Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= Y116A8C_22
         (795 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17544446|ref|NP_503023.1| putative endoplasmic reticulum prot...   492   e-138
gi|39588929|emb|CAE69559.1| Hypothetical protein CBG15771 [Caeno...   236   5e-61
gi|39589647|emb|CAE66882.1| Hypothetical protein CBG12261 [Caeno...    44   0.003
gi|27544802|dbj|BAC55015.1| MedA homolog [Fusarium oxysporum]          37   0.63
gi|23098163|ref|NP_691629.1| ferrichrome ABC transporter permeas...    37   0.63
gi|19034032|ref|NP_579911.1| BFLF2 protein [Human herpesvirus 4]...    36   1.1
gi|33239198|ref|NP_666854.1| olfactory receptor 1155; GA_x6K02T2...    34   3.1
gi|9627243|ref|NP_041725.1| cell fusing agent polyprotein [Cell ...    34   4.1
gi|27735343|ref|NP_776042.1| putative non-structural protein NS2...    34   4.1
gi|42631406|ref|ZP_00156944.1| COG2981: Uncharacterized protein ...    33   5.4
gi|46129028|ref|ZP_00155630.2| COG2981: Uncharacterized protein ...    33   5.4
gi|14590458|ref|NP_142526.1| hypothetical protein PH0559 [Pyroco...    33   5.4
gi|48859730|ref|ZP_00313660.1| COG5305: Predicted membrane prote...    33   9.1


>gi|17544446|ref|NP_503023.1| putative endoplasmic reticulum
           protein, with at least 3 transmembrane domains (29.9 kD)
           (4R999) [Caenorhabditis elegans]
 gi|7509365|pir||T31521 hypothetical protein Y116A8C.23 -
           Caenorhabditis elegans
 gi|5832817|emb|CAB55155.1| Hypothetical protein Y116A8C.23
           [Caenorhabditis elegans]
          Length = 264

 Score =  492 bits (1266), Expect = e-138
 Identities = 246/264 (93%), Positives = 246/264 (93%)
 Frame = +1

Query: 1   MSEEHHDMETAIEDNPIIRRRRGRFENCLSGIEFWCLMITSETALSIYVLIHWLLGCGSH 180
           MSEEHHDMETAIEDNPIIRRRRGRFENCLSGIEFWCLMITSETALSIYVLIHWLLGCGSH
Sbjct: 1   MSEEHHDMETAIEDNPIIRRRRGRFENCLSGIEFWCLMITSETALSIYVLIHWLLGCGSH 60

Query: 181 ITFSSDDNAAVLSFIYFMSTLLAFLSIMSHVSGLLVPLFLFSGTGSFVLFFLVNISTMHT 360
           ITFSSDDNAAVLSFIYFMSTLLAFLSIMSHVSGLLVPLFLFSGTGSFVLFFLVNISTMHT
Sbjct: 61  ITFSSDDNAAVLSFIYFMSTLLAFLSIMSHVSGLLVPLFLFSGTGSFVLFFLVNISTMHT 120

Query: 361 PHAVNVYKQLCQSNITKIYCEAIVEDKTVTIVKTWMLILFFLITCVTILFQFTRNDEYXX 540
           PHAVNVYKQLCQSNITKIYCEAIVEDKTVTIVKTWMLILFFLITCVTILFQFTRNDEY
Sbjct: 121 PHAVNVYKQLCQSNITKIYCEAIVEDKTVTIVKTWMLILFFLITCVTILFQFTRNDEYAR 180

Query: 541 XXXXXXXXXXXXXXXXRETPIGATNIDEPPRYSTLEPMSPPKPGSSTVTSPPRYSYWERT 720
                           RETPIGATNIDEPPRYSTLEPMSPPKPGSSTVTSPPRYSYWERT
Sbjct: 181 RPPPPFHPAFYPYPMPRETPIGATNIDEPPRYSTLEPMSPPKPGSSTVTSPPRYSYWERT 240

Query: 721 FGRARSAASQCSEVSVKSTTAKSH 792
           FGRARSAASQCSEVSVKSTTAKSH
Sbjct: 241 FGRARSAASQCSEVSVKSTTAKSH 264




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