Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= Y106G6H_1
         (1362 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17510877|ref|NP_492726.1| putative protein, with ER retention...   838   0.0
gi|39580769|emb|CAE58938.1| Hypothetical protein CBG02206 [Caeno...   709   0.0
gi|12804473|gb|AAH01644.1| NLN protein [Homo sapiens] >gnl|BL_OR...    35   3.2
gi|169211|gb|AAA33708.1| ethylene-forming enzyme >gnl|BL_ORD_ID|...    35   3.2
gi|19209|emb|CAA28479.1| unnamed protein product [Lycopersicon e...    35   4.2
gi|119181|sp|P24157|ACC4_LYCES 1-aminocyclopropane-1-carboxylate...    35   4.2
gi|398992|sp|P05116|ACC1_LYCES 1-aminocyclopropane-1-carboxylate...    35   4.2


>gi|17510877|ref|NP_492726.1| putative protein, with ER retention
            signal (51.6 kD) (1L7) [Caenorhabditis elegans]
 gi|6580267|emb|CAB63336.1| Hypothetical protein Y106G6H.1
            [Caenorhabditis elegans]
          Length = 453

 Score =  838 bits (2164), Expect = 0.0
 Identities = 406/453 (89%), Positives = 406/453 (89%)
 Frame = +1

Query: 1    MNFELILVSLATCILSVNADFHEECRQSLRDGRLRIETVAETLASREIDRLVSLMSNSKD 180
            MNFELILVSLATCILSVNADFHEECRQSLRDGRLRIETVAETLASREIDRLVSLMSNSKD
Sbjct: 1    MNFELILVSLATCILSVNADFHEECRQSLRDGRLRIETVAETLASREIDRLVSLMSNSKD 60

Query: 181  QIKGYNAEKLNYSPKLQDLIKIRDDQPPCPQPNATMFXXXXXXXXXXXXXXXXXXXXXXX 360
            QIKGYNAEKLNYSPKLQDLIKIRDDQPPCPQPNATMF
Sbjct: 61   QIKGYNAEKLNYSPKLQDLIKIRDDQPPCPQPNATMFTTPTTPAAPTTTADPTTVADDTT 120

Query: 361  XXXXXXXXXXXXXXXXXXXXXXXXKISDKKKRFSPSKVYVTKTKDMDPFSWYMKTLHYYM 540
                                    KISDKKKRFSPSKVYVTKTKDMDPFSWYMKTLHYYM
Sbjct: 121  TAGATDSSTSGASDAPSSTPPPPPKISDKKKRFSPSKVYVTKTKDMDPFSWYMKTLHYYM 180

Query: 541  KRESEVCNNQITDLNSITEDQLFGYFSTLATAHPGPFCSLCHRFAEEIHSKVLKPNSLLI 720
            KRESEVCNNQITDLNSITEDQLFGYFSTLATAHPGPFCSLCHRFAEEIHSKVLKPNSLLI
Sbjct: 181  KRESEVCNNQITDLNSITEDQLFGYFSTLATAHPGPFCSLCHRFAEEIHSKVLKPNSLLI 240

Query: 721  TDDEYHISHLLYNHFPKPKAICTAIAPGCDDDYAARVLNLTESVVCLECTACMSITNVLQ 900
            TDDEYHISHLLYNHFPKPKAICTAIAPGCDDDYAARVLNLTESVVCLECTACMSITNVLQ
Sbjct: 241  TDDEYHISHLLYNHFPKPKAICTAIAPGCDDDYAARVLNLTESVVCLECTACMSITNVLQ 300

Query: 901  HKIFLQPAMLDQTYYWLRGNLFHNLCAELCLAFQGLDIPLFPHGFTYDGCQNVMKKKFYQ 1080
            HKIFLQPAMLDQTYYWLRGNLFHNLCAELCLAFQGLDIPLFPHGFTYDGCQNVMKKKFYQ
Sbjct: 301  HKIFLQPAMLDQTYYWLRGNLFHNLCAELCLAFQGLDIPLFPHGFTYDGCQNVMKKKFYQ 360

Query: 1081 LIDVATVITRPERFCSLELQWCELNEQPNALHCLRELCQEYFKDTPQTRWLCSQIPDRPE 1260
            LIDVATVITRPERFCSLELQWCELNEQPNALHCLRELCQEYFKDTPQTRWLCSQIPDRPE
Sbjct: 361  LIDVATVITRPERFCSLELQWCELNEQPNALHCLRELCQEYFKDTPQTRWLCSQIPDRPE 420

Query: 1261 QADAFLNIRQTKVKKEKKDYHMEFEKRNLHDEL 1359
            QADAFLNIRQTKVKKEKKDYHMEFEKRNLHDEL
Sbjct: 421  QADAFLNIRQTKVKKEKKDYHMEFEKRNLHDEL 453


>gi|39580769|emb|CAE58938.1| Hypothetical protein CBG02206
            [Caenorhabditis briggsae]
          Length = 465

 Score =  709 bits (1831), Expect = 0.0
 Identities = 341/464 (73%), Positives = 368/464 (78%), Gaps = 14/464 (3%)
 Frame = +1

Query: 10   ELILVSLATCILSVNADFHEECRQSLRDGRLRIETVAETLASREIDRLVSLMSNSKDQIK 189
            + IL  LA   L  NA FHEEC+Q+LRD RLRIETVA+ LASREIDRLVSLM+ SKD++K
Sbjct: 2    QFILAVLAATALLANAGFHEECQQTLRDSRLRIETVADVLASREIDRLVSLMTKSKDRMK 61

Query: 190  GYN-AEKLNYSPKLQDLIKIRDDQPPCPQPNATMFXXXXXXXXXXXXXXXXXXXXXXXXX 366
             Y   E  ++SPKLQDLIKI+DDQPPCPQPNATMF
Sbjct: 62   SYQPIEGFSFSPKLQDLIKIKDDQPPCPQPNATMFTTSTRSTTTNIPTTAAPSTAPSDST 121

Query: 367  XXXXXXXXXXXXXXXXXXXXXXKISDK-------------KKRFSPSKVYVTKTKDMDPF 507
                                    S               KK+F+P  VYVT+TKD DPF
Sbjct: 122  TDGNTGSTQNSSPATAGSTSSGLPSTNAPEETLQKEKRTTKKKFNPKNVYVTRTKDQDPF 181

Query: 508  SWYMKTLHYYMKRESEVCNNQITDLNSITEDQLFGYFSTLATAHPGPFCSLCHRFAEEIH 687
            +WYMKTLHYYMKRESEVCNNQI+D NSITEDQLFGYFSTLA AHPGPFCSLCHRF EEIH
Sbjct: 182  AWYMKTLHYYMKRESEVCNNQISDFNSITEDQLFGYFSTLAAAHPGPFCSLCHRFTEEIH 241

Query: 688  SKVLKPNSLLITDDEYHISHLLYNHFPKPKAICTAIAPGCDDDYAARVLNLTESVVCLEC 867
            S+VLKPNSLLITDDEYHISHLLYNH P PK++CTAIAPGCD+DYA +V NLTESVVCLEC
Sbjct: 242  SRVLKPNSLLITDDEYHISHLLYNHIPSPKSLCTAIAPGCDEDYAIKVGNLTESVVCLEC 301

Query: 868  TACMSITNVLQHKIFLQPAMLDQTYYWLRGNLFHNLCAELCLAFQGLDIPLFPHGFTYDG 1047
            TACMSITNVLQHKIFLQPAMLD+ YYWLRGNLFHNLCAELCLAFQGL+I LFP GFTYDG
Sbjct: 302  TACMSITNVLQHKIFLQPAMLDKVYYWLRGNLFHNLCAELCLAFQGLNITLFPRGFTYDG 361

Query: 1048 CQNVMKKKFYQLIDVATVITRPERFCSLELQWCELNEQPNALHCLRELCQEYFKDTPQTR 1227
            CQNVMKKKFYQ+IDVATVITRPERFCSLE+QWCELNEQPNALHCLRE+CQEYFKDTPQTR
Sbjct: 362  CQNVMKKKFYQIIDVATVITRPERFCSLEIQWCELNEQPNALHCLREMCQEYFKDTPQTR 421

Query: 1228 WLCSQIPDRPEQADAFLNIRQTKVKKEKKDYHMEFEKRNLHDEL 1359
            WLCSQIPDRPEQADAFLNIRQTKVKKEKK+YH+ FEKRNLHDEL
Sbjct: 422  WLCSQIPDRPEQADAFLNIRQTKVKKEKKEYHVNFEKRNLHDEL 465




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