Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= Y37E11AL_5
(2445 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17543084|ref|NP_500397.1| transcription initiation factor tfi... 1469 0.0
gi|39583679|emb|CAE63783.1| Hypothetical protein CBG08324 [Caeno... 983 0.0
gi|48121254|ref|XP_393233.1| similar to ENSANGP00000013395 [Apis... 119 3e-25
gi|630879|pir||S42220 transcription initiation factor IID chain ... 118 6e-25
gi|437333|gb|AAA16536.1| TAFII60 118 6e-25
gi|24666846|ref|NP_524161.2| CG32211-PA [Drosophila melanogaster... 118 6e-25
gi|740569|prf||2005369A transcription factor TFIID 118 8e-25
gi|2134164|pir||JC4366 transcription factor IID p80 chain homolo... 111 9e-23
gi|3915901|sp|Q91857|TAF6_XENLA Transcription initiation factor ... 111 9e-23
gi|47222523|emb|CAG02888.1| unnamed protein product [Tetraodon n... 111 9e-23
gi|46250328|gb|AAH68776.1| LOC397724 protein [Xenopus laevis] 109 3e-22
gi|5032147|ref|NP_005632.1| TBP-associated factor 6 isoform alph... 105 4e-21
gi|21536355|ref|NP_620834.1| TBP-associated factor 6 isoform gam... 105 4e-21
gi|31208413|ref|XP_313173.1| ENSANGP00000013395 [Anopheles gambi... 105 4e-21
gi|11991529|emb|CAC19673.1| TAFII70 protein [Pleurodeles waltl] 105 4e-21
gi|6678215|ref|NP_033341.1| TAF6 RNA polymerase II, TATA box bin... 105 7e-21
gi|34871482|ref|XP_213729.2| similar to Transcription initiation... 105 7e-21
gi|1363982|pir||JC4245 transcription factor IID chain - mouse 103 1e-20
gi|21536357|ref|NP_620835.1| TBP-associated factor 6 isoform del... 102 4e-20
gi|2196466|emb|CAA74021.1| TATA binding protein-associated facto... 80 2e-13
gi|50423941|ref|XP_460555.1| unnamed protein product [Debaryomyc... 80 2e-13
gi|34914604|ref|NP_918649.1| putative TATA binding protein-assoc... 79 5e-13
gi|25405719|pir||C96585 hypothetical protein F20D21.18 [imported... 79 5e-13
gi|46437770|gb|EAK97111.1| hypothetical protein CaO19.7454 [Cand... 79 7e-13
gi|13492644|gb|AAK28288.1| putative TBP-associated 59 kDa subuni... 78 9e-13
gi|15220358|ref|NP_171987.1| TATA box-binding protein-associated... 78 9e-13
gi|19075428|ref|NP_587928.1| transcription initiation factor tfi... 77 1e-12
gi|42495554|gb|AAS17938.1| TATA binding protein associated facto... 76 4e-12
gi|50548001|ref|XP_501470.1| hypothetical protein [Yarrowia lipo... 75 7e-12
gi|45198499|ref|NP_985528.1| AFL020Wp [Eremothecium gossypii] >g... 73 3e-11
gi|17064762|gb|AAL32535.1| Very similar to TATA binding protein-... 72 5e-11
gi|42495556|gb|AAS17939.1| TATA binding protein associated facto... 72 8e-11
gi|22330245|ref|NP_175838.2| expressed protein [Arabidopsis thal... 72 8e-11
gi|42495558|gb|AAS17940.1| TATA binding protein associated facto... 72 8e-11
gi|50311083|ref|XP_455565.1| unnamed protein product [Kluyveromy... 69 5e-10
gi|19074721|ref|NP_586227.1| TRANSCRIPTION INITIATION FACTOR TFI... 62 8e-08
gi|49120703|ref|XP_412369.1| hypothetical protein AN8232.2 [Aspe... 61 1e-07
gi|45550693|ref|NP_649547.3| CG10390-PA [Drosophila melanogaster... 60 2e-07
gi|32415970|ref|XP_328463.1| hypothetical protein [Neurospora cr... 60 2e-07
gi|25013131|gb|AAN71679.1| SD16013p [Drosophila melanogaster] 60 2e-07
gi|50257961|gb|EAL20655.1| hypothetical protein CNBE0210 [Crypto... 60 3e-07
gi|7509154|pir||T32410 hypothetical protein W09B6.2 - Caenorhabd... 55 6e-06
gi|50287705|ref|XP_446282.1| unnamed protein product [Candida gl... 54 2e-05
gi|50287717|ref|XP_446288.1| unnamed protein product [Candida gl... 54 2e-05
gi|17536589|ref|NP_493919.1| TBP-Associated transcription Factor... 54 2e-05
gi|6321326|ref|NP_011403.1| Subunit (60 kDa) of TFIID and SAGA c... 53 3e-05
gi|46310076|gb|AAS87319.1| CG9348-like protein [Drosophila miranda] 52 5e-05
gi|46132948|ref|XP_389187.1| hypothetical protein FG09011.1 [Gib... 49 7e-04
gi|39586969|emb|CAE62904.1| Hypothetical protein CBG07094 [Caeno... 46 0.005
gi|22122597|ref|NP_666204.1| TAF6-like RNA polymerase II, p300/C... 44 0.024
gi|34861560|ref|XP_219557.2| similar to RIKEN cDNA C530024J06 [R... 44 0.024
gi|5453844|ref|NP_006464.1| TAF6-like RNA polymerase II; p300/CB... 42 0.053
gi|14250642|gb|AAH08785.1| TAF6L protein [Homo sapiens] 42 0.053
gi|46227597|gb|EAK88532.1| predicted transcription factor subuni... 41 0.15
gi|47209819|emb|CAF92633.1| unnamed protein product [Tetraodon n... 40 0.20
gi|25511725|pir||A86332 F6F9.8 protein - Arabidopsis thaliana >g... 39 0.77
gi|18394794|ref|NP_564097.1| calmodulin-binding family protein [... 39 0.77
gi|20856689|gb|AAM26680.1| At1g19870/F6F9_18 [Arabidopsis thalia... 39 0.77
gi|21537139|gb|AAM61480.1| unknown [Arabidopsis thaliana] 39 0.77
gi|15890288|ref|NP_355960.1| AGR_L_351p [Agrobacterium tumefacie... 38 1.0
gi|26345988|dbj|BAC36645.1| unnamed protein product [Mus musculus] 37 2.9
gi|49072314|ref|XP_400446.1| hypothetical protein UM02831.1 [Ust... 37 2.9
gi|29826628|ref|NP_821262.1| hypothetical protein SAV88 [Strepto... 36 5.0
gi|21225977|ref|NP_631756.1| hypothetical protein SC8D11.09c [St... 35 6.5
gi|38679227|gb|AAR26247.1| OssG [Streptococcus thermophilus] 35 8.5
>gi|17543084|ref|NP_500397.1| transcription initiation factor tfiid
subunit (4E452) [Caenorhabditis elegans]
gi|14574280|gb|AAK68430.1| Hypothetical protein Y37E11AL.8
[Caenorhabditis elegans]
Length = 814
Score = 1469 bits (3804), Expect = 0.0
Identities = 762/814 (93%), Positives = 762/814 (93%)
Frame = -1
Query: 2445 MERKIDKEHIGNYLVTSSRLXXXXXXXXXXXXXXKDGLIKQIGEKCVPRQFSLVLKRELK 2266
MERKIDKEHIGNYLVTSSRL KDGLIKQIGEKCVPRQFSLVLKRELK
Sbjct: 1 MERKIDKEHIGNYLVTSSRLVKIKEAVVSKSEEEKDGLIKQIGEKCVPRQFSLVLKRELK 60
Query: 2265 EEGSQTEDIAKSKRKCVEKQDPAEIKVSAPRPTPSLDDVIERSPELLGSLTTAAANSIGA 2086
EEGSQTEDIAKSKRKCVEKQDPAEIKVSAPRPTPSLDDVIERSPELLGSLTTAAANSIGA
Sbjct: 61 EEGSQTEDIAKSKRKCVEKQDPAEIKVSAPRPTPSLDDVIERSPELLGSLTTAAANSIGA 120
Query: 2085 CTRLVLRTIIQNAKKSASRENRKRLVPSDVDIACGIAQIDYNLTCPLLRPTPSSDRMYWG 1906
CTRLVLRTIIQNAKKSASRENRKRLVPSDVDIACGIAQIDYNLTCPLLRPTPSSDRMYWG
Sbjct: 121 CTRLVLRTIIQNAKKSASRENRKRLVPSDVDIACGIAQIDYNLTCPLLRPTPSSDRMYWG 180
Query: 1905 RKLTKEHYTIDANSKEMVSHERFCDSIMIKDHWLVVDGIQPCLPENVIPSEVKRRFQEQQ 1726
RKLTKEHYTIDANSKEMVSHERFCDSIMIKDHWLVVDGIQPCLPENVIPSEVKRRFQEQQ
Sbjct: 181 RKLTKEHYTIDANSKEMVSHERFCDSIMIKDHWLVVDGIQPCLPENVIPSEVKRRFQEQQ 240
Query: 1725 HETQRAHGFGVPGIKREPMPEKRMSTQTFSMEHQVLYSEITKILTSGSSLQRQKVLETIE 1546
HETQRAHGFGVPGIKREPMPEKRMSTQTFSMEHQVLYSEITKILTSGSSLQRQKVLETIE
Sbjct: 241 HETQRAHGFGVPGIKREPMPEKRMSTQTFSMEHQVLYSEITKILTSGSSLQRQKVLETIE 300
Query: 1545 TDTGIQFLAGRFVILIAEGTRLHIGTRNIRGLANLLKLTWSLMKNPNIRLEKYLYVLVPS 1366
TDTGIQFLAGRFVILIAEGTRLHIGTRNIRGLANLLKLTWSLMKNPNIRLEKYLYVLVPS
Sbjct: 301 TDTGIQFLAGRFVILIAEGTRLHIGTRNIRGLANLLKLTWSLMKNPNIRLEKYLYVLVPS 360
Query: 1365 LISCVVSKNMVPILDVSRVGLKAKPTTVTPLGATPPELTADDRERIIRDLEFEFKLREAS 1186
LISCVVSKNMVPILDVSRVGLKAKPTTVTPLGATPPELTADDRERIIRDLEFEFKLREAS
Sbjct: 361 LISCVVSKNMVPILDVSRVGLKAKPTTVTPLGATPPELTADDRERIIRDLEFEFKLREAS 420
Query: 1185 GKLLAELSSQYQNLNLNVRIIQTLRGVLSGNQDPAAIYGVLCTLFAFGNLTINSVVLPKM 1006
GKLLAELSSQYQNLNLNVRIIQTLRGVLSGNQDPAAIYGVLCTLFAFGNLTINSVVLPKM
Sbjct: 421 GKLLAELSSQYQNLNLNVRIIQTLRGVLSGNQDPAAIYGVLCTLFAFGNLTINSVVLPKM 480
Query: 1005 HDIYCSLQASRSEIPQVKPTMTKLRKIVVETEASRMEIVQNRTIELVMVDKLHDISMKNR 826
HDIYCSLQASRSEIPQVKPTMTKLRKIVVETEASRMEIVQNRTIELVMVDKLHDISMKNR
Sbjct: 481 HDIYCSLQASRSEIPQVKPTMTKLRKIVVETEASRMEIVQNRTIELVMVDKLHDISMKNR 540
Query: 825 YALNTEMVDQYTGHLKITRPSLLLKQEAYLEELEXXXXXXXXXXXXXXXXXXXXXXXXXQ 646
YALNTEMVDQYTGHLKITRPSLLLKQEAYLEELE Q
Sbjct: 541 YALNTEMVDQYTGHLKITRPSLLLKQEAYLEELERRRRIRRSTTTTTTTSSHHHQHQQQQ 600
Query: 645 LHNHPMIDEAMLDNLLDDSNRPWSKPAAQLDEQQLEPHLDREKETFFRKPKLFLARKEKS 466
LHNHPMIDEAMLDNLLDDSNRPWSKPAAQLDEQQLEPHLDREKETFFRKPKLFLARKEKS
Sbjct: 601 LHNHPMIDEAMLDNLLDDSNRPWSKPAAQLDEQQLEPHLDREKETFFRKPKLFLARKEKS 660
Query: 465 KDGKLVASFLRPLEFGYMPGLPSTKTXXXXXXXXXXXXXRETLTRESILGNSLYASRASA 286
KDGKLVASFLRPLEFGYMPGLPSTKT RETLTRESILGNSLYASRASA
Sbjct: 661 KDGKLVASFLRPLEFGYMPGLPSTKTGGRGIPGHGPAGARETLTRESILGNSLYASRASA 720
Query: 285 ENHPLKSVVKDSDELLRRFVSRQDPQAGAIIYGRSMMMTSSGRATLDSEIARAAQQLSAV 106
ENHPLKSVVKDSDELLRRFVSRQDPQAGAIIYGRSMMMTSSGRATLDSEIARAAQQLSAV
Sbjct: 721 ENHPLKSVVKDSDELLRRFVSRQDPQAGAIIYGRSMMMTSSGRATLDSEIARAAQQLSAV 780
Query: 105 RLRNSVGTSRAAGKKDEMSRGRFLTTAPRQQIGT 4
RLRNSVGTSRAAGKKDEMSRGRFLTTAPRQQIGT
Sbjct: 781 RLRNSVGTSRAAGKKDEMSRGRFLTTAPRQQIGT 814
>gi|39583679|emb|CAE63783.1| Hypothetical protein CBG08324
[Caenorhabditis briggsae]
Length = 812
Score = 983 bits (2540), Expect = 0.0
Identities = 522/832 (62%), Positives = 627/832 (74%), Gaps = 27/832 (3%)
Frame = -1
Query: 2445 MERKIDKEHIGNYLVTSSRLXXXXXXXXXXXXXXKDGLIKQIGEKCVPRQFSLVLKRELK 2266
ME +IDK+ IG+Y+VT++RL + LIKQIGEKCVP+QF VLKR LK
Sbjct: 1 MEMRIDKDRIGDYMVTNARLIKVKDTVVKSEEDK-NLLIKQIGEKCVPKQFVPVLKRALK 59
Query: 2265 EEGSQTEDIAKSKRKCVEKQDPAEIKVSAPRPTPSLDDVIE----RSPELLGSLTTAAAN 2098
EEGSQTED++KSKRKCV K+ PAEI VS P+PTPSLDDV+ + PE +T AAN
Sbjct: 60 EEGSQTEDVSKSKRKCVGKKPPAEIPVSEPKPTPSLDDVLSNLLSKKPEATNLITQDAAN 119
Query: 2097 SIGACTRLVLRTIIQNAKKSASRENRKRLVPSDVDIACGIAQIDYNLTCPLLRPTPSSDR 1918
+IG CTRL+LRTII+NAK++ASRENRKR+VPSDVD+A +++Y+LTCPLL+PTPSSDR
Sbjct: 120 TIGGCTRLILRTIIENAKRTASRENRKRVVPSDVDLAFSFTEMNYDLTCPLLKPTPSSDR 179
Query: 1917 MYWGRKLTKEHYTIDANSKEMVSHERFCDSIMIKDHWLVVDGIQPCLPENVIPSEVKRRF 1738
+YWGRK TK TIDA S E+VSHERFCDSIMIKDHWLVVDG+QPC+PENVIPSEVKR+F
Sbjct: 180 LYWGRKSTKPRKTIDAASSEIVSHERFCDSIMIKDHWLVVDGVQPCVPENVIPSEVKRKF 239
Query: 1737 QEQQHETQRAHGFGVPGIKREPMPEKRMSTQTFSMEHQVLYSEITKILTSGSSLQRQKVL 1558
QEQQ ETQR +G+ VPGIKR+P PEKRMSTQTFSMEHQVLY E+TKILT+GS+L+RQKVL
Sbjct: 240 QEQQQETQRLYGYSVPGIKRDPPPEKRMSTQTFSMEHQVLYIEVTKILTNGSALERQKVL 299
Query: 1557 ETIETDTGIQFLAGRFVILIAEGTRLHIGTRNIRGLANLLKLTWSLMKNPNIRLEKYLYV 1378
ETIETDTG+QFLAGRFVILIAEG RLHIGTRN RGLANL+KLTWSLMKNPNIRLEKYLYV
Sbjct: 300 ETIETDTGLQFLAGRFVILIAEGVRLHIGTRNTRGLANLMKLTWSLMKNPNIRLEKYLYV 359
Query: 1377 LVPSLISCVVSKNMVPILDVSR-VGLKAKPTTVTPLGATPPELTADDRERIIRDLEFEFK 1201
LVPSLISCVVSKNMVP++D SR +K TVT A PELT++D ERIIRD+EFEF+
Sbjct: 360 LVPSLISCVVSKNMVPLVDPSRGAHGSSKSKTVT---AGTPELTSEDHERIIRDMEFEFR 416
Query: 1200 LREASGKLLAELSSQYQNLNLNVRIIQTLRGVLSGNQDPAAIYGVLCTLFAFGNLTINSV 1021
LREA+GKLLAELS+QY++ NL+VRIIQ LR VL+G +DP AIYGVLCT FAFGNLTIN+V
Sbjct: 417 LREAAGKLLAELSNQYESQNLSVRIIQMLRKVLAGQKDPVAIYGVLCTFFAFGNLTINTV 476
Query: 1020 VLPKMHDIYCSLQASRSEIPQVKPTMTKLRKIVVETEASRMEIVQNRTIELVMVDKLHDI 841
VLPKMHDI+CS Q +RS IP VKPTMTKL+K++ ETEA RMEI+ NRTIEL+M +
Sbjct: 477 VLPKMHDIFCSFQDARSNIPSVKPTMTKLKKLITETEAQRMEIILNRTIELIMKIIFENE 536
Query: 840 SMKNR---------------------YALNTEMVDQYTGHLKITRPSLLLKQEAYLEELE 724
R YALN+EMV++ TGHLKI RPSLLLK +A+ E+E
Sbjct: 537 IFNERKLADRDAYVTLYAEFGALFYDYALNSEMVNENTGHLKINRPSLLLKPDAFKLEME 596
Query: 723 XXXXXXXXXXXXXXXXXXXXXXXXXQLHNHPMIDEAMLDNLLDDSNRPWSKPAAQLDEQQ 544
++P+ D + +N LDDSNRPW+K A Q++ +
Sbjct: 597 KLKERKRPTAGTTSSS------------SNPVND--VPENFLDDSNRPWAKAATQVEALE 642
Query: 543 LEPHLDREKETFFRKPKLFLARKEKSKDGKL-VASFLRPLEFGYMPGLPSTKTXXXXXXX 367
P +EKETFFRKPKLFL RKEK++DG+ VASF+RPLE+G+MP LPS++
Sbjct: 643 QSPLDSQEKETFFRKPKLFLVRKEKAEDGRTKVASFIRPLEYGHMPTLPSSRNHKISDAP 702
Query: 366 XXXXXXRETLTRESILGNSLYASRASAENHPLKSVVKDSDELLRRFVSRQDPQAGAIIYG 187
RESIL S+YASR S PL K+SDE+++RFV+R D ++GAIIYG
Sbjct: 703 LPN-------VRESILSQSIYASRTS---EPLAKNSKESDEIMKRFVARDDEKSGAIIYG 752
Query: 186 RSMMMTSSGRATLDSEIARAAQQLSAVRLRNSVGTSRAAGKKDEMSRGRFLT 31
R++MMT GR+T+D EI +AA QLS+VR+RNSV R AGKK+EMSRGRFL+
Sbjct: 753 RNLMMTEKGRSTIDEEINKAAHQLSSVRIRNSVAVHRPAGKKEEMSRGRFLS 804