Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= Y110A2AL_5
         (4176 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17537719|ref|NP_494383.1| patched family member (ptc-3) [Caen...  2665   0.0
gi|17537717|ref|NP_494384.1| patched family member (ptc-3) [Caen...  2654   0.0
gi|39584667|emb|CAE72420.1| Hypothetical protein CBG19582 [Caeno...  2315   0.0
gi|39597594|emb|CAE59824.1| Hypothetical protein CBG03294 [Caeno...  1130   0.0
gi|17535373|ref|NP_495662.1| patched family member (ptc-1) [Caen...  1125   0.0
gi|17535375|ref|NP_495218.1| patched family member (ptc-2) [Caen...   565   e-159
gi|47506910|gb|AAH70995.1| Unknown (protein for MGC:79874) [Xeno...   520   e-146
gi|11463863|dbj|BAB18575.1| patched-2 [Xenopus laevis]                520   e-145
gi|48139426|ref|XP_397007.1| similar to putative hedgehog recept...   499   e-139
gi|4588015|gb|AAD25953.1| patched 2 [Homo sapiens]                    471   e-131
gi|4325111|gb|AAD17260.1| patched 2 [Homo sapiens]                    469   e-130
gi|3929235|gb|AAC79847.1| receptor protein patched 2 [Homo sapie...   469   e-130
gi|22538486|ref|NP_003729.2| patched 2; patched (Drosophila) hom...   469   e-130
gi|12643356|sp|Q9Y6C5|PTC2_HUMAN Patched protein homolog 2 (PTC2...   469   e-130
gi|37182233|gb|AAQ88919.1| Patched 2 [Homo sapiens]                   469   e-130
gi|6679517|ref|NP_032984.1| patched homolog 2 [Mus musculus] >gn...   463   e-128
gi|4883640|gb|AAD31595.1| putative hedgehog receptor [Junonia co...   461   e-128
gi|24586628|ref|NP_523661.2| CG2411-PA [Drosophila melanogaster]...   427   e-117
gi|552099|gb|AAA28696.1| membrane protein                             426   e-117
gi|85054|pir||S06119 membrane protein patched - fruit fly (Droso...   417   e-115
gi|226505|prf||1515355A patched gene                                  416   e-114
gi|4539024|emb|CAB39726.1| patched-2 protein [Danio rerio]            347   1e-93
gi|39930495|ref|NP_446018.1| patched (Drosophila) homolog [Rattu...   347   2e-93
gi|6679519|ref|NP_032983.1| patched; Patched 1; mesenchymal dysp...   344   9e-93
gi|4506247|ref|NP_000255.1| patched; patched (Drosophila) homolo...   343   3e-92
gi|13434992|dbj|BAB18574.2| patched-1 [Xenopus laevis]                340   2e-91
gi|13194564|gb|AAK15463.1| patched-1 [Xenopus laevis]                 340   2e-91
gi|45384440|ref|NP_990291.1| patched protein [Gallus gallus] >gn...   339   4e-91
gi|1335864|gb|AAC50496.1| patched gene homolog; similar to Droso...   337   1e-90
gi|18859285|ref|NP_571063.1| patched1; etID309849.2 [Danio rerio...   316   3e-84
gi|47228251|emb|CAG07646.1| unnamed protein product [Tetraodon n...   315   8e-84
gi|15426026|gb|AAK97655.1| patched 2 [Gallus gallus]                  276   3e-72
gi|34873568|ref|XP_214413.2| similar to patched [Rattus norvegicus]   276   4e-72
gi|31227677|ref|XP_317925.1| ENSANGP00000011383 [Anopheles gambi...   276   4e-72
gi|47212609|emb|CAF93285.1| unnamed protein product [Tetraodon n...   274   1e-71
gi|50751494|ref|XP_422426.1| PREDICTED: similar to patched 2 [Ga...   211   1e-52
gi|38489135|gb|AAR21239.1| patched [Homo sapiens]                     189   5e-46
gi|4092050|gb|AAC99398.1| patched [Rattus norvegicus]                 187   2e-45
gi|6694422|gb|AAF25228.1| NPC1 protein [Dictyostelium discoideum...   159   4e-37
gi|34870361|ref|XP_345571.1| similar to putative twelve transmem...   158   1e-36
gi|31223553|ref|XP_317322.1| ENSANGP00000010415 [Anopheles gambi...   147   3e-33
gi|50258193|gb|EAL20887.1| hypothetical protein CNBE2480 [Crypto...   139   6e-31
gi|49069812|ref|XP_399195.1| hypothetical protein UM01580.1 [Ust...   132   5e-29
gi|49088982|ref|XP_406256.1| hypothetical protein AN2119.2 [Aspe...   129   6e-28
gi|21105763|gb|AAM34780.1| patched [Equus caballus]                   114   3e-23
gi|47198640|emb|CAG14178.1| unnamed protein product [Tetraodon n...   109   6e-22
gi|38489136|gb|AAR21240.1| patched [Homo sapiens]                     109   6e-22
gi|39580224|emb|CAE72980.1| Hypothetical protein CBG20322 [Caeno...   105   7e-21
gi|12034662|gb|AAG45954.1| patched-1 [Xenopus laevis]                 103   4e-20
gi|28175594|gb|AAH43542.1| Unknown (protein for IMAGE:5170834) [...   102   1e-19
gi|47228003|emb|CAF97632.1| unnamed protein product [Tetraodon n...   101   1e-19
gi|47523702|ref|NP_999487.1| Niemann-Pick C disease protein [Sus...   100   2e-19
gi|20531740|gb|AAM27450.1| mutant Niemann-Pick C1 [Felis catus]       100   3e-19
gi|20531742|gb|AAM27451.1| Niemann-Pick C1 [Felis catus]              100   3e-19
gi|8099648|gb|AAF72187.1| Niemann-Pick type C1 disease protein; ...   100   3e-19
gi|50732655|ref|XP_425978.1| PREDICTED: similar to CG11212-PA [G...   100   5e-19
gi|47223010|emb|CAG07097.1| unnamed protein product [Tetraodon n...    99   7e-19
gi|50737130|ref|XP_419162.1| PREDICTED: similar to Niemann-Pick ...    99   1e-18
gi|4557803|ref|NP_000262.1| Niemann-Pick disease, type C1 [Homo ...    99   1e-18
gi|38649260|gb|AAH63302.1| Niemann-Pick disease, type C1 [Homo s...    99   1e-18
gi|7497280|pir||T28706 hypothetical protein C41D7.2 - Caenorhabd...    98   2e-18
gi|17535381|ref|NP_493718.1| PaTched Related (ptr-3) [Caenorhabd...    98   2e-18
gi|27807461|ref|NP_777183.1| Niemann-Pick disease, type C1 [Bos ...    98   2e-18
gi|39596845|emb|CAE59072.1| Hypothetical protein CBG02358 [Caeno...    97   3e-18
gi|17535383|ref|NP_494986.1| PaTched Related (ptr-6) [Caenorhabd...    97   4e-18
gi|31203089|ref|XP_310493.1| ENSANGP00000007352 [Anopheles gambi...    96   6e-18
gi|6581072|gb|AAF18444.1| Niemann-Pick type C1 disease protein [...    96   7e-18
gi|24583258|ref|NP_609357.2| CG5722-PA [Drosophila melanogaster]...    96   7e-18
gi|33589358|gb|AAQ22446.1| RE56428p [Drosophila melanogaster]          96   7e-18
gi|5921280|emb|CAB56505.1| NPC1 protein [Drosophila melanogaster]      96   7e-18
gi|12322632|gb|AAG51318.1| unknown protein, 5' partial [Arabidop...    96   1e-17
gi|11878263|gb|AAG40873.1| Niemann-Pick type C1 disease protein ...    95   1e-17
gi|30851359|gb|AAH52437.1| Niemann Pick type C1 [Mus musculus] >...    95   1e-17
gi|6679104|ref|NP_032746.1| Niemann Pick type C1; sphingomyelino...    95   1e-17
gi|48140454|ref|XP_397117.1| similar to CG11212-PA [Apis mellifera]    95   2e-17
gi|24643595|ref|NP_608417.1| CG12092-PA [Drosophila melanogaster...    94   4e-17
gi|6225893|sp|O42334|PTC2_CYNPY Patched protein homolog 2 (PTC2)...    93   5e-17
gi|38345936|emb|CAD41413.2| OSJNBb0078D11.11 [Oryza sativa (japo...    93   5e-17
gi|45550365|ref|NP_610209.2| CG11212-PA [Drosophila melanogaster...    93   5e-17
gi|6934272|gb|AAF31692.1| Niemann-Pick type C1 protein [Cricetul...    93   6e-17
gi|17508515|ref|NP_491221.1| PaTched Related (104.4 kD) (ptr-2) ...    93   6e-17
gi|39594547|emb|CAE72125.1| Hypothetical protein CBG19221 [Caeno...    92   1e-16
gi|17562808|ref|NP_505380.1| PaTched Related (ptr-1) [Caenorhabd...    91   2e-16
gi|17508519|ref|NP_490687.1| PaTched Related (90.7 kD) (ptr-11) ...    90   4e-16
gi|48096803|ref|XP_392524.1| similar to ENSANGP00000010415 [Apis...    90   4e-16
gi|46227691|gb|EAK88611.1| putative patched family protein with ...    89   7e-16
gi|17569155|ref|NP_510472.1| abnormal DAuer Formation DAF-6, PaT...    89   1e-15
gi|39596623|emb|CAE63242.1| Hypothetical protein CBG07607 [Caeno...    89   1e-15
gi|39585870|emb|CAE61284.1| Hypothetical protein CBG05104 [Caeno...    87   3e-15
gi|32405592|ref|XP_323409.1| hypothetical protein [Neurospora cr...    87   4e-15
gi|50300485|ref|NP_001002025.1| NPC1 (Niemann-Pick disease, type...    87   4e-15
gi|7485950|pir||T05663 hypothetical protein F22I13.120 - Arabido...    86   6e-15
gi|42567506|ref|NP_195548.2| patched family protein [Arabidopsis...    86   1e-14
gi|39586255|emb|CAE66666.1| Hypothetical protein CBG12004 [Caeno...    85   1e-14
gi|20857246|ref|XP_137497.1| similar to NPC1 (Niemann-Pick disea...    85   1e-14
gi|46402233|ref|NP_997125.1| NPC1 (Niemann-Pick disease, type C1...    85   1e-14
gi|32698450|emb|CAA22312.2| Hypothetical protein Y18D10A.7 [Caen...    85   2e-14
gi|17508523|ref|NP_493245.1| PaTched Related (ptr-17) [Caenorhab...    85   2e-14
gi|7019469|ref|NP_037521.1| NPC1 (Niemann-Pick disease, type C1,...    84   2e-14
gi|41350387|gb|AAR97886.1| Niemann-Pick C1-like 1 [Homo sapiens]...    84   2e-14
gi|12853786|dbj|BAB29848.1| unnamed protein product [Mus musculus]     84   4e-14
gi|38092633|ref|XP_109751.2| RIKEN cDNA 4930451E13 [Mus musculus]      84   4e-14
gi|31205209|ref|XP_311553.1| ENSANGP00000010114 [Anopheles gambi...    83   5e-14
gi|50420269|ref|XP_458667.1| unnamed protein product [Debaryomyc...    83   5e-14
gi|47210139|emb|CAF91283.1| unnamed protein product [Tetraodon n...    83   5e-14
gi|23613434|ref|NP_703278.1| patched family protein, putative [P...    83   5e-14
gi|39592388|emb|CAE63465.1| Hypothetical protein CBG07932 [Caeno...    82   1e-13
gi|6225891|sp|O42335|PTC1_CYNPY Patched protein homolog 1 (PTC1)...    82   1e-13
gi|38102306|gb|EAA49161.1| hypothetical protein MG00819.4 [Magna...    82   1e-13
gi|31242457|ref|XP_321659.1| ENSANGP00000011713 [Anopheles gambi...    81   2e-13
gi|46134229|ref|XP_389430.1| hypothetical protein FG09254.1 [Gib...    80   3e-13
gi|50549181|ref|XP_502061.1| hypothetical protein [Yarrowia lipo...    80   4e-13
gi|39598248|emb|CAE68940.1| Hypothetical protein CBG14920 [Caeno...    80   5e-13
gi|42562545|ref|NP_174975.2| patched family protein [Arabidopsis...    80   5e-13
gi|39596050|emb|CAE69686.1| Hypothetical protein CBG15941 [Caeno...    80   5e-13
gi|7504317|pir||T29590 hypothetical protein F55F8.1 - Caenorhabd...    79   9e-13
gi|50058060|gb|AAB37812.3| Patched related family protein 10 [Ca...    79   9e-13
gi|17508517|ref|NP_491658.1| PaTched Related (ptr-10) [Caenorhab...    79   9e-13
gi|39591824|emb|CAE71402.1| Hypothetical protein CBG18310 [Caeno...    79   1e-12
gi|6841051|gb|AAF28875.1| Niemann-Pick C1 disease protein [Homo ...    78   2e-12
gi|17554416|ref|NP_499380.1| PaTched Related (ptr-19) [Caenorhab...    78   2e-12
gi|6325251|ref|NP_015319.1| A transmembrane glycoprotein that is...    77   5e-12
gi|48094409|ref|XP_394168.1| similar to ENSANGP00000011713 [Apis...    76   6e-12
gi|39588499|emb|CAE58022.1| Hypothetical protein CBG01094 [Caeno...    76   6e-12
gi|7497872|pir||T25657 hypothetical protein C53C11.3 - Caenorhab...    76   6e-12
gi|50293501|ref|XP_449162.1| unnamed protein product [Candida gl...    76   8e-12
gi|25147623|ref|NP_510810.2| PaTched Related (ptr-5) [Caenorhabd...    75   1e-11
gi|31746661|gb|AAB42308.4| Patched related family protein 5 [Cae...    75   1e-11
gi|38422462|emb|CAA21636.2| Hypothetical protein Y38F1A.3 [Caeno...    75   2e-11
gi|17535389|ref|NP_496761.1| PaTched Related (90.8 kD) (ptr-18) ...    75   2e-11
gi|17562812|ref|NP_503388.1| PaTched Related (ptr-16) [Caenorhab...    74   2e-11
gi|41149372|ref|XP_370541.1| similar to PaTched Related (104.4 k...    74   3e-11
gi|17562814|ref|NP_507690.1| PaTched Related (ptr-22) [Caenorhab...    73   7e-11
gi|34532356|dbj|BAC86399.1| unnamed protein product [Homo sapiens]     72   1e-10
gi|39597175|emb|CAE59402.1| Hypothetical protein CBG02766 [Caeno...    72   1e-10
gi|48094777|ref|XP_394262.1| similar to ENSANGP00000011713 [Apis...    72   1e-10
gi|39581855|emb|CAE60748.1| Hypothetical protein CBG04434 [Caeno...    71   3e-10
gi|39586853|emb|CAE62788.1| Hypothetical protein CBG06961 [Caeno...    70   3e-10
gi|17562810|ref|NP_504760.1| PaTched Related (ptr-15) [Caenorhab...    69   7e-10
gi|17541728|ref|NP_501963.1| PaTched Related (ptr-14) [Caenorhab...    69   7e-10
gi|17508527|ref|NP_493603.1| PaTched Related (111.8 kD) (ptr-23)...    68   2e-09
gi|23478744|gb|EAA15748.1| Drosophila melanogaster CG11212 gene ...    68   2e-09
gi|17533389|ref|NP_495217.1| predicted CDS, putative cytoplasmic...    67   3e-09
gi|25147620|ref|NP_509013.2| PaTched Related (110.8 kD) (ptr-4) ...    67   4e-09
gi|39597497|emb|CAE59727.1| Hypothetical protein CBG03163 [Caeno...    66   8e-09
gi|17535391|ref|NP_497114.1| PaTched Related (ptr-20) [Caenorhab...    66   8e-09
gi|46436645|gb|EAK96004.1| hypothetical protein CaO19.7242 [Cand...    66   8e-09
gi|17535387|ref|NP_496392.1| PaTched Related (ptr-13) [Caenorhab...    65   1e-08
gi|39597328|emb|CAE59556.1| Hypothetical protein CBG02953 [Caeno...    65   2e-08
gi|39598167|emb|CAE68859.1| Hypothetical protein CBG14821 [Caeno...    64   2e-08
gi|39594536|emb|CAE72114.1| Hypothetical protein CBG19208 [Caeno...    64   4e-08
gi|39594397|emb|CAE71975.1| Hypothetical protein CBG19049 [Caeno...    64   4e-08
gi|45201088|ref|NP_986658.1| AGL008Wp [Eremothecium gossypii] >g...    63   5e-08
gi|50312503|ref|XP_456287.1| unnamed protein product [Kluyveromy...    62   9e-08
gi|39584430|emb|CAE72568.1| Hypothetical protein CBG19753 [Caeno...    62   1e-07
gi|39594070|emb|CAE70180.1| Hypothetical protein CBG16653 [Caeno...    61   3e-07
gi|39597909|emb|CAE68601.1| Hypothetical protein CBG14473 [Caeno...    60   3e-07
gi|17569119|ref|NP_508771.1| Niemann-Pick (human disease) type C...    60   6e-07
gi|7498484|pir||T15961 hypothetical protein F02E8.6 - Caenorhabd...    60   6e-07
gi|39585014|emb|CAE62665.1| Hypothetical protein CBG06803 [Caeno...    59   8e-07
gi|42525985|ref|NP_971083.1| membrane protein, putative [Trepone...    59   1e-06
gi|17508525|ref|NP_490751.1| PaTched Related (ptr-21) [Caenorhab...    59   1e-06
gi|39585878|emb|CAE61292.1| Hypothetical protein CBG05116 [Caeno...    58   2e-06
gi|39595501|emb|CAE60539.1| Hypothetical protein CBG04166 [Caeno...    58   2e-06
gi|48060436|gb|AAF39911.3| Patched related family protein 12 [Ca...    58   2e-06
gi|25143167|ref|NP_491005.2| PaTched Related (ptr-12) [Caenorhab...    58   2e-06
gi|17554358|ref|NP_498813.1| Niemann-Pick (human disease) type C...    57   4e-06
gi|46228654|gb|EAK89524.1| niemann-Pick type C1 disease protein/...    57   5e-06
gi|630596|pir||S44795 F09G8.3 protein - Caenorhabditis elegans         56   6e-06
gi|28804827|dbj|BAC57975.1| patched [Paralichthys olivaceus]           56   8e-06
gi|17535385|ref|NP_496343.1| PaTched Related (ptr-8) [Caenorhabd...    56   8e-06
gi|39591183|emb|CAE73236.1| Hypothetical protein CBG20645 [Caeno...    55   1e-05
gi|17368397|sp|P97260|SCAP_CRIGR Sterol regulatory element bindi...    54   3e-05
gi|6691199|gb|AAF24537.1| F7F22.1 [Arabidopsis thaliana]               54   3e-05
gi|49257414|gb|AAH72950.1| Unknown (protein for IMAGE:4888068) [...    53   7e-05
gi|50510409|dbj|BAD32190.1| mKIAA0199 protein [Mus musculus]           53   7e-05
gi|47564088|ref|NP_001001144.1| SREBP cleavage activating protei...    53   7e-05
gi|23593606|ref|XP_135190.2| similar to SREBP cleavage activatin...    53   7e-05
gi|50776258|ref|XP_427309.1| PREDICTED: similar to patched 2, pa...    53   7e-05
gi|15644049|ref|NP_229098.1| conserved hypothetical protein [The...    52   9e-05
gi|48854362|ref|ZP_00308525.1| COG1033: Predicted exporters of t...    52   9e-05
gi|34189617|gb|AAH27207.1| SCAP protein [Homo sapiens]                 52   1e-04
gi|30923298|sp|Q12770|SCAP_HUMAN Sterol regulatory element bindi...    52   1e-04
gi|42528204|ref|NP_973302.1| membrane protein, putative [Trepone...    52   1e-04
gi|20521844|dbj|BAA12111.2| the KIAA0199 gene is expressed ubiqu...    52   1e-04
gi|49071804|ref|XP_400191.1| hypothetical protein UM02576.1 [Ust...    52   2e-04
gi|34866374|ref|XP_217279.2| similar to SREBP cleavage activatin...    52   2e-04
gi|31200733|ref|XP_309314.1| ENSANGP00000018415 [Anopheles gambi...    52   2e-04
gi|8037588|gb|AAF71402.1| TRA-2A [Caenorhabditis remanei]              52   2e-04
gi|17554414|ref|NP_499030.1| PaTched Related (ptr-9) [Caenorhabd...    51   3e-04
gi|15792696|ref|NP_282519.1| putative integral membrane protein ...    50   4e-04
gi|2499021|sp|Q17307|TRA2_CAEBR SEX-DETERMINING TRANSFORMER PROT...    50   6e-04
gi|39590265|emb|CAE66003.1| Hypothetical protein CBG11194 [Caeno...    50   6e-04
gi|50759451|ref|XP_417651.1| PREDICTED: similar to KIAA1337 prot...    49   8e-04
gi|38079042|ref|XP_144125.3| similar to hypothetical protein [Mu...    49   0.001
gi|15669757|ref|NP_248570.1| M. jannaschii predicted coding regi...    49   0.001
gi|48140791|ref|XP_397156.1| similar to CG11212-PA [Apis mellifera]    49   0.001
gi|7206596|gb|AAF39756.1| Transformer : xx animals transformed i...    49   0.001
gi|48861733|ref|ZP_00315633.1| COG1033: Predicted exporters of t...    49   0.001
gi|17536595|ref|NP_495426.1| membrane protein mediating cell com...    49   0.001
gi|48733450|ref|ZP_00267193.1| COG1033: Predicted exporters of t...    48   0.002
gi|28573975|ref|NP_788277.1| CG33131-PA [Drosophila melanogaster...    48   0.002
gi|20378357|gb|AAM20923.1| ER-golgi escort protein [Drosophila m...    48   0.002
gi|49117492|gb|AAH72569.1| Unknown (protein for MGC:99434) [Mus ...    47   0.003
gi|47124351|gb|AAH70441.1| RIKEN cDNA G630052C06 gene [Mus muscu...    47   0.003
gi|34872467|ref|XP_233671.2| similar to KIAA1337 protein [Rattus...    47   0.003
gi|50510889|dbj|BAD32430.1| mKIAA1337 protein [Mus musculus]           47   0.003
gi|28870932|ref|NP_793551.1| membrane protein, putative [Pseudom...    47   0.004
gi|6643038|gb|AAF20397.1| truncated Niemann-Pick C1-like protein...    46   0.007
gi|33620877|gb|AAG24025.2| Dispatched family protein 2 [Caenorha...    46   0.007
gi|17562806|ref|NP_505396.1| disPaTchED family member (ptd-2) [C...    46   0.007
gi|30314823|emb|CAD70191.1| hypothetical protein [Pseudomonas sy...    46   0.009
gi|28900326|ref|NP_799981.1| putative multidrug efflux membrane ...    46   0.009
gi|39594563|emb|CAE72141.1| Hypothetical protein CBG19239 [Caeno...    45   0.011
gi|5834578|emb|CAB55303.1| hypothetical protein [Homo sapiens]         45   0.015
gi|17508513|ref|NP_491673.1| disPaTchED family member, sterol-se...    45   0.015
gi|31208109|ref|XP_313021.1| ENSANGP00000011300 [Anopheles gambi...    45   0.015
gi|7504454|pir||T33156 hypothetical protein F56H1.1 - Caenorhabd...    45   0.015
gi|7243055|dbj|BAA92575.1| KIAA1337 protein [Homo sapiens]             45   0.015
gi|42655636|ref|XP_052561.5| KIAA1337 protein [Homo sapiens]           45   0.015
gi|50740212|ref|XP_419396.1| PREDICTED: similar to dispatched A ...    45   0.019
gi|26988744|ref|NP_744169.1| membrane protein, putative [Pseudom...    45   0.019
gi|29345715|ref|NP_809218.1| putative aminoglycoside efflux pump...    45   0.019
gi|15607343|ref|NP_214716.1| mmpL11 [Mycobacterium tuberculosis ...    45   0.019
gi|23469211|ref|ZP_00124546.1| COG1033: Predicted exporters of t...    44   0.025
gi|48731390|ref|ZP_00265135.1| COG1033: Predicted exporters of t...    44   0.043
gi|38489134|gb|AAR21238.1| patched [Homo sapiens]                      44   0.043
gi|47086441|ref|NP_997965.1| dispatched homolog 1 [Danio rerio] ...    43   0.056
gi|15594597|ref|NP_212386.1| conserved hypothetical integral mem...    43   0.056
gi|45358585|ref|NP_988142.1| conserved hypothetical protein [Met...    43   0.056
gi|46314765|ref|ZP_00215350.1| COG1033: Predicted exporters of t...    43   0.073
gi|46916735|emb|CAG23498.1| putative multidrug efflux RND transp...    42   0.096
gi|27695402|gb|AAH43102.1| Disp1-pending protein [Mus musculus] ...    42   0.096
gi|24375858|ref|NP_719901.1| membrane protein, putative [Shewane...    42   0.096
gi|24762223|ref|NP_081142.1| dispatched homolog 1; dispatched A;...    42   0.096
gi|26983974|gb|AAN64660.1| dispatched [Mus musculus]                   42   0.096
gi|23092587|gb|AAN08631.1| DISP1 [Mus musculus]                        42   0.096
gi|46126145|ref|XP_387626.1| hypothetical protein FG07450.1 [Gib...    42   0.13
gi|15639777|ref|NP_219227.1| antibiotic transport protein, putat...    42   0.13
gi|14521877|ref|NP_127353.1| Transport protein [Pyrococcus abyss...    42   0.16
gi|24374998|ref|NP_719041.1| RND multidrug efflux transporter Me...    42   0.16
gi|48863979|ref|ZP_00317872.1| COG1033: Predicted exporters of t...    42   0.16
gi|630597|pir||S44797 F09G8.4 protein - Caenorhabditis elegans         42   0.16
gi|30348887|gb|AAN28930.1| putative RND family efflux protein P1...    41   0.21
gi|6683905|gb|AAF23397.1| Dispatched [Drosophila melanogaster]         41   0.21
gi|24644456|ref|NP_524734.2| CG2019-PA [Drosophila melanogaster]...    41   0.21
gi|18447307|gb|AAL68228.1| LD27661p [Drosophila melanogaster]          41   0.21
gi|48831706|ref|ZP_00288761.1| COG1033: Predicted exporters of t...    41   0.21
gi|39580631|emb|CAE72907.1| Hypothetical protein CBG20225 [Caeno...    41   0.28
gi|15598275|ref|NP_251769.1| hypothetical protein [Pseudomonas a...    41   0.28
gi|46164017|ref|ZP_00136444.2| COG1033: Predicted exporters of t...    41   0.28
gi|48844829|ref|ZP_00299125.1| COG1033: Predicted exporters of t...    41   0.28
gi|48782221|ref|ZP_00278773.1| COG1033: Predicted exporters of t...    40   0.36
gi|32404728|ref|XP_322977.1| related to SREBP cleavage activatin...    40   0.36
gi|30248183|ref|NP_840253.1| probable transmembrane multidrug-ef...    40   0.36
gi|32564619|ref|NP_495989.2| SREBP Cleavage activating Protein h...    40   0.36
gi|7498176|pir||T20342 hypothetical protein D2013.8 - Caenorhabd...    40   0.36
gi|16415986|emb|CAB88621.2| related to SREBP cleavage activating...    40   0.36
gi|46130473|ref|ZP_00165349.2| COG0841: Cation/multidrug efflux ...    40   0.48
gi|46581650|ref|YP_012458.1| AcrB/AcrD/AcrF family protein [Desu...    40   0.62
gi|27735091|ref|NP_775766.1| hypothetical protein FLJ30296 [Homo...    40   0.62
gi|46316572|ref|ZP_00217151.1| COG0841: Cation/multidrug efflux ...    40   0.62
gi|47572884|ref|ZP_00242925.1| COG1033: Predicted exporters of t...    40   0.62
gi|48927356|emb|CAG34265.1| RND protein [Stenotrophomonas maltop...    39   0.81
gi|11071584|emb|CAC14595.1| putative RND protein [Stenotrophomon...    39   0.81
gi|48927366|emb|CAG34257.1| RND protein [Stenotrophomonas maltop...    39   0.81
gi|25952134|ref|NP_116279.2| dispatched A [Homo sapiens]               39   1.1
gi|10438861|dbj|BAB15365.1| unnamed protein product [Homo sapiens]     39   1.1
gi|46314036|ref|ZP_00214623.1| COG0841: Cation/multidrug efflux ...    39   1.1
gi|48927349|emb|CAG34250.1| RND protein [Stenotrophomonas maltop...    39   1.1
gi|10435677|dbj|BAB14637.1| unnamed protein product [Homo sapiens]     39   1.1
gi|29347662|ref|NP_811165.1| multidrug efflux membrane fusion pr...    39   1.1
gi|15602997|ref|NP_246069.1| AcrB [Pasteurella multocida Pm70] >...    39   1.1
gi|12698403|gb|AAK01517.1| transport protein [Pseudomonas aerugi...    39   1.1
gi|46912011|emb|CAG18806.1| hypothetical protein [Photobacterium...    39   1.1
gi|5764625|gb|AAD51345.1| SmeB [Stenotrophomonas maltophilia]          39   1.1
gi|21242235|ref|NP_641817.1| RND multidrug efflux transporter Me...    39   1.1
gi|11360045|pir||T42693 hypothetical protein DKFZp434I0428.1 - h...    39   1.1
gi|37932672|gb|AAP43110.1| OqxB [Escherichia coli]                     39   1.1
gi|48257180|gb|AAH11542.2| Unknown (protein for IMAGE:3855477) [...    39   1.1
gi|14590211|ref|NP_142276.1| hypothetical protein PH0287 [Pyroco...    38   1.8
gi|26989531|ref|NP_744956.1| transporter, putative [Pseudomonas ...    38   2.4
gi|4996614|dbj|BAA78559.1| protein-export membrane protein [Prev...    38   2.4
gi|20069235|gb|AAM09741.1| tra-2 [Caenorhabditis remanei]              38   2.4
gi|20069239|gb|AAM09743.1| tra-2 [Caenorhabditis remanei]              38   2.4
gi|20069223|gb|AAM09735.1| tra-2 [Caenorhabditis remanei]              38   2.4
gi|20069229|gb|AAM09738.1| tra-2 [Caenorhabditis remanei]              38   2.4
gi|20069221|gb|AAM09734.1| tra-2 [Caenorhabditis remanei]              38   2.4
gi|20069233|gb|AAM09740.1| tra-2 [Caenorhabditis remanei]              38   2.4
gi|20069241|gb|AAM09744.1| tra-2 [Caenorhabditis remanei]              38   2.4
gi|20069231|gb|AAM09739.1| tra-2 [Caenorhabditis remanei]              38   2.4
gi|20069227|gb|AAM09737.1| tra-2 [Caenorhabditis remanei]              38   2.4
gi|20069237|gb|AAM09742.1| tra-2 [Caenorhabditis remanei]              38   2.4
gi|41409735|ref|NP_962571.1| MmpL11 [Mycobacterium avium subsp. ...    37   3.1
gi|45170565|gb|AAO18187.2| putative resistance-nodulation cell d...    37   3.1
gi|46916631|emb|CAG23396.1| Hypothetical integral membrane prote...    37   3.1
gi|42523286|ref|NP_968666.1| NolG efflux transporter [Bdellovibr...    37   3.1
gi|17230624|ref|NP_487172.1| ABC transport protein, ATP-binding ...    37   3.1
gi|50730194|ref|XP_425565.1| PREDICTED: similar to hypothetical ...    37   3.1
gi|11498071|ref|NP_069295.1| conserved hypothetical protein [Arc...    37   3.1
gi|15792360|ref|NP_282183.1| putative integral membrane componen...    37   3.1
gi|6691424|ref|NP_033639.1|ND2_15157 NADH dehydrogenase subunit ...    37   3.1
gi|38050533|ref|XP_138082.2| similar to hypothetical protein [Mu...    37   4.0
gi|34495889|ref|NP_900104.1| acriflavin resistance protein D [Ch...    37   4.0
gi|6324153|ref|NP_014223.1| Hypothetical ORF; Ynl176cp [Saccharo...    37   4.0
gi|46201799|ref|ZP_00208252.1| COG1033: Predicted exporters of t...    37   4.0
gi|48782777|ref|ZP_00279257.1| COG0841: Cation/multidrug efflux ...    37   4.0
gi|39595886|emb|CAE67389.1| Hypothetical protein CBG12874 [Caeno...    37   4.0
gi|21218965|ref|NP_624744.1| putative membrane transport protein...    37   4.0
gi|20069321|gb|AAM09783.1| TRA-2 [Caenorhabditis elegans]              37   4.0
gi|20069307|gb|AAM09776.1| TRA-2 [Caenorhabditis elegans]              37   4.0
gi|20069297|gb|AAM09771.1| TRA-2 [Caenorhabditis elegans] >gnl|B...    37   4.0
gi|20069331|gb|AAM09788.1| TRA-2 [Caenorhabditis elegans]              37   4.0
gi|20069333|gb|AAM09789.1| TRA-2 [Caenorhabditis elegans]              37   4.0
gi|20069305|gb|AAM09775.1| TRA-2 [Caenorhabditis elegans]              37   4.0
gi|20069299|gb|AAM09772.1| TRA-2 [Caenorhabditis elegans] >gnl|B...    37   4.0
gi|20069303|gb|AAM09774.1| TRA-2 [Caenorhabditis elegans]              37   4.0
gi|20069327|gb|AAM09786.1| TRA-2 [Caenorhabditis elegans]              37   4.0
gi|20069329|gb|AAM09787.1| TRA-2 [Caenorhabditis elegans]              37   4.0
gi|20069311|gb|AAM09778.1| TRA-2 [Caenorhabditis elegans]              37   4.0
gi|20069301|gb|AAM09773.1| TRA-2 [Caenorhabditis elegans]              37   4.0
gi|20069319|gb|AAM09782.1| TRA-2 [Caenorhabditis elegans]              37   4.0
gi|20069323|gb|AAM09784.1| TRA-2 [Caenorhabditis elegans]              37   4.0
gi|26331156|dbj|BAC29308.1| unnamed protein product [Mus musculus]     37   5.3
gi|50305435|ref|XP_452677.1| unnamed protein product [Kluyveromy...    37   5.3
gi|34880608|ref|XP_228985.2| similar to hypothetical protein FLJ...    37   5.3
gi|38086898|ref|XP_142262.3| similar to hypothetical protein FLJ...    37   5.3
gi|34881200|ref|XP_213964.2| similar to dispatched [Rattus norve...    37   5.3
gi|45514534|ref|ZP_00166092.1| COG1033: Predicted exporters of t...    37   5.3
gi|46319801|ref|ZP_00220200.1| COG0841: Cation/multidrug efflux ...    37   5.3
gi|18976634|ref|NP_577991.1| mfs transporter [Pyrococcus furiosu...    36   6.9
gi|39936021|ref|NP_948297.1| putative RND multidrug efflux trans...    36   6.9
gi|48782685|ref|ZP_00279191.1| COG1033: Predicted exporters of t...    36   6.9
gi|32491357|ref|NP_871611.1| kup [Wigglesworthia glossinidia end...    36   6.9
gi|17570553|ref|NP_508377.1| growth factor receptor (62.1 kD) (X...    36   6.9
gi|30249101|ref|NP_841171.1| RND multidrug efflux transporter [N...    36   6.9
gi|25990163|gb|AAN74869.1| patched-like protein [Gallus gallus] ...    36   6.9
gi|50257490|gb|EAL20195.1| hypothetical protein CNBF0070 [Crypto...    36   6.9
gi|21228954|ref|NP_634876.1| Membrane protein related to SecD/Se...    36   6.9
gi|48851350|ref|ZP_00305592.1| COG0841: Cation/multidrug efflux ...    36   9.0
gi|21220918|ref|NP_626697.1| putative integral membrane protein ...    36   9.0
gi|21233427|ref|NP_639344.1| membrane protein [Xanthomonas campe...    36   9.0
gi|48837151|ref|ZP_00294146.1| COG2409: Predicted drug exporters...    36   9.0
gi|22760211|dbj|BAC11106.1| unnamed protein product [Homo sapiens]     36   9.0
gi|39596750|emb|CAE63369.1| Hypothetical protein CBG07780 [Caeno...    36   9.0
gi|20069160|gb|AAM09705.1| tra-2 [Caenorhabditis briggsae] >gnl|...    36   9.0
gi|20069158|gb|AAM09704.1| tra-2 [Caenorhabditis briggsae] >gnl|...    36   9.0


>gi|17537719|ref|NP_494383.1| patched family member (ptc-3)
            [Caenorhabditis elegans]
 gi|15668169|gb|AAL05588.1| Patched family protein 3, isoform b
            [Caenorhabditis elegans]
          Length = 1391

 Score = 2665 bits (6909), Expect = 0.0
 Identities = 1322/1391 (95%), Positives = 1322/1391 (95%)
 Frame = -1

Query: 4176 MSFPDEETDLLSEAKHCIRNVIHRTHRKFLENRLIGNFDSEDFSDAWKKKFAHAPTWCDA 3997
            MSFPDEETDLLSEAKHCIRNVIHRTHRKFLENRLIGNFDSEDFSDAWKKKFAHAPTWCDA
Sbjct: 1    MSFPDEETDLLSEAKHCIRNVIHRTHRKFLENRLIGNFDSEDFSDAWKKKFAHAPTWCDA 60

Query: 3996 DMSLQQIKRGKAVGNTVALTARAFFQLWLFRIGCFVQRWAWSTIFISHYGAHFEAPDLQN 3817
            DMSLQQIKRGKAVGNTVALTARAFFQLWLFRIGCFVQRWAWSTIFISHYGAHFEAPDLQN
Sbjct: 61   DMSLQQIKRGKAVGNTVALTARAFFQLWLFRIGCFVQRWAWSTIFISHYGAHFEAPDLQN 120

Query: 3816 PNSMSISSLFLYCLCLGGLRHVTIETDLVKLWVSEGGRLNEEMGYLGQVKFERESGHLVH 3637
            PNSMSISSLFLYCLCLGGLRHVTIETDLVKLWVSEGGRLNEEMGYLGQVKFERESGHLVH
Sbjct: 121  PNSMSISSLFLYCLCLGGLRHVTIETDLVKLWVSEGGRLNEEMGYLGQVKFERESGHLVH 180

Query: 3636 KVKRAVEQTTEPPAPAVKAEVRRGPELPKENGLGGGFQVVIQTPSFDGQNILSKEALQQH 3457
            KVKRAVEQTTEPPAPAVKAEVRRGPELPKENGLGGGFQVVIQTPSFDGQNILSKEALQQH
Sbjct: 181  KVKRAVEQTTEPPAPAVKAEVRRGPELPKENGLGGGFQVVIQTPSFDGQNILSKEALQQH 240

Query: 3456 TKLMEEISTYEVKMFNETWTLSDICFKPPGPSFNSGPLAGIMSKLLDKIIPCIWITPIDC 3277
            TKLMEEISTYEVKMFNETWTLSDICFKPPGPSFNSGPLAGIMSKLLDKIIPCIWITPIDC
Sbjct: 241  TKLMEEISTYEVKMFNETWTLSDICFKPPGPSFNSGPLAGIMSKLLDKIIPCIWITPIDC 300

Query: 3276 YWDGAKXXXXXXXXXXXPEVASFVSSLPPGNVTWKNLNPTSVIKEVGTLFDLGPIGNFFE 3097
            YWDGAK           PEVASFVSSLPPGNVTWKNLNPTSVIKEVGTLFDLGPIGNFFE
Sbjct: 301  YWDGAKPLGPNPPLNLGPEVASFVSSLPPGNVTWKNLNPTSVIKEVGTLFDLGPIGNFFE 360

Query: 3096 RAGIDGAYLDRPCIDPLEEECPKSAPNYFDRCHALTKFNEWNMAKAMSEQVTLERKIIPK 2917
            RAGIDGAYLDRPCIDPLEEECPKSAPNYFDRCHALTKFNEWNMAKAMSEQVTLERKIIPK
Sbjct: 361  RAGIDGAYLDRPCIDPLEEECPKSAPNYFDRCHALTKFNEWNMAKAMSEQVTLERKIIPK 420

Query: 2916 DDGKSDIAETILNDIFGKKRRKRQXXXXXXXXXXXXXXXXXXXXXXXXYLAGIANSTIAK 2737
            DDGKSDIAETILNDIFGKKRRKRQ                        YLAGIANSTIAK
Sbjct: 421  DDGKSDIAETILNDIFGKKRRKRQADTTTKKPATKKDEDYYEYEDDADYLAGIANSTIAK 480

Query: 2736 KNPEKEAKDLLCLEYGSSLLKWMQENPERLGEFLTKEEMPDYPNYGDVMTGGCKGFGKKI 2557
            KNPEKEAKDLLCLEYGSSLLKWMQENPERLGEFLTKEEMPDYPNYGDVMTGGCKGFGKKI
Sbjct: 481  KNPEKEAKDLLCLEYGSSLLKWMQENPERLGEFLTKEEMPDYPNYGDVMTGGCKGFGKKI 540

Query: 2556 MEWPEDLIIGGIQRDNGKLVSAEALQSVFLVSGAYDVFARIKNDKTDSHPGLDRHHFQPW 2377
            MEWPEDLIIGGIQRDNGKLVSAEALQSVFLVSGAYDVFARIKNDKTDSHPGLDRHHFQPW
Sbjct: 541  MEWPEDLIIGGIQRDNGKLVSAEALQSVFLVSGAYDVFARIKNDKTDSHPGLDRHHFQPW 600

Query: 2376 MAGEIISTWQRNFTKRLYSHELNRERRQFHPLASTSIADMLEEFSQFNXXXXXXXXXXXX 2197
            MAGEIISTWQRNFTKRLYSHELNRERRQFHPLASTSIADMLEEFSQFN
Sbjct: 601  MAGEIISTWQRNFTKRLYSHELNRERRQFHPLASTSIADMLEEFSQFNYIIIVIGYILMV 660

Query: 2196 XYAAFTQGRFQGWWLAVQSNVALAICGVILVTISSICGLGFATHLGINFNAATTQVVPFL 2017
             YAAFTQGRFQGWWLAVQSNVALAICGVILVTISSICGLGFATHLGINFNAATTQVVPFL
Sbjct: 661  IYAAFTQGRFQGWWLAVQSNVALAICGVILVTISSICGLGFATHLGINFNAATTQVVPFL 720

Query: 2016 SLGLGIDDMFLLLHNYDEIINICNKNEIGVLLKETGMSVMLTSINNILAFISGYVLPIPA 1837
            SLGLGIDDMFLLLHNYDEIINICNKNEIGVLLKETGMSVMLTSINNILAFISGYVLPIPA
Sbjct: 721  SLGLGIDDMFLLLHNYDEIINICNKNEIGVLLKETGMSVMLTSINNILAFISGYVLPIPA 780

Query: 1836 LRSFCSQTAILLAFNLIFLMFIFPAMIGIDLRRQRKGKRDLAYCSRGNPQMATSQSVPSN 1657
            LRSFCSQTAILLAFNLIFLMFIFPAMIGIDLRRQRKGKRDLAYCSRGNPQMATSQSVPSN
Sbjct: 781  LRSFCSQTAILLAFNLIFLMFIFPAMIGIDLRRQRKGKRDLAYCSRGNPQMATSQSVPSN 840

Query: 1656 VSNNTQMSSRAELAGYEKQADEYKRHEPWYTVGGFLNKIYIPALKNNVVKACVLIGTTTA 1477
            VSNNTQMSSRAELAGYEKQADEYKRHEPWYTVGGFLNKIYIPALKNNVVKACVLIGTTTA
Sbjct: 841  VSNNTQMSSRAELAGYEKQADEYKRHEPWYTVGGFLNKIYIPALKNNVVKACVLIGTTTA 900

Query: 1476 VVFGLYGMYTSTLGLELADVLPEHTPPAAFLRAREQYFSFYPMFAVLRGDKLDIPNQQQL 1297
            VVFGLYGMYTSTLGLELADVLPEHTPPAAFLRAREQYFSFYPMFAVLRGDKLDIPNQQQL
Sbjct: 901  VVFGLYGMYTSTLGLELADVLPEHTPPAAFLRAREQYFSFYPMFAVLRGDKLDIPNQQQL 960

Query: 1296 IEEYRAQLGSSKFMIKAEGKLQPYWMSMLRVWLQSLDMALEKDLAAGKFDLTNGNPIKVN 1117
            IEEYRAQLGSSKFMIKAEGKLQPYWMSMLRVWLQSLDMALEKDLAAGKFDLTNGNPIKVN
Sbjct: 961  IEEYRAQLGSSKFMIKAEGKLQPYWMSMLRVWLQSLDMALEKDLAAGKFDLTNGNPIKVN 1020

Query: 1116 GEKPSPESMIAARLVCSFGTNYNCDGRLGKMKMVENEVINPEGFYNYLTGWFNVDNMMYY 937
            GEKPSPESMIAARLVCSFGTNYNCDGRLGKMKMVENEVINPEGFYNYLTGWFNVDNMMYY
Sbjct: 1021 GEKPSPESMIAARLVCSFGTNYNCDGRLGKMKMVENEVINPEGFYNYLTGWFNVDNMMYY 1080

Query: 936  VSQASFYPTPPGWEYNEKLAKVVPAAEPLLYSQMPFYQNDLIDTPAIVKMIEEIRATCEE 757
            VSQASFYPTPPGWEYNEKLAKVVPAAEPLLYSQMPFYQNDLIDTPAIVKMIEEIRATCEE
Sbjct: 1081 VSQASFYPTPPGWEYNEKLAKVVPAAEPLLYSQMPFYQNDLIDTPAIVKMIEEIRATCEE 1140

Query: 756  YSERGLSNHPSGIAFTFWEQYLTLRWNLFQAICIIALAVFCVISILMFNPWAATLIMCIV 577
            YSERGLSNHPSGIAFTFWEQYLTLRWNLFQAICIIALAVFCVISILMFNPWAATLIMCIV
Sbjct: 1141 YSERGLSNHPSGIAFTFWEQYLTLRWNLFQAICIIALAVFCVISILMFNPWAATLIMCIV 1200

Query: 576  VITTIELGGFMGLMGIKMNPISAVTLICAVGIGVEFTAHVELAFLTALGTIDQRLESCLQ 397
            VITTIELGGFMGLMGIKMNPISAVTLICAVGIGVEFTAHVELAFLTALGTIDQRLESCLQ
Sbjct: 1201 VITTIELGGFMGLMGIKMNPISAVTLICAVGIGVEFTAHVELAFLTALGTIDQRLESCLQ 1260

Query: 396  HMFVPVYHGAISTFLGVVMLVFSEFDFVVTYFFYTMTLLVALGVFNGLCVLPVILTLVGP 217
            HMFVPVYHGAISTFLGVVMLVFSEFDFVVTYFFYTMTLLVALGVFNGLCVLPVILTLVGP
Sbjct: 1261 HMFVPVYHGAISTFLGVVMLVFSEFDFVVTYFFYTMTLLVALGVFNGLCVLPVILTLVGP 1320

Query: 216  KPELTPTDGSSVLPPPPPLRQQYAEKSGGVEGGMRKRKEKRPAEVEMXXXXXXXXXXXXX 37
            KPELTPTDGSSVLPPPPPLRQQYAEKSGGVEGGMRKRKEKRPAEVEM
Sbjct: 1321 KPELTPTDGSSVLPPPPPLRQQYAEKSGGVEGGMRKRKEKRPAEVEMSARDSPSTSSASH 1380

Query: 36   XXXXXXXXAHK 4
                    AHK
Sbjct: 1381 SSDDESSPAHK 1391


>gi|17537717|ref|NP_494384.1| patched family member (ptc-3)
            [Caenorhabditis elegans]
 gi|7331717|gb|AAF60405.1| Patched family protein 3, isoform a
            [Caenorhabditis elegans]
          Length = 1388

 Score = 2654 bits (6879), Expect = 0.0
 Identities = 1319/1391 (94%), Positives = 1319/1391 (94%)
 Frame = -1

Query: 4176 MSFPDEETDLLSEAKHCIRNVIHRTHRKFLENRLIGNFDSEDFSDAWKKKFAHAPTWCDA 3997
            MSFPDEETDLLSEAKHCIRNVIHRTHRKFLENRLIGNFDSEDFSDAWKKKFAHAPTWCDA
Sbjct: 1    MSFPDEETDLLSEAKHCIRNVIHRTHRKFLENRLIGNFDSEDFSDAWKKKFAHAPTWCDA 60

Query: 3996 DMSLQQIKRGKAVGNTVALTARAFFQLWLFRIGCFVQRWAWSTIFISHYGAHFEAPDLQN 3817
            DMSLQQIKRGKAVGNTVALTARAFFQLWLFRIGCFVQRWAWSTIFISHYGAHFEAPDLQN
Sbjct: 61   DMSLQQIKRGKAVGNTVALTARAFFQLWLFRIGCFVQRWAWSTIFISHYGAHFEAPDLQN 120

Query: 3816 PNSMSISSLFLYCLCLGGLRHVTIETDLVKLWVSEGGRLNEEMGYLGQVKFERESGHLVH 3637
            PNSMSISSLFLYCLCLGGLRHVTIETDLVKLWVSEGGRLNEEMGYLGQVKFERESGHLVH
Sbjct: 121  PNSMSISSLFLYCLCLGGLRHVTIETDLVKLWVSEGGRLNEEMGYLGQVKFERESGHLVH 180

Query: 3636 KVKRAVEQTTEPPAPAVKAEVRRGPELPKENGLGGGFQVVIQTPSFDGQNILSKEALQQH 3457
            KVKRAVEQTTEPPAPAVKAEVRRGPELPKENGLGGGFQVVIQTPSFDGQNILSKEALQQH
Sbjct: 181  KVKRAVEQTTEPPAPAVKAEVRRGPELPKENGLGGGFQVVIQTPSFDGQNILSKEALQQH 240

Query: 3456 TKLMEEISTYEVKMFNETWTLSDICFKPPGPSFNSGPLAGIMSKLLDKIIPCIWITPIDC 3277
            TKLMEEISTYEVKMFNETWTLSDICFKPPGPSFNSGPLAGIMSKLLDKIIPCIWITPIDC
Sbjct: 241  TKLMEEISTYEVKMFNETWTLSDICFKPPGPSFNSGPLAGIMSKLLDKIIPCIWITPIDC 300

Query: 3276 YWDGAKXXXXXXXXXXXPEVASFVSSLPPGNVTWKNLNPTSVIKEVGTLFDLGPIGNFFE 3097
            YWDGAK           PEVASFVSSLPPGNVTWKNLNPTSVIKEVGTLFDLGPIGNFFE
Sbjct: 301  YWDGAKPLGPNPPLNLGPEVASFVSSLPPGNVTWKNLNPTSVIKEVGTLFDLGPIGNFFE 360

Query: 3096 RAGIDGAYLDRPCIDPLEEECPKSAPNYFDRCHALTKFNEWNMAKAMSEQVTLERKIIPK 2917
            RAGIDGAYLDRPCIDPLEEECPKSAPNYFDRCHALTKFNEWNMAKAMSEQVTLERKIIPK
Sbjct: 361  RAGIDGAYLDRPCIDPLEEECPKSAPNYFDRCHALTKFNEWNMAKAMSEQVTLERKIIPK 420

Query: 2916 DDGKSDIAETILNDIFGKKRRKRQXXXXXXXXXXXXXXXXXXXXXXXXYLAGIANSTIAK 2737
            DDGKSDIAETILNDIFGKKRRKRQ                        YLAGIANSTIAK
Sbjct: 421  DDGKSDIAETILNDIFGKKRRKRQADTTTKKPATKKDEDYYEYEDDADYLAGIANSTIAK 480

Query: 2736 KNPEKEAKDLLCLEYGSSLLKWMQENPERLGEFLTKEEMPDYPNYGDVMTGGCKGFGKKI 2557
            KNPEKEAKDLLCLEYGSSLLKWMQENPERLGEFLTKEEMPDYPNYGDVMTGGCKGFGKKI
Sbjct: 481  KNPEKEAKDLLCLEYGSSLLKWMQENPERLGEFLTKEEMPDYPNYGDVMTGGCKGFGKKI 540

Query: 2556 MEWPEDLIIGGIQRDNGKLVSAEALQSVFLVSGAYDVFARIKNDKTDSHPGLDRHHFQPW 2377
            MEWPEDLIIGGIQRDNGKLVSAEALQSVFLVSGAYDVFARIKNDKTDSHPGLDRHHFQPW
Sbjct: 541  MEWPEDLIIGGIQRDNGKLVSAEALQSVFLVSGAYDVFARIKNDKTDSHPGLDRHHFQPW 600

Query: 2376 MAGEIISTWQRNFTKRLYSHELNRERRQFHPLASTSIADMLEEFSQFNXXXXXXXXXXXX 2197
            MAGEIISTWQRNFTKRLYSHELNRERRQFHPLASTSIADMLEEFSQFN
Sbjct: 601  MAGEIISTWQRNFTKRLYSHELNRERRQFHPLASTSIADMLEEFSQFNYIIIVIGYILMV 660

Query: 2196 XYAAFTQGRFQGWWLAVQSNVALAICGVILVTISSICGLGFATHLGINFNAATTQVVPFL 2017
             YAAFTQGRFQGWWLAVQSNVALAICGVILVTISSICGLGFATHLGINFNAATTQVVPFL
Sbjct: 661  IYAAFTQGRFQGWWLAVQSNVALAICGVILVTISSICGLGFATHLGINFNAATTQVVPFL 720

Query: 2016 SLGLGIDDMFLLLHNYDEIINICNKNEIGVLLKETGMSVMLTSINNILAFISGYVLPIPA 1837
            SLGLGIDDMFLLLHNYDEIINICNKNEIGVLLKETGMSVMLTSINNILAFISGYVLPIPA
Sbjct: 721  SLGLGIDDMFLLLHNYDEIINICNKNEIGVLLKETGMSVMLTSINNILAFISGYVLPIPA 780

Query: 1836 LRSFCSQTAILLAFNLIFLMFIFPAMIGIDLRRQRKGKRDLAYCSRGNPQMATSQSVPSN 1657
            LRSFCSQTAILLAFNLIFLMFIFPAMIGIDLRRQRKGKRDLAYCSRGNPQMATSQSVPSN
Sbjct: 781  LRSFCSQTAILLAFNLIFLMFIFPAMIGIDLRRQRKGKRDLAYCSRGNPQMATSQSVPSN 840

Query: 1656 VSNNTQMSSRAELAGYEKQADEYKRHEPWYTVGGFLNKIYIPALKNNVVKACVLIGTTTA 1477
            VSN   MSSRAELAGYEKQADEYKRHEPWYTVGGFLNKIYIPALKNNVVKACVLIGTTTA
Sbjct: 841  VSN---MSSRAELAGYEKQADEYKRHEPWYTVGGFLNKIYIPALKNNVVKACVLIGTTTA 897

Query: 1476 VVFGLYGMYTSTLGLELADVLPEHTPPAAFLRAREQYFSFYPMFAVLRGDKLDIPNQQQL 1297
            VVFGLYGMYTSTLGLELADVLPEHTPPAAFLRAREQYFSFYPMFAVLRGDKLDIPNQQQL
Sbjct: 898  VVFGLYGMYTSTLGLELADVLPEHTPPAAFLRAREQYFSFYPMFAVLRGDKLDIPNQQQL 957

Query: 1296 IEEYRAQLGSSKFMIKAEGKLQPYWMSMLRVWLQSLDMALEKDLAAGKFDLTNGNPIKVN 1117
            IEEYRAQLGSSKFMIKAEGKLQPYWMSMLRVWLQSLDMALEKDLAAGKFDLTNGNPIKVN
Sbjct: 958  IEEYRAQLGSSKFMIKAEGKLQPYWMSMLRVWLQSLDMALEKDLAAGKFDLTNGNPIKVN 1017

Query: 1116 GEKPSPESMIAARLVCSFGTNYNCDGRLGKMKMVENEVINPEGFYNYLTGWFNVDNMMYY 937
            GEKPSPESMIAARLVCSFGTNYNCDGRLGKMKMVENEVINPEGFYNYLTGWFNVDNMMYY
Sbjct: 1018 GEKPSPESMIAARLVCSFGTNYNCDGRLGKMKMVENEVINPEGFYNYLTGWFNVDNMMYY 1077

Query: 936  VSQASFYPTPPGWEYNEKLAKVVPAAEPLLYSQMPFYQNDLIDTPAIVKMIEEIRATCEE 757
            VSQASFYPTPPGWEYNEKLAKVVPAAEPLLYSQMPFYQNDLIDTPAIVKMIEEIRATCEE
Sbjct: 1078 VSQASFYPTPPGWEYNEKLAKVVPAAEPLLYSQMPFYQNDLIDTPAIVKMIEEIRATCEE 1137

Query: 756  YSERGLSNHPSGIAFTFWEQYLTLRWNLFQAICIIALAVFCVISILMFNPWAATLIMCIV 577
            YSERGLSNHPSGIAFTFWEQYLTLRWNLFQAICIIALAVFCVISILMFNPWAATLIMCIV
Sbjct: 1138 YSERGLSNHPSGIAFTFWEQYLTLRWNLFQAICIIALAVFCVISILMFNPWAATLIMCIV 1197

Query: 576  VITTIELGGFMGLMGIKMNPISAVTLICAVGIGVEFTAHVELAFLTALGTIDQRLESCLQ 397
            VITTIELGGFMGLMGIKMNPISAVTLICAVGIGVEFTAHVELAFLTALGTIDQRLESCLQ
Sbjct: 1198 VITTIELGGFMGLMGIKMNPISAVTLICAVGIGVEFTAHVELAFLTALGTIDQRLESCLQ 1257

Query: 396  HMFVPVYHGAISTFLGVVMLVFSEFDFVVTYFFYTMTLLVALGVFNGLCVLPVILTLVGP 217
            HMFVPVYHGAISTFLGVVMLVFSEFDFVVTYFFYTMTLLVALGVFNGLCVLPVILTLVGP
Sbjct: 1258 HMFVPVYHGAISTFLGVVMLVFSEFDFVVTYFFYTMTLLVALGVFNGLCVLPVILTLVGP 1317

Query: 216  KPELTPTDGSSVLPPPPPLRQQYAEKSGGVEGGMRKRKEKRPAEVEMXXXXXXXXXXXXX 37
            KPELTPTDGSSVLPPPPPLRQQYAEKSGGVEGGMRKRKEKRPAEVEM
Sbjct: 1318 KPELTPTDGSSVLPPPPPLRQQYAEKSGGVEGGMRKRKEKRPAEVEMSARDSPSTSSASH 1377

Query: 36   XXXXXXXXAHK 4
                    AHK
Sbjct: 1378 SSDDESSPAHK 1388


>gi|39584667|emb|CAE72420.1| Hypothetical protein CBG19582
            [Caenorhabditis briggsae]
          Length = 1380

 Score = 2315 bits (5998), Expect = 0.0
 Identities = 1152/1369 (84%), Positives = 1230/1369 (89%), Gaps = 6/1369 (0%)
 Frame = -1

Query: 4164 DEETDLLSEAKHCIRNVIHRTHRKFLENRLIGNFDSEDFSDAWKKKFAHAPTWCDADMSL 3985
            +E+T LL EAK+CI++V+ +T +KF+ENRLIGNFDSEDFSDAWKKKF+HAPTWCDADMSL
Sbjct: 1    EEKTSLLLEAKYCIKSVLGKTQKKFVENRLIGNFDSEDFSDAWKKKFSHAPTWCDADMSL 60

Query: 3984 QQIKRGKAVGNTVALTARAFFQLWLFRIGCFVQRWAWSTIFISHYGAHFEAPDLQNPNSM 3805
            QQIKRG A GN +AL ARAFFQLWL+RIGCFVQR+A STI I             N  +
Sbjct: 61   QQIKRGNAQGNRIALYARAFFQLWLYRIGCFVQRYA-STIII-------RVISNVNLKNF 112

Query: 3804 SISSLFLYCLCLGGLRHVTIETDLVKLWVSEGGRLNEEMGYLGQVKFERESGHL--VHKV 3631
            + SS+ LYCLCLGGL+HV IETDLVKLWVSEGGRLNEEM YLG+VK ERESGHL  +HK+
Sbjct: 113  NFSSMVLYCLCLGGLQHVVIETDLVKLWVSEGGRLNEEMEYLGRVKHERESGHLHHMHKI 172

Query: 3630 KRAVEQTTEPPAPAVKAEVRRGPELPKENGLGGGFQVVIQTPSFDGQNILSKEALQQHTK 3451
            KR +E+  + P PAVKAEVRRGPELPKENGLGGGFQVVIQTPS+DG+N+LSKEALQ+HTK
Sbjct: 173  KRDIEKAVKAP-PAVKAEVRRGPELPKENGLGGGFQVVIQTPSYDGENVLSKEALQKHTK 231

Query: 3450 LMEEISTYEVKMFNETWTLSDICFKPPGPSFNSGPLAGIMSKLLDKIIPCIWITPIDCYW 3271
            LM+EI++YEV MFNETWTL+DICFKPPGPSFNSGPLAGIMSKLLDKIIPCIWITP+DCYW
Sbjct: 232  LMQEIASYEVHMFNETWTLADICFKPPGPSFNSGPLAGIMSKLLDKIIPCIWITPVDCYW 291

Query: 3270 DGAKXXXXXXXXXXXPEVASFVSSLPPGNVTWKNLNPTSVIKEVGTLFDLGPIGNFFERA 3091
            DGAK           PEVASF+SSLPPGNVTWKNLNPTSVIKEVG LFDLGPIGNFFERA
Sbjct: 292  DGAKALGPNPPLNLGPEVASFISSLPPGNVTWKNLNPTSVIKEVGQLFDLGPIGNFFERA 351

Query: 3090 GIDGAYLDRPCIDPLEEECPKSAPNYFDRCHALTKFNEWNMAKAMSEQVTLERKIIPKDD 2911
            GIDGAYLDRPCIDPLEEECPKSAPNYFDRC ALTKFNEWN+AK+MSEQVTLERKII K++
Sbjct: 352  GIDGAYLDRPCIDPLEEECPKSAPNYFDRCAALTKFNEWNLAKSMSEQVTLERKIIKKEE 411

Query: 2910 GKSDIAETILNDIFGKKRRKRQXXXXXXXXXXXXXXXXXXXXXXXXYLAGIANSTIAKKN 2731
               DIAE+IL+DIFGKKRRKRQ                        Y+ G+ N+T  KK+
Sbjct: 412  ETKDIAESILSDIFGKKRRKRQAEASEDSDGSKKDDDYYAYEDDADYINGLGNTTTPKKD 471

Query: 2730 PEKEAKDLLCLEYGSSLLKWMQENPERLGEFLTKEEMPDYPNYGDVMTGGCKGFGKKIME 2551
             EKEAK+ LCLEYGSSLLKWMQENP RLGEFLTKEEMP YPNYGDVMTGGCKGFGKKIME
Sbjct: 472  AEKEAKNTLCLEYGSSLLKWMQENPTRLGEFLTKEEMPKYPNYGDVMTGGCKGFGKKIME 531

Query: 2550 WPEDLIIGGIQRDNGKLVSAEALQSVFLVSGAYDVFARIKNDKTDSHPGLDRHHFQPWMA 2371
            WPEDLIIGGI+R+NGKLVSAEALQSVFLVSG YDVFARIKNDKTDSHPGL+RH FQPWMA
Sbjct: 532  WPEDLIIGGIERENGKLVSAEALQSVFLVSGPYDVFARIKNDKTDSHPGLNRHGFQPWMA 591

Query: 2370 GEIISTWQRNFTKRLYSHELNRERRQFHPLASTSIADMLEEFSQFNXXXXXXXXXXXXXY 2191
            GEII+TWQRNFTK+LY HELN+ERR FHPLASTSIADMLEEFSQFN             Y
Sbjct: 592  GEIITTWQRNFTKKLYRHELNQERRVFHPLASTSIADMLEEFSQFNYIIIVIGYILMVIY 651

Query: 2190 AAFTQGRFQGWWLAVQSNVALAICGVILVTISSICGLGFATHLGINFNAATTQVVPFLSL 2011
            AAFTQGRFQGWWLAVQSNVALAI GV+LVT SSICGLGFATHLGINFNAATTQVVPFLSL
Sbjct: 652  AAFTQGRFQGWWLAVQSNVALAIAGVMLVTFSSICGLGFATHLGINFNAATTQVVPFLSL 711

Query: 2010 GLGIDDMFLLLHNYDEIINICNKNEIGVLLKETGMSVMLTSINNILAFISGYVLPIPALR 1831
            GLGIDDMFLLLHNYDEIINIC+KNEIGVLLKETGMSVMLTSINNILAFISGYVLPIPALR
Sbjct: 712  GLGIDDMFLLLHNYDEIINICHKNEIGVLLKETGMSVMLTSINNILAFISGYVLPIPALR 771

Query: 1830 SFCSQTAILLAFNLIFLMFIFPAMIGIDLRRQRKGKRDLAYCSRGNPQMATSQSVPSNVS 1651
            SFCSQTAILLAFNLIFLMFIFPAMIGIDLRRQRKGKRDLAYCSRG PQM  SQSVPSNVS
Sbjct: 772  SFCSQTAILLAFNLIFLMFIFPAMIGIDLRRQRKGKRDLAYCSRGTPQMPASQSVPSNVS 831

Query: 1650 NNTQMSSRAELAGYEKQADEYKRHEPWYTVGGFLNKIYIPALKNNVVKACVLIGTTTAVV 1471
            N +QMSSRAELAGY+KQA E+KRHEPWYTVGGFLN IYIPALKNN+ KA +LIGT TAVV
Sbjct: 832  NKSQMSSRAELAGYDKQAAEFKRHEPWYTVGGFLNNIYIPALKNNLCKAVILIGTATAVV 891

Query: 1470 FGLYGMYTSTLGLELADVLPEHTPPAAFLRAREQYFSFYPMFAVLRGDKLDIPNQQQLIE 1291
            FGLYGMYTSTLGLELADVLPEHTPPAAFLRARE+YFSFYPMFAVL+G+ +DIPNQQQLIE
Sbjct: 892  FGLYGMYTSTLGLELADVLPEHTPPAAFLRAREKYFSFYPMFAVLKGNDIDIPNQQQLIE 951

Query: 1290 EYRAQLGSSKFMIKAEGKLQPYWMSMLRVWLQSLDMALEKDLAAGKFDLTNGNPIKVNGE 1111
            EYR QLG+SKFMIKAEGKLQPYWMSMLRVWLQSLD ALEKDLAAGKFDLTNGNPIKVNGE
Sbjct: 952  EYRQQLGASKFMIKAEGKLQPYWMSMLRVWLQSLDKALEKDLAAGKFDLTNGNPIKVNGE 1011

Query: 1110 KPSPESMIAARLVCSFGTNYNCDGRLGKMKMV-ENEVINPEGFYNYLTGWFNVDNMMYYV 934
            KP+PESMIAARLVCSFGTNY+C GRLGK+KMV +N+VINPEGFYNYLTGWFNVDNMMYYV
Sbjct: 1012 KPTPESMIAARLVCSFGTNYDCSGRLGKIKMVDQNDVINPEGFYNYLTGWFNVDNMMYYV 1071

Query: 933  SQASFYPTPPGWEYNEKLAKVVPAAEPLLYSQMPFYQNDLIDTPAIVKMIEEIRATCEEY 754
            SQASFYPTPPGWEYNEK AKVVPAAEPLLYSQMPFYQNDL+DTPAIVKMIEEIRA CEEY
Sbjct: 1072 SQASFYPTPPGWEYNEKTAKVVPAAEPLLYSQMPFYQNDLVDTPAIVKMIEEIRAICEEY 1131

Query: 753  SERGLSNHPSGIAFTFWEQYLTLRWNLFQAICIIALAVFCVISILMFNPWAATLIMCIVV 574
            +ER L N+PSGIAFTFWEQYL+LR+NLF AI IIA AVF VISILMFNPWAATLIMCIVV
Sbjct: 1132 TERSLPNYPSGIAFTFWEQYLSLRFNLFMAILIIAAAVFTVISILMFNPWAATLIMCIVV 1191

Query: 573  ITTIELGGFMGLMGIKMNPISAVTLICAVGIGVEFTAHVELAFLTALGTIDQRLESCLQH 394
            ITTIELGGFMGLMGIKMNPISAVTLICAVGIGVEFTAHVELAFLT+LGTIDQRLESCLQH
Sbjct: 1192 ITTIELGGFMGLMGIKMNPISAVTLICAVGIGVEFTAHVELAFLTSLGTIDQRLESCLQH 1251

Query: 393  MFVPVYHGAISTFLGVVMLVFSEFDFVVTYFFYTMTLLVALGVFNGLCVLPVILTLVGPK 214
            MFVPVYHGAISTFLGVVMLVFSEFDFVV YFFYTMT+LVALGVFNGLCVLPVILTLVGP+
Sbjct: 1252 MFVPVYHGAISTFLGVVMLVFSEFDFVVKYFFYTMTVLVALGVFNGLCVLPVILTLVGPE 1311

Query: 213  PELTPTDGSSVLPPPPPLRQQYAEK---SGGVEGGMRKRKEKRPAEVEM 76
            PEL P+ G SVLPPPPPLRQQ AEK    GG+EGGMRKRKEK+ AEVEM
Sbjct: 1312 PELIPSSGDSVLPPPPPLRQQNAEKDGYGGGLEGGMRKRKEKKQAEVEM 1360


>gi|39597594|emb|CAE59824.1| Hypothetical protein CBG03294
            [Caenorhabditis briggsae]
          Length = 1402

 Score = 1130 bits (2922), Expect = 0.0
 Identities = 605/1360 (44%), Positives = 845/1360 (61%), Gaps = 38/1360 (2%)
 Frame = -1

Query: 4095 KFLENRLIGNFDSEDFSDAWKKKFAHAPTWCDADMSLQQIKRGKAVGNTVALTARAFFQL 3916
            +FL+  L+G   S D++D WK++F   P+WCDAD+ LQQ+ RGKA GN  AL +R+  Q
Sbjct: 59   RFLDRYLVGQSSSADYNDRWKREFRARPSWCDADLCLQQMNRGKATGNRYALYSRSLIQK 118

Query: 3915 WLFRIGCFVQRWAWSTIFISHYGAHFEAPDLQNPNSMSISSLFLYCLCLGGLRHVTIETD 3736
             LF +G  V R AWS I +                   +S +F +C    GL++V IETD
Sbjct: 119  LLFALGNAVHRNAWSIILV-------------------VSMIFAFCCY--GLQYVHIETD 157

Query: 3735 LVKLWVSEGGRLNEEMGYLGQVKFERESGHLVHKVKRAVEQTTEPPAPAVKAEVRRGPEL 3556
            +VKLWV++GGRL+EE+ +L  +K          ++ R                V  GPE+
Sbjct: 158  IVKLWVAQGGRLDEELNFLPNMK----------ELMR-------------NESVDSGPEI 194

Query: 3555 PKENGLGGGFQVVIQTPSFDGQNILSKEALQQHTKLMEEISTYEVKMFNETWTLSDICFK 3376
            P+ENGLGGG+QV+IQTP F+GQ+ L++  L +H ++M+ I+++ V +    W+LSDICFK
Sbjct: 195  PRENGLGGGYQVLIQTPEFEGQDALAQGPLLKHVEIMKHIASFNVSVHGVDWSLSDICFK 254

Query: 3375 PPGPSFNSGPLAGIMSKLLDKIIPCIWITPIDCYWDGAKXXXXXXXX--XXXPEVASFVS 3202
            P  PS +    A  +S ++DKI+PCIWITPIDC+W+G+K               V   +
Sbjct: 255  PAPPSVSPDSPAASLSDVIDKIVPCIWITPIDCFWEGSKALGPHPSLPKSALGLVGMLLK 314

Query: 3201 SLPPGN-VTWKNLNPTSVIKEVGTLFDLGPIGNFFERAGIDGAYLDRPCIDPLEEECPKS 3025
            +LP  + + W + +P  VI E+   F+LG    FFERAG+   Y++RPCIDPL+ ECP
Sbjct: 315  ALPDHDMIRWSDFDPIKVIDEIHNSFNLGSHYTFFERAGVGHGYMNRPCIDPLDPECPPM 374

Query: 3024 APNYFDRCHALTKFNEWNMAKAMSEQVTLERKIIPKDDGKSDIAETILNDIFGKKRRKRQ 2845
            A NYFD C  + K  E  +A    +++  E++   KD G    +       FG+K+R+
Sbjct: 375  AKNYFDVCPHVDKIRE--VASKYGQELEQEKQ---KDTGFDVFS------FFGRKKRETD 423

Query: 2844 XXXXXXXXXXXXXXXXXXXXXXXXYLAGIANSTI------------AKKNPEKEAKDLLC 2701
                                     +   A+               AKK  ++E ++  C
Sbjct: 424  QQPQMIHPAQPADSIPVVEGAVPADIPVTADPVTTTTTLSREEVENAKKIKDREMREH-C 482

Query: 2700 LEYGSSLLKWMQENPERLGEFLTKEEMPDYPNYGDVMTGGCKGFGKKIMEWPEDLIIGGI 2521
              Y  S   W++ N ++  E + +   P   +Y + MTGGC GF   ++ WPED+I+G
Sbjct: 483  KSYRKSTFNWLKANQDKWTEVMPENVYPKNVDYAEEMTGGCSGFASNVLNWPEDMILGNP 542

Query: 2520 Q--RDNGKLVSAEALQSVFLVSGAYDVFARIKNDKTDSHP--GLDRHHFQPWMAGEIIST 2353
            +  +  GKL SA+ALQSVFLV+   DVF R K  +  + P  GLD+  +    A +++
Sbjct: 543  RHTKRGGKLTSADALQSVFLVASPADVFLRFKQKQGRNPPKSGLDQEAWNETAAEQVLQA 602

Query: 2352 WQRNFTKRLYSHELN-----RERRQFHPLASTSIADMLEEFSQFNXXXXXXXXXXXXXYA 2188
            WQRNFTK LY+HE N      ERR  HPLASTSIADMLEEF QFN             YA
Sbjct: 603  WQRNFTKSLYTHEANFDADGNERRTLHPLASTSIADMLEEFCQFNYTIIFAGYALMLAYA 662

Query: 2187 AFTQGRFQGWWLAVQSNVALAICGVILVTISSICGLGFATHLGINFNAATTQVVPFLSLG 2008
              TQ RF     A +S++ LA+ GV++VT +S+ GLG AT  GI FNAATTQ+VPFL+LG
Sbjct: 663  IITQARFDSCLPATESSMGLALAGVLVVTFASVAGLGLATWFGIEFNAATTQIVPFLTLG 722

Query: 2007 LGIDDMFLLLHNYDEIINICNKN-EIGVLLKETGMSVMLTSINNILAFISGYVLPIPALR 1831
            +G+D+MF+LLHNY +++ +   + E+ +L++ETGMS++ TSINNIL+F++G +LPIPALR
Sbjct: 723  IGVDNMFMLLHNYRDVVKLAGGHAEMAILMRETGMSILCTSINNILSFLTGTLLPIPALR 782

Query: 1830 SFCSQTAILLAFNLIFLMFIFPAMIGIDLRRQRKGKRDLAYCSRGNPQ-----MATSQSV 1666
            SFC+Q++ILL FN I ++ I+PA+I IDLRR++  +RDL  C  G+ +     M +   +
Sbjct: 783  SFCAQSSILLTFNFIAILTIYPAIISIDLRRKKAQRRDLLCCLYGDTREESYSMISKPKI 842

Query: 1665 PSN--VSNNTQMSSRAELAGYEKQADEYKRHEPW-YTVGGFLNKIYIPALKNNVVKACVL 1495
            PS   +   ++ S   +  G   QA      +P  Y++  F+   YIP +     K  ++
Sbjct: 843  PSKRIIGAPSEASIMQQFDGIT-QAQMASSDDPAPYSLHAFIRYYYIPFISRPACKVGII 901

Query: 1494 IGTTTAVVFGLYGMYTSTLGLELADVLPEHTPPAAFLRAREQYFSFYPMFAVLRGDKLDI 1315
            IG    +   +YGM  STLGLEL DVLPEHT PA FLRAR++YFSFYPMFAV++G  +D
Sbjct: 902  IGCLVLLAASVYGMQQSTLGLELGDVLPEHTAPAQFLRARDKYFSFYPMFAVIKGPNIDY 961

Query: 1314 PNQQQLIEEYRAQLGSSKFMIKAEGK--LQPYWMSMLRVWLQSLDMALEKDLAAGKFDLT 1141
             +QQ+ I+ YR  +GSSKF+IK + +   + YW+ ++R WL S+    ++++A G FDL
Sbjct: 962  AHQQRQIDNYRQSIGSSKFVIKNKNEEPSEKYWLGLMRDWLISIQRGFDEEVAKGSFDLV 1021

Query: 1140 NGNPIKVNGEKPSPESMIAARLVCSFGTNYNCDGRLGKMKMVE-NEVINPEGFYNYLTGW 964
             G  I  N    S ++ IA  L+CS G  Y C GR+GK+++V+ + +IN +GFYNYLT W
Sbjct: 1022 TGTVIAAN---VSEDARIAHALMCSHGELYECAGRVGKIRLVDASGIINSDGFYNYLTAW 1078

Query: 963  FNVDNMMYYVSQASFYPTPPGWEY-NEKLAKVVPAAEPLLYSQMPFYQNDLIDTPAIVKM 787
            FNVD+MMYYVSQASF+PTPP WE   E     +PAA+PL+YSQ+PFY   L DT  IV+
Sbjct: 1079 FNVDHMMYYVSQASFFPTPPKWELVKENKENFIPAAKPLVYSQIPFYLTGLTDTGVIVEA 1138

Query: 786  IEEIRATCEEYSERGLSNHPSGIAFTFWEQYLTLRWNLFQAICIIALAVFCVISILMFNP 607
            I++IR+ C+ ++++GL N P GIAFTFWEQYL L  NL QAI II ++VFCVIS+L+FNP
Sbjct: 1139 IKDIRSVCDRFTDQGLPNFPQGIAFTFWEQYLFLTGNLMQAISIITISVFCVISVLLFNP 1198

Query: 606  WAATLIMCIVVITTIELGGFMGLMGIKMNPISAVTLICAVGIGVEFTAHVELAFLTALGT 427
            WAA +++CI+ I T EL GFMGL+GIK+NP+SAVTLI AVGIGVEFT HV ++FLTALGT
Sbjct: 1199 WAALMVVCILGIMTCELAGFMGLVGIKLNPVSAVTLITAVGIGVEFTVHVVVSFLTALGT 1258

Query: 426  IDQRLESCLQHMFVPVYHGAISTFLGVVMLVFSEFDFVVTYFFYTMTLLVALGVFNGLCV 247
              QR  S +  +FVPV HG+ ST LG++ML FSEF+FVV YFF  MT L+  G+ NGL +
Sbjct: 1259 RAQRTSSAVDRVFVPVIHGSFSTLLGILMLGFSEFEFVVKYFFIVMTALIGTGIINGLIL 1318

Query: 246  LPVILTLVGPKPELTPTDGSSVLPPPPPL-RQQYAEKSGG 130
            LPV+L+  GP+ E++P DG + L  PPPL +   + +SGG
Sbjct: 1319 LPVLLSWFGPRREISPADGKTTLALPPPLPKNLNSSRSGG 1358


>gi|17535373|ref|NP_495662.1| patched family member (ptc-1)
            [Caenorhabditis elegans]
 gi|37999492|sp|Q09614|PTC1_CAEEL Patched protein homolog 1
 gi|7511279|pir||T27969 hypothetical protein ZK675.1 - Caenorhabditis
            elegans
 gi|3881774|emb|CAA86843.1| Hypothetical protein ZK675.1
            [Caenorhabditis elegans]
          Length = 1405

 Score = 1125 bits (2909), Expect = 0.0
 Identities = 601/1364 (44%), Positives = 842/1364 (61%), Gaps = 42/1364 (3%)
 Frame = -1

Query: 4095 KFLENRLIGNFDSEDFSDAWKKKFAHAPTWCDADMSLQQIKRGKAVGNTVALTARAFFQL 3916
            +FL+  L+G   S D++D WK++F   P+WCDAD+ LQQ+ RGKA GN  AL +R+  Q
Sbjct: 59   RFLDQYLVGQSSSADYNDRWKREFRARPSWCDADLCLQQMNRGKATGNRYALYSRSLIQK 118

Query: 3915 WLFRIGCFVQRWAWSTIFISHYGAHFEAPDLQNPNSMSISSLFLYCLCLGGLRHVTIETD 3736
             LF +G  V R AWS I                   +++S +F   +C  GL++V IETD
Sbjct: 119  LLFALGNTVHRNAWSII-------------------LAVSMIF--AVCCYGLQYVHIETD 157

Query: 3735 LVKLWVSEGGRLNEEMGYLGQVKFERESGHLVHKVKRAVEQTTEPPAPAVKAEVRRGPEL 3556
            +VKLWV++GGRL+EE+ +L  +K              A+   T             GPEL
Sbjct: 158  IVKLWVAQGGRLDEELNFLPNIK-------------EAMRNVTGDS----------GPEL 194

Query: 3555 PKENGLGGGFQVVIQTPSFDGQNILSKEALQQHTKLMEEISTYEVKMFNETWTLSDICFK 3376
            P+ENGLGGG+QV+IQTP ++GQ+ L+   L +H ++M+ I+++ V +    W+LSDICFK
Sbjct: 195  PRENGLGGGYQVLIQTPEYEGQDALAAGPLLKHVEIMKHIASFNVSVHGVDWSLSDICFK 254

Query: 3375 PPGPSFNSGPLAGIMSKLLDKIIPCIWITPIDCYWDGAKXXXXXXXX--XXXPEVASFVS 3202
            P  PS  +   A  +  ++DKI+PCIWITPIDC+W+G+K               +   +S
Sbjct: 255  PAPPSVAADSAASSLGDVIDKIVPCIWITPIDCFWEGSKALGPHPSLPKSSLGPLGMLLS 314

Query: 3201 SLPPGN-VTWKNLNPTSVIKEVGTLFDLGPIGNFFERAGIDGAYLDRPCIDPLEEECPKS 3025
            SL  G+ + W + +P +VI E+   F+LG    FFERAG+   Y+DRPCIDPL+ ECP
Sbjct: 315  SLSDGDMIRWSDFDPIAVIDEIHRSFNLGSHYTFFERAGVSHGYMDRPCIDPLDPECPPM 374

Query: 3024 APNYFDRCHALTKFNEWNMAKAMSEQVTLERKIIPKDDGKSDIAETILNDIFGKKRRKR- 2848
            A NYFD C  + +  E  +AK    ++  E+K   KD G S        D  G+K+R+
Sbjct: 375  AKNYFDVCPHIDRVRE--IAKKYGTELEEEKK---KDSGYSFF------DFLGRKKREAG 423

Query: 2847 ---QXXXXXXXXXXXXXXXXXXXXXXXXYLAGIANSTIA------------KKNPEKEAK 2713
               +                          A I  +T              KK   +E K
Sbjct: 424  DQPKMIHPAQPADSIPTIEDAVPAQVPVSTAPIPTTTTLSPEEARAAEEKEKKQKARELK 483

Query: 2712 DLLCLEYGSSLLKWMQENPERLGEFLTKEEMPDYPNYGDVMTGGCKGFGKKIMEWPEDLI 2533
            D  C  Y  S  +W+++N ++  E +++   P   +Y   MTGGC GF   ++ WPED+I
Sbjct: 484  DY-CKSYRKSAFEWLKKNKDKWPEVMSENMYPQNVDYAAEMTGGCSGFASNVLNWPEDMI 542

Query: 2532 IGGIQR--DNGKLVSAEALQSVFLVSGAYDVFARIKND--KTDSHPGLDRHHFQPWMAGE 2365
            +G  +R    GKL  A+ALQSVFLV+   DVF R K    +     GLD   +    A +
Sbjct: 543  LGNPRRAKKGGKLSGADALQSVFLVASPADVFLRFKQKPGRNSMKTGLDMDAWNETAAEQ 602

Query: 2364 IISTWQRNFTKRLYSHELN-----RERRQFHPLASTSIADMLEEFSQFNXXXXXXXXXXX 2200
            ++  WQRNFTK LY+H+ N      ERR  HPLASTSIADMLEEF QFN
Sbjct: 603  VLQAWQRNFTKSLYNHKANVDEDGNERRTLHPLASTSIADMLEEFCQFNYTIILAGYALM 662

Query: 2199 XXYAAFTQGRFQGWWLAVQSNVALAICGVILVTISSICGLGFATHLGINFNAATTQVVPF 2020
              YA  TQ RF     A +S++ LA+ GV++VT +S+ GLG AT  GI FNAATTQ+VPF
Sbjct: 663  LAYAIVTQARFDNCLPATESSMGLALAGVLVVTFASVAGLGLATWFGIEFNAATTQIVPF 722

Query: 2019 LSLGLGIDDMFLLLHNYDEIINICNKN-EIGVLLKETGMSVMLTSINNILAFISGYVLPI 1843
            L+LG+G+D+MF+LLHNY +++ +   + E+ +L++ETGMS++ TSINNIL+F++G +LPI
Sbjct: 723  LTLGIGVDNMFMLLHNYRDVVKLAGGHAEMAILMRETGMSILCTSINNILSFLTGTLLPI 782

Query: 1842 PALRSFCSQTAILLAFNLIFLMFIFPAMIGIDLRRQRKGKRDLAYCSRGNPQMATSQSVP 1663
            PALRSFC+Q++ILL FN I ++ I+PA+I IDLRR++  +RDL  C  G+ +  +   +
Sbjct: 783  PALRSFCAQSSILLTFNFIAILTIYPAIISIDLRRKKAQRRDLVCCLYGDTREESYSMIS 842

Query: 1662 SNVSNNTQMSSRAELAGYEKQADEYKRHE--------PWYTVGGFLNKIYIPALKNNVVK 1507
                 + ++      A   +Q D   + +        PW ++  F+   YIP +     K
Sbjct: 843  KPKIQSKRIIGAPSEASIMQQFDGITQAQMASSDDPAPW-SLHSFIRYYYIPFISKPASK 901

Query: 1506 ACVLIGTTTAVVFGLYGMYTSTLGLELADVLPEHTPPAAFLRAREQYFSFYPMFAVLRGD 1327
              +++G    +     GM  STLGLEL DVLPEHT PA FLRAR++YFSFYPMFAV++G
Sbjct: 902  VAIIVGCCALLGASFIGMRQSTLGLELGDVLPEHTAPAQFLRARDKYFSFYPMFAVIKGP 961

Query: 1326 KLDIPNQQQLIEEYRAQLGSSKFMIKAEGK--LQPYWMSMLRVWLQSLDMALEKDLAAGK 1153
             +D  +QQ+ I+ YR  +GSSK++IK + +   + YW+ ++R WL S+    ++++A G
Sbjct: 962  NIDYAHQQRQIDNYRQSIGSSKYVIKNKNEEPSEKYWLGLMRDWLISIQRGFDEEVAKGS 1021

Query: 1152 FDLTNGNPIKVNGEKPSPESMIAARLVCSFGTNYNCDGRLGKMKMVE-NEVINPEGFYNY 976
            F+LT+G  I   G   S ++ +A  L+CS G+ + C GR+GK+++V+ + +IN +GFYNY
Sbjct: 1022 FNLTSGTVI---GSNVSEDARLAHALMCSHGSLFGCAGRVGKIRLVDASGIINSDGFYNY 1078

Query: 975  LTGWFNVDNMMYYVSQASFYPTPPGWEYNEKLAK-VVPAAEPLLYSQMPFYQNDLIDTPA 799
            LT WFNVD+MMYYVSQASF+PTPP WE ++   +  +PAAEPL YSQ+PFY   L DT
Sbjct: 1079 LTAWFNVDHMMYYVSQASFFPTPPKWELSKNHTENFIPAAEPLAYSQIPFYLTGLTDTAV 1138

Query: 798  IVKMIEEIRATCEEYSERGLSNHPSGIAFTFWEQYLTLRWNLFQAICIIALAVFCVISIL 619
            IV  I++IR+ CE ++++GL N P GIAFTFWEQYL L  NL QAI II ++VFCVIS+L
Sbjct: 1139 IVDAIKDIRSVCERFTDQGLPNFPQGIAFTFWEQYLFLTGNLMQAISIITISVFCVISVL 1198

Query: 618  MFNPWAATLIMCIVVITTIELGGFMGLMGIKMNPISAVTLICAVGIGVEFTAHVELAFLT 439
            +FNPWAA +++CI+ I T EL GFMGL+GIK+NP+SAVTLI AVGIGVEFT HV ++FLT
Sbjct: 1199 LFNPWAALMVVCILGIMTCELAGFMGLVGIKLNPVSAVTLITAVGIGVEFTVHVVVSFLT 1258

Query: 438  ALGTIDQRLESCLQHMFVPVYHGAISTFLGVVMLVFSEFDFVVTYFFYTMTLLVALGVFN 259
            ALGT  QR  S +  +FVPV HG+ ST LG++ML FSEF+FVV YFF  MT L+ +G+ N
Sbjct: 1259 ALGTRSQRTSSAVDRVFVPVIHGSFSTLLGILMLGFSEFEFVVKYFFIVMTALICIGIIN 1318

Query: 258  GLCVLPVILTLVGPKPELTPTDGSSVLPPPPPL-RQQYAEKSGG 130
            GL +LPV+L+  GP+ E++PT G + L  PPPL +   + +SGG
Sbjct: 1319 GLILLPVLLSWFGPRREISPTGGKTTLTLPPPLPKNANSSRSGG 1362




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