Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= Y38H8A_7
         (819 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17543202|ref|NP_502600.1| putative protein (4O249) [Caenorhab...   538   e-152
gi|39587658|emb|CAE58596.1| Hypothetical protein CBG01763 [Caeno...   409   e-113
gi|38110219|gb|EAA55974.1| hypothetical protein MG01625.4 [Magna...    38   0.23
gi|7657353|ref|NP_056557.1| myosin IXb [Mus musculus] >gnl|BL_OR...    35   2.5
gi|14548121|sp|Q9QY06|MY9B_MOUSE Myosin IXb (Unconventional myos...    35   2.5
gi|25396304|pir||C88979 protein IFC-1 [imported] - Caenorhabditi...    34   4.3
gi|37359680|emb|CAE47761.1| SI:bZ1P14.4 (novel protein similar t...    34   4.3
gi|17562038|ref|NP_503783.1| intermediate Filament, C (55.9 kD) ...    34   4.3
gi|14249254|ref|NP_116069.1| hypothetical protein MGC4266 [Homo ...    33   5.7
gi|38142253|dbj|BAD00929.1| penicillin-binding protein 2X [Strep...    33   5.7
gi|22788769|ref|NP_690481.1| stress-induced protein STI1 [Heliot...    33   7.4
gi|39590757|emb|CAE65129.1| Hypothetical protein CBG09994 [Caeno...    33   7.4
gi|17554308|ref|NP_499170.1| DNA replication licensing factor Mi...    33   9.7
gi|48094822|ref|XP_392195.1| similar to ENSANGP00000005621 [Apis...    33   9.7
gi|6981244|ref|NP_037116.1| Unconventional myosin from rat 3; my...    33   9.7
gi|30249658|ref|NP_841728.1| conserved hypothetical protein [Nit...    33   9.7
gi|482170|pir||S40933 probable replication licensing factor MCM6...    33   9.7
gi|50254624|gb|EAL17372.1| hypothetical protein CNBN0020 [Crypto...    33   9.7


>gi|17543202|ref|NP_502600.1| putative protein (4O249)
           [Caenorhabditis elegans]
 gi|7509659|pir||T26719 hypothetical protein Y38H8A.1 -
           Caenorhabditis elegans
 gi|3880808|emb|CAA16348.1| Hypothetical protein Y38H8A.1
           [Caenorhabditis elegans]
          Length = 272

 Score =  538 bits (1386), Expect = e-152
 Identities = 262/272 (96%), Positives = 262/272 (96%)
 Frame = +1

Query: 1   MHHFIHSVLVVMFLNSFVLFVAACMKTIPTEAASISAQLDNVPLRRMPVLNAQDDYSSHI 180
           MHHFIHSVLVVMFLNSFVLFVAACMKTIPTEAASISAQLDNVPLRRMPVLNAQDDYSSHI
Sbjct: 1   MHHFIHSVLVVMFLNSFVLFVAACMKTIPTEAASISAQLDNVPLRRMPVLNAQDDYSSHI 60

Query: 181 QQFRQAKTFPSPQPTEPLATVDXXXXXXXXXXTTDKTVDPPRISNREPSHAKTFAVKTDT 360
           QQFRQAKTFPSPQPTEPLATVD          TTDKTVDPPRISNREPSHAKTFAVKTDT
Sbjct: 61  QQFRQAKTFPSPQPTEPLATVDSAAASAASASTTDKTVDPPRISNREPSHAKTFAVKTDT 120

Query: 361 RSEKSKIEEKTSRDEGSNNVHNDRDLFEALQVEKPDICGSCPPIWMKNTAEMKDICSNHE 540
           RSEKSKIEEKTSRDEGSNNVHNDRDLFEALQVEKPDICGSCPPIWMKNTAEMKDICSNHE
Sbjct: 121 RSEKSKIEEKTSRDEGSNNVHNDRDLFEALQVEKPDICGSCPPIWMKNTAEMKDICSNHE 180

Query: 541 SVSAFFSMTMDRRDAQNVVDSSDVKECTRTIVCSEPHMLVKWHESELCDVHAPSTGSLIS 720
           SVSAFFSMTMDRRDAQNVVDSSDVKECTRTIVCSEPHMLVKWHESELCDVHAPSTGSLIS
Sbjct: 181 SVSAFFSMTMDRRDAQNVVDSSDVKECTRTIVCSEPHMLVKWHESELCDVHAPSTGSLIS 240

Query: 721 DISNTFIYKCNGTQWTLHGFPLSSVVCAVGAS 816
           DISNTFIYKCNGTQWTLHGFPLSSVVCAVGAS
Sbjct: 241 DISNTFIYKCNGTQWTLHGFPLSSVVCAVGAS 272




[DB home][top]