Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= Y110A2AL_5
(4176 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17537719|ref|NP_494383.1| patched family member (ptc-3) [Caen... 2665 0.0
gi|17537717|ref|NP_494384.1| patched family member (ptc-3) [Caen... 2654 0.0
gi|39584667|emb|CAE72420.1| Hypothetical protein CBG19582 [Caeno... 2315 0.0
gi|39597594|emb|CAE59824.1| Hypothetical protein CBG03294 [Caeno... 1130 0.0
gi|17535373|ref|NP_495662.1| patched family member (ptc-1) [Caen... 1125 0.0
gi|17535375|ref|NP_495218.1| patched family member (ptc-2) [Caen... 565 e-159
gi|47506910|gb|AAH70995.1| Unknown (protein for MGC:79874) [Xeno... 520 e-146
gi|11463863|dbj|BAB18575.1| patched-2 [Xenopus laevis] 520 e-145
gi|48139426|ref|XP_397007.1| similar to putative hedgehog recept... 499 e-139
gi|4588015|gb|AAD25953.1| patched 2 [Homo sapiens] 471 e-131
gi|4325111|gb|AAD17260.1| patched 2 [Homo sapiens] 469 e-130
gi|3929235|gb|AAC79847.1| receptor protein patched 2 [Homo sapie... 469 e-130
gi|22538486|ref|NP_003729.2| patched 2; patched (Drosophila) hom... 469 e-130
gi|12643356|sp|Q9Y6C5|PTC2_HUMAN Patched protein homolog 2 (PTC2... 469 e-130
gi|37182233|gb|AAQ88919.1| Patched 2 [Homo sapiens] 469 e-130
gi|6679517|ref|NP_032984.1| patched homolog 2 [Mus musculus] >gn... 463 e-128
gi|4883640|gb|AAD31595.1| putative hedgehog receptor [Junonia co... 461 e-128
gi|24586628|ref|NP_523661.2| CG2411-PA [Drosophila melanogaster]... 427 e-117
gi|552099|gb|AAA28696.1| membrane protein 426 e-117
gi|85054|pir||S06119 membrane protein patched - fruit fly (Droso... 417 e-115
gi|226505|prf||1515355A patched gene 416 e-114
gi|4539024|emb|CAB39726.1| patched-2 protein [Danio rerio] 347 1e-93
gi|39930495|ref|NP_446018.1| patched (Drosophila) homolog [Rattu... 347 2e-93
gi|6679519|ref|NP_032983.1| patched; Patched 1; mesenchymal dysp... 344 9e-93
gi|4506247|ref|NP_000255.1| patched; patched (Drosophila) homolo... 343 3e-92
gi|13434992|dbj|BAB18574.2| patched-1 [Xenopus laevis] 340 2e-91
gi|13194564|gb|AAK15463.1| patched-1 [Xenopus laevis] 340 2e-91
gi|45384440|ref|NP_990291.1| patched protein [Gallus gallus] >gn... 339 4e-91
gi|1335864|gb|AAC50496.1| patched gene homolog; similar to Droso... 337 1e-90
gi|18859285|ref|NP_571063.1| patched1; etID309849.2 [Danio rerio... 316 3e-84
gi|47228251|emb|CAG07646.1| unnamed protein product [Tetraodon n... 315 8e-84
gi|15426026|gb|AAK97655.1| patched 2 [Gallus gallus] 276 3e-72
gi|34873568|ref|XP_214413.2| similar to patched [Rattus norvegicus] 276 4e-72
gi|31227677|ref|XP_317925.1| ENSANGP00000011383 [Anopheles gambi... 276 4e-72
gi|47212609|emb|CAF93285.1| unnamed protein product [Tetraodon n... 274 1e-71
gi|50751494|ref|XP_422426.1| PREDICTED: similar to patched 2 [Ga... 211 1e-52
gi|38489135|gb|AAR21239.1| patched [Homo sapiens] 189 5e-46
gi|4092050|gb|AAC99398.1| patched [Rattus norvegicus] 187 2e-45
gi|6694422|gb|AAF25228.1| NPC1 protein [Dictyostelium discoideum... 159 4e-37
gi|34870361|ref|XP_345571.1| similar to putative twelve transmem... 158 1e-36
gi|31223553|ref|XP_317322.1| ENSANGP00000010415 [Anopheles gambi... 147 3e-33
gi|50258193|gb|EAL20887.1| hypothetical protein CNBE2480 [Crypto... 139 6e-31
gi|49069812|ref|XP_399195.1| hypothetical protein UM01580.1 [Ust... 132 5e-29
gi|49088982|ref|XP_406256.1| hypothetical protein AN2119.2 [Aspe... 129 6e-28
gi|21105763|gb|AAM34780.1| patched [Equus caballus] 114 3e-23
gi|47198640|emb|CAG14178.1| unnamed protein product [Tetraodon n... 109 6e-22
gi|38489136|gb|AAR21240.1| patched [Homo sapiens] 109 6e-22
gi|39580224|emb|CAE72980.1| Hypothetical protein CBG20322 [Caeno... 105 7e-21
gi|12034662|gb|AAG45954.1| patched-1 [Xenopus laevis] 103 4e-20
gi|28175594|gb|AAH43542.1| Unknown (protein for IMAGE:5170834) [... 102 1e-19
gi|47228003|emb|CAF97632.1| unnamed protein product [Tetraodon n... 101 1e-19
gi|47523702|ref|NP_999487.1| Niemann-Pick C disease protein [Sus... 100 2e-19
gi|20531740|gb|AAM27450.1| mutant Niemann-Pick C1 [Felis catus] 100 3e-19
gi|20531742|gb|AAM27451.1| Niemann-Pick C1 [Felis catus] 100 3e-19
gi|8099648|gb|AAF72187.1| Niemann-Pick type C1 disease protein; ... 100 3e-19
gi|50732655|ref|XP_425978.1| PREDICTED: similar to CG11212-PA [G... 100 5e-19
gi|47223010|emb|CAG07097.1| unnamed protein product [Tetraodon n... 99 7e-19
gi|50737130|ref|XP_419162.1| PREDICTED: similar to Niemann-Pick ... 99 1e-18
gi|4557803|ref|NP_000262.1| Niemann-Pick disease, type C1 [Homo ... 99 1e-18
gi|38649260|gb|AAH63302.1| Niemann-Pick disease, type C1 [Homo s... 99 1e-18
gi|7497280|pir||T28706 hypothetical protein C41D7.2 - Caenorhabd... 98 2e-18
gi|17535381|ref|NP_493718.1| PaTched Related (ptr-3) [Caenorhabd... 98 2e-18
gi|27807461|ref|NP_777183.1| Niemann-Pick disease, type C1 [Bos ... 98 2e-18
gi|39596845|emb|CAE59072.1| Hypothetical protein CBG02358 [Caeno... 97 3e-18
gi|17535383|ref|NP_494986.1| PaTched Related (ptr-6) [Caenorhabd... 97 4e-18
gi|31203089|ref|XP_310493.1| ENSANGP00000007352 [Anopheles gambi... 96 6e-18
gi|6581072|gb|AAF18444.1| Niemann-Pick type C1 disease protein [... 96 7e-18
gi|24583258|ref|NP_609357.2| CG5722-PA [Drosophila melanogaster]... 96 7e-18
gi|33589358|gb|AAQ22446.1| RE56428p [Drosophila melanogaster] 96 7e-18
gi|5921280|emb|CAB56505.1| NPC1 protein [Drosophila melanogaster] 96 7e-18
gi|12322632|gb|AAG51318.1| unknown protein, 5' partial [Arabidop... 96 1e-17
gi|11878263|gb|AAG40873.1| Niemann-Pick type C1 disease protein ... 95 1e-17
gi|30851359|gb|AAH52437.1| Niemann Pick type C1 [Mus musculus] >... 95 1e-17
gi|6679104|ref|NP_032746.1| Niemann Pick type C1; sphingomyelino... 95 1e-17
gi|48140454|ref|XP_397117.1| similar to CG11212-PA [Apis mellifera] 95 2e-17
gi|24643595|ref|NP_608417.1| CG12092-PA [Drosophila melanogaster... 94 4e-17
gi|6225893|sp|O42334|PTC2_CYNPY Patched protein homolog 2 (PTC2)... 93 5e-17
gi|38345936|emb|CAD41413.2| OSJNBb0078D11.11 [Oryza sativa (japo... 93 5e-17
gi|45550365|ref|NP_610209.2| CG11212-PA [Drosophila melanogaster... 93 5e-17
gi|6934272|gb|AAF31692.1| Niemann-Pick type C1 protein [Cricetul... 93 6e-17
gi|17508515|ref|NP_491221.1| PaTched Related (104.4 kD) (ptr-2) ... 93 6e-17
gi|39594547|emb|CAE72125.1| Hypothetical protein CBG19221 [Caeno... 92 1e-16
gi|17562808|ref|NP_505380.1| PaTched Related (ptr-1) [Caenorhabd... 91 2e-16
gi|17508519|ref|NP_490687.1| PaTched Related (90.7 kD) (ptr-11) ... 90 4e-16
gi|48096803|ref|XP_392524.1| similar to ENSANGP00000010415 [Apis... 90 4e-16
gi|46227691|gb|EAK88611.1| putative patched family protein with ... 89 7e-16
gi|17569155|ref|NP_510472.1| abnormal DAuer Formation DAF-6, PaT... 89 1e-15
gi|39596623|emb|CAE63242.1| Hypothetical protein CBG07607 [Caeno... 89 1e-15
gi|39585870|emb|CAE61284.1| Hypothetical protein CBG05104 [Caeno... 87 3e-15
gi|32405592|ref|XP_323409.1| hypothetical protein [Neurospora cr... 87 4e-15
gi|50300485|ref|NP_001002025.1| NPC1 (Niemann-Pick disease, type... 87 4e-15
gi|7485950|pir||T05663 hypothetical protein F22I13.120 - Arabido... 86 6e-15
gi|42567506|ref|NP_195548.2| patched family protein [Arabidopsis... 86 1e-14
gi|39586255|emb|CAE66666.1| Hypothetical protein CBG12004 [Caeno... 85 1e-14
gi|20857246|ref|XP_137497.1| similar to NPC1 (Niemann-Pick disea... 85 1e-14
gi|46402233|ref|NP_997125.1| NPC1 (Niemann-Pick disease, type C1... 85 1e-14
gi|32698450|emb|CAA22312.2| Hypothetical protein Y18D10A.7 [Caen... 85 2e-14
gi|17508523|ref|NP_493245.1| PaTched Related (ptr-17) [Caenorhab... 85 2e-14
gi|7019469|ref|NP_037521.1| NPC1 (Niemann-Pick disease, type C1,... 84 2e-14
gi|41350387|gb|AAR97886.1| Niemann-Pick C1-like 1 [Homo sapiens]... 84 2e-14
gi|12853786|dbj|BAB29848.1| unnamed protein product [Mus musculus] 84 4e-14
gi|38092633|ref|XP_109751.2| RIKEN cDNA 4930451E13 [Mus musculus] 84 4e-14
gi|31205209|ref|XP_311553.1| ENSANGP00000010114 [Anopheles gambi... 83 5e-14
gi|50420269|ref|XP_458667.1| unnamed protein product [Debaryomyc... 83 5e-14
gi|47210139|emb|CAF91283.1| unnamed protein product [Tetraodon n... 83 5e-14
gi|23613434|ref|NP_703278.1| patched family protein, putative [P... 83 5e-14
gi|39592388|emb|CAE63465.1| Hypothetical protein CBG07932 [Caeno... 82 1e-13
gi|6225891|sp|O42335|PTC1_CYNPY Patched protein homolog 1 (PTC1)... 82 1e-13
gi|38102306|gb|EAA49161.1| hypothetical protein MG00819.4 [Magna... 82 1e-13
gi|31242457|ref|XP_321659.1| ENSANGP00000011713 [Anopheles gambi... 81 2e-13
gi|46134229|ref|XP_389430.1| hypothetical protein FG09254.1 [Gib... 80 3e-13
gi|50549181|ref|XP_502061.1| hypothetical protein [Yarrowia lipo... 80 4e-13
gi|39598248|emb|CAE68940.1| Hypothetical protein CBG14920 [Caeno... 80 5e-13
gi|42562545|ref|NP_174975.2| patched family protein [Arabidopsis... 80 5e-13
gi|39596050|emb|CAE69686.1| Hypothetical protein CBG15941 [Caeno... 80 5e-13
gi|7504317|pir||T29590 hypothetical protein F55F8.1 - Caenorhabd... 79 9e-13
gi|50058060|gb|AAB37812.3| Patched related family protein 10 [Ca... 79 9e-13
gi|17508517|ref|NP_491658.1| PaTched Related (ptr-10) [Caenorhab... 79 9e-13
gi|39591824|emb|CAE71402.1| Hypothetical protein CBG18310 [Caeno... 79 1e-12
gi|6841051|gb|AAF28875.1| Niemann-Pick C1 disease protein [Homo ... 78 2e-12
gi|17554416|ref|NP_499380.1| PaTched Related (ptr-19) [Caenorhab... 78 2e-12
gi|6325251|ref|NP_015319.1| A transmembrane glycoprotein that is... 77 5e-12
gi|48094409|ref|XP_394168.1| similar to ENSANGP00000011713 [Apis... 76 6e-12
gi|39588499|emb|CAE58022.1| Hypothetical protein CBG01094 [Caeno... 76 6e-12
gi|7497872|pir||T25657 hypothetical protein C53C11.3 - Caenorhab... 76 6e-12
gi|50293501|ref|XP_449162.1| unnamed protein product [Candida gl... 76 8e-12
gi|25147623|ref|NP_510810.2| PaTched Related (ptr-5) [Caenorhabd... 75 1e-11
gi|31746661|gb|AAB42308.4| Patched related family protein 5 [Cae... 75 1e-11
gi|38422462|emb|CAA21636.2| Hypothetical protein Y38F1A.3 [Caeno... 75 2e-11
gi|17535389|ref|NP_496761.1| PaTched Related (90.8 kD) (ptr-18) ... 75 2e-11
gi|17562812|ref|NP_503388.1| PaTched Related (ptr-16) [Caenorhab... 74 2e-11
gi|41149372|ref|XP_370541.1| similar to PaTched Related (104.4 k... 74 3e-11
gi|17562814|ref|NP_507690.1| PaTched Related (ptr-22) [Caenorhab... 73 7e-11
gi|34532356|dbj|BAC86399.1| unnamed protein product [Homo sapiens] 72 1e-10
gi|39597175|emb|CAE59402.1| Hypothetical protein CBG02766 [Caeno... 72 1e-10
gi|48094777|ref|XP_394262.1| similar to ENSANGP00000011713 [Apis... 72 1e-10
gi|39581855|emb|CAE60748.1| Hypothetical protein CBG04434 [Caeno... 71 3e-10
gi|39586853|emb|CAE62788.1| Hypothetical protein CBG06961 [Caeno... 70 3e-10
gi|17562810|ref|NP_504760.1| PaTched Related (ptr-15) [Caenorhab... 69 7e-10
gi|17541728|ref|NP_501963.1| PaTched Related (ptr-14) [Caenorhab... 69 7e-10
gi|17508527|ref|NP_493603.1| PaTched Related (111.8 kD) (ptr-23)... 68 2e-09
gi|23478744|gb|EAA15748.1| Drosophila melanogaster CG11212 gene ... 68 2e-09
gi|17533389|ref|NP_495217.1| predicted CDS, putative cytoplasmic... 67 3e-09
gi|25147620|ref|NP_509013.2| PaTched Related (110.8 kD) (ptr-4) ... 67 4e-09
gi|39597497|emb|CAE59727.1| Hypothetical protein CBG03163 [Caeno... 66 8e-09
gi|17535391|ref|NP_497114.1| PaTched Related (ptr-20) [Caenorhab... 66 8e-09
gi|46436645|gb|EAK96004.1| hypothetical protein CaO19.7242 [Cand... 66 8e-09
gi|17535387|ref|NP_496392.1| PaTched Related (ptr-13) [Caenorhab... 65 1e-08
gi|39597328|emb|CAE59556.1| Hypothetical protein CBG02953 [Caeno... 65 2e-08
gi|39598167|emb|CAE68859.1| Hypothetical protein CBG14821 [Caeno... 64 2e-08
gi|39594536|emb|CAE72114.1| Hypothetical protein CBG19208 [Caeno... 64 4e-08
gi|39594397|emb|CAE71975.1| Hypothetical protein CBG19049 [Caeno... 64 4e-08
gi|45201088|ref|NP_986658.1| AGL008Wp [Eremothecium gossypii] >g... 63 5e-08
gi|50312503|ref|XP_456287.1| unnamed protein product [Kluyveromy... 62 9e-08
gi|39584430|emb|CAE72568.1| Hypothetical protein CBG19753 [Caeno... 62 1e-07
gi|39594070|emb|CAE70180.1| Hypothetical protein CBG16653 [Caeno... 61 3e-07
gi|39597909|emb|CAE68601.1| Hypothetical protein CBG14473 [Caeno... 60 3e-07
gi|17569119|ref|NP_508771.1| Niemann-Pick (human disease) type C... 60 6e-07
gi|7498484|pir||T15961 hypothetical protein F02E8.6 - Caenorhabd... 60 6e-07
gi|39585014|emb|CAE62665.1| Hypothetical protein CBG06803 [Caeno... 59 8e-07
gi|42525985|ref|NP_971083.1| membrane protein, putative [Trepone... 59 1e-06
gi|17508525|ref|NP_490751.1| PaTched Related (ptr-21) [Caenorhab... 59 1e-06
gi|39585878|emb|CAE61292.1| Hypothetical protein CBG05116 [Caeno... 58 2e-06
gi|39595501|emb|CAE60539.1| Hypothetical protein CBG04166 [Caeno... 58 2e-06
gi|48060436|gb|AAF39911.3| Patched related family protein 12 [Ca... 58 2e-06
gi|25143167|ref|NP_491005.2| PaTched Related (ptr-12) [Caenorhab... 58 2e-06
gi|17554358|ref|NP_498813.1| Niemann-Pick (human disease) type C... 57 4e-06
gi|46228654|gb|EAK89524.1| niemann-Pick type C1 disease protein/... 57 5e-06
gi|630596|pir||S44795 F09G8.3 protein - Caenorhabditis elegans 56 6e-06
gi|28804827|dbj|BAC57975.1| patched [Paralichthys olivaceus] 56 8e-06
gi|17535385|ref|NP_496343.1| PaTched Related (ptr-8) [Caenorhabd... 56 8e-06
gi|39591183|emb|CAE73236.1| Hypothetical protein CBG20645 [Caeno... 55 1e-05
gi|17368397|sp|P97260|SCAP_CRIGR Sterol regulatory element bindi... 54 3e-05
gi|6691199|gb|AAF24537.1| F7F22.1 [Arabidopsis thaliana] 54 3e-05
gi|49257414|gb|AAH72950.1| Unknown (protein for IMAGE:4888068) [... 53 7e-05
gi|50510409|dbj|BAD32190.1| mKIAA0199 protein [Mus musculus] 53 7e-05
gi|47564088|ref|NP_001001144.1| SREBP cleavage activating protei... 53 7e-05
gi|23593606|ref|XP_135190.2| similar to SREBP cleavage activatin... 53 7e-05
gi|50776258|ref|XP_427309.1| PREDICTED: similar to patched 2, pa... 53 7e-05
gi|15644049|ref|NP_229098.1| conserved hypothetical protein [The... 52 9e-05
gi|48854362|ref|ZP_00308525.1| COG1033: Predicted exporters of t... 52 9e-05
gi|34189617|gb|AAH27207.1| SCAP protein [Homo sapiens] 52 1e-04
gi|30923298|sp|Q12770|SCAP_HUMAN Sterol regulatory element bindi... 52 1e-04
gi|42528204|ref|NP_973302.1| membrane protein, putative [Trepone... 52 1e-04
gi|20521844|dbj|BAA12111.2| the KIAA0199 gene is expressed ubiqu... 52 1e-04
gi|49071804|ref|XP_400191.1| hypothetical protein UM02576.1 [Ust... 52 2e-04
gi|34866374|ref|XP_217279.2| similar to SREBP cleavage activatin... 52 2e-04
gi|31200733|ref|XP_309314.1| ENSANGP00000018415 [Anopheles gambi... 52 2e-04
gi|8037588|gb|AAF71402.1| TRA-2A [Caenorhabditis remanei] 52 2e-04
gi|17554414|ref|NP_499030.1| PaTched Related (ptr-9) [Caenorhabd... 51 3e-04
gi|15792696|ref|NP_282519.1| putative integral membrane protein ... 50 4e-04
gi|2499021|sp|Q17307|TRA2_CAEBR SEX-DETERMINING TRANSFORMER PROT... 50 6e-04
gi|39590265|emb|CAE66003.1| Hypothetical protein CBG11194 [Caeno... 50 6e-04
gi|50759451|ref|XP_417651.1| PREDICTED: similar to KIAA1337 prot... 49 8e-04
gi|38079042|ref|XP_144125.3| similar to hypothetical protein [Mu... 49 0.001
gi|15669757|ref|NP_248570.1| M. jannaschii predicted coding regi... 49 0.001
gi|48140791|ref|XP_397156.1| similar to CG11212-PA [Apis mellifera] 49 0.001
gi|7206596|gb|AAF39756.1| Transformer : xx animals transformed i... 49 0.001
gi|48861733|ref|ZP_00315633.1| COG1033: Predicted exporters of t... 49 0.001
gi|17536595|ref|NP_495426.1| membrane protein mediating cell com... 49 0.001
gi|48733450|ref|ZP_00267193.1| COG1033: Predicted exporters of t... 48 0.002
gi|28573975|ref|NP_788277.1| CG33131-PA [Drosophila melanogaster... 48 0.002
gi|20378357|gb|AAM20923.1| ER-golgi escort protein [Drosophila m... 48 0.002
gi|49117492|gb|AAH72569.1| Unknown (protein for MGC:99434) [Mus ... 47 0.003
gi|47124351|gb|AAH70441.1| RIKEN cDNA G630052C06 gene [Mus muscu... 47 0.003
gi|34872467|ref|XP_233671.2| similar to KIAA1337 protein [Rattus... 47 0.003
gi|50510889|dbj|BAD32430.1| mKIAA1337 protein [Mus musculus] 47 0.003
gi|28870932|ref|NP_793551.1| membrane protein, putative [Pseudom... 47 0.004
gi|6643038|gb|AAF20397.1| truncated Niemann-Pick C1-like protein... 46 0.007
gi|33620877|gb|AAG24025.2| Dispatched family protein 2 [Caenorha... 46 0.007
gi|17562806|ref|NP_505396.1| disPaTchED family member (ptd-2) [C... 46 0.007
gi|30314823|emb|CAD70191.1| hypothetical protein [Pseudomonas sy... 46 0.009
gi|28900326|ref|NP_799981.1| putative multidrug efflux membrane ... 46 0.009
gi|39594563|emb|CAE72141.1| Hypothetical protein CBG19239 [Caeno... 45 0.011
gi|5834578|emb|CAB55303.1| hypothetical protein [Homo sapiens] 45 0.015
gi|17508513|ref|NP_491673.1| disPaTchED family member, sterol-se... 45 0.015
gi|31208109|ref|XP_313021.1| ENSANGP00000011300 [Anopheles gambi... 45 0.015
gi|7504454|pir||T33156 hypothetical protein F56H1.1 - Caenorhabd... 45 0.015
gi|7243055|dbj|BAA92575.1| KIAA1337 protein [Homo sapiens] 45 0.015
gi|42655636|ref|XP_052561.5| KIAA1337 protein [Homo sapiens] 45 0.015
gi|50740212|ref|XP_419396.1| PREDICTED: similar to dispatched A ... 45 0.019
gi|26988744|ref|NP_744169.1| membrane protein, putative [Pseudom... 45 0.019
gi|29345715|ref|NP_809218.1| putative aminoglycoside efflux pump... 45 0.019
gi|15607343|ref|NP_214716.1| mmpL11 [Mycobacterium tuberculosis ... 45 0.019
gi|23469211|ref|ZP_00124546.1| COG1033: Predicted exporters of t... 44 0.025
gi|48731390|ref|ZP_00265135.1| COG1033: Predicted exporters of t... 44 0.043
gi|38489134|gb|AAR21238.1| patched [Homo sapiens] 44 0.043
gi|47086441|ref|NP_997965.1| dispatched homolog 1 [Danio rerio] ... 43 0.056
gi|15594597|ref|NP_212386.1| conserved hypothetical integral mem... 43 0.056
gi|45358585|ref|NP_988142.1| conserved hypothetical protein [Met... 43 0.056
gi|46314765|ref|ZP_00215350.1| COG1033: Predicted exporters of t... 43 0.073
gi|46916735|emb|CAG23498.1| putative multidrug efflux RND transp... 42 0.096
gi|27695402|gb|AAH43102.1| Disp1-pending protein [Mus musculus] ... 42 0.096
gi|24375858|ref|NP_719901.1| membrane protein, putative [Shewane... 42 0.096
gi|24762223|ref|NP_081142.1| dispatched homolog 1; dispatched A;... 42 0.096
gi|26983974|gb|AAN64660.1| dispatched [Mus musculus] 42 0.096
gi|23092587|gb|AAN08631.1| DISP1 [Mus musculus] 42 0.096
gi|46126145|ref|XP_387626.1| hypothetical protein FG07450.1 [Gib... 42 0.13
gi|15639777|ref|NP_219227.1| antibiotic transport protein, putat... 42 0.13
gi|14521877|ref|NP_127353.1| Transport protein [Pyrococcus abyss... 42 0.16
gi|24374998|ref|NP_719041.1| RND multidrug efflux transporter Me... 42 0.16
gi|48863979|ref|ZP_00317872.1| COG1033: Predicted exporters of t... 42 0.16
gi|630597|pir||S44797 F09G8.4 protein - Caenorhabditis elegans 42 0.16
gi|30348887|gb|AAN28930.1| putative RND family efflux protein P1... 41 0.21
gi|6683905|gb|AAF23397.1| Dispatched [Drosophila melanogaster] 41 0.21
gi|24644456|ref|NP_524734.2| CG2019-PA [Drosophila melanogaster]... 41 0.21
gi|18447307|gb|AAL68228.1| LD27661p [Drosophila melanogaster] 41 0.21
gi|48831706|ref|ZP_00288761.1| COG1033: Predicted exporters of t... 41 0.21
gi|39580631|emb|CAE72907.1| Hypothetical protein CBG20225 [Caeno... 41 0.28
gi|15598275|ref|NP_251769.1| hypothetical protein [Pseudomonas a... 41 0.28
gi|46164017|ref|ZP_00136444.2| COG1033: Predicted exporters of t... 41 0.28
gi|48844829|ref|ZP_00299125.1| COG1033: Predicted exporters of t... 41 0.28
gi|48782221|ref|ZP_00278773.1| COG1033: Predicted exporters of t... 40 0.36
gi|32404728|ref|XP_322977.1| related to SREBP cleavage activatin... 40 0.36
gi|30248183|ref|NP_840253.1| probable transmembrane multidrug-ef... 40 0.36
gi|32564619|ref|NP_495989.2| SREBP Cleavage activating Protein h... 40 0.36
gi|7498176|pir||T20342 hypothetical protein D2013.8 - Caenorhabd... 40 0.36
gi|16415986|emb|CAB88621.2| related to SREBP cleavage activating... 40 0.36
gi|46130473|ref|ZP_00165349.2| COG0841: Cation/multidrug efflux ... 40 0.48
gi|46581650|ref|YP_012458.1| AcrB/AcrD/AcrF family protein [Desu... 40 0.62
gi|27735091|ref|NP_775766.1| hypothetical protein FLJ30296 [Homo... 40 0.62
gi|46316572|ref|ZP_00217151.1| COG0841: Cation/multidrug efflux ... 40 0.62
gi|47572884|ref|ZP_00242925.1| COG1033: Predicted exporters of t... 40 0.62
gi|48927356|emb|CAG34265.1| RND protein [Stenotrophomonas maltop... 39 0.81
gi|11071584|emb|CAC14595.1| putative RND protein [Stenotrophomon... 39 0.81
gi|48927366|emb|CAG34257.1| RND protein [Stenotrophomonas maltop... 39 0.81
gi|25952134|ref|NP_116279.2| dispatched A [Homo sapiens] 39 1.1
gi|10438861|dbj|BAB15365.1| unnamed protein product [Homo sapiens] 39 1.1
gi|46314036|ref|ZP_00214623.1| COG0841: Cation/multidrug efflux ... 39 1.1
gi|48927349|emb|CAG34250.1| RND protein [Stenotrophomonas maltop... 39 1.1
gi|10435677|dbj|BAB14637.1| unnamed protein product [Homo sapiens] 39 1.1
gi|29347662|ref|NP_811165.1| multidrug efflux membrane fusion pr... 39 1.1
gi|15602997|ref|NP_246069.1| AcrB [Pasteurella multocida Pm70] >... 39 1.1
gi|12698403|gb|AAK01517.1| transport protein [Pseudomonas aerugi... 39 1.1
gi|46912011|emb|CAG18806.1| hypothetical protein [Photobacterium... 39 1.1
gi|5764625|gb|AAD51345.1| SmeB [Stenotrophomonas maltophilia] 39 1.1
gi|21242235|ref|NP_641817.1| RND multidrug efflux transporter Me... 39 1.1
gi|11360045|pir||T42693 hypothetical protein DKFZp434I0428.1 - h... 39 1.1
gi|37932672|gb|AAP43110.1| OqxB [Escherichia coli] 39 1.1
gi|48257180|gb|AAH11542.2| Unknown (protein for IMAGE:3855477) [... 39 1.1
gi|14590211|ref|NP_142276.1| hypothetical protein PH0287 [Pyroco... 38 1.8
gi|26989531|ref|NP_744956.1| transporter, putative [Pseudomonas ... 38 2.4
gi|4996614|dbj|BAA78559.1| protein-export membrane protein [Prev... 38 2.4
gi|20069235|gb|AAM09741.1| tra-2 [Caenorhabditis remanei] 38 2.4
gi|20069239|gb|AAM09743.1| tra-2 [Caenorhabditis remanei] 38 2.4
gi|20069223|gb|AAM09735.1| tra-2 [Caenorhabditis remanei] 38 2.4
gi|20069229|gb|AAM09738.1| tra-2 [Caenorhabditis remanei] 38 2.4
gi|20069221|gb|AAM09734.1| tra-2 [Caenorhabditis remanei] 38 2.4
gi|20069233|gb|AAM09740.1| tra-2 [Caenorhabditis remanei] 38 2.4
gi|20069241|gb|AAM09744.1| tra-2 [Caenorhabditis remanei] 38 2.4
gi|20069231|gb|AAM09739.1| tra-2 [Caenorhabditis remanei] 38 2.4
gi|20069227|gb|AAM09737.1| tra-2 [Caenorhabditis remanei] 38 2.4
gi|20069237|gb|AAM09742.1| tra-2 [Caenorhabditis remanei] 38 2.4
gi|41409735|ref|NP_962571.1| MmpL11 [Mycobacterium avium subsp. ... 37 3.1
gi|45170565|gb|AAO18187.2| putative resistance-nodulation cell d... 37 3.1
gi|46916631|emb|CAG23396.1| Hypothetical integral membrane prote... 37 3.1
gi|42523286|ref|NP_968666.1| NolG efflux transporter [Bdellovibr... 37 3.1
gi|17230624|ref|NP_487172.1| ABC transport protein, ATP-binding ... 37 3.1
gi|50730194|ref|XP_425565.1| PREDICTED: similar to hypothetical ... 37 3.1
gi|11498071|ref|NP_069295.1| conserved hypothetical protein [Arc... 37 3.1
gi|15792360|ref|NP_282183.1| putative integral membrane componen... 37 3.1
gi|6691424|ref|NP_033639.1|ND2_15157 NADH dehydrogenase subunit ... 37 3.1
gi|38050533|ref|XP_138082.2| similar to hypothetical protein [Mu... 37 4.0
gi|34495889|ref|NP_900104.1| acriflavin resistance protein D [Ch... 37 4.0
gi|6324153|ref|NP_014223.1| Hypothetical ORF; Ynl176cp [Saccharo... 37 4.0
gi|46201799|ref|ZP_00208252.1| COG1033: Predicted exporters of t... 37 4.0
gi|48782777|ref|ZP_00279257.1| COG0841: Cation/multidrug efflux ... 37 4.0
gi|39595886|emb|CAE67389.1| Hypothetical protein CBG12874 [Caeno... 37 4.0
gi|21218965|ref|NP_624744.1| putative membrane transport protein... 37 4.0
gi|20069321|gb|AAM09783.1| TRA-2 [Caenorhabditis elegans] 37 4.0
gi|20069307|gb|AAM09776.1| TRA-2 [Caenorhabditis elegans] 37 4.0
gi|20069297|gb|AAM09771.1| TRA-2 [Caenorhabditis elegans] >gnl|B... 37 4.0
gi|20069331|gb|AAM09788.1| TRA-2 [Caenorhabditis elegans] 37 4.0
gi|20069333|gb|AAM09789.1| TRA-2 [Caenorhabditis elegans] 37 4.0
gi|20069305|gb|AAM09775.1| TRA-2 [Caenorhabditis elegans] 37 4.0
gi|20069299|gb|AAM09772.1| TRA-2 [Caenorhabditis elegans] >gnl|B... 37 4.0
gi|20069303|gb|AAM09774.1| TRA-2 [Caenorhabditis elegans] 37 4.0
gi|20069327|gb|AAM09786.1| TRA-2 [Caenorhabditis elegans] 37 4.0
gi|20069329|gb|AAM09787.1| TRA-2 [Caenorhabditis elegans] 37 4.0
gi|20069311|gb|AAM09778.1| TRA-2 [Caenorhabditis elegans] 37 4.0
gi|20069301|gb|AAM09773.1| TRA-2 [Caenorhabditis elegans] 37 4.0
gi|20069319|gb|AAM09782.1| TRA-2 [Caenorhabditis elegans] 37 4.0
gi|20069323|gb|AAM09784.1| TRA-2 [Caenorhabditis elegans] 37 4.0
gi|26331156|dbj|BAC29308.1| unnamed protein product [Mus musculus] 37 5.3
gi|50305435|ref|XP_452677.1| unnamed protein product [Kluyveromy... 37 5.3
gi|34880608|ref|XP_228985.2| similar to hypothetical protein FLJ... 37 5.3
gi|38086898|ref|XP_142262.3| similar to hypothetical protein FLJ... 37 5.3
gi|34881200|ref|XP_213964.2| similar to dispatched [Rattus norve... 37 5.3
gi|45514534|ref|ZP_00166092.1| COG1033: Predicted exporters of t... 37 5.3
gi|46319801|ref|ZP_00220200.1| COG0841: Cation/multidrug efflux ... 37 5.3
gi|18976634|ref|NP_577991.1| mfs transporter [Pyrococcus furiosu... 36 6.9
gi|39936021|ref|NP_948297.1| putative RND multidrug efflux trans... 36 6.9
gi|48782685|ref|ZP_00279191.1| COG1033: Predicted exporters of t... 36 6.9
gi|32491357|ref|NP_871611.1| kup [Wigglesworthia glossinidia end... 36 6.9
gi|17570553|ref|NP_508377.1| growth factor receptor (62.1 kD) (X... 36 6.9
gi|30249101|ref|NP_841171.1| RND multidrug efflux transporter [N... 36 6.9
gi|25990163|gb|AAN74869.1| patched-like protein [Gallus gallus] ... 36 6.9
gi|50257490|gb|EAL20195.1| hypothetical protein CNBF0070 [Crypto... 36 6.9
gi|21228954|ref|NP_634876.1| Membrane protein related to SecD/Se... 36 6.9
gi|48851350|ref|ZP_00305592.1| COG0841: Cation/multidrug efflux ... 36 9.0
gi|21220918|ref|NP_626697.1| putative integral membrane protein ... 36 9.0
gi|21233427|ref|NP_639344.1| membrane protein [Xanthomonas campe... 36 9.0
gi|48837151|ref|ZP_00294146.1| COG2409: Predicted drug exporters... 36 9.0
gi|22760211|dbj|BAC11106.1| unnamed protein product [Homo sapiens] 36 9.0
gi|39596750|emb|CAE63369.1| Hypothetical protein CBG07780 [Caeno... 36 9.0
gi|20069160|gb|AAM09705.1| tra-2 [Caenorhabditis briggsae] >gnl|... 36 9.0
gi|20069158|gb|AAM09704.1| tra-2 [Caenorhabditis briggsae] >gnl|... 36 9.0
>gi|17537719|ref|NP_494383.1| patched family member (ptc-3)
[Caenorhabditis elegans]
gi|15668169|gb|AAL05588.1| Patched family protein 3, isoform b
[Caenorhabditis elegans]
Length = 1391
Score = 2665 bits (6909), Expect = 0.0
Identities = 1322/1391 (95%), Positives = 1322/1391 (95%)
Frame = -1
Query: 4176 MSFPDEETDLLSEAKHCIRNVIHRTHRKFLENRLIGNFDSEDFSDAWKKKFAHAPTWCDA 3997
MSFPDEETDLLSEAKHCIRNVIHRTHRKFLENRLIGNFDSEDFSDAWKKKFAHAPTWCDA
Sbjct: 1 MSFPDEETDLLSEAKHCIRNVIHRTHRKFLENRLIGNFDSEDFSDAWKKKFAHAPTWCDA 60
Query: 3996 DMSLQQIKRGKAVGNTVALTARAFFQLWLFRIGCFVQRWAWSTIFISHYGAHFEAPDLQN 3817
DMSLQQIKRGKAVGNTVALTARAFFQLWLFRIGCFVQRWAWSTIFISHYGAHFEAPDLQN
Sbjct: 61 DMSLQQIKRGKAVGNTVALTARAFFQLWLFRIGCFVQRWAWSTIFISHYGAHFEAPDLQN 120
Query: 3816 PNSMSISSLFLYCLCLGGLRHVTIETDLVKLWVSEGGRLNEEMGYLGQVKFERESGHLVH 3637
PNSMSISSLFLYCLCLGGLRHVTIETDLVKLWVSEGGRLNEEMGYLGQVKFERESGHLVH
Sbjct: 121 PNSMSISSLFLYCLCLGGLRHVTIETDLVKLWVSEGGRLNEEMGYLGQVKFERESGHLVH 180
Query: 3636 KVKRAVEQTTEPPAPAVKAEVRRGPELPKENGLGGGFQVVIQTPSFDGQNILSKEALQQH 3457
KVKRAVEQTTEPPAPAVKAEVRRGPELPKENGLGGGFQVVIQTPSFDGQNILSKEALQQH
Sbjct: 181 KVKRAVEQTTEPPAPAVKAEVRRGPELPKENGLGGGFQVVIQTPSFDGQNILSKEALQQH 240
Query: 3456 TKLMEEISTYEVKMFNETWTLSDICFKPPGPSFNSGPLAGIMSKLLDKIIPCIWITPIDC 3277
TKLMEEISTYEVKMFNETWTLSDICFKPPGPSFNSGPLAGIMSKLLDKIIPCIWITPIDC
Sbjct: 241 TKLMEEISTYEVKMFNETWTLSDICFKPPGPSFNSGPLAGIMSKLLDKIIPCIWITPIDC 300
Query: 3276 YWDGAKXXXXXXXXXXXPEVASFVSSLPPGNVTWKNLNPTSVIKEVGTLFDLGPIGNFFE 3097
YWDGAK PEVASFVSSLPPGNVTWKNLNPTSVIKEVGTLFDLGPIGNFFE
Sbjct: 301 YWDGAKPLGPNPPLNLGPEVASFVSSLPPGNVTWKNLNPTSVIKEVGTLFDLGPIGNFFE 360
Query: 3096 RAGIDGAYLDRPCIDPLEEECPKSAPNYFDRCHALTKFNEWNMAKAMSEQVTLERKIIPK 2917
RAGIDGAYLDRPCIDPLEEECPKSAPNYFDRCHALTKFNEWNMAKAMSEQVTLERKIIPK
Sbjct: 361 RAGIDGAYLDRPCIDPLEEECPKSAPNYFDRCHALTKFNEWNMAKAMSEQVTLERKIIPK 420
Query: 2916 DDGKSDIAETILNDIFGKKRRKRQXXXXXXXXXXXXXXXXXXXXXXXXYLAGIANSTIAK 2737
DDGKSDIAETILNDIFGKKRRKRQ YLAGIANSTIAK
Sbjct: 421 DDGKSDIAETILNDIFGKKRRKRQADTTTKKPATKKDEDYYEYEDDADYLAGIANSTIAK 480
Query: 2736 KNPEKEAKDLLCLEYGSSLLKWMQENPERLGEFLTKEEMPDYPNYGDVMTGGCKGFGKKI 2557
KNPEKEAKDLLCLEYGSSLLKWMQENPERLGEFLTKEEMPDYPNYGDVMTGGCKGFGKKI
Sbjct: 481 KNPEKEAKDLLCLEYGSSLLKWMQENPERLGEFLTKEEMPDYPNYGDVMTGGCKGFGKKI 540
Query: 2556 MEWPEDLIIGGIQRDNGKLVSAEALQSVFLVSGAYDVFARIKNDKTDSHPGLDRHHFQPW 2377
MEWPEDLIIGGIQRDNGKLVSAEALQSVFLVSGAYDVFARIKNDKTDSHPGLDRHHFQPW
Sbjct: 541 MEWPEDLIIGGIQRDNGKLVSAEALQSVFLVSGAYDVFARIKNDKTDSHPGLDRHHFQPW 600
Query: 2376 MAGEIISTWQRNFTKRLYSHELNRERRQFHPLASTSIADMLEEFSQFNXXXXXXXXXXXX 2197
MAGEIISTWQRNFTKRLYSHELNRERRQFHPLASTSIADMLEEFSQFN
Sbjct: 601 MAGEIISTWQRNFTKRLYSHELNRERRQFHPLASTSIADMLEEFSQFNYIIIVIGYILMV 660
Query: 2196 XYAAFTQGRFQGWWLAVQSNVALAICGVILVTISSICGLGFATHLGINFNAATTQVVPFL 2017
YAAFTQGRFQGWWLAVQSNVALAICGVILVTISSICGLGFATHLGINFNAATTQVVPFL
Sbjct: 661 IYAAFTQGRFQGWWLAVQSNVALAICGVILVTISSICGLGFATHLGINFNAATTQVVPFL 720
Query: 2016 SLGLGIDDMFLLLHNYDEIINICNKNEIGVLLKETGMSVMLTSINNILAFISGYVLPIPA 1837
SLGLGIDDMFLLLHNYDEIINICNKNEIGVLLKETGMSVMLTSINNILAFISGYVLPIPA
Sbjct: 721 SLGLGIDDMFLLLHNYDEIINICNKNEIGVLLKETGMSVMLTSINNILAFISGYVLPIPA 780
Query: 1836 LRSFCSQTAILLAFNLIFLMFIFPAMIGIDLRRQRKGKRDLAYCSRGNPQMATSQSVPSN 1657
LRSFCSQTAILLAFNLIFLMFIFPAMIGIDLRRQRKGKRDLAYCSRGNPQMATSQSVPSN
Sbjct: 781 LRSFCSQTAILLAFNLIFLMFIFPAMIGIDLRRQRKGKRDLAYCSRGNPQMATSQSVPSN 840
Query: 1656 VSNNTQMSSRAELAGYEKQADEYKRHEPWYTVGGFLNKIYIPALKNNVVKACVLIGTTTA 1477
VSNNTQMSSRAELAGYEKQADEYKRHEPWYTVGGFLNKIYIPALKNNVVKACVLIGTTTA
Sbjct: 841 VSNNTQMSSRAELAGYEKQADEYKRHEPWYTVGGFLNKIYIPALKNNVVKACVLIGTTTA 900
Query: 1476 VVFGLYGMYTSTLGLELADVLPEHTPPAAFLRAREQYFSFYPMFAVLRGDKLDIPNQQQL 1297
VVFGLYGMYTSTLGLELADVLPEHTPPAAFLRAREQYFSFYPMFAVLRGDKLDIPNQQQL
Sbjct: 901 VVFGLYGMYTSTLGLELADVLPEHTPPAAFLRAREQYFSFYPMFAVLRGDKLDIPNQQQL 960
Query: 1296 IEEYRAQLGSSKFMIKAEGKLQPYWMSMLRVWLQSLDMALEKDLAAGKFDLTNGNPIKVN 1117
IEEYRAQLGSSKFMIKAEGKLQPYWMSMLRVWLQSLDMALEKDLAAGKFDLTNGNPIKVN
Sbjct: 961 IEEYRAQLGSSKFMIKAEGKLQPYWMSMLRVWLQSLDMALEKDLAAGKFDLTNGNPIKVN 1020
Query: 1116 GEKPSPESMIAARLVCSFGTNYNCDGRLGKMKMVENEVINPEGFYNYLTGWFNVDNMMYY 937
GEKPSPESMIAARLVCSFGTNYNCDGRLGKMKMVENEVINPEGFYNYLTGWFNVDNMMYY
Sbjct: 1021 GEKPSPESMIAARLVCSFGTNYNCDGRLGKMKMVENEVINPEGFYNYLTGWFNVDNMMYY 1080
Query: 936 VSQASFYPTPPGWEYNEKLAKVVPAAEPLLYSQMPFYQNDLIDTPAIVKMIEEIRATCEE 757
VSQASFYPTPPGWEYNEKLAKVVPAAEPLLYSQMPFYQNDLIDTPAIVKMIEEIRATCEE
Sbjct: 1081 VSQASFYPTPPGWEYNEKLAKVVPAAEPLLYSQMPFYQNDLIDTPAIVKMIEEIRATCEE 1140
Query: 756 YSERGLSNHPSGIAFTFWEQYLTLRWNLFQAICIIALAVFCVISILMFNPWAATLIMCIV 577
YSERGLSNHPSGIAFTFWEQYLTLRWNLFQAICIIALAVFCVISILMFNPWAATLIMCIV
Sbjct: 1141 YSERGLSNHPSGIAFTFWEQYLTLRWNLFQAICIIALAVFCVISILMFNPWAATLIMCIV 1200
Query: 576 VITTIELGGFMGLMGIKMNPISAVTLICAVGIGVEFTAHVELAFLTALGTIDQRLESCLQ 397
VITTIELGGFMGLMGIKMNPISAVTLICAVGIGVEFTAHVELAFLTALGTIDQRLESCLQ
Sbjct: 1201 VITTIELGGFMGLMGIKMNPISAVTLICAVGIGVEFTAHVELAFLTALGTIDQRLESCLQ 1260
Query: 396 HMFVPVYHGAISTFLGVVMLVFSEFDFVVTYFFYTMTLLVALGVFNGLCVLPVILTLVGP 217
HMFVPVYHGAISTFLGVVMLVFSEFDFVVTYFFYTMTLLVALGVFNGLCVLPVILTLVGP
Sbjct: 1261 HMFVPVYHGAISTFLGVVMLVFSEFDFVVTYFFYTMTLLVALGVFNGLCVLPVILTLVGP 1320
Query: 216 KPELTPTDGSSVLPPPPPLRQQYAEKSGGVEGGMRKRKEKRPAEVEMXXXXXXXXXXXXX 37
KPELTPTDGSSVLPPPPPLRQQYAEKSGGVEGGMRKRKEKRPAEVEM
Sbjct: 1321 KPELTPTDGSSVLPPPPPLRQQYAEKSGGVEGGMRKRKEKRPAEVEMSARDSPSTSSASH 1380
Query: 36 XXXXXXXXAHK 4
AHK
Sbjct: 1381 SSDDESSPAHK 1391
>gi|17537717|ref|NP_494384.1| patched family member (ptc-3)
[Caenorhabditis elegans]
gi|7331717|gb|AAF60405.1| Patched family protein 3, isoform a
[Caenorhabditis elegans]
Length = 1388
Score = 2654 bits (6879), Expect = 0.0
Identities = 1319/1391 (94%), Positives = 1319/1391 (94%)
Frame = -1
Query: 4176 MSFPDEETDLLSEAKHCIRNVIHRTHRKFLENRLIGNFDSEDFSDAWKKKFAHAPTWCDA 3997
MSFPDEETDLLSEAKHCIRNVIHRTHRKFLENRLIGNFDSEDFSDAWKKKFAHAPTWCDA
Sbjct: 1 MSFPDEETDLLSEAKHCIRNVIHRTHRKFLENRLIGNFDSEDFSDAWKKKFAHAPTWCDA 60
Query: 3996 DMSLQQIKRGKAVGNTVALTARAFFQLWLFRIGCFVQRWAWSTIFISHYGAHFEAPDLQN 3817
DMSLQQIKRGKAVGNTVALTARAFFQLWLFRIGCFVQRWAWSTIFISHYGAHFEAPDLQN
Sbjct: 61 DMSLQQIKRGKAVGNTVALTARAFFQLWLFRIGCFVQRWAWSTIFISHYGAHFEAPDLQN 120
Query: 3816 PNSMSISSLFLYCLCLGGLRHVTIETDLVKLWVSEGGRLNEEMGYLGQVKFERESGHLVH 3637
PNSMSISSLFLYCLCLGGLRHVTIETDLVKLWVSEGGRLNEEMGYLGQVKFERESGHLVH
Sbjct: 121 PNSMSISSLFLYCLCLGGLRHVTIETDLVKLWVSEGGRLNEEMGYLGQVKFERESGHLVH 180
Query: 3636 KVKRAVEQTTEPPAPAVKAEVRRGPELPKENGLGGGFQVVIQTPSFDGQNILSKEALQQH 3457
KVKRAVEQTTEPPAPAVKAEVRRGPELPKENGLGGGFQVVIQTPSFDGQNILSKEALQQH
Sbjct: 181 KVKRAVEQTTEPPAPAVKAEVRRGPELPKENGLGGGFQVVIQTPSFDGQNILSKEALQQH 240
Query: 3456 TKLMEEISTYEVKMFNETWTLSDICFKPPGPSFNSGPLAGIMSKLLDKIIPCIWITPIDC 3277
TKLMEEISTYEVKMFNETWTLSDICFKPPGPSFNSGPLAGIMSKLLDKIIPCIWITPIDC
Sbjct: 241 TKLMEEISTYEVKMFNETWTLSDICFKPPGPSFNSGPLAGIMSKLLDKIIPCIWITPIDC 300
Query: 3276 YWDGAKXXXXXXXXXXXPEVASFVSSLPPGNVTWKNLNPTSVIKEVGTLFDLGPIGNFFE 3097
YWDGAK PEVASFVSSLPPGNVTWKNLNPTSVIKEVGTLFDLGPIGNFFE
Sbjct: 301 YWDGAKPLGPNPPLNLGPEVASFVSSLPPGNVTWKNLNPTSVIKEVGTLFDLGPIGNFFE 360
Query: 3096 RAGIDGAYLDRPCIDPLEEECPKSAPNYFDRCHALTKFNEWNMAKAMSEQVTLERKIIPK 2917
RAGIDGAYLDRPCIDPLEEECPKSAPNYFDRCHALTKFNEWNMAKAMSEQVTLERKIIPK
Sbjct: 361 RAGIDGAYLDRPCIDPLEEECPKSAPNYFDRCHALTKFNEWNMAKAMSEQVTLERKIIPK 420
Query: 2916 DDGKSDIAETILNDIFGKKRRKRQXXXXXXXXXXXXXXXXXXXXXXXXYLAGIANSTIAK 2737
DDGKSDIAETILNDIFGKKRRKRQ YLAGIANSTIAK
Sbjct: 421 DDGKSDIAETILNDIFGKKRRKRQADTTTKKPATKKDEDYYEYEDDADYLAGIANSTIAK 480
Query: 2736 KNPEKEAKDLLCLEYGSSLLKWMQENPERLGEFLTKEEMPDYPNYGDVMTGGCKGFGKKI 2557
KNPEKEAKDLLCLEYGSSLLKWMQENPERLGEFLTKEEMPDYPNYGDVMTGGCKGFGKKI
Sbjct: 481 KNPEKEAKDLLCLEYGSSLLKWMQENPERLGEFLTKEEMPDYPNYGDVMTGGCKGFGKKI 540
Query: 2556 MEWPEDLIIGGIQRDNGKLVSAEALQSVFLVSGAYDVFARIKNDKTDSHPGLDRHHFQPW 2377
MEWPEDLIIGGIQRDNGKLVSAEALQSVFLVSGAYDVFARIKNDKTDSHPGLDRHHFQPW
Sbjct: 541 MEWPEDLIIGGIQRDNGKLVSAEALQSVFLVSGAYDVFARIKNDKTDSHPGLDRHHFQPW 600
Query: 2376 MAGEIISTWQRNFTKRLYSHELNRERRQFHPLASTSIADMLEEFSQFNXXXXXXXXXXXX 2197
MAGEIISTWQRNFTKRLYSHELNRERRQFHPLASTSIADMLEEFSQFN
Sbjct: 601 MAGEIISTWQRNFTKRLYSHELNRERRQFHPLASTSIADMLEEFSQFNYIIIVIGYILMV 660
Query: 2196 XYAAFTQGRFQGWWLAVQSNVALAICGVILVTISSICGLGFATHLGINFNAATTQVVPFL 2017
YAAFTQGRFQGWWLAVQSNVALAICGVILVTISSICGLGFATHLGINFNAATTQVVPFL
Sbjct: 661 IYAAFTQGRFQGWWLAVQSNVALAICGVILVTISSICGLGFATHLGINFNAATTQVVPFL 720
Query: 2016 SLGLGIDDMFLLLHNYDEIINICNKNEIGVLLKETGMSVMLTSINNILAFISGYVLPIPA 1837
SLGLGIDDMFLLLHNYDEIINICNKNEIGVLLKETGMSVMLTSINNILAFISGYVLPIPA
Sbjct: 721 SLGLGIDDMFLLLHNYDEIINICNKNEIGVLLKETGMSVMLTSINNILAFISGYVLPIPA 780
Query: 1836 LRSFCSQTAILLAFNLIFLMFIFPAMIGIDLRRQRKGKRDLAYCSRGNPQMATSQSVPSN 1657
LRSFCSQTAILLAFNLIFLMFIFPAMIGIDLRRQRKGKRDLAYCSRGNPQMATSQSVPSN
Sbjct: 781 LRSFCSQTAILLAFNLIFLMFIFPAMIGIDLRRQRKGKRDLAYCSRGNPQMATSQSVPSN 840
Query: 1656 VSNNTQMSSRAELAGYEKQADEYKRHEPWYTVGGFLNKIYIPALKNNVVKACVLIGTTTA 1477
VSN MSSRAELAGYEKQADEYKRHEPWYTVGGFLNKIYIPALKNNVVKACVLIGTTTA
Sbjct: 841 VSN---MSSRAELAGYEKQADEYKRHEPWYTVGGFLNKIYIPALKNNVVKACVLIGTTTA 897
Query: 1476 VVFGLYGMYTSTLGLELADVLPEHTPPAAFLRAREQYFSFYPMFAVLRGDKLDIPNQQQL 1297
VVFGLYGMYTSTLGLELADVLPEHTPPAAFLRAREQYFSFYPMFAVLRGDKLDIPNQQQL
Sbjct: 898 VVFGLYGMYTSTLGLELADVLPEHTPPAAFLRAREQYFSFYPMFAVLRGDKLDIPNQQQL 957
Query: 1296 IEEYRAQLGSSKFMIKAEGKLQPYWMSMLRVWLQSLDMALEKDLAAGKFDLTNGNPIKVN 1117
IEEYRAQLGSSKFMIKAEGKLQPYWMSMLRVWLQSLDMALEKDLAAGKFDLTNGNPIKVN
Sbjct: 958 IEEYRAQLGSSKFMIKAEGKLQPYWMSMLRVWLQSLDMALEKDLAAGKFDLTNGNPIKVN 1017
Query: 1116 GEKPSPESMIAARLVCSFGTNYNCDGRLGKMKMVENEVINPEGFYNYLTGWFNVDNMMYY 937
GEKPSPESMIAARLVCSFGTNYNCDGRLGKMKMVENEVINPEGFYNYLTGWFNVDNMMYY
Sbjct: 1018 GEKPSPESMIAARLVCSFGTNYNCDGRLGKMKMVENEVINPEGFYNYLTGWFNVDNMMYY 1077
Query: 936 VSQASFYPTPPGWEYNEKLAKVVPAAEPLLYSQMPFYQNDLIDTPAIVKMIEEIRATCEE 757
VSQASFYPTPPGWEYNEKLAKVVPAAEPLLYSQMPFYQNDLIDTPAIVKMIEEIRATCEE
Sbjct: 1078 VSQASFYPTPPGWEYNEKLAKVVPAAEPLLYSQMPFYQNDLIDTPAIVKMIEEIRATCEE 1137
Query: 756 YSERGLSNHPSGIAFTFWEQYLTLRWNLFQAICIIALAVFCVISILMFNPWAATLIMCIV 577
YSERGLSNHPSGIAFTFWEQYLTLRWNLFQAICIIALAVFCVISILMFNPWAATLIMCIV
Sbjct: 1138 YSERGLSNHPSGIAFTFWEQYLTLRWNLFQAICIIALAVFCVISILMFNPWAATLIMCIV 1197
Query: 576 VITTIELGGFMGLMGIKMNPISAVTLICAVGIGVEFTAHVELAFLTALGTIDQRLESCLQ 397
VITTIELGGFMGLMGIKMNPISAVTLICAVGIGVEFTAHVELAFLTALGTIDQRLESCLQ
Sbjct: 1198 VITTIELGGFMGLMGIKMNPISAVTLICAVGIGVEFTAHVELAFLTALGTIDQRLESCLQ 1257
Query: 396 HMFVPVYHGAISTFLGVVMLVFSEFDFVVTYFFYTMTLLVALGVFNGLCVLPVILTLVGP 217
HMFVPVYHGAISTFLGVVMLVFSEFDFVVTYFFYTMTLLVALGVFNGLCVLPVILTLVGP
Sbjct: 1258 HMFVPVYHGAISTFLGVVMLVFSEFDFVVTYFFYTMTLLVALGVFNGLCVLPVILTLVGP 1317
Query: 216 KPELTPTDGSSVLPPPPPLRQQYAEKSGGVEGGMRKRKEKRPAEVEMXXXXXXXXXXXXX 37
KPELTPTDGSSVLPPPPPLRQQYAEKSGGVEGGMRKRKEKRPAEVEM
Sbjct: 1318 KPELTPTDGSSVLPPPPPLRQQYAEKSGGVEGGMRKRKEKRPAEVEMSARDSPSTSSASH 1377
Query: 36 XXXXXXXXAHK 4
AHK
Sbjct: 1378 SSDDESSPAHK 1388
>gi|39584667|emb|CAE72420.1| Hypothetical protein CBG19582
[Caenorhabditis briggsae]
Length = 1380
Score = 2315 bits (5998), Expect = 0.0
Identities = 1152/1369 (84%), Positives = 1230/1369 (89%), Gaps = 6/1369 (0%)
Frame = -1
Query: 4164 DEETDLLSEAKHCIRNVIHRTHRKFLENRLIGNFDSEDFSDAWKKKFAHAPTWCDADMSL 3985
+E+T LL EAK+CI++V+ +T +KF+ENRLIGNFDSEDFSDAWKKKF+HAPTWCDADMSL
Sbjct: 1 EEKTSLLLEAKYCIKSVLGKTQKKFVENRLIGNFDSEDFSDAWKKKFSHAPTWCDADMSL 60
Query: 3984 QQIKRGKAVGNTVALTARAFFQLWLFRIGCFVQRWAWSTIFISHYGAHFEAPDLQNPNSM 3805
QQIKRG A GN +AL ARAFFQLWL+RIGCFVQR+A STI I N +
Sbjct: 61 QQIKRGNAQGNRIALYARAFFQLWLYRIGCFVQRYA-STIII-------RVISNVNLKNF 112
Query: 3804 SISSLFLYCLCLGGLRHVTIETDLVKLWVSEGGRLNEEMGYLGQVKFERESGHL--VHKV 3631
+ SS+ LYCLCLGGL+HV IETDLVKLWVSEGGRLNEEM YLG+VK ERESGHL +HK+
Sbjct: 113 NFSSMVLYCLCLGGLQHVVIETDLVKLWVSEGGRLNEEMEYLGRVKHERESGHLHHMHKI 172
Query: 3630 KRAVEQTTEPPAPAVKAEVRRGPELPKENGLGGGFQVVIQTPSFDGQNILSKEALQQHTK 3451
KR +E+ + P PAVKAEVRRGPELPKENGLGGGFQVVIQTPS+DG+N+LSKEALQ+HTK
Sbjct: 173 KRDIEKAVKAP-PAVKAEVRRGPELPKENGLGGGFQVVIQTPSYDGENVLSKEALQKHTK 231
Query: 3450 LMEEISTYEVKMFNETWTLSDICFKPPGPSFNSGPLAGIMSKLLDKIIPCIWITPIDCYW 3271
LM+EI++YEV MFNETWTL+DICFKPPGPSFNSGPLAGIMSKLLDKIIPCIWITP+DCYW
Sbjct: 232 LMQEIASYEVHMFNETWTLADICFKPPGPSFNSGPLAGIMSKLLDKIIPCIWITPVDCYW 291
Query: 3270 DGAKXXXXXXXXXXXPEVASFVSSLPPGNVTWKNLNPTSVIKEVGTLFDLGPIGNFFERA 3091
DGAK PEVASF+SSLPPGNVTWKNLNPTSVIKEVG LFDLGPIGNFFERA
Sbjct: 292 DGAKALGPNPPLNLGPEVASFISSLPPGNVTWKNLNPTSVIKEVGQLFDLGPIGNFFERA 351
Query: 3090 GIDGAYLDRPCIDPLEEECPKSAPNYFDRCHALTKFNEWNMAKAMSEQVTLERKIIPKDD 2911
GIDGAYLDRPCIDPLEEECPKSAPNYFDRC ALTKFNEWN+AK+MSEQVTLERKII K++
Sbjct: 352 GIDGAYLDRPCIDPLEEECPKSAPNYFDRCAALTKFNEWNLAKSMSEQVTLERKIIKKEE 411
Query: 2910 GKSDIAETILNDIFGKKRRKRQXXXXXXXXXXXXXXXXXXXXXXXXYLAGIANSTIAKKN 2731
DIAE+IL+DIFGKKRRKRQ Y+ G+ N+T KK+
Sbjct: 412 ETKDIAESILSDIFGKKRRKRQAEASEDSDGSKKDDDYYAYEDDADYINGLGNTTTPKKD 471
Query: 2730 PEKEAKDLLCLEYGSSLLKWMQENPERLGEFLTKEEMPDYPNYGDVMTGGCKGFGKKIME 2551
EKEAK+ LCLEYGSSLLKWMQENP RLGEFLTKEEMP YPNYGDVMTGGCKGFGKKIME
Sbjct: 472 AEKEAKNTLCLEYGSSLLKWMQENPTRLGEFLTKEEMPKYPNYGDVMTGGCKGFGKKIME 531
Query: 2550 WPEDLIIGGIQRDNGKLVSAEALQSVFLVSGAYDVFARIKNDKTDSHPGLDRHHFQPWMA 2371
WPEDLIIGGI+R+NGKLVSAEALQSVFLVSG YDVFARIKNDKTDSHPGL+RH FQPWMA
Sbjct: 532 WPEDLIIGGIERENGKLVSAEALQSVFLVSGPYDVFARIKNDKTDSHPGLNRHGFQPWMA 591
Query: 2370 GEIISTWQRNFTKRLYSHELNRERRQFHPLASTSIADMLEEFSQFNXXXXXXXXXXXXXY 2191
GEII+TWQRNFTK+LY HELN+ERR FHPLASTSIADMLEEFSQFN Y
Sbjct: 592 GEIITTWQRNFTKKLYRHELNQERRVFHPLASTSIADMLEEFSQFNYIIIVIGYILMVIY 651
Query: 2190 AAFTQGRFQGWWLAVQSNVALAICGVILVTISSICGLGFATHLGINFNAATTQVVPFLSL 2011
AAFTQGRFQGWWLAVQSNVALAI GV+LVT SSICGLGFATHLGINFNAATTQVVPFLSL
Sbjct: 652 AAFTQGRFQGWWLAVQSNVALAIAGVMLVTFSSICGLGFATHLGINFNAATTQVVPFLSL 711
Query: 2010 GLGIDDMFLLLHNYDEIINICNKNEIGVLLKETGMSVMLTSINNILAFISGYVLPIPALR 1831
GLGIDDMFLLLHNYDEIINIC+KNEIGVLLKETGMSVMLTSINNILAFISGYVLPIPALR
Sbjct: 712 GLGIDDMFLLLHNYDEIINICHKNEIGVLLKETGMSVMLTSINNILAFISGYVLPIPALR 771
Query: 1830 SFCSQTAILLAFNLIFLMFIFPAMIGIDLRRQRKGKRDLAYCSRGNPQMATSQSVPSNVS 1651
SFCSQTAILLAFNLIFLMFIFPAMIGIDLRRQRKGKRDLAYCSRG PQM SQSVPSNVS
Sbjct: 772 SFCSQTAILLAFNLIFLMFIFPAMIGIDLRRQRKGKRDLAYCSRGTPQMPASQSVPSNVS 831
Query: 1650 NNTQMSSRAELAGYEKQADEYKRHEPWYTVGGFLNKIYIPALKNNVVKACVLIGTTTAVV 1471
N +QMSSRAELAGY+KQA E+KRHEPWYTVGGFLN IYIPALKNN+ KA +LIGT TAVV
Sbjct: 832 NKSQMSSRAELAGYDKQAAEFKRHEPWYTVGGFLNNIYIPALKNNLCKAVILIGTATAVV 891
Query: 1470 FGLYGMYTSTLGLELADVLPEHTPPAAFLRAREQYFSFYPMFAVLRGDKLDIPNQQQLIE 1291
FGLYGMYTSTLGLELADVLPEHTPPAAFLRARE+YFSFYPMFAVL+G+ +DIPNQQQLIE
Sbjct: 892 FGLYGMYTSTLGLELADVLPEHTPPAAFLRAREKYFSFYPMFAVLKGNDIDIPNQQQLIE 951
Query: 1290 EYRAQLGSSKFMIKAEGKLQPYWMSMLRVWLQSLDMALEKDLAAGKFDLTNGNPIKVNGE 1111
EYR QLG+SKFMIKAEGKLQPYWMSMLRVWLQSLD ALEKDLAAGKFDLTNGNPIKVNGE
Sbjct: 952 EYRQQLGASKFMIKAEGKLQPYWMSMLRVWLQSLDKALEKDLAAGKFDLTNGNPIKVNGE 1011
Query: 1110 KPSPESMIAARLVCSFGTNYNCDGRLGKMKMV-ENEVINPEGFYNYLTGWFNVDNMMYYV 934
KP+PESMIAARLVCSFGTNY+C GRLGK+KMV +N+VINPEGFYNYLTGWFNVDNMMYYV
Sbjct: 1012 KPTPESMIAARLVCSFGTNYDCSGRLGKIKMVDQNDVINPEGFYNYLTGWFNVDNMMYYV 1071
Query: 933 SQASFYPTPPGWEYNEKLAKVVPAAEPLLYSQMPFYQNDLIDTPAIVKMIEEIRATCEEY 754
SQASFYPTPPGWEYNEK AKVVPAAEPLLYSQMPFYQNDL+DTPAIVKMIEEIRA CEEY
Sbjct: 1072 SQASFYPTPPGWEYNEKTAKVVPAAEPLLYSQMPFYQNDLVDTPAIVKMIEEIRAICEEY 1131
Query: 753 SERGLSNHPSGIAFTFWEQYLTLRWNLFQAICIIALAVFCVISILMFNPWAATLIMCIVV 574
+ER L N+PSGIAFTFWEQYL+LR+NLF AI IIA AVF VISILMFNPWAATLIMCIVV
Sbjct: 1132 TERSLPNYPSGIAFTFWEQYLSLRFNLFMAILIIAAAVFTVISILMFNPWAATLIMCIVV 1191
Query: 573 ITTIELGGFMGLMGIKMNPISAVTLICAVGIGVEFTAHVELAFLTALGTIDQRLESCLQH 394
ITTIELGGFMGLMGIKMNPISAVTLICAVGIGVEFTAHVELAFLT+LGTIDQRLESCLQH
Sbjct: 1192 ITTIELGGFMGLMGIKMNPISAVTLICAVGIGVEFTAHVELAFLTSLGTIDQRLESCLQH 1251
Query: 393 MFVPVYHGAISTFLGVVMLVFSEFDFVVTYFFYTMTLLVALGVFNGLCVLPVILTLVGPK 214
MFVPVYHGAISTFLGVVMLVFSEFDFVV YFFYTMT+LVALGVFNGLCVLPVILTLVGP+
Sbjct: 1252 MFVPVYHGAISTFLGVVMLVFSEFDFVVKYFFYTMTVLVALGVFNGLCVLPVILTLVGPE 1311
Query: 213 PELTPTDGSSVLPPPPPLRQQYAEK---SGGVEGGMRKRKEKRPAEVEM 76
PEL P+ G SVLPPPPPLRQQ AEK GG+EGGMRKRKEK+ AEVEM
Sbjct: 1312 PELIPSSGDSVLPPPPPLRQQNAEKDGYGGGLEGGMRKRKEKKQAEVEM 1360
>gi|39597594|emb|CAE59824.1| Hypothetical protein CBG03294
[Caenorhabditis briggsae]
Length = 1402
Score = 1130 bits (2922), Expect = 0.0
Identities = 605/1360 (44%), Positives = 845/1360 (61%), Gaps = 38/1360 (2%)
Frame = -1
Query: 4095 KFLENRLIGNFDSEDFSDAWKKKFAHAPTWCDADMSLQQIKRGKAVGNTVALTARAFFQL 3916
+FL+ L+G S D++D WK++F P+WCDAD+ LQQ+ RGKA GN AL +R+ Q
Sbjct: 59 RFLDRYLVGQSSSADYNDRWKREFRARPSWCDADLCLQQMNRGKATGNRYALYSRSLIQK 118
Query: 3915 WLFRIGCFVQRWAWSTIFISHYGAHFEAPDLQNPNSMSISSLFLYCLCLGGLRHVTIETD 3736
LF +G V R AWS I + +S +F +C GL++V IETD
Sbjct: 119 LLFALGNAVHRNAWSIILV-------------------VSMIFAFCCY--GLQYVHIETD 157
Query: 3735 LVKLWVSEGGRLNEEMGYLGQVKFERESGHLVHKVKRAVEQTTEPPAPAVKAEVRRGPEL 3556
+VKLWV++GGRL+EE+ +L +K ++ R V GPE+
Sbjct: 158 IVKLWVAQGGRLDEELNFLPNMK----------ELMR-------------NESVDSGPEI 194
Query: 3555 PKENGLGGGFQVVIQTPSFDGQNILSKEALQQHTKLMEEISTYEVKMFNETWTLSDICFK 3376
P+ENGLGGG+QV+IQTP F+GQ+ L++ L +H ++M+ I+++ V + W+LSDICFK
Sbjct: 195 PRENGLGGGYQVLIQTPEFEGQDALAQGPLLKHVEIMKHIASFNVSVHGVDWSLSDICFK 254
Query: 3375 PPGPSFNSGPLAGIMSKLLDKIIPCIWITPIDCYWDGAKXXXXXXXX--XXXPEVASFVS 3202
P PS + A +S ++DKI+PCIWITPIDC+W+G+K V +
Sbjct: 255 PAPPSVSPDSPAASLSDVIDKIVPCIWITPIDCFWEGSKALGPHPSLPKSALGLVGMLLK 314
Query: 3201 SLPPGN-VTWKNLNPTSVIKEVGTLFDLGPIGNFFERAGIDGAYLDRPCIDPLEEECPKS 3025
+LP + + W + +P VI E+ F+LG FFERAG+ Y++RPCIDPL+ ECP
Sbjct: 315 ALPDHDMIRWSDFDPIKVIDEIHNSFNLGSHYTFFERAGVGHGYMNRPCIDPLDPECPPM 374
Query: 3024 APNYFDRCHALTKFNEWNMAKAMSEQVTLERKIIPKDDGKSDIAETILNDIFGKKRRKRQ 2845
A NYFD C + K E +A +++ E++ KD G + FG+K+R+
Sbjct: 375 AKNYFDVCPHVDKIRE--VASKYGQELEQEKQ---KDTGFDVFS------FFGRKKRETD 423
Query: 2844 XXXXXXXXXXXXXXXXXXXXXXXXYLAGIANSTI------------AKKNPEKEAKDLLC 2701
+ A+ AKK ++E ++ C
Sbjct: 424 QQPQMIHPAQPADSIPVVEGAVPADIPVTADPVTTTTTLSREEVENAKKIKDREMREH-C 482
Query: 2700 LEYGSSLLKWMQENPERLGEFLTKEEMPDYPNYGDVMTGGCKGFGKKIMEWPEDLIIGGI 2521
Y S W++ N ++ E + + P +Y + MTGGC GF ++ WPED+I+G
Sbjct: 483 KSYRKSTFNWLKANQDKWTEVMPENVYPKNVDYAEEMTGGCSGFASNVLNWPEDMILGNP 542
Query: 2520 Q--RDNGKLVSAEALQSVFLVSGAYDVFARIKNDKTDSHP--GLDRHHFQPWMAGEIIST 2353
+ + GKL SA+ALQSVFLV+ DVF R K + + P GLD+ + A +++
Sbjct: 543 RHTKRGGKLTSADALQSVFLVASPADVFLRFKQKQGRNPPKSGLDQEAWNETAAEQVLQA 602
Query: 2352 WQRNFTKRLYSHELN-----RERRQFHPLASTSIADMLEEFSQFNXXXXXXXXXXXXXYA 2188
WQRNFTK LY+HE N ERR HPLASTSIADMLEEF QFN YA
Sbjct: 603 WQRNFTKSLYTHEANFDADGNERRTLHPLASTSIADMLEEFCQFNYTIIFAGYALMLAYA 662
Query: 2187 AFTQGRFQGWWLAVQSNVALAICGVILVTISSICGLGFATHLGINFNAATTQVVPFLSLG 2008
TQ RF A +S++ LA+ GV++VT +S+ GLG AT GI FNAATTQ+VPFL+LG
Sbjct: 663 IITQARFDSCLPATESSMGLALAGVLVVTFASVAGLGLATWFGIEFNAATTQIVPFLTLG 722
Query: 2007 LGIDDMFLLLHNYDEIINICNKN-EIGVLLKETGMSVMLTSINNILAFISGYVLPIPALR 1831
+G+D+MF+LLHNY +++ + + E+ +L++ETGMS++ TSINNIL+F++G +LPIPALR
Sbjct: 723 IGVDNMFMLLHNYRDVVKLAGGHAEMAILMRETGMSILCTSINNILSFLTGTLLPIPALR 782
Query: 1830 SFCSQTAILLAFNLIFLMFIFPAMIGIDLRRQRKGKRDLAYCSRGNPQ-----MATSQSV 1666
SFC+Q++ILL FN I ++ I+PA+I IDLRR++ +RDL C G+ + M + +
Sbjct: 783 SFCAQSSILLTFNFIAILTIYPAIISIDLRRKKAQRRDLLCCLYGDTREESYSMISKPKI 842
Query: 1665 PSN--VSNNTQMSSRAELAGYEKQADEYKRHEPW-YTVGGFLNKIYIPALKNNVVKACVL 1495
PS + ++ S + G QA +P Y++ F+ YIP + K ++
Sbjct: 843 PSKRIIGAPSEASIMQQFDGIT-QAQMASSDDPAPYSLHAFIRYYYIPFISRPACKVGII 901
Query: 1494 IGTTTAVVFGLYGMYTSTLGLELADVLPEHTPPAAFLRAREQYFSFYPMFAVLRGDKLDI 1315
IG + +YGM STLGLEL DVLPEHT PA FLRAR++YFSFYPMFAV++G +D
Sbjct: 902 IGCLVLLAASVYGMQQSTLGLELGDVLPEHTAPAQFLRARDKYFSFYPMFAVIKGPNIDY 961
Query: 1314 PNQQQLIEEYRAQLGSSKFMIKAEGK--LQPYWMSMLRVWLQSLDMALEKDLAAGKFDLT 1141
+QQ+ I+ YR +GSSKF+IK + + + YW+ ++R WL S+ ++++A G FDL
Sbjct: 962 AHQQRQIDNYRQSIGSSKFVIKNKNEEPSEKYWLGLMRDWLISIQRGFDEEVAKGSFDLV 1021
Query: 1140 NGNPIKVNGEKPSPESMIAARLVCSFGTNYNCDGRLGKMKMVE-NEVINPEGFYNYLTGW 964
G I N S ++ IA L+CS G Y C GR+GK+++V+ + +IN +GFYNYLT W
Sbjct: 1022 TGTVIAAN---VSEDARIAHALMCSHGELYECAGRVGKIRLVDASGIINSDGFYNYLTAW 1078
Query: 963 FNVDNMMYYVSQASFYPTPPGWEY-NEKLAKVVPAAEPLLYSQMPFYQNDLIDTPAIVKM 787
FNVD+MMYYVSQASF+PTPP WE E +PAA+PL+YSQ+PFY L DT IV+
Sbjct: 1079 FNVDHMMYYVSQASFFPTPPKWELVKENKENFIPAAKPLVYSQIPFYLTGLTDTGVIVEA 1138
Query: 786 IEEIRATCEEYSERGLSNHPSGIAFTFWEQYLTLRWNLFQAICIIALAVFCVISILMFNP 607
I++IR+ C+ ++++GL N P GIAFTFWEQYL L NL QAI II ++VFCVIS+L+FNP
Sbjct: 1139 IKDIRSVCDRFTDQGLPNFPQGIAFTFWEQYLFLTGNLMQAISIITISVFCVISVLLFNP 1198
Query: 606 WAATLIMCIVVITTIELGGFMGLMGIKMNPISAVTLICAVGIGVEFTAHVELAFLTALGT 427
WAA +++CI+ I T EL GFMGL+GIK+NP+SAVTLI AVGIGVEFT HV ++FLTALGT
Sbjct: 1199 WAALMVVCILGIMTCELAGFMGLVGIKLNPVSAVTLITAVGIGVEFTVHVVVSFLTALGT 1258
Query: 426 IDQRLESCLQHMFVPVYHGAISTFLGVVMLVFSEFDFVVTYFFYTMTLLVALGVFNGLCV 247
QR S + +FVPV HG+ ST LG++ML FSEF+FVV YFF MT L+ G+ NGL +
Sbjct: 1259 RAQRTSSAVDRVFVPVIHGSFSTLLGILMLGFSEFEFVVKYFFIVMTALIGTGIINGLIL 1318
Query: 246 LPVILTLVGPKPELTPTDGSSVLPPPPPL-RQQYAEKSGG 130
LPV+L+ GP+ E++P DG + L PPPL + + +SGG
Sbjct: 1319 LPVLLSWFGPRREISPADGKTTLALPPPLPKNLNSSRSGG 1358
>gi|17535373|ref|NP_495662.1| patched family member (ptc-1)
[Caenorhabditis elegans]
gi|37999492|sp|Q09614|PTC1_CAEEL Patched protein homolog 1
gi|7511279|pir||T27969 hypothetical protein ZK675.1 - Caenorhabditis
elegans
gi|3881774|emb|CAA86843.1| Hypothetical protein ZK675.1
[Caenorhabditis elegans]
Length = 1405
Score = 1125 bits (2909), Expect = 0.0
Identities = 601/1364 (44%), Positives = 842/1364 (61%), Gaps = 42/1364 (3%)
Frame = -1
Query: 4095 KFLENRLIGNFDSEDFSDAWKKKFAHAPTWCDADMSLQQIKRGKAVGNTVALTARAFFQL 3916
+FL+ L+G S D++D WK++F P+WCDAD+ LQQ+ RGKA GN AL +R+ Q
Sbjct: 59 RFLDQYLVGQSSSADYNDRWKREFRARPSWCDADLCLQQMNRGKATGNRYALYSRSLIQK 118
Query: 3915 WLFRIGCFVQRWAWSTIFISHYGAHFEAPDLQNPNSMSISSLFLYCLCLGGLRHVTIETD 3736
LF +G V R AWS I +++S +F +C GL++V IETD
Sbjct: 119 LLFALGNTVHRNAWSII-------------------LAVSMIF--AVCCYGLQYVHIETD 157
Query: 3735 LVKLWVSEGGRLNEEMGYLGQVKFERESGHLVHKVKRAVEQTTEPPAPAVKAEVRRGPEL 3556
+VKLWV++GGRL+EE+ +L +K A+ T GPEL
Sbjct: 158 IVKLWVAQGGRLDEELNFLPNIK-------------EAMRNVTGDS----------GPEL 194
Query: 3555 PKENGLGGGFQVVIQTPSFDGQNILSKEALQQHTKLMEEISTYEVKMFNETWTLSDICFK 3376
P+ENGLGGG+QV+IQTP ++GQ+ L+ L +H ++M+ I+++ V + W+LSDICFK
Sbjct: 195 PRENGLGGGYQVLIQTPEYEGQDALAAGPLLKHVEIMKHIASFNVSVHGVDWSLSDICFK 254
Query: 3375 PPGPSFNSGPLAGIMSKLLDKIIPCIWITPIDCYWDGAKXXXXXXXX--XXXPEVASFVS 3202
P PS + A + ++DKI+PCIWITPIDC+W+G+K + +S
Sbjct: 255 PAPPSVAADSAASSLGDVIDKIVPCIWITPIDCFWEGSKALGPHPSLPKSSLGPLGMLLS 314
Query: 3201 SLPPGN-VTWKNLNPTSVIKEVGTLFDLGPIGNFFERAGIDGAYLDRPCIDPLEEECPKS 3025
SL G+ + W + +P +VI E+ F+LG FFERAG+ Y+DRPCIDPL+ ECP
Sbjct: 315 SLSDGDMIRWSDFDPIAVIDEIHRSFNLGSHYTFFERAGVSHGYMDRPCIDPLDPECPPM 374
Query: 3024 APNYFDRCHALTKFNEWNMAKAMSEQVTLERKIIPKDDGKSDIAETILNDIFGKKRRKR- 2848
A NYFD C + + E +AK ++ E+K KD G S D G+K+R+
Sbjct: 375 AKNYFDVCPHIDRVRE--IAKKYGTELEEEKK---KDSGYSFF------DFLGRKKREAG 423
Query: 2847 ---QXXXXXXXXXXXXXXXXXXXXXXXXYLAGIANSTIA------------KKNPEKEAK 2713
+ A I +T KK +E K
Sbjct: 424 DQPKMIHPAQPADSIPTIEDAVPAQVPVSTAPIPTTTTLSPEEARAAEEKEKKQKARELK 483
Query: 2712 DLLCLEYGSSLLKWMQENPERLGEFLTKEEMPDYPNYGDVMTGGCKGFGKKIMEWPEDLI 2533
D C Y S +W+++N ++ E +++ P +Y MTGGC GF ++ WPED+I
Sbjct: 484 DY-CKSYRKSAFEWLKKNKDKWPEVMSENMYPQNVDYAAEMTGGCSGFASNVLNWPEDMI 542
Query: 2532 IGGIQR--DNGKLVSAEALQSVFLVSGAYDVFARIKND--KTDSHPGLDRHHFQPWMAGE 2365
+G +R GKL A+ALQSVFLV+ DVF R K + GLD + A +
Sbjct: 543 LGNPRRAKKGGKLSGADALQSVFLVASPADVFLRFKQKPGRNSMKTGLDMDAWNETAAEQ 602
Query: 2364 IISTWQRNFTKRLYSHELN-----RERRQFHPLASTSIADMLEEFSQFNXXXXXXXXXXX 2200
++ WQRNFTK LY+H+ N ERR HPLASTSIADMLEEF QFN
Sbjct: 603 VLQAWQRNFTKSLYNHKANVDEDGNERRTLHPLASTSIADMLEEFCQFNYTIILAGYALM 662
Query: 2199 XXYAAFTQGRFQGWWLAVQSNVALAICGVILVTISSICGLGFATHLGINFNAATTQVVPF 2020
YA TQ RF A +S++ LA+ GV++VT +S+ GLG AT GI FNAATTQ+VPF
Sbjct: 663 LAYAIVTQARFDNCLPATESSMGLALAGVLVVTFASVAGLGLATWFGIEFNAATTQIVPF 722
Query: 2019 LSLGLGIDDMFLLLHNYDEIINICNKN-EIGVLLKETGMSVMLTSINNILAFISGYVLPI 1843
L+LG+G+D+MF+LLHNY +++ + + E+ +L++ETGMS++ TSINNIL+F++G +LPI
Sbjct: 723 LTLGIGVDNMFMLLHNYRDVVKLAGGHAEMAILMRETGMSILCTSINNILSFLTGTLLPI 782
Query: 1842 PALRSFCSQTAILLAFNLIFLMFIFPAMIGIDLRRQRKGKRDLAYCSRGNPQMATSQSVP 1663
PALRSFC+Q++ILL FN I ++ I+PA+I IDLRR++ +RDL C G+ + + +
Sbjct: 783 PALRSFCAQSSILLTFNFIAILTIYPAIISIDLRRKKAQRRDLVCCLYGDTREESYSMIS 842
Query: 1662 SNVSNNTQMSSRAELAGYEKQADEYKRHE--------PWYTVGGFLNKIYIPALKNNVVK 1507
+ ++ A +Q D + + PW ++ F+ YIP + K
Sbjct: 843 KPKIQSKRIIGAPSEASIMQQFDGITQAQMASSDDPAPW-SLHSFIRYYYIPFISKPASK 901
Query: 1506 ACVLIGTTTAVVFGLYGMYTSTLGLELADVLPEHTPPAAFLRAREQYFSFYPMFAVLRGD 1327
+++G + GM STLGLEL DVLPEHT PA FLRAR++YFSFYPMFAV++G
Sbjct: 902 VAIIVGCCALLGASFIGMRQSTLGLELGDVLPEHTAPAQFLRARDKYFSFYPMFAVIKGP 961
Query: 1326 KLDIPNQQQLIEEYRAQLGSSKFMIKAEGK--LQPYWMSMLRVWLQSLDMALEKDLAAGK 1153
+D +QQ+ I+ YR +GSSK++IK + + + YW+ ++R WL S+ ++++A G
Sbjct: 962 NIDYAHQQRQIDNYRQSIGSSKYVIKNKNEEPSEKYWLGLMRDWLISIQRGFDEEVAKGS 1021
Query: 1152 FDLTNGNPIKVNGEKPSPESMIAARLVCSFGTNYNCDGRLGKMKMVE-NEVINPEGFYNY 976
F+LT+G I G S ++ +A L+CS G+ + C GR+GK+++V+ + +IN +GFYNY
Sbjct: 1022 FNLTSGTVI---GSNVSEDARLAHALMCSHGSLFGCAGRVGKIRLVDASGIINSDGFYNY 1078
Query: 975 LTGWFNVDNMMYYVSQASFYPTPPGWEYNEKLAK-VVPAAEPLLYSQMPFYQNDLIDTPA 799
LT WFNVD+MMYYVSQASF+PTPP WE ++ + +PAAEPL YSQ+PFY L DT
Sbjct: 1079 LTAWFNVDHMMYYVSQASFFPTPPKWELSKNHTENFIPAAEPLAYSQIPFYLTGLTDTAV 1138
Query: 798 IVKMIEEIRATCEEYSERGLSNHPSGIAFTFWEQYLTLRWNLFQAICIIALAVFCVISIL 619
IV I++IR+ CE ++++GL N P GIAFTFWEQYL L NL QAI II ++VFCVIS+L
Sbjct: 1139 IVDAIKDIRSVCERFTDQGLPNFPQGIAFTFWEQYLFLTGNLMQAISIITISVFCVISVL 1198
Query: 618 MFNPWAATLIMCIVVITTIELGGFMGLMGIKMNPISAVTLICAVGIGVEFTAHVELAFLT 439
+FNPWAA +++CI+ I T EL GFMGL+GIK+NP+SAVTLI AVGIGVEFT HV ++FLT
Sbjct: 1199 LFNPWAALMVVCILGIMTCELAGFMGLVGIKLNPVSAVTLITAVGIGVEFTVHVVVSFLT 1258
Query: 438 ALGTIDQRLESCLQHMFVPVYHGAISTFLGVVMLVFSEFDFVVTYFFYTMTLLVALGVFN 259
ALGT QR S + +FVPV HG+ ST LG++ML FSEF+FVV YFF MT L+ +G+ N
Sbjct: 1259 ALGTRSQRTSSAVDRVFVPVIHGSFSTLLGILMLGFSEFEFVVKYFFIVMTALICIGIIN 1318
Query: 258 GLCVLPVILTLVGPKPELTPTDGSSVLPPPPPL-RQQYAEKSGG 130
GL +LPV+L+ GP+ E++PT G + L PPPL + + +SGG
Sbjct: 1319 GLILLPVLLSWFGPRREISPTGGKTTLTLPPPLPKNANSSRSGG 1362