Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= Y37E3_13
(2364 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|25143580|ref|NP_740802.1| zebrafish dead eye like, Nuclear Po... 1504 0.0
gi|39589336|emb|CAE74365.1| Hypothetical protein CBG22089 [Caeno... 1299 0.0
gi|25143583|ref|NP_740803.1| zebrafish dead eye like, Nuclear Po... 713 0.0
gi|47498074|ref|NP_998879.1| hypothetical protein MGC76268 [Xeno... 210 1e-52
gi|18606331|gb|AAH23140.1| Nucleoporin 93 [Mus musculus] 210 1e-52
gi|31205587|ref|XP_311745.1| ENSANGP00000014233 [Anopheles gambi... 209 2e-52
gi|50753601|ref|XP_414060.1| PREDICTED: similar to KIAA0095 [Gal... 209 3e-52
gi|27369533|ref|NP_765998.1| nucleoporin 93 [Mus musculus] >gnl|... 208 4e-52
gi|26337305|dbj|BAC32337.1| unnamed protein product [Mus musculus] 207 9e-52
gi|34851302|ref|XP_214639.2| similar to RIKEN cDNA 2410008G02 [R... 207 9e-52
gi|40788963|dbj|BAA07680.2| KIAA0095 [Homo sapiens] 206 2e-51
gi|1490628|gb|AAB49669.1| An4a 206 2e-51
gi|46576971|sp|Q7ZX96|NU93_XENLA Nuclear pore complex protein Nu... 206 2e-51
gi|41281437|ref|NP_055484.2| nucleoporin 93kDa [Homo sapiens] >g... 206 3e-51
gi|42476250|ref|NP_571056.2| dead eye [Danio rerio] >gnl|BL_ORD_... 203 2e-50
gi|1679792|gb|AAB61137.1| Allele: hi4 [Danio rerio] 202 2e-50
gi|39104518|dbj|BAC97865.2| mKIAA0095 protein [Mus musculus] 187 8e-46
gi|47221890|emb|CAF98902.1| unnamed protein product [Tetraodon n... 176 3e-42
gi|18859665|ref|NP_572929.1| CG11092-PA [Drosophila melanogaster... 170 1e-40
gi|48097576|ref|XP_393823.1| similar to ENSANGP00000014233 [Apis... 162 4e-38
gi|21357833|ref|NP_650404.1| CG7262-PA [Drosophila melanogaster]... 133 2e-29
gi|50309169|ref|XP_454590.1| unnamed protein product [Kluyveromy... 107 2e-21
gi|50259474|gb|EAL22147.1| hypothetical protein CNBC2850 [Crypto... 105 4e-21
gi|49074612|ref|XP_401428.1| hypothetical protein UM03813.1 [Ust... 105 4e-21
gi|50293521|ref|XP_449172.1| unnamed protein product [Candida gl... 100 3e-19
gi|19075969|ref|NP_588469.1| putative nucleoporin complex subuni... 97 2e-18
gi|50549297|ref|XP_502119.1| hypothetical protein [Yarrowia lipo... 94 2e-17
gi|45201099|ref|NP_986669.1| AGR004Wp [Eremothecium gossypii] >g... 91 1e-16
gi|14318524|ref|NP_116657.1| Part of complex at nuclear pore con... 89 5e-16
gi|395232|emb|CAA51427.1| NIC96 [Saccharomyces cerevisiae] 89 5e-16
gi|1490630|gb|AAB49670.1| An4b 88 8e-16
gi|32415323|ref|XP_328141.1| hypothetical protein ( (AL513408) r... 81 1e-13
gi|49103064|ref|XP_411117.1| hypothetical protein AN6980.2 [Aspe... 81 1e-13
gi|12718244|emb|CAC28552.1| related to nucleoporin-interacting p... 80 2e-13
gi|46109094|ref|XP_381605.1| hypothetical protein FG01429.1 [Gib... 79 4e-13
gi|46441403|gb|EAL00700.1| hypothetical protein CaO19.9553 [Cand... 79 4e-13
gi|46441270|gb|EAL00568.1| hypothetical protein CaO19.2002 [Cand... 79 4e-13
gi|19075922|ref|NP_588422.1| nucleoporin complex subunit [Schizo... 76 4e-12
gi|50287281|ref|XP_446070.1| unnamed protein product [Candida gl... 75 7e-12
gi|38102894|gb|EAA49675.1| hypothetical protein MG08590.4 [Magna... 74 1e-11
gi|50405591|ref|XP_456432.1| unnamed protein product [Debaryomyc... 65 6e-09
gi|18405761|ref|NP_565951.1| nucleoporin interacting component f... 45 0.006
gi|23478088|gb|EAA15269.1| hypothetical protein [Plasmodium yoel... 37 1.6
gi|50842908|ref|YP_056135.1| methylated-DNA--protein-cysteine me... 37 2.2
gi|46141504|ref|ZP_00203978.1| COG0457: FOG: TPR repeat [Psychro... 37 2.8
gi|15894245|ref|NP_347594.1| Xre family DNA-binding domain and T... 36 4.8
gi|15668304|ref|NP_247100.1| L-isoaspartyl protein carboxyl meth... 35 8.2
gi|39591652|emb|CAE71229.1| Hypothetical protein CBG18097 [Caeno... 35 8.2
gi|50741488|ref|XP_426143.1| PREDICTED: similar to mixed lineage... 35 8.2
>gi|25143580|ref|NP_740802.1| zebrafish dead eye like, Nuclear Pore
complex Protein NPP-13 (npp-13) [Caenorhabditis elegans]
gi|13491276|gb|AAK27866.1| Nuclear pore complex protein protein 13,
isoform a [Caenorhabditis elegans]
Length = 787
Score = 1504 bits (3895), Expect = 0.0
Identities = 756/787 (96%), Positives = 756/787 (96%)
Frame = +1
Query: 1 MLQFTEILGRVDHQGFAQLLANPIFQTNRVGQENSQQFTVRNGVEQELCGILGGSEGDWT 180
MLQFTEILGRVDHQGFAQLLANPIFQTNRVGQENSQQFTVRNGVEQELCGILGGSEGDWT
Sbjct: 1 MLQFTEILGRVDHQGFAQLLANPIFQTNRVGQENSQQFTVRNGVEQELCGILGGSEGDWT 60
Query: 181 RQTHSVQKQMMFGERGIELPSRQPKSHTAEDTLTDEGVVDVPEAVMXXXXXXXXXXXXSR 360
RQTHSVQKQMMFGERGIELPSRQPKSHTAEDTLTDEGVVDVPEAVM SR
Sbjct: 61 RQTHSVQKQMMFGERGIELPSRQPKSHTAEDTLTDEGVVDVPEAVMDDIDEEELDEDISR 120
Query: 361 VKVETDRAFFNHMLLSRPAAVPMNPAQAMERDNLPFGGGKFVNKNISDRRELIFGDKLHK 540
VKVETDRAFFNHMLLSRPAAVPMNPAQAMERDNLPFGGGKFVNKNISDRRELIFGDKLHK
Sbjct: 121 VKVETDRAFFNHMLLSRPAAVPMNPAQAMERDNLPFGGGKFVNKNISDRRELIFGDKLHK 180
Query: 541 FLKNQGKKSLVDLMKEAIDESGTDGALGDVWNDVTSVLNRKTSASRDDLTTTANLVEDAC 720
FLKNQGKKSLVDLMKEAIDESGTDGALGDVWNDVTSVLNRKTSASRDDLTTTANLVEDAC
Sbjct: 181 FLKNQGKKSLVDLMKEAIDESGTDGALGDVWNDVTSVLNRKTSASRDDLTTTANLVEDAC 240
Query: 721 KYLQAVFTEHMQTVVERNLEVAERGGIPGTRGLVNAFLKVGTEESFQPEDDSIDGMPTWQ 900
KYLQAVFTEHMQTVVERNLEVAERGGIPGTRGLVNAFLKVGTEESFQPEDDSIDGMPTWQ
Sbjct: 241 KYLQAVFTEHMQTVVERNLEVAERGGIPGTRGLVNAFLKVGTEESFQPEDDSIDGMPTWQ 300
Query: 901 VTYHCVRAGDMKSASETLNRLKSFPQCATLVAALNHVAKHGKLDSELKKKLKVEWRHNLA 1080
VTYHCVRAGDMKSASETLNRLKSFPQCATLVAALNHVAKHGKLDSELKKKLKVEWRHNLA
Sbjct: 301 VTYHCVRAGDMKSASETLNRLKSFPQCATLVAALNHVAKHGKLDSELKKKLKVEWRHNLA 360
Query: 1081 HTKDKYKRXXXXXXXXXXXXXXXXXXXENWIWFKLYPLHVDPQLTDVLFKEVQKAVSVDY 1260
HTKDKYKR ENWIWFKLYPLHVDPQLTDVLFKEVQKAVSVDY
Sbjct: 361 HTKDKYKRALYAALLGGLDSAALADTLENWIWFKLYPLHVDPQLTDVLFKEVQKAVSVDY 420
Query: 1261 GEQYFMSNGPSEFQYFFTALWLSGQFERAIYLLHECGQRVDSVHVAVLAHKLGYLRMSKK 1440
GEQYFMSNGPSEFQYFFTALWLSGQFERAIYLLHECGQRVDSVHVAVLAHKLGYLRMSKK
Sbjct: 421 GEQYFMSNGPSEFQYFFTALWLSGQFERAIYLLHECGQRVDSVHVAVLAHKLGYLRMSKK 480
Query: 1441 STDEMLVVDQNDSTKCHLNLARLIVAYTKSFELVDVPRSLDYWFLLKGITTPTGSDVFEM 1620
STDEMLVVDQNDSTKCHLNLARLIVAYTKSFELVDVPRSLDYWFLLKGITTPTGSDVFEM
Sbjct: 481 STDEMLVVDQNDSTKCHLNLARLIVAYTKSFELVDVPRSLDYWFLLKGITTPTGSDVFEM 540
Query: 1621 AVSRSVYLTGQTDEILGKLTPDGRREKGLIDEYLDDPSEVICRVASDTEITGEWDQAVGL 1800
AVSRSVYLTGQTDEILGKLTPDGRREKGLIDEYLDDPSEVICRVASDTEITGEWDQAVGL
Sbjct: 541 AVSRSVYLTGQTDEILGKLTPDGRREKGLIDEYLDDPSEVICRVASDTEITGEWDQAVGL 600
Query: 1801 YLLASKPTNAAILLSSEISETLRTENKEKIADLVHVAEQFKKVQRGCQASEYATLSLLVD 1980
YLLASKPTNAAILLSSEISETLRTENKEKIADLVHVAEQFKKVQRGCQASEYATLSLLVD
Sbjct: 601 YLLASKPTNAAILLSSEISETLRTENKEKIADLVHVAEQFKKVQRGCQASEYATLSLLVD 660
Query: 1981 LAVLFDHCRNEEAEIAYGISTHLRLIPTEPDQVTVIVNEFHMVPQKVREVLPDMCLHLMK 2160
LAVLFDHCRNEEAEIAYGISTHLRLIPTEPDQVTVIVNEFHMVPQKVREVLPDMCLHLMK
Sbjct: 661 LAVLFDHCRNEEAEIAYGISTHLRLIPTEPDQVTVIVNEFHMVPQKVREVLPDMCLHLMK 720
Query: 2161 CLVDHCIRQSTTQANRGANSATTSMFSSSNRYVKQIKAIVLYSATVPYKFPTHVTSRLLQ 2340
CLVDHCIRQSTTQANRGANSATTSMFSSSNRYVKQIKAIVLYSATVPYKFPTHVTSRLLQ
Sbjct: 721 CLVDHCIRQSTTQANRGANSATTSMFSSSNRYVKQIKAIVLYSATVPYKFPTHVTSRLLQ 780
Query: 2341 LQASLGI 2361
LQASLGI
Sbjct: 781 LQASLGI 787
>gi|39589336|emb|CAE74365.1| Hypothetical protein CBG22089
[Caenorhabditis briggsae]
Length = 785
Score = 1299 bits (3361), Expect = 0.0
Identities = 641/786 (81%), Positives = 700/786 (88%)
Frame = +1
Query: 1 MLQFTEILGRVDHQGFAQLLANPIFQTNRVGQENSQQFTVRNGVEQELCGILGGSEGDWT 180
ML F EILGRVDHQG +L +FQ+ V + S FTVRNGVE ELCGILGGSEG+W
Sbjct: 1 MLHFEEILGRVDHQGLTKLFGASLFQSQDV--DTSHNFTVRNGVEHELCGILGGSEGNWQ 58
Query: 181 RQTHSVQKQMMFGERGIELPSRQPKSHTAEDTLTDEGVVDVPEAVMXXXXXXXXXXXXSR 360
R VQK+MMFGERGI++PSRQ ++H++E+T T++G+V++P+AV+ R
Sbjct: 59 RDAQPVQKKMMFGERGIQIPSRQAEAHSSEETFTEDGIVEIPQAVIDDIDEEELDEDILR 118
Query: 361 VKVETDRAFFNHMLLSRPAAVPMNPAQAMERDNLPFGGGKFVNKNISDRRELIFGDKLHK 540
VKVETDRAFFNHMLL+RPAAVPM PAQAMERD+LP G G FVNKNISDRREL+FGDKLHK
Sbjct: 119 VKVETDRAFFNHMLLARPAAVPMTPAQAMERDDLPTGNGTFVNKNISDRRELLFGDKLHK 178
Query: 541 FLKNQGKKSLVDLMKEAIDESGTDGALGDVWNDVTSVLNRKTSASRDDLTTTANLVEDAC 720
+LK+QGKKSLV+LMKEA++ESGTDGAL DVWNDVTSVLNRKT ASRDD+TTTANL+EDAC
Sbjct: 179 YLKSQGKKSLVELMKEAVEESGTDGALADVWNDVTSVLNRKTVASRDDVTTTANLLEDAC 238
Query: 721 KYLQAVFTEHMQTVVERNLEVAERGGIPGTRGLVNAFLKVGTEESFQPEDDSIDGMPTWQ 900
+YLQ VFT+HMQTVVERNLE+AERGGIPG RGLVNAFLKVGTEE FQPEDDSIDGMPTWQ
Sbjct: 239 RYLQKVFTDHMQTVVERNLEIAERGGIPGKRGLVNAFLKVGTEEPFQPEDDSIDGMPTWQ 298
Query: 901 VTYHCVRAGDMKSASETLNRLKSFPQCATLVAALNHVAKHGKLDSELKKKLKVEWRHNLA 1080
VTYHCVRAGDM++A+ETLNRLKSFPQCATLVA+LNHVAKH KLD+ELKKKLKVEWRHN+
Sbjct: 299 VTYHCVRAGDMQAAAETLNRLKSFPQCATLVASLNHVAKHKKLDAELKKKLKVEWRHNVG 358
Query: 1081 HTKDKYKRXXXXXXXXXXXXXXXXXXXENWIWFKLYPLHVDPQLTDVLFKEVQKAVSVDY 1260
HTKDKYKR ENWIWFKLYPLHVDPQLT +LF+EVQKAVS+DY
Sbjct: 359 HTKDKYKRALYAALLGGLESAALADTLENWIWFKLYPLHVDPQLTPLLFQEVQKAVSIDY 418
Query: 1261 GEQYFMSNGPSEFQYFFTALWLSGQFERAIYLLHECGQRVDSVHVAVLAHKLGYLRMSKK 1440
GEQYFMSNGPSEFQYFFTALWLSGQFERAIYLLHECGQRVDSVHVA+LAHKLGYLRMS K
Sbjct: 419 GEQYFMSNGPSEFQYFFTALWLSGQFERAIYLLHECGQRVDSVHVAILAHKLGYLRMSVK 478
Query: 1441 STDEMLVVDQNDSTKCHLNLARLIVAYTKSFELVDVPRSLDYWFLLKGITTPTGSDVFEM 1620
STDEMLVVD ND+TKCHLNLARLIVAYTK+FEL+DVPRSLDYWFLLKGI+TPTGSDVFEM
Sbjct: 479 STDEMLVVDPNDATKCHLNLARLIVAYTKNFELIDVPRSLDYWFLLKGISTPTGSDVFEM 538
Query: 1621 AVSRSVYLTGQTDEILGKLTPDGRREKGLIDEYLDDPSEVICRVASDTEITGEWDQAVGL 1800
AVSRSVYLTGQ D ILG LTPDGRREKGLIDEYLDDPSEVI RVASDTE+TGEWDQAV L
Sbjct: 539 AVSRSVYLTGQCDAILGTLTPDGRREKGLIDEYLDDPSEVINRVASDTELTGEWDQAVSL 598
Query: 1801 YLLASKPTNAAILLSSEISETLRTENKEKIADLVHVAEQFKKVQRGCQASEYATLSLLVD 1980
YLLASK TNAA LLSSEISETLR +NKEKI +LV VAEQFK+VQ+GCQA+EYATLSLLVD
Sbjct: 599 YLLASKSTNAAKLLSSEISETLRADNKEKIGELVTVAEQFKRVQKGCQAAEYATLSLLVD 658
Query: 1981 LAVLFDHCRNEEAEIAYGISTHLRLIPTEPDQVTVIVNEFHMVPQKVREVLPDMCLHLMK 2160
LAVLFDHCRN+ A+ AYG+ LRLIPTEPDQVTVIVNEFHMVPQKVREVLPDMCLHLMK
Sbjct: 659 LAVLFDHCRNDNADTAYGLVFDLRLIPTEPDQVTVIVNEFHMVPQKVREVLPDMCLHLMK 718
Query: 2161 CLVDHCIRQSTTQANRGANSATTSMFSSSNRYVKQIKAIVLYSATVPYKFPTHVTSRLLQ 2340
CLVDHCIRQST+ ANRGAN+A TSMFSSSNRYVKQIKAIVLYSATVPYKFPTHVTS+LLQ
Sbjct: 719 CLVDHCIRQSTSLANRGANAANTSMFSSSNRYVKQIKAIVLYSATVPYKFPTHVTSKLLQ 778
Query: 2341 LQASLG 2358
LQASLG
Sbjct: 779 LQASLG 784
>gi|25143583|ref|NP_740803.1| zebrafish dead eye like, Nuclear Pore
complex Protein NPP-13 (npp-13) [Caenorhabditis elegans]
gi|21913069|gb|AAM81101.1| Nuclear pore complex protein protein 13,
isoform b [Caenorhabditis elegans]
Length = 392
Score = 713 bits (1841), Expect = 0.0
Identities = 356/368 (96%), Positives = 356/368 (96%)
Frame = +1
Query: 1 MLQFTEILGRVDHQGFAQLLANPIFQTNRVGQENSQQFTVRNGVEQELCGILGGSEGDWT 180
MLQFTEILGRVDHQGFAQLLANPIFQTNRVGQENSQQFTVRNGVEQELCGILGGSEGDWT
Sbjct: 1 MLQFTEILGRVDHQGFAQLLANPIFQTNRVGQENSQQFTVRNGVEQELCGILGGSEGDWT 60
Query: 181 RQTHSVQKQMMFGERGIELPSRQPKSHTAEDTLTDEGVVDVPEAVMXXXXXXXXXXXXSR 360
RQTHSVQKQMMFGERGIELPSRQPKSHTAEDTLTDEGVVDVPEAVM SR
Sbjct: 61 RQTHSVQKQMMFGERGIELPSRQPKSHTAEDTLTDEGVVDVPEAVMDDIDEEELDEDISR 120
Query: 361 VKVETDRAFFNHMLLSRPAAVPMNPAQAMERDNLPFGGGKFVNKNISDRRELIFGDKLHK 540
VKVETDRAFFNHMLLSRPAAVPMNPAQAMERDNLPFGGGKFVNKNISDRRELIFGDKLHK
Sbjct: 121 VKVETDRAFFNHMLLSRPAAVPMNPAQAMERDNLPFGGGKFVNKNISDRRELIFGDKLHK 180
Query: 541 FLKNQGKKSLVDLMKEAIDESGTDGALGDVWNDVTSVLNRKTSASRDDLTTTANLVEDAC 720
FLKNQGKKSLVDLMKEAIDESGTDGALGDVWNDVTSVLNRKTSASRDDLTTTANLVEDAC
Sbjct: 181 FLKNQGKKSLVDLMKEAIDESGTDGALGDVWNDVTSVLNRKTSASRDDLTTTANLVEDAC 240
Query: 721 KYLQAVFTEHMQTVVERNLEVAERGGIPGTRGLVNAFLKVGTEESFQPEDDSIDGMPTWQ 900
KYLQAVFTEHMQTVVERNLEVAERGGIPGTRGLVNAFLKVGTEESFQPEDDSIDGMPTWQ
Sbjct: 241 KYLQAVFTEHMQTVVERNLEVAERGGIPGTRGLVNAFLKVGTEESFQPEDDSIDGMPTWQ 300
Query: 901 VTYHCVRAGDMKSASETLNRLKSFPQCATLVAALNHVAKHGKLDSELKKKLKVEWRHNLA 1080
VTYHCVRAGDMKSASETLNRLKSFPQCATLVAALNHVAKHGKLDSELKKKLKVEWRHNLA
Sbjct: 301 VTYHCVRAGDMKSASETLNRLKSFPQCATLVAALNHVAKHGKLDSELKKKLKVEWRHNLA 360
Query: 1081 HTKDKYKR 1104
HTKDKYKR
Sbjct: 361 HTKDKYKR 368
Score = 58.5 bits (140), Expect = 7e-07
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +3
Query: 1263 RAIFYVKWTIGISIFFHCSLAFWTI 1337
RAIFYVKWTIGISIFFHCSLAFWTI
Sbjct: 368 RAIFYVKWTIGISIFFHCSLAFWTI 392