Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= Y34D9A_3
         (2106 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|25143444|ref|NP_740778.1| putative cytoplasmic protein (1B513...  1264   0.0
gi|50727018|gb|AAT81174.1| Hypothetical protein Y34D9A.3a [Caeno...  1064   0.0
gi|25143447|ref|NP_740779.1| putative cytoplasmic protein (1B513...   572   e-161
gi|50727019|gb|AAT81175.1| Hypothetical protein Y34D9A.3b [Caeno...   372   e-101
gi|50727020|gb|AAT81176.1| Hypothetical protein Y34D9A.4 [Caenor...   210   1e-52
gi|39589293|emb|CAE74322.1| Hypothetical protein CBG22033 [Caeno...   191   8e-47
gi|39589294|emb|CAE74323.1| Hypothetical protein CBG22034 [Caeno...   186   2e-45
gi|32564343|ref|NP_490810.2| putative cytoplasmic protein (1B513...   150   9e-35
gi|39589319|emb|CAE74348.1| Hypothetical protein CBG22066 [Caeno...   104   7e-21
gi|9627288|ref|NP_041767.1| early protein [Human papillomavirus ...    38   1.1
gi|29293694|gb|AAO67728.1| small GTP binding protein [Oryza sati...    37   2.5
gi|22749459|ref|NP_689955.1| glypican 2; cerebroglycan [Homo sap...    36   3.2
gi|40018542|ref|NP_954551.1| carnitine deficiency-associated gen...    36   4.2
gi|48864957|ref|ZP_00318826.1| COG2244: Membrane protein involve...    36   4.2
gi|14141216|gb|AAK54351.1| SRp46 splicing factor [Homo sapiens]        36   4.2
gi|15055543|ref|NP_115285.1| Splicing factor, arginine/serine-ri...    36   4.2
gi|34872353|ref|XP_222174.2| similar to CDV-1R protein [Rattus n...    36   4.2
gi|50761859|ref|XP_424859.1| PREDICTED: similar to KIAA0433 [Gal...    35   5.5
gi|15638942|ref|NP_034009.2| carnitine deficiency-associated gen...    35   5.5
gi|46575953|gb|AAT01314.1| putative GTP-binding protein Rab7a [O...    35   7.2
gi|24378862|ref|NP_720817.1| glutamate synthase (large subunit) ...    35   7.2
gi|29170386|gb|AAO65974.1| putative vacuolar ATPase subunit H pr...    35   7.2
gi|46229235|gb|EAK90084.1| large hypothetical protein with possi...    35   9.3
gi|33317119|gb|AAQ04648.1| Unknown [Homo sapiens]                      35   9.3
gi|32399088|emb|CAD98328.1| hypothetical predicted transmembrane...    35   9.3


>gi|25143444|ref|NP_740778.1| putative cytoplasmic protein (1B513)
            [Caenorhabditis elegans]
          Length = 701

 Score = 1264 bits (3271), Expect = 0.0
 Identities = 652/701 (93%), Positives = 652/701 (93%)
 Frame = +1

Query: 1    MSICFRYETFXXXXXXXXXXXGPSELDIFQPMLVKRLQLAVVRLQRVQKPLREHKFRGID 180
            MSICFRYETF           GPSELDIFQPMLVKRLQLAVVRLQRVQKPLREHKFRGID
Sbjct: 1    MSICFRYETFLPKLLKLLMLLGPSELDIFQPMLVKRLQLAVVRLQRVQKPLREHKFRGID 60

Query: 181  VXXXXXXXXXXPADIVGHILRHTLPLRDVGLETLDLVVAFFVARPVPEENACAFNFSLIL 360
            V          PADIVGHILRHTLPLRDVGLETLDLVVAFFVARPVPEENACAFNFSLIL
Sbjct: 61   VLLQQILQIIIPADIVGHILRHTLPLRDVGLETLDLVVAFFVARPVPEENACAFNFSLIL 120

Query: 361  NIFEQQIMRRRRCIPVINDITEGFAAEELEYAVFDESLFTSIWKSPERLSNETDFHLLLT 540
            NIFEQQIMRRRRCIPVINDITEGFAAEELEYAVFDESLFTSIWKSPERLSNETDFHLLLT
Sbjct: 121  NIFEQQIMRRRRCIPVINDITEGFAAEELEYAVFDESLFTSIWKSPERLSNETDFHLLLT 180

Query: 541  ALSREIAAENYQEPLLILKFMKKTAIGQDEVINRIFTSLLKQILRDETRKKLDPHVVLDF 720
            ALSREIAAENYQEPLLILKFMKKTAIGQDEVINRIFTSLLKQILRDETRKKLDPHVVLDF
Sbjct: 181  ALSREIAAENYQEPLLILKFMKKTAIGQDEVINRIFTSLLKQILRDETRKKLDPHVVLDF 240

Query: 721  LDAGDKLFLDSETSKKAYAILKLYFLCRNRKSKLECFSCGCVQKYFIELYKDGTRLHEAL 900
            LDAGDKLFLDSETSKKAYAILKLYFLCRNRKSKLECFSCGCVQKYFIELYKDGTRLHEAL
Sbjct: 241  LDAGDKLFLDSETSKKAYAILKLYFLCRNRKSKLECFSCGCVQKYFIELYKDGTRLHEAL 300

Query: 901  NCLIKSKLSDSPTXXXXXXXXXXXXXXXDIMKLLGAEKPKIHSYFKENRTKTKLLMNSEL 1080
            NCLIKSKLSDSPT               DIMKLLGAEKPKIHSYFKENRTKTKLLMNSEL
Sbjct: 301  NCLIKSKLSDSPTIIERKPEKRIIIIFFDIMKLLGAEKPKIHSYFKENRTKTKLLMNSEL 360

Query: 1081 ELAVEYLRDFSDYELNWFLQQRADEDFQFLLETAKNLQAPVNSDGFWRNSLEKFDENSII 1260
            ELAVEYLRDFSDYELNWFLQQRADEDFQFLLETAKNLQAPVNSDGFWRNSLEKFDENSII
Sbjct: 361  ELAVEYLRDFSDYELNWFLQQRADEDFQFLLETAKNLQAPVNSDGFWRNSLEKFDENSII 420

Query: 1261 FIENQLKIMATRIDRKGLALRIQQISQKMMQKSGKIEEKTAIFIKFPQILLEIADFSILP 1440
            FIENQLKIMATRIDRKGLALRIQQISQKMMQKSGKIEEKTAIFIKFPQILLEIADFSILP
Sbjct: 421  FIENQLKIMATRIDRKGLALRIQQISQKMMQKSGKIEEKTAIFIKFPQILLEIADFSILP 480

Query: 1441 PNSSNLLFSTLILGFSAFYDGNEAQFNDLFRQFLSKTIPNSTCTSPMXXXXXXXXXXXXX 1620
            PNSSNLLFSTLILGFSAFYDGNEAQFNDLFRQFLSKTIPNSTCTSPM
Sbjct: 481  PNSSNLLFSTLILGFSAFYDGNEAQFNDLFRQFLSKTIPNSTCTSPMEIIEEICEKIRIK 540

Query: 1621 SNFRHLPDISFLKPNPDTIITQISEIFDTKIAKNDERIVEICSILLEKLAPQLQAFGDRG 1800
            SNFRHLPDISFLKPNPDTIITQISEIFDTKIAKNDERIVEICSILLEKLAPQLQAFGDRG
Sbjct: 541  SNFRHLPDISFLKPNPDTIITQISEIFDTKIAKNDERIVEICSILLEKLAPQLQAFGDRG 600

Query: 1801 KTPFCQIVNIIVDKYVKNSVEPVNFQLFREVCERAVDGFAMMTEQWNFLFLSAKILTILN 1980
            KTPFCQIVNIIVDKYVKNSVEPVNFQLFREVCERAVDGFAMMTEQWNFLFLSAKILTILN
Sbjct: 601  KTPFCQIVNIIVDKYVKNSVEPVNFQLFREVCERAVDGFAMMTEQWNFLFLSAKILTILN 660

Query: 1981 LTRREAGLFAVLMRKINKNEILLTKLRGKKEFVQLEGSLEL 2103
            LTRREAGLFAVLMRKINKNEILLTKLRGKKEFVQLEGSLEL
Sbjct: 661  LTRREAGLFAVLMRKINKNEILLTKLRGKKEFVQLEGSLEL 701


>gi|50727018|gb|AAT81174.1| Hypothetical protein Y34D9A.3a
            [Caenorhabditis elegans]
          Length = 574

 Score = 1064 bits (2751), Expect = 0.0
 Identities = 546/574 (95%), Positives = 546/574 (95%)
 Frame = +1

Query: 382  MRRRRCIPVINDITEGFAAEELEYAVFDESLFTSIWKSPERLSNETDFHLLLTALSREIA 561
            MRRRRCIPVINDITEGFAAEELEYAVFDESLFTSIWKSPERLSNETDFHLLLTALSREIA
Sbjct: 1    MRRRRCIPVINDITEGFAAEELEYAVFDESLFTSIWKSPERLSNETDFHLLLTALSREIA 60

Query: 562  AENYQEPLLILKFMKKTAIGQDEVINRIFTSLLKQILRDETRKKLDPHVVLDFLDAGDKL 741
            AENYQEPLLILKFMKKTAIGQDEVINRIFTSLLKQILRDETRKKLDPHVVLDFLDAGDKL
Sbjct: 61   AENYQEPLLILKFMKKTAIGQDEVINRIFTSLLKQILRDETRKKLDPHVVLDFLDAGDKL 120

Query: 742  FLDSETSKKAYAILKLYFLCRNRKSKLECFSCGCVQKYFIELYKDGTRLHEALNCLIKSK 921
            FLDSETSKKAYAILKLYFLCRNRKSKLECFSCGCVQKYFIELYKDGTRLHEALNCLIKSK
Sbjct: 121  FLDSETSKKAYAILKLYFLCRNRKSKLECFSCGCVQKYFIELYKDGTRLHEALNCLIKSK 180

Query: 922  LSDSPTXXXXXXXXXXXXXXXDIMKLLGAEKPKIHSYFKENRTKTKLLMNSELELAVEYL 1101
            LSDSPT               DIMKLLGAEKPKIHSYFKENRTKTKLLMNSELELAVEYL
Sbjct: 181  LSDSPTIIERKPEKRIIIIFFDIMKLLGAEKPKIHSYFKENRTKTKLLMNSELELAVEYL 240

Query: 1102 RDFSDYELNWFLQQRADEDFQFLLETAKNLQAPVNSDGFWRNSLEKFDENSIIFIENQLK 1281
            RDFSDYELNWFLQQRADEDFQFLLETAKNLQAPVNSDGFWRNSLEKFDENSIIFIENQLK
Sbjct: 241  RDFSDYELNWFLQQRADEDFQFLLETAKNLQAPVNSDGFWRNSLEKFDENSIIFIENQLK 300

Query: 1282 IMATRIDRKGLALRIQQISQKMMQKSGKIEEKTAIFIKFPQILLEIADFSILPPNSSNLL 1461
            IMATRIDRKGLALRIQQISQKMMQKSGKIEEKTAIFIKFPQILLEIADFSILPPNSSNLL
Sbjct: 301  IMATRIDRKGLALRIQQISQKMMQKSGKIEEKTAIFIKFPQILLEIADFSILPPNSSNLL 360

Query: 1462 FSTLILGFSAFYDGNEAQFNDLFRQFLSKTIPNSTCTSPMXXXXXXXXXXXXXSNFRHLP 1641
            FSTLILGFSAFYDGNEAQFNDLFRQFLSKTIPNSTCTSPM             SNFRHLP
Sbjct: 361  FSTLILGFSAFYDGNEAQFNDLFRQFLSKTIPNSTCTSPMEIIEEICEKIRIKSNFRHLP 420

Query: 1642 DISFLKPNPDTIITQISEIFDTKIAKNDERIVEICSILLEKLAPQLQAFGDRGKTPFCQI 1821
            DISFLKPNPDTIITQISEIFDTKIAKNDERIVEICSILLEKLAPQLQAFGDRGKTPFCQI
Sbjct: 421  DISFLKPNPDTIITQISEIFDTKIAKNDERIVEICSILLEKLAPQLQAFGDRGKTPFCQI 480

Query: 1822 VNIIVDKYVKNSVEPVNFQLFREVCERAVDGFAMMTEQWNFLFLSAKILTILNLTRREAG 2001
            VNIIVDKYVKNSVEPVNFQLFREVCERAVDGFAMMTEQWNFLFLSAKILTILNLTRREAG
Sbjct: 481  VNIIVDKYVKNSVEPVNFQLFREVCERAVDGFAMMTEQWNFLFLSAKILTILNLTRREAG 540

Query: 2002 LFAVLMRKINKNEILLTKLRGKKEFVQLEGSLEL 2103
            LFAVLMRKINKNEILLTKLRGKKEFVQLEGSLEL
Sbjct: 541  LFAVLMRKINKNEILLTKLRGKKEFVQLEGSLEL 574




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