
Identities = 470/470 (100%), Positives = 470/470 (100%)
Frame = +1
Query: 1 MSKTVTIRRPSPTKTSEEPAAHQTPIFTQTAAEMLGITSLNTEAAELLEFLSREKLKEIV 180
MSKTVTIRRPSPTKTSEEPAAHQTPIFTQTAAEMLGITSLNTEAAELLEFLSREKLKEIV
Sbjct: 238 MSKTVTIRRPSPTKTSEEPAAHQTPIFTQTAAEMLGITSLNTEAAELLEFLSREKLKEIV 297
Query: 181 RLSAKWTQKSARRRMAVADVEHAIRSTRQCGGLNISSVDTLNLGIQQLQPIQGTSTGIYS 360
RLSAKWTQKSARRRMAVADVEHAIRSTRQCGGLNISSVDTLNLGIQQLQPIQGTSTGIYS
Sbjct: 298 RLSAKWTQKSARRRMAVADVEHAIRSTRQCGGLNISSVDTLNLGIQQLQPIQGTSTGIYS 357
Query: 361 FLKSSADVDVDKEDTETFIKIPRDLRVISYPLVNEGQPVQSEYTVNVDEDDGNFFEKIVP 540
FLKSSADVDVDKEDTETFIKIPRDLRVISYPLVNEGQPVQSEYTVNVDEDDGNFFEKIVP
Sbjct: 358 FLKSSADVDVDKEDTETFIKIPRDLRVISYPLVNEGQPVQSEYTVNVDEDDGNFFEKIVP 417
Query: 541 EVMTMIPEKNTPSSSTTSSLQMFRDAVKTAKIDQKVGLKPSTIEILTVEQQIFMKDIITV 720
EVMTMIPEKNTPSSSTTSSLQMFRDAVKTAKIDQKVGLKPSTIEILTVEQQIFMKDIITV
Sbjct: 418 EVMTMIPEKNTPSSSTTSSLQMFRDAVKTAKIDQKVGLKPSTIEILTVEQQIFMKDIITV 477
Query: 721 CMGQDDKKRHEALYTLETDAGLQVFLPHLTERICKSISANISQRCLSLIIYAGRVLRSLS 900
CMGQDDKKRHEALYTLETDAGLQVFLPHLTERICKSISANISQRCLSLIIYAGRVLRSLS
Sbjct: 478 CMGQDDKKRHEALYTLETDAGLQVFLPHLTERICKSISANISQRCLSLIIYAGRVLRSLS 537
Query: 901 HNKACDMTVTLHHVLPALLSCCVGRNMCLRPETDNHWALRDFSAKTLVGLVRDQVDKHDA 1080
HNKACDMTVTLHHVLPALLSCCVGRNMCLRPETDNHWALRDFSAKTLVGLVRDQVDKHDA
Sbjct: 538 HNKACDMTVTLHHVLPALLSCCVGRNMCLRPETDNHWALRDFSAKTLVGLVRDQVDKHDA 597
Query: 1081 GRTARRLFDFSHRIFRDTGSSFSMIYGTVHILQEFVAGPKKAAWLLTELGETNARCKSHI 1260
GRTARRLFDFSHRIFRDTGSSFSMIYGTVHILQEFVAGPKKAAWLLTELGETNARCKSHI
Sbjct: 598 GRTARRLFDFSHRIFRDTGSSFSMIYGTVHILQEFVAGPKKAAWLLTELGETNARCKSHI 657
Query: 1261 ESGSRIGASQLSIQEAQKLNQQILKCENSIRNRYNLQQQAPGVPINRRFH 1410
ESGSRIGASQLSIQEAQKLNQQILKCENSIRNRYNLQQQAPGVPINRRFH
Sbjct: 658 ESGSRIGASQLSIQEAQKLNQQILKCENSIRNRYNLQQQAPGVPINRRFH 707