Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= Y39G8C_1
(1065 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17536667|ref|NP_496944.1| pm10982402 : related to human and m... 534 e-150
gi|39591342|emb|CAE73395.1| Hypothetical protein CBG20836 [Caeno... 444 e-123
gi|7509722|pir||T26773 hypothetical protein Y39G8C.a - Caenorhab... 166 6e-40
gi|25814809|gb|AAN75632.1| Smad1 antagonistic effector [Xenopus ... 55 4e-06
gi|29335751|dbj|BAC66442.1| nuclear membrane protein XMAN1 [Xeno... 55 4e-06
gi|34865682|ref|XP_216900.2| similar to inner nuclear membrane p... 51 4e-05
gi|34852233|ref|XP_342101.1| similar to hypothetical protein MGC... 51 5e-05
gi|50299531|gb|AAT71319.1| LEM domain containing 2 [Mus musculus] 51 5e-05
gi|22122563|ref|NP_666187.1| cDNA sequence BC026588 [Mus musculu... 51 5e-05
gi|31044432|ref|NP_851853.1| hypothetical protein LOC221496 [Hom... 51 5e-05
gi|8132534|gb|AAF73293.1| inner nuclear membrane protein [Homo s... 50 9e-05
gi|7706607|ref|NP_055134.2| integral inner nuclear membrane prot... 50 9e-05
gi|50760459|ref|XP_418032.1| PREDICTED: hypothetical protein XP_... 49 2e-04
gi|50728292|ref|XP_416073.1| PREDICTED: similar to Inner nuclear... 46 0.002
gi|47226305|emb|CAG09273.1| unnamed protein product [Tetraodon n... 42 0.031
gi|47220375|emb|CAF98474.1| unnamed protein product [Tetraodon n... 40 0.12
gi|6649242|gb|AAF21439.1| splicing coactivator subunit SRm300 [H... 39 0.16
gi|5821143|dbj|BAA83713.1| RNA binding protein [Homo sapiens] 39 0.16
gi|19923466|ref|NP_057417.2| splicing coactivator subunit SRm300... 39 0.16
gi|5821145|dbj|BAA83714.1| RNA binding protein [Homo sapiens] 39 0.16
gi|47124032|gb|AAH70050.1| SRRM2 protein [Homo sapiens] 39 0.16
gi|47217980|emb|CAG02263.1| unnamed protein product [Tetraodon n... 37 0.59
gi|31198939|ref|XP_308417.1| ENSANGP00000009456 [Anopheles gambi... 37 0.77
gi|47229936|emb|CAG10350.1| unnamed protein product [Tetraodon n... 37 1.0
gi|47217213|emb|CAF96736.1| unnamed protein product [Tetraodon n... 37 1.0
gi|47087423|ref|NP_998607.1| zgc:63802 [Danio rerio] >gnl|BL_ORD... 36 1.3
gi|46358331|ref|NP_080752.1| RIKEN cDNA 2610101N10 [Mus musculus... 36 1.7
gi|31241985|ref|XP_321423.1| ENSANGP00000022114 [Anopheles gambi... 36 1.7
gi|38090001|ref|XP_135073.3| RIKEN cDNA 2610101N10 [Mus musculus] 36 1.7
gi|50734082|ref|XP_418966.1| PREDICTED: similar to serine/threon... 36 1.7
gi|34865480|ref|XP_236501.2| similar to CG9346-PA [Rattus norveg... 36 1.7
gi|46227142|gb|EAK88092.1| hypothetical protein cgd5_1590 [Crypt... 36 1.7
gi|34541022|ref|NP_905501.1| NAD(P) transhydrogenase, beta subun... 36 1.7
gi|49204551|dbj|BAD24703.1| transformer-2b4 [Oryzias latipes] 35 2.3
gi|50257162|gb|EAL19875.1| hypothetical protein CNBG0180 [Crypto... 35 2.3
gi|47223384|emb|CAG04245.1| unnamed protein product [Tetraodon n... 35 2.9
gi|13541409|ref|NP_111097.1| FKBP-type peptidyl-prolyl cis-trans... 35 2.9
gi|17543644|ref|NP_500025.1| RNA-binding region containing 2 lik... 35 3.8
gi|17555296|ref|NP_499069.1| DEAD box (54.2 kD) (3K494) [Caenorh... 35 3.8
gi|13623693|gb|AAH06474.1| Unknown (protein for IMAGE:2820942) [... 34 5.0
gi|13475932|ref|NP_107502.1| unknown protein [Mesorhizobium loti... 34 5.0
gi|2224605|dbj|BAA20790.1| KIAA0332 [Homo sapiens] >gnl|BL_ORD_I... 34 5.0
gi|37550559|ref|XP_031553.7| U2-associated SR140 protein [Homo s... 34 5.0
gi|11360021|pir||T46377 hypothetical protein DKFZp434G1919.1 - h... 34 5.0
gi|6634015|dbj|BAA20782.2| KIAA0324 protein [Homo sapiens] 34 6.6
gi|34856367|ref|XP_342718.1| similar to putative nucleic acid bi... 34 6.6
gi|39598251|emb|CAE68943.1| Hypothetical protein CBG14923 [Caeno... 34 6.6
gi|34914692|ref|NP_918693.1| P0560B06.7 [Oryza sativa (japonica ... 34 6.6
gi|7512967|pir||T02345 hypothetical protein KIAA0324 - human (fr... 34 6.6
gi|50369257|gb|AAH75873.1| Unknown (protein for MGC:92059) [Dani... 34 6.6
gi|47213939|emb|CAF94470.1| unnamed protein product [Tetraodon n... 34 6.6
gi|5821151|dbj|BAA83717.1| RNA binding protein [Homo sapiens] 34 6.6
gi|49204538|dbj|BAD24701.1| transformer-2b2 [Oryzias latipes] 33 8.6
gi|49204567|dbj|BAD24706.1| transformer-2b7 [Oryzias latipes] 33 8.6
gi|49204543|dbj|BAD24702.1| transformer-2b3 [Oryzias latipes] 33 8.6
gi|46445744|ref|YP_007109.1| conserved hypothetical protein [Par... 33 8.6
gi|49256520|gb|AAH74295.1| Unknown (protein for MGC:84092) [Xeno... 33 8.6
>gi|17536667|ref|NP_496944.1| pm10982402 : related to human and mouse
MAN1, a component of the nuclear membrane, LEM domain
protein (lem-2) [Caenorhabditis elegans]
gi|46576672|sp|Q9XTB5|LEM2_CAEEL LEM protein 2 (Ce-MAN1) (MAN1
homolog)
gi|7508784|pir||T26067 hypothetical protein W01G7.5 - Caenorhabditis
elegans
gi|3880906|emb|CAA21599.1| C. elegans LEM-2 protein (corresponding
sequence W01G7.5) [Caenorhabditis elegans]
gi|3924903|emb|CAB03457.1| Hypothetical protein W01G7.5
[Caenorhabditis elegans]
Length = 500
Score = 534 bits (1376), Expect = e-150
Identities = 273/354 (77%), Positives = 273/354 (77%)
Frame = +1
Query: 1 PVSSTPNKRLSPVYKPSPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPGLITDFT 180
PVSSTPNKRLSPVYKPSPV VPGLITDFT
Sbjct: 147 PVSSTPNKRLSPVYKPSPVPKNTPRTTSSSSKTTINTTTTRIPSTPRRITSVPGLITDFT 206
Query: 181 PSFSTFGSDRPGATPPRKSIYTSKVSKVLHXXXXXXXXXXXXXXXXXXXXSRIIYKTEEP 360
PSFSTFGSDRPGATPPRKSIYTSKVSKVLH SRIIYKTEEP
Sbjct: 207 PSFSTFGSDRPGATPPRKSIYTSKVSKVLHDLGNTTGEEDDDDEFEGQETSRIIYKTEEP 266
Query: 361 SRRGIVKNAWNKVLGYGFDASKNPGDSYDLRAGASRIRVQKNPRTGKVTVKQTNIFNEAI 540
SRRGIVKNAWNKVLGYGFDASKNPGDSYDLRAGASRIRVQKNPRTGKVTVKQTNIFNEAI
Sbjct: 267 SRRGIVKNAWNKVLGYGFDASKNPGDSYDLRAGASRIRVQKNPRTGKVTVKQTNIFNEAI 326
Query: 541 YFALYVILILFVVLGIAYALTTTHRPKTADFSGYWGVLKAAGRDSLNFFYNYAILPVVSL 720
YFALYVILILFVVLGIAYALTTTHRPKTADFSGYWGVLKAAGRDSLNFFYNYAILPVVSL
Sbjct: 327 YFALYVILILFVVLGIAYALTTTHRPKTADFSGYWGVLKAAGRDSLNFFYNYAILPVVSL 386
Query: 721 GIFVVLGAGIYFGHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDPYVSQPHVRDVLF 900
GIFVVLGAGIYFGHR DGDPYVSQPHVRDVLF
Sbjct: 387 GIFVVLGAGIYFGHRKYKEAKEQEEAKLYELIERITELIRESSIDGDPYVSQPHVRDVLF 446
Query: 901 PPAKRRSAELARWEQAVKFIDTNESRVATDVLVLPSGNECAVWKWIGNQSQKRW 1062
PPAKRRSAELARWEQAVKFIDTNESRVATDVLVLPSGNECAVWKWIGNQSQKRW
Sbjct: 447 PPAKRRSAELARWEQAVKFIDTNESRVATDVLVLPSGNECAVWKWIGNQSQKRW 500