Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= Y41C4A_15
         (837 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17555850|ref|NP_499519.1| putative protein (31.6 kD) (3M814) ...   502   e-141
gi|32565620|ref|NP_871699.1| putative protein (3M814) [Caenorhab...   464   e-130
gi|39584772|emb|CAE67667.1| Hypothetical protein CBG13230 [Caeno...   406   e-112
gi|16082148|ref|NP_394586.1| conserved hypothetical protein [The...    35   2.0
gi|33335438|gb|AAQ12658.1| BexD [Haemophilus influenzae]               35   2.0
gi|18976713|ref|NP_578070.1| hypothetical protein PF0341 [Pyroco...    33   5.9
gi|28898214|ref|NP_797819.1| hypothetical protein VP1440 [Vibrio...    33   5.9
gi|19922232|ref|NP_610941.1| CG8479-PB [Drosophila melanogaster]...    33   5.9
gi|15641387|ref|NP_231019.1| hypothetical protein VC1375 [Vibrio...    33   7.7


>gi|17555850|ref|NP_499519.1| putative protein (31.6 kD) (3M814)
           [Caenorhabditis elegans]
 gi|6580295|emb|CAB63358.1| Hypothetical protein Y41C4A.12a
           [Caenorhabditis elegans]
          Length = 278

 Score =  502 bits (1292), Expect = e-141
 Identities = 260/278 (93%), Positives = 260/278 (93%)
 Frame = -1

Query: 837 MKRIQEIQQNLERLAEMDEHLEQCEEWNVVAQEIVQKLSTIRKEVERXXXXXXXXXXXXX 658
           MKRIQEIQQNLERLAEMDEHLEQCEEWNVVAQEIVQKLSTIRKEVER
Sbjct: 1   MKRIQEIQQNLERLAEMDEHLEQCEEWNVVAQEIVQKLSTIRKEVERSAAPTPLLLTPPG 60

Query: 657 XXXXXSIYSDISSEMTNVYTEAVEAYDQQIYSRCVRLVEGANRESPVDMCLISLAHHSYA 478
                SIYSDISSEMTNVYTEAVEAYDQQIYSRCVRLVEGANRESPVDMCLISLAHHSYA
Sbjct: 61  SCGSGSIYSDISSEMTNVYTEAVEAYDQQIYSRCVRLVEGANRESPVDMCLISLAHHSYA 120

Query: 477 EMVNAASGSDDAMKFAKWWAEFLDSVEAGRGHSEKIELLDYEAVAYEKIVKLGGVADVEK 298
           EMVNAASGSDDAMKFAKWWAEFLDSVEAGRGHSEKIELLDYEAVAYEKIVKLGGVADVEK
Sbjct: 121 EMVNAASGSDDAMKFAKWWAEFLDSVEAGRGHSEKIELLDYEAVAYEKIVKLGGVADVEK 180

Query: 297 LIEVVVRSYEMVTLLNRPYHILSLQKLFRLTNVLSSSEVDLESDAFSSAKTVVLTGIQNV 118
           LIEVVVRSYEMVTLLNRPYHILSLQKLFRLTNVLSSSEVDLESDAFSSAKTVVLTGIQNV
Sbjct: 181 LIEVVVRSYEMVTLLNRPYHILSLQKLFRLTNVLSSSEVDLESDAFSSAKTVVLTGIQNV 240

Query: 117 LRDRKKFAQLGKFNEHNMKIAMRRTAQPDFRVRYCEKR 4
           LRDRKKFAQLGKFNEHNMKIAMRRTAQPDFRVRYCEKR
Sbjct: 241 LRDRKKFAQLGKFNEHNMKIAMRRTAQPDFRVRYCEKR 278




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