Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= Y116A8C_22
(795 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17544446|ref|NP_503023.1| putative endoplasmic reticulum prot... 492 e-138
gi|39588929|emb|CAE69559.1| Hypothetical protein CBG15771 [Caeno... 236 5e-61
gi|39589647|emb|CAE66882.1| Hypothetical protein CBG12261 [Caeno... 44 0.003
gi|27544802|dbj|BAC55015.1| MedA homolog [Fusarium oxysporum] 37 0.63
gi|23098163|ref|NP_691629.1| ferrichrome ABC transporter permeas... 37 0.63
gi|19034032|ref|NP_579911.1| BFLF2 protein [Human herpesvirus 4]... 36 1.1
gi|33239198|ref|NP_666854.1| olfactory receptor 1155; GA_x6K02T2... 34 3.1
gi|9627243|ref|NP_041725.1| cell fusing agent polyprotein [Cell ... 34 4.1
gi|27735343|ref|NP_776042.1| putative non-structural protein NS2... 34 4.1
gi|42631406|ref|ZP_00156944.1| COG2981: Uncharacterized protein ... 33 5.4
gi|46129028|ref|ZP_00155630.2| COG2981: Uncharacterized protein ... 33 5.4
gi|14590458|ref|NP_142526.1| hypothetical protein PH0559 [Pyroco... 33 5.4
gi|48859730|ref|ZP_00313660.1| COG5305: Predicted membrane prote... 33 9.1
>gi|17544446|ref|NP_503023.1| putative endoplasmic reticulum
protein, with at least 3 transmembrane domains (29.9 kD)
(4R999) [Caenorhabditis elegans]
gi|7509365|pir||T31521 hypothetical protein Y116A8C.23 -
Caenorhabditis elegans
gi|5832817|emb|CAB55155.1| Hypothetical protein Y116A8C.23
[Caenorhabditis elegans]
Length = 264
Score = 492 bits (1266), Expect = e-138
Identities = 246/264 (93%), Positives = 246/264 (93%)
Frame = +1
Query: 1 MSEEHHDMETAIEDNPIIRRRRGRFENCLSGIEFWCLMITSETALSIYVLIHWLLGCGSH 180
MSEEHHDMETAIEDNPIIRRRRGRFENCLSGIEFWCLMITSETALSIYVLIHWLLGCGSH
Sbjct: 1 MSEEHHDMETAIEDNPIIRRRRGRFENCLSGIEFWCLMITSETALSIYVLIHWLLGCGSH 60
Query: 181 ITFSSDDNAAVLSFIYFMSTLLAFLSIMSHVSGLLVPLFLFSGTGSFVLFFLVNISTMHT 360
ITFSSDDNAAVLSFIYFMSTLLAFLSIMSHVSGLLVPLFLFSGTGSFVLFFLVNISTMHT
Sbjct: 61 ITFSSDDNAAVLSFIYFMSTLLAFLSIMSHVSGLLVPLFLFSGTGSFVLFFLVNISTMHT 120
Query: 361 PHAVNVYKQLCQSNITKIYCEAIVEDKTVTIVKTWMLILFFLITCVTILFQFTRNDEYXX 540
PHAVNVYKQLCQSNITKIYCEAIVEDKTVTIVKTWMLILFFLITCVTILFQFTRNDEY
Sbjct: 121 PHAVNVYKQLCQSNITKIYCEAIVEDKTVTIVKTWMLILFFLITCVTILFQFTRNDEYAR 180
Query: 541 XXXXXXXXXXXXXXXXRETPIGATNIDEPPRYSTLEPMSPPKPGSSTVTSPPRYSYWERT 720
RETPIGATNIDEPPRYSTLEPMSPPKPGSSTVTSPPRYSYWERT
Sbjct: 181 RPPPPFHPAFYPYPMPRETPIGATNIDEPPRYSTLEPMSPPKPGSSTVTSPPRYSYWERT 240
Query: 721 FGRARSAASQCSEVSVKSTTAKSH 792
FGRARSAASQCSEVSVKSTTAKSH
Sbjct: 241 FGRARSAASQCSEVSVKSTTAKSH 264